View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13108_low_34 (Length: 239)
Name: NF13108_low_34
Description: NF13108
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13108_low_34 |
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Alignment Details
Target: chr1 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 19 - 231
Target Start/End: Complemental strand, 45293127 - 45292915
Alignment:
| Q |
19 |
gctcattattaccacctcccatcatgaatctaaacccaactttctgcaatccaaactcagcaaactgcaatagaggcatccttttatgatcatgtccctt |
118 |
Q |
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| T |
45293127 |
gctcattattaccacctcccatcatgaatctaaacccaactttctgcaatccaaactcagcaaactgcaatagaggcatccttttatgatcatgtccctt |
45293028 |
T |
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| Q |
119 |
tattttcttctccaatgcttctttctccaacaaagcaaccctaagcaagttattgatatccctattctcttcagttaagcttatcaaactattctccaac |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45293027 |
tattttcttctccaatgcttctttctccaacaaagcaaccctaagcaagttattgatatccctattctcttcagttaagcttatcaaactattctccaac |
45292928 |
T |
|
| Q |
219 |
tctctctgctcct |
231 |
Q |
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||||||| ||||| |
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| T |
45292927 |
tctctcttctcct |
45292915 |
T |
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