View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13108_low_35 (Length: 239)
Name: NF13108_low_35
Description: NF13108
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13108_low_35 |
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Alignment Details
Target: chr5 (Bit Score: 164; Significance: 9e-88; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 164; E-Value: 9e-88
Query Start/End: Original strand, 4 - 230
Target Start/End: Original strand, 14705266 - 14705492
Alignment:
| Q |
4 |
cccaaaccttcatacgagggactcaaaatcatgaatgaagaaaaataggagtaccaagaaaatttttaagtcaattatagnnnnnnnnnagggacattgc |
103 |
Q |
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| T |
14705266 |
cccaaatcttaatacgagagacttaaaatcatgaatgaagaaaaataggagtaccaagaatttttttaagtcaattatagtttttttttagggacattgc |
14705365 |
T |
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| Q |
104 |
cctttgacacagctttgcatcacacaaactaaactaaaaagttattaacataagttgcaccttgcaccataattgatccagaacagaaaataaaactaaa |
203 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||| |
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| T |
14705366 |
cctttgacacagctttgcatcacacaaactaaactaaaaagttattaacataagttgcaccttacaccataattgatccagaacagaaactaaaactaaa |
14705465 |
T |
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| Q |
204 |
actgcttgttataacacaatttgatga |
230 |
Q |
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|||||||||||||||||||||| |||| |
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| T |
14705466 |
actgcttgttataacacaatttaatga |
14705492 |
T |
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