View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13109_high_30 (Length: 272)

Name: NF13109_high_30
Description: NF13109
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13109_high_30
NF13109_high_30
[»] chr7 (16 HSPs)
chr7 (30-272)||(14610194-14610436)
chr7 (30-272)||(12856619-12856861)
chr7 (30-272)||(26050851-26051093)
chr7 (30-272)||(26060210-26060452)
chr7 (30-272)||(26055964-26056206)
chr7 (30-272)||(26065323-26065565)
chr7 (30-272)||(12851504-12851746)
chr7 (30-272)||(35352423-35352665)
chr7 (30-272)||(11056455-11056697)
chr7 (19-270)||(4181503-4181753)
chr7 (62-265)||(5436694-5436898)
chr7 (19-222)||(37459962-37460165)
chr7 (162-272)||(14615260-14615370)
chr7 (19-100)||(5440409-5440490)
chr7 (19-100)||(5449419-5449500)
chr7 (112-175)||(12239603-12239666)
[»] chr4 (17 HSPs)
chr4 (19-272)||(32429404-32429658)
chr4 (30-272)||(35095858-35096100)
chr4 (30-272)||(35090745-35090987)
chr4 (19-272)||(18716316-18716572)
chr4 (19-272)||(34279612-34279865)
chr4 (30-272)||(30019982-30020224)
chr4 (19-272)||(18736989-18737245)
chr4 (21-272)||(3424823-3425074)
chr4 (19-272)||(18670671-18670923)
chr4 (19-267)||(54859278-54859525)
chr4 (19-272)||(47071239-47071491)
chr4 (79-272)||(3415333-3415526)
chr4 (19-201)||(34128358-34128540)
chr4 (113-272)||(14646483-14646642)
chr4 (30-116)||(14643862-14643948)
chr4 (19-74)||(34602066-34602121)
chr4 (21-77)||(3409721-3409781)
[»] chr1 (20 HSPs)
chr1 (14-272)||(19310655-19310912)
chr1 (30-272)||(28598139-28598381)
chr1 (30-272)||(3465303-3465545)
chr1 (30-272)||(28574127-28574369)
chr1 (19-272)||(13654165-13654420)
chr1 (19-272)||(43358581-43358836)
chr1 (25-272)||(1187658-1187905)
chr1 (33-272)||(16051036-16051275)
chr1 (19-271)||(10186700-10186949)
chr1 (19-272)||(44524143-44524392)
chr1 (62-265)||(48366215-48366419)
chr1 (62-265)||(29681427-29681630)
chr1 (30-159)||(3468010-3468139)
chr1 (19-134)||(35626140-35626255)
chr1 (142-272)||(35624847-35624977)
chr1 (19-100)||(17414657-17414738)
chr1 (104-232)||(17415391-17415519)
chr1 (19-91)||(21431793-21431865)
chr1 (151-272)||(21431918-21432040)
chr1 (41-200)||(3696450-3696605)
[»] chr8 (12 HSPs)
chr8 (30-272)||(14318747-14318989)
chr8 (30-272)||(26982008-26982250)
chr8 (30-272)||(14315043-14315285)
chr8 (30-272)||(34108059-34108301)
chr8 (30-272)||(26987121-26987363)
chr8 (30-272)||(43956981-43957223)
chr8 (19-272)||(10341078-10341330)
chr8 (19-272)||(18608749-18609002)
chr8 (19-272)||(25953280-25953533)
chr8 (30-267)||(18884899-18885136)
chr8 (30-117)||(18494308-18494395)
chr8 (23-72)||(1781869-1781918)
[»] chr6 (11 HSPs)
chr6 (30-272)||(21275603-21275845)
chr6 (19-272)||(24508949-24509202)
chr6 (30-272)||(20752250-20752492)
chr6 (19-272)||(24509533-24509786)
chr6 (31-272)||(21937400-21937641)
chr6 (19-272)||(21936801-21937054)
chr6 (19-270)||(2887326-2887573)
chr6 (19-270)||(2889048-2889295)
chr6 (19-216)||(11183287-11183484)
chr6 (204-272)||(12909459-12909527)
chr6 (204-272)||(12934566-12934634)
[»] chr5 (11 HSPs)
chr5 (30-272)||(39903675-39903917)
chr5 (30-272)||(39908788-39909030)
chr5 (30-272)||(9872556-9872798)
chr5 (30-272)||(9877671-9877913)
chr5 (30-272)||(2022793-2023036)
chr5 (30-272)||(13556437-13556679)
chr5 (19-272)||(35369012-35369279)
chr5 (30-272)||(25183924-25184164)
chr5 (48-272)||(43378267-43378491)
chr5 (30-232)||(4555522-4555725)
chr5 (20-67)||(43540881-43540928)
[»] chr3 (23 HSPs)
chr3 (30-272)||(4049637-4049879)
chr3 (30-272)||(5458144-5458386)
chr3 (30-272)||(5481620-5481862)
chr3 (30-272)||(8458141-8458383)
chr3 (30-272)||(10673070-10673312)
chr3 (30-272)||(10678185-10678427)
chr3 (30-272)||(1302377-1302619)
chr3 (30-272)||(6853084-6853326)
chr3 (30-272)||(8464580-8464822)
chr3 (30-272)||(10591427-10591669)
chr3 (30-272)||(6858187-6858429)
chr3 (30-272)||(31076534-31076776)
chr3 (30-272)||(31081639-31081881)
chr3 (30-272)||(4054771-4055013)
chr3 (30-272)||(33702732-33702974)
chr3 (30-272)||(33703130-33703371)
chr3 (19-272)||(29827258-29827507)
chr3 (19-272)||(20890891-20891142)
chr3 (102-272)||(10586386-10586556)
chr3 (19-234)||(3187575-3187788)
chr3 (19-217)||(49784378-49784579)
chr3 (19-201)||(18024269-18024450)
chr3 (30-106)||(10584990-10585066)
[»] chr2 (9 HSPs)
chr2 (30-272)||(17720658-17720900)
chr2 (30-272)||(45120216-45120458)
chr2 (30-272)||(14917514-14917756)
chr2 (19-266)||(30283562-30283809)
chr2 (14-272)||(16284266-16284526)
chr2 (30-272)||(42780013-42780256)
chr2 (19-139)||(716230-716350)
chr2 (150-272)||(39196124-39196246)
chr2 (243-272)||(716191-716220)
[»] scaffold0006 (1 HSPs)
scaffold0006 (19-272)||(143926-144181)
[»] scaffold0223 (2 HSPs)
scaffold0223 (30-214)||(2151-2335)
scaffold0223 (167-272)||(7246-7351)
[»] scaffold0391 (1 HSPs)
scaffold0391 (139-272)||(16437-16570)
[»] scaffold0005 (2 HSPs)
scaffold0005 (113-272)||(170648-170807)
scaffold0005 (30-116)||(173344-173430)


Alignment Details
Target: chr7 (Bit Score: 191; Significance: 1e-104; HSPs: 16)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 30 - 272
Target Start/End: Complemental strand, 14610436 - 14610194
Alignment:
Q  30 ttctcttactctaaatcatccatcaattctcgaatgcatgagtgaattgctggaaccataaatctgtaaaacactgttaggagatacgcttggtgtggtt 129  Q
    |||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  14610436 ttctcttattctaaatcatccatcaattctctaatgcatgagtgaattgctggaaccataaatctgtaaaatactgttaggagatacgcttggtgtggtt 14610337  T
Q  130 gtgcaatacacgtcaaggagctcatagtatactgaaggggattcgctggtcattcctattgcatccaatatagagttattggtgggggcgaatcgaacct 229  Q
    ||||||||||||||||| | |||||||||| ||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||    
T  14610336 gtgcaatacacgtcaagaaactcatagtatcctgaaggggattcgctggtcattcctattgcatccaatatacatttattggtgggggcgaatcgaacct 14610237  T
Q  230 aaaggatggcgttgcaaccccatgcgctttgagttttacatgc 272  Q
    ||||| | | || |||||||||| |||||||||||||||||||    
T  14610236 aaaggttagtgtggcaaccccatacgctttgagttttacatgc 14610194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 30 - 272
Target Start/End: Complemental strand, 12856861 - 12856619
Alignment:
Q  30 ttctcttactctaaatcatccatcaattctcgaatgcatgagtgaattgctggaaccataaatctgtaaaacactgttaggagatacgcttggtgtggtt 129  Q
    |||| ||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  12856861 ttctattattctaaatcatccatcaattctctaatgcatgagtgaattgctggaaccataaatctgtaaaatactgttaggagatacgcttggtgtggtt 12856762  T
Q  130 gtgcaatacacgtcaaggagctcatagtatactgaaggggattcgctggtcattcctattgcatccaatatagagttattggtgggggcgaatcgaacct 229  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||||||||||||| | |||||||||||||||||||||||||    
T  12856761 gtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtgggggcgaatcgaacct 12856662  T
Q  230 aaaggatggcgttgcaaccccatgcgctttgagttttacatgc 272  Q
    ||||| | | || |||||||||| |||||||||||||||||||    
T  12856661 aaaggttagtgtggcaaccccatacgctttgagttttacatgc 12856619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 30 - 272
Target Start/End: Complemental strand, 26051093 - 26050851
Alignment:
Q  30 ttctcttactctaaatcatccatcaattctcgaatgcatgagtgaattgctggaaccataaatctgtaaaacactgttaggagatacgcttggtgtggtt 129  Q
    |||| ||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  26051093 ttctattattctaaatcatccatcaattctctaatgcatgagtgaattgctggaaccataaatctgtaaaatactgttaggagatacgcttggtgtggtt 26050994  T
Q  130 gtgcaatacacgtcaaggagctcatagtatactgaaggggattcgctggtcattcctattgcatccaatatagagttattggtgggggcgaatcgaacct 229  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||||||||||||| | |||||||||||||||||||||||||    
T  26050993 gtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtgggggcgaatcgaacct 26050894  T
Q  230 aaaggatggcgttgcaaccccatgcgctttgagttttacatgc 272  Q
    ||||| | | || |||||||||| |||||||||||||||||||    
T  26050893 aaaggttagtgtggcaaccccatacgctttgagttttacatgc 26050851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 30 - 272
Target Start/End: Complemental strand, 26060452 - 26060210
Alignment:
Q  30 ttctcttactctaaatcatccatcaattctcgaatgcatgagtgaattgctggaaccataaatctgtaaaacactgttaggagatacgcttggtgtggtt 129  Q
    |||| ||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  26060452 ttctattattctaaatcatccatcaattctctaatgcatgagtgaattgctggaaccataaatctgtaaaatactgttaggagatacgcttggtgtggtt 26060353  T
Q  130 gtgcaatacacgtcaaggagctcatagtatactgaaggggattcgctggtcattcctattgcatccaatatagagttattggtgggggcgaatcgaacct 229  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||||||||||||| | |||||||||||||||||||||||||    
T  26060352 gtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtgggggcgaatcgaacct 26060253  T
Q  230 aaaggatggcgttgcaaccccatgcgctttgagttttacatgc 272  Q
    ||||| | | || |||||||||| |||||||||||||||||||    
T  26060252 aaaggttagtgtggcaaccccatacgctttgagttttacatgc 26060210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 183; E-Value: 5e-99
Query Start/End: Original strand, 30 - 272
Target Start/End: Complemental strand, 26056206 - 26055964
Alignment:
Q  30 ttctcttactctaaatcatccatcaattctcgaatgcatgagtgaattgctggaaccataaatctgtaaaacactgttaggagatacgcttggtgtggtt 129  Q
    |||| ||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  26056206 ttctattattctaaatcatccatcaattctctaatgcatgagtgaattgctggaaccataaatctgtaaaatactgttaggagatacgcttggtgtggtt 26056107  T
Q  130 gtgcaatacacgtcaaggagctcatagtatactgaaggggattcgctggtcattcctattgcatccaatatagagttattggtgggggcgaatcgaacct 229  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||||||||||||| | |||||||||||||||||||||||||    
T  26056106 gtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtgggggcgaatcgaacct 26056007  T
Q  230 aaaggatggcgttgcaaccccatgcgctttgagttttacatgc 272  Q
    ||||| | | || |||||| ||| |||||||||||||||||||    
T  26056006 aaaggttagtgtggcaacctcatacgctttgagttttacatgc 26055964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 183; E-Value: 5e-99
Query Start/End: Original strand, 30 - 272
Target Start/End: Complemental strand, 26065565 - 26065323
Alignment:
Q  30 ttctcttactctaaatcatccatcaattctcgaatgcatgagtgaattgctggaaccataaatctgtaaaacactgttaggagatacgcttggtgtggtt 129  Q
    |||| ||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  26065565 ttctattattctaaatcatccatcaattctctaatgcatgagtgaattgctggaaccataaatctgtaaaatactgttaggagatacgcttggtgtggtt 26065466  T
Q  130 gtgcaatacacgtcaaggagctcatagtatactgaaggggattcgctggtcattcctattgcatccaatatagagttattggtgggggcgaatcgaacct 229  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||||||||||||| | |||||||||||||||||||||||||    
T  26065465 gtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtgggggcgaatcgaacct 26065366  T
Q  230 aaaggatggcgttgcaaccccatgcgctttgagttttacatgc 272  Q
    ||||| | | || |||||| ||| |||||||||||||||||||    
T  26065365 aaaggttagtgtggcaacctcatacgctttgagttttacatgc 26065323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 171; E-Value: 7e-92
Query Start/End: Original strand, 30 - 272
Target Start/End: Complemental strand, 12851746 - 12851504
Alignment:
Q  30 ttctcttactctaaatcatccatcaattctcgaatgcatgagtgaattgctggaaccataaatctgtaaaacactgttaggagatacgcttggtgtggtt 129  Q
    |||| ||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  12851746 ttctattattctaaatcatccatcaattctctaatgcatgagtgaattgctggaaccataaatctgtaaaatactgttaggagatacgcttggtgtggtt 12851647  T
Q  130 gtgcaatacacgtcaaggagctcatagtatactgaaggggattcgctggtcattcctattgcatccaatatagagttattggtgggggcgaatcgaacct 229  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||  ||||||||||||||||||||||||| | ||||||||| |  ||||||||||||    
T  12851646 gtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgtcggtcattcctattgcatccaatatacatttattggtgtgttcgaatcgaacct 12851547  T
Q  230 aaaggatggcgttgcaaccccatgcgctttgagttttacatgc 272  Q
    ||||| | | || |||||||||| |||||||||||||||||||    
T  12851546 aaaggttagtgtggcaaccccatacgctttgagttttacatgc 12851504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 30 - 272
Target Start/End: Original strand, 35352423 - 35352665
Alignment:
Q  30 ttctcttactctaaatcatccatcaattctcgaatgcatgagtgaattgctggaaccataaatctgtaaaacactgttaggagatacgcttggtgtggtt 129  Q
    |||||||||| |||| ||||||||||||||| ||||||||||||||||||||||||||||||||| ||||| ||||||||||| ||| |||| |||||||    
T  35352423 ttctcttactataaaccatccatcaattctctaatgcatgagtgaattgctggaaccataaatctataaaatactgttaggagttactcttgatgtggtt 35352522  T
Q  130 gtgcaatacacgtcaaggagctcatagtatactgaaggggattcgctggtcattcctattgcatccaatatagagttattggtgggggcgaatcgaacct 229  Q
    ||||||||||| ||| ||| |||||||||| |||||| |||||||||||||||||||||||||||||||||| | |||||||||||||||||| ||||||    
T  35352523 gtgcaatacacatcatggaactcatagtatcctgaagaggattcgctggtcattcctattgcatccaatatacaattattggtgggggcgaattgaacct 35352622  T
Q  230 aaaggatggcgttgcaaccccatgcgctttgagttttacatgc 272  Q
    ||||| | | || | ||||||||||||||||||||||||||||    
T  35352623 aaaggttagtgtggtaaccccatgcgctttgagttttacatgc 35352665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 30 - 272
Target Start/End: Complemental strand, 11056697 - 11056455
Alignment:
Q  30 ttctcttactctaaatcatccatcaattctcgaatgcatgagtgaattgctggaaccataaatctgtaaaacactgttaggagatacgcttggtgtggtt 129  Q
    |||||||||| |||||||||||||||||||  ||||||||||||||||| ||||||||||||||||||||| ||| |||||||||||| |||||||| ||    
T  11056697 ttctcttactttaaatcatccatcaattctttaatgcatgagtgaattgttggaaccataaatctgtaaaatactattaggagatacgtttggtgtgatt 11056598  T
Q  130 gtgcaatacacgtcaaggagctcatagtatactgaaggggattcgctggtcattcctattgcatccaatatagagttattggtgggggcgaatcgaacct 229  Q
    |||||| |||||||||||| |||||||||| ||||||||||||||  |||||||| |||||||||||||||| |||||||||||||||||||||  || |    
T  11056597 gtgcaacacacgtcaaggaactcatagtatcctgaaggggattcgtcggtcattcatattgcatccaatatacagttattggtgggggcgaatcacacat 11056498  T
Q  230 aaaggatggcgttgcaaccccatgcgctttgagttttacatgc 272  Q
    ||||| | | || ||||||||||||||||||||||||||||||    
T  11056497 aaaggttagtgtggcaaccccatgcgctttgagttttacatgc 11056455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 19 - 270
Target Start/End: Original strand, 4181503 - 4181753
Alignment:
Q  19 attctccctctttctcttactctaaatcatccatcaattctcgaatgcatgagtgaattgctggaaccataaatctgtaaaacactgttaggagatacgc 118  Q
    |||||||||| |||||||| |||||||||||||||||||||| ||||||||||||| ||||| |||||||||| | |||||| |||||||| ||||||||    
T  4181503 attctccctcattctcttaatctaaatcatccatcaattctctaatgcatgagtga-ttgctcgaaccataaacccgtaaaatactgttagtagatacgc 4181601  T
Q  119 ttggtgtggttgtgcaatacacgtcaaggagctcatagtatactgaaggggattcgctggtcattcctattgcatccaatatagagttattggtgggggc 218  Q
    ||| ||||||||||||||||| |||||||| ||||||||||  |||||||||||| ||||||||||| ||||||||||||||||||||||||||||||      
T  4181602 ttgatgtggttgtgcaatacatgtcaaggaactcatagtatcatgaaggggattctctggtcattccaattgcatccaatatagagttattggtggggaa 4181701  T
Q  219 gaatcgaacctaaaggatggcgttgcaaccccatgcgctttgagttttacat 270  Q
    |||||||||||||||| | | ||  ||||||||| |||||||| ||||||||    
T  4181702 gaatcgaacctaaaggttagtgtgacaaccccatacgctttgaattttacat 4181753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 62 - 265
Target Start/End: Original strand, 5436694 - 5436898
Alignment:
Q  62 aatgcatgagtgaattgctggaaccataaatctgtaaaacactgttaggagatacgcttggtgtggttgtgcaatacacgtcaaggagctcatagtatac 161  Q
    ||||||| ||||||||||| ||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |    
T  5436694 aatgcattagtgaattgcttgaaccataaatctgtaaaatattgttaggagatacgcttggtgtggttgtgcaatacacgtcaaggacctcatagtatcc 5436793  T
Q  162 tgaaggggattcgctggtcattcc-tattgcatccaatatagagttattggtgggggcgaatcgaacctaaaggatggcgttgcaaccccatgcgctttg 260  Q
    | ||||| |||||| ||||||||| |||||||||||||||| |||||||||||||||| ||||||||||||||| |||  | ||||||||||||||||||    
T  5436794 tcaagggaattcgccggtcattccttattgcatccaatatacagttattggtgggggcaaatcgaacctaaaggttggtatggcaaccccatgcgctttg 5436893  T
Q  261 agttt 265  Q
    |||||    
T  5436894 agttt 5436898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 19 - 222
Target Start/End: Original strand, 37459962 - 37460165
Alignment:
Q  19 attctccctctttctcttactctaaatcatccatcaattctcgaatgcatgagtgaattgctggaaccataaatctgtaaaacactgttaggagatacgc 118  Q
    |||||||| | |||||||||||||||||||||||||||||||  |||||| || ||||||||| ||||||| |||||||||| | ||||| |||||||||    
T  37459962 attctcccacattctcttactctaaatcatccatcaattctctgatgcattagcgaattgctgaaaccatatatctgtaaaatattgttaagagatacgc 37460061  T
Q  119 ttggtgtggttgtgcaatacacgtcaaggagctcatagtatactgaaggggattcgctggtcattcctattgcatccaatatagagttattggtgggggc 218  Q
    ||| |||||||||||||||||| ||||||| ||||||||||  ||||| ||||||   |||||||| |||||||||||||||| |||||||||||||||     
T  37460062 ttgatgtggttgtgcaatacacatcaaggaactcatagtatcatgaagtggattcatcggtcattcttattgcatccaatatacagttattggtgggggt 37460161  T
Q  219 gaat 222  Q
    ||||    
T  37460162 gaat 37460165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 162 - 272
Target Start/End: Complemental strand, 14615370 - 14615260
Alignment:
Q  162 tgaaggggattcgctggtcattcctattgcatccaatatagagttattggtgggggcgaatcgaacctaaaggatggcgttgcaaccccatgcgctttga 261  Q
    |||||||||||||| ||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| | | || | |||||||| ||||||||    
T  14615370 tgaaggggattcgccggtcattcctattgcatccaatatacatttattggtgggggcgaatcgaacctaaaggttagtgtggaaaccccatacgctttga 14615271  T
Q  262 gttttacatgc 272  Q
    |||||||||||    
T  14615270 gttttacatgc 14615260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 5440409 - 5440490
Alignment:
Q  19 attctccctctttctcttactctaaatcatccatcaattctcgaatgcatgagtgaattgctggaaccataaatctgtaaaa 100  Q
    |||||||||| ||| |||||||||||||||| |||||||||| || || ||||| |||||||||||||||| ||||||||||    
T  5440409 attctccctcattcccttactctaaatcatcgatcaattctctaaagcttgagtaaattgctggaaccatacatctgtaaaa 5440490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 5449419 - 5449500
Alignment:
Q  19 attctccctctttctcttactctaaatcatccatcaattctcgaatgcatgagtgaattgctggaaccataaatctgtaaaa 100  Q
    |||||||||| ||| |||||||||||||||| |||||||||| || || ||||| |||||||||||||||| ||||||||||    
T  5449419 attctccctcattcccttactctaaatcatcgatcaattctctaaagcttgagtaaattgctggaaccatacatctgtaaaa 5449500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 112 - 175
Target Start/End: Complemental strand, 12239666 - 12239603
Alignment:
Q  112 gatacgcttggtgtggttgtgcaatacacgtcaaggagctcatagtatactgaaggggattcgc 175  Q
    |||||||||||||||  |||||||  |||||||||||  |||| |||| |||||||||||||||    
T  12239666 gatacgcttggtgtgaatgtgcaagtcacgtcaaggatttcatcgtatcctgaaggggattcgc 12239603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 191; Significance: 1e-104; HSPs: 17)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 19 - 272
Target Start/End: Original strand, 32429404 - 32429658
Alignment:
Q  19 attctccctctttctcttactctaaatcatccatcaattctcgaatgcatgagtgaattgctggaaccataaatctgtaaaacactgttaggagatacgc 118  Q
    |||||||||| ||||||||||||||||||||||||||||||  ||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||    
T  32429404 attctccctcattctcttactctaaatcatccatcaattctttaatgcatgagtgaattgttggaaccataaatctgtaaaatactgttaggagatacgc 32429503  T
Q  119 ttggtgtggttgtgcaatacacgtcaaggagctcatagtatactgaaggggattcgctggtcattcc-tattgcatccaatatagagttattggtggggg 217  Q
    || ||||||||||||||||||||||||||| |||||||||| ||||||||||||||| ||||||||| |||||||||||||||| |||||||||||||||    
T  32429504 tttgtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattccttattgcatccaatatacagttattggtggggg 32429603  T
Q  218 cgaatcgaacctaaaggatggcgttgcaaccccatgcgctttgagttttacatgc 272  Q
    ||||||||||||||||| | | || ||||||||||||||||||||||||||||||    
T  32429604 cgaatcgaacctaaaggttagtgtggcaaccccatgcgctttgagttttacatgc 32429658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 30 - 272
Target Start/End: Complemental strand, 35096100 - 35095858
Alignment:
Q  30 ttctcttactctaaatcatccatcaattctcgaatgcatgagtgaattgctggaaccataaatctgtaaaacactgttaggagatacgcttggtgtggtt 129  Q
    |||| ||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  35096100 ttctattattctaaatcatccatcaattctctaatgcatgagtgaattgctggaaccataaatctgtaaaatactgttaggagatacgcttggtgtggtt 35096001  T
Q  130 gtgcaatacacgtcaaggagctcatagtatactgaaggggattcgctggtcattcctattgcatccaatatagagttattggtgggggcgaatcgaacct 229  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||||||||||||| | |||||||||||||||||||||||||    
T  35096000 gtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtgggggcgaatcgaacct 35095901  T
Q  230 aaaggatggcgttgcaaccccatgcgctttgagttttacatgc 272  Q
    ||||| | | || |||||||||| |||||||||||||||||||    
T  35095900 aaaggttagtgtggcaaccccatacgctttgagttttacatgc 35095858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 30 - 272
Target Start/End: Complemental strand, 35090987 - 35090745
Alignment:
Q  30 ttctcttactctaaatcatccatcaattctcgaatgcatgagtgaattgctggaaccataaatctgtaaaacactgttaggagatacgcttggtgtggtt 129  Q
    |||| ||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  35090987 ttctattattctaaatcatccatcaattctctaatgcatgagtgaattgctggaaccataaatctgtaaaatactgttaggagatacgcttggtgtggtt 35090888  T
Q  130 gtgcaatacacgtcaaggagctcatagtatactgaaggggattcgctggtcattcctattgcatccaatatagagttattggtgggggcgaatcgaacct 229  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||||||||||||| | |||||||||||||||||||||||||    
T  35090887 gtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtgggggcgaatcgaacct 35090788  T
Q  230 aaaggatggcgttgcaaccccatgcgctttgagttttacatgc 272  Q
    ||||| | | || |||||||||| | |||| | ||||||||||    
T  35090787 aaaggttagtgtggcaaccccatacactttaaattttacatgc 35090745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 19 - 272
Target Start/End: Complemental strand, 18716572 - 18716316
Alignment:
Q  19 attctccctctttctcttactctaaatcatccatcaattctcgaatgcatgagtgaattgctggaaccataaatctgtaaaacactgttaggagatacgc 118  Q
    |||||||| | ||||||||||||||||||||||||||||||| ||| || |||||||||||||||||||||||||||||||| ||| |||| ||||||||    
T  18716572 attctcccccattctcttactctaaatcatccatcaattctctaatacaagagtgaattgctggaaccataaatctgtaaaatactattagaagatacgc 18716473  T
Q  119 ttgg--tgtggttgtgcaatacacgtcaaggagctcatagtatactgaaggggattcgctggtcattc-ctattgcatccaatatagagttattggtggg 215  Q
    ||||  ||||||||||||||||||||||| || ||| |||||| ||||||||||||||| ||||||||  |||||||||||||||| |||||||||||||    
T  18716472 ttggtgtgtggttgtgcaatacacgtcaaagaactcttagtatcctgaaggggattcgccggtcattctttattgcatccaatatatagttattggtggg 18716373  T
Q  216 ggcgaatcgaacctaaaggatggcgttgcaaccccatgcgctttgagttttacatgc 272  Q
    ||||||||||||||||||| | | || ||||||||||||||||||||||||||||||    
T  18716372 ggcgaatcgaacctaaaggttagtgtggcaaccccatgcgctttgagttttacatgc 18716316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 19 - 272
Target Start/End: Original strand, 34279612 - 34279865
Alignment:
Q  19 attctccctctttctcttactctaaatcatccatcaattctcgaatgcatgagtgaattgctggaaccataaatctgtaaaacactgttaggagatacgc 118  Q
    ||||| |||| |||||||||||||||||| |||||||||||| |||||||||||||||| ||| |||||||||||||||||| |||||||||||||||||    
T  34279612 attcttcctcgttctcttactctaaatcaaccatcaattctctaatgcatgagtgaattcctgaaaccataaatctgtaaaatactgttaggagatacgc 34279711  T
Q  119 ttggtgtggttgtgcaatacacgtcaaggagctcatagtatactgaaggggattcgctggtcattcctattgcatccaatatagagttattggtgggggc 218  Q
    |||||||||||||||||||||||||||| | ||||||||||  ||||||||| |||  ||||||||||||||||| ||||||| ||||||||||||||||    
T  34279712 ttggtgtggttgtgcaatacacgtcaagaaactcatagtattttgaaggggaatcgtcggtcattcctattgcattcaatatacagttattggtgggggc 34279811  T
Q  219 gaatcgaacctaaaggatggcgttgcaaccccatgcgctttgagttttacatgc 272  Q
    |||||||| ||||||| | | ||  ||| |||||||||||||||||||||||||    
T  34279812 gaatcgaagctaaaggttagtgtgacaatcccatgcgctttgagttttacatgc 34279865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 156; E-Value: 6e-83
Query Start/End: Original strand, 30 - 272
Target Start/End: Original strand, 30019982 - 30020224
Alignment:
Q  30 ttctcttactctaaatcatccatcaattctcgaatgcatgagtgaattgctggaaccataaatctgtaaaacactgttaggagatacgcttggtgtggtt 129  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| ||| ||| |||||||||||||||| |||||||||||    
T  30019982 ttctcttactctaaatcatccatcaattctctaatgcatgagtgaattgttggaaccataaatatgtgaaatactgttaggagatacgtttggtgtggtt 30020081  T
Q  130 gtgcaatacacgtcaaggagctcatagtatactgaaggggattcgctggtcattcc-tattgcatccaatatagagttattggtgggggcgaatcgaacc 228  Q
     |||||||||||||||||| |||||||||| ||||||||||||||| ||||||||| |||||||||||||||| ||||||||||||||||||||||||||    
T  30020082 atgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattccttattgcatccaatatacagttattggtgggggcgaatcgaacc 30020181  T
Q  229 taaaggatggcgttgcaaccccatgcgctttgagttttacatgc 272  Q
     ||||| |    | | ||||||||||||||||||||||||||||    
T  30020182 -aaaggttaatatggtaaccccatgcgctttgagttttacatgc 30020224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 19 - 272
Target Start/End: Complemental strand, 18737245 - 18736989
Alignment:
Q  19 attctccctctttctcttactctaaatcatccatcaattctcgaatgcatgagtgaattgctggaaccataaatctgtaaaacactgttaggagatacgc 118  Q
    |||||||||| ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| ||| |||| |||| |||    
T  18737245 attctccctcattctcttactctaaatcatccatcaattctctaattcatgagtgaattgctggaaccataaatctgtaaaatacttttagaagattcgc 18737146  T
Q  119 ttgg--tgtggttgtgcaatacacgtcaaggagctcatagtatactgaaggggattcgctggtcattc-ctattgcatccaatatagagttattggtggg 215  Q
    ||||  |||||||||||||||||||||||||| |||||||||| ||||||||||||||| ||||||||  ||||||||| |||||| |||||||||||||    
T  18737145 ttggtgtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattctttattgcatctaatatatagttattggtggg 18737046  T
Q  216 ggcgaatcgaacctaaaggatggcgttgcaaccccatgcgctttgagttttacatgc 272  Q
    ||||||| ||||||||||| | |  | || ||| |||||||||||||||||||||||    
T  18737045 ggcgaattgaacctaaaggttagtttggctacctcatgcgctttgagttttacatgc 18736989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 21 - 272
Target Start/End: Original strand, 3424823 - 3425074
Alignment:
Q  21 tctccctctttctcttactctaaatcatccatcaattctcgaatgcatgagtgaattgctggaaccataaatctgtaaaacactgttaggagatacgctt 120  Q
    |||||||| ||||||||||||||||||||||| ||||||| ||||||||||||| || |||||| ||||||||||||||| |||||||||||||||| ||    
T  3424823 tctccctcattctcttactctaaatcatccattaattctctaatgcatgagtgagttactggaaacataaatctgtaaaatactgttaggagatacggtt 3424922  T
Q  121 ggtgtggttgtgcaatacacgtcaaggagctcatagtatactgaaggggattcgctggtcattcctattgcatccaatatagagttattggtgggggcga 220  Q
    |||||||||||||||||||| |||| || |||||||||| || |||| ||||||||| ||||||||||||||||||||||  ||||||||||||||| ||    
T  3424923 ggtgtggttgtgcaatacacatcaatgaactcatagtatcctaaaggagattcgctgttcattcctattgcatccaatattcagttattggtgggggaga 3425022  T
Q  221 atcgaacctaaaggatggcgttgcaaccccatgcgctttgagttttacatgc 272  Q
    |||||||||||||| | | ||  ||| ||||||||||||||||||| |||||    
T  3425023 atcgaacctaaaggttagtgtgacaatcccatgcgctttgagttttgcatgc 3425074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 19 - 272
Target Start/End: Complemental strand, 18670923 - 18670671
Alignment:
Q  19 attctccctctttctcttactctaaatcatccatcaattctcgaatgcatgagtgaattgctggaaccataaatctgtaaaacactgttaggagatacgc 118  Q
    |||||||||| ||||||||||||||||||||||||||||||| ||||||||||||| ||| ||||||||||||||||||||| | ||||||||||||| |    
T  18670923 attctccctcattctcttactctaaatcatccatcaattctctaatgcatgagtgacttgttggaaccataaatctgtaaaatattgttaggagatacac 18670824  T
Q  119 ttggtgtggttgtgcaatacacgtcaaggagctcatagtatactgaaggggattcgctggtcattcc-tattgcatccaatatagagttattggtgggg- 216  Q
    |||||||||||||||||||||  | ||||| |||||||||| ||||| ||||||||| ||||||||| |||||||| ||||||| ||||||||||||||     
T  18670823 ttggtgtggttgtgcaataca--tgaaggaactcatagtatcctgaa-gggattcgccggtcattccttattgcattcaatatatagttattggtggggt 18670727  T
Q  217 gcgaatcgaacctaaaggatggcgttgcaaccccatgcgctttgagttttacatgc 272  Q
    | |||||||||||||||| | | || ||||| ||||||||||||| ||||||||||    
T  18670726 gtgaatcgaacctaaaggttagtgtggcaactccatgcgctttgaattttacatgc 18670671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 19 - 267
Target Start/End: Original strand, 54859278 - 54859525
Alignment:
Q  19 attctccctctttctcttactctaaatcatccatcaattctcgaatgcatgagtgaattgctggaaccataaatctgtaaaacactgttaggagatacgc 118  Q
    |||||||||| ||||||| ||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| |||||| ||||||||||||||||     
T  54859278 attctccctcattctcttgctctaaatcatccatcaattctctaatgcacgagtgaattgctggaaccataaatccgtaaaatactgttaggagatacgt 54859377  T
Q  119 ttggtgtggttgtgcaatacacgtcaaggagctcatagtatactgaaggggattcgctggtcattcctattgcatccaatatagagttattggtgggggc 218  Q
    ||||||| |||||| ||||||| ||||||| |||||| |||  |||||||| ||||||||| ||||||||||||||||||||| | |||||||| ||| |    
T  54859378 ttggtgtagttgtgtaatacacatcaaggaactcatattatcatgaaggggtttcgctggtaattcctattgcatccaatatacaattattggt-gggac 54859476  T
Q  219 gaatcgaacctaaaggatggcgttgcaaccccatgcgctttgagtttta 267  Q
    |||| |||| |||||| | | || |||||||||||||||||||||||||    
T  54859477 gaattgaacataaaggttagtgtggcaaccccatgcgctttgagtttta 54859525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 19 - 272
Target Start/End: Complemental strand, 47071491 - 47071239
Alignment:
Q  19 attctccctctttctcttactctaaatcatccatcaattctcgaatgcatgagtgaattgctggaaccataaatctgtaaaacactgttaggagatacgc 118  Q
    |||||||||| |||||||||||||||| ||| |||||||||| |||| |||||||||||| | ||||||||||| ||||||| |||| || |||||| |     
T  47071491 attctccctcattctcttactctaaattatctatcaattctctaatgaatgagtgaattgtttgaaccataaatttgtaaaatactgatatgagatatga 47071392  T
Q  119 ttggtgtggttgtgcaatacacgtcaaggagctcatagtatactgaaggggattcgctggtcattcctattgcatccaatatagagttattggtgggggc 218  Q
    |||||||||||||||||||||| ||||||| ||||||||||  ||||||||||||||||||||||| ||||||||| |||||| | |||||| | ||||     
T  47071391 ttggtgtggttgtgcaatacacatcaaggaactcatagtatcatgaaggggattcgctggtcattcatattgcatcaaatatacaattattgat-ggggt 47071293  T
Q  219 gaatcgaacctaaaggatggcgttgcaaccccatgcgctttgagttttacatgc 272  Q
    |||||||||||||||| | | || ||||||||||||||||||||||||||||||    
T  47071292 gaatcgaacctaaaggttagtgtggcaaccccatgcgctttgagttttacatgc 47071239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 79 - 272
Target Start/End: Original strand, 3415333 - 3415526
Alignment:
Q  79 ctggaaccataaatctgtaaaacactgttaggagatacgcttggtgtggttgtgcaatacacgtcaaggagctcatagtatactgaaggggattcgctgg 178  Q
    |||||||||||||||||||||| ||| |||||||||||| |||||||||||||||||||||| |||| || |||||||||| ||||||| |||||| |||    
T  3415333 ctggaaccataaatctgtaaaatactattaggagatacggttggtgtggttgtgcaatacacatcaatgaactcatagtatcctgaaggagattcgttgg 3415432  T
Q  179 tcattcctattgcatccaatatagagttattggtgggggcgaatcgaacctaaaggatggcgttgcaaccccatgcgctttgagttttacatgc 272  Q
    ||||||||||| ||||||||||| |||||||||||||||||||| ||||||||||| | | || |||| |||||||||||||||||||||||||    
T  3415433 tcattcctattacatccaatatacagttattggtgggggcgaattgaacctaaaggttagtgtggcaatcccatgcgctttgagttttacatgc 3415526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 19 - 201
Target Start/End: Original strand, 34128358 - 34128540
Alignment:
Q  19 attctccctctttctcttactctaaatcatccatcaattctcgaatgcatgagtgaattgctggaaccataaatctgtaaaacactgttaggagatacgc 118  Q
    |||||||||| |||||||||||||||||||||||||||| || ||||||||||||||||| || |||||||||||||||||| |  ||||||||||| |     
T  34128358 attctccctcattctcttactctaaatcatccatcaattttctaatgcatgagtgaattgttgaaaccataaatctgtaaaatatggttaggagatatgt 34128457  T
Q  119 ttggtgtggttgtgcaatacacgtcaaggagctcatagtatactgaaggggattcgctggtcattcctattgcatccaatata 201  Q
    |||||||||||||||||||||| ||| | | |||||||||| ||||||| |||| ||||||||||||| ||||||||||||||    
T  34128458 ttggtgtggttgtgcaatacacctcatgaaactcatagtatcctgaaggagatttgctggtcattccttttgcatccaatata 34128540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 113 - 272
Target Start/End: Original strand, 14646483 - 14646642
Alignment:
Q  113 atacgcttggtgtggttgtgcaatacacgtcaaggagctcatagtatactgaaggggattcgctggtcattcctattgcatccaatatagagttattggt 212  Q
    ||||||||||||||||| |||||||||| | ||||| |||||||||| || |||||||||||| ||||||||||||||||||||||||| ||||||| ||    
T  14646483 atacgcttggtgtggttctgcaatacacattaaggaactcatagtatcctaaaggggattcgcgggtcattcctattgcatccaatatacagttattagt 14646582  T
Q  213 gggggcgaatcgaacctaaaggatggcgttgcaaccccatgcgctttgagttttacatgc 272  Q
    |||||| |||||||||||||||   | || | ||||||||| ||||| ||||||||||||    
T  14646583 gggggcaaatcgaacctaaaggtcagtgtggaaaccccatgagctttaagttttacatgc 14646642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 30 - 116
Target Start/End: Original strand, 14643862 - 14643948
Alignment:
Q  30 ttctcttactctaaatcatccatcaattctcgaatgcatgagtgaattgctggaaccataaatctgtaaaacactgttaggagatac 116  Q
    ||||||||||||||||||||||||||||||| |||| ||  |||||||||||||||||||||||| ||||| ||||||||| |||||    
T  14643862 ttctcttactctaaatcatccatcaattctctaatgtataggtgaattgctggaaccataaatctctaaaatactgttaggggatac 14643948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 74
Target Start/End: Original strand, 34602066 - 34602121
Alignment:
Q  19 attctccctctttctcttactctaaatcatccatcaattctcgaatgcatgagtga 74  Q
    |||||||||| |||| ||||||||||||||||||||||| ||  ||||||||||||    
T  34602066 attctccctcattcttttactctaaatcatccatcaattttcttatgcatgagtga 34602121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 21 - 77
Target Start/End: Original strand, 3409721 - 3409781
Alignment:
Q  21 tctccctctttctcttactctaaatcatccatc----aattctcgaatgcatgagtgaatt 77  Q
    |||||||| |||||||||||||||||||||||     ||||||| ||||||||||||||||    
T  3409721 tctccctcattctcttactctaaatcatccatatattaattctctaatgcatgagtgaatt 3409781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 191; Significance: 1e-104; HSPs: 20)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 14 - 272
Target Start/End: Complemental strand, 19310912 - 19310655
Alignment:
Q  14 atattattctccctctttctcttactctaaatcatccatcaattctcgaatgcatgagtgaattgctggaaccataaatctgtaaaacactgttaggaga 113  Q
    |||| |||||||||| |||||||||| |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| ||||||||    
T  19310912 atataattctccctcattctcttactataaatcatccatcaattctctaatgcatgaatgaattgctggaaccataaatctgtaaaacactattaggaga 19310813  T
Q  114 tacgcttggtgtggttgtgcaatacacgtcaaggagctcatagtatactgaaggggattcgctggtcattcctattgcatccaatatagagttattggtg 213  Q
    || |||||||| ||||||||||||||||||||||| |||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19310812 tatgcttggtgcggttgtgcaatacacgtcaaggaactcataatatact-aaggggattcgctggtcattcctattgcatccaatatagagttattggtg 19310714  T
Q  214 ggggcgaatcgaacctaaaggatggcgttgcaaccccatgcgctttgagttttacatgc 272  Q
    |||| |||||||||||||||| | | |||||||||||||||||||||||||| ||||||    
T  19310713 ggggtgaatcgaacctaaaggttagtgttgcaaccccatgcgctttgagtttcacatgc 19310655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 30 - 272
Target Start/End: Complemental strand, 28598381 - 28598139
Alignment:
Q  30 ttctcttactctaaatcatccatcaattctcgaatgcatgagtgaattgctggaaccataaatctgtaaaacactgttaggagatacgcttggtgtggtt 129  Q
    |||| ||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  28598381 ttctattattctaaatcatccatcaattctctaatgcatgagtgaattgctggaaccataaatctgtaaaatactgttaggagatacgcttggtgtggtt 28598282  T
Q  130 gtgcaatacacgtcaaggagctcatagtatactgaaggggattcgctggtcattcctattgcatccaatatagagttattggtgggggcgaatcgaacct 229  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||||||||||||| | |||||||||||||||||||||||||    
T  28598281 gtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtgggggcgaatcgaacct 28598182  T
Q  230 aaaggatggcgttgcaaccccatgcgctttgagttttacatgc 272  Q
    ||||| | | || |||||||||| |||||||||||||||||||    
T  28598181 aaaggttagtgtggcaaccccatacgctttgagttttacatgc 28598139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 183; E-Value: 5e-99
Query Start/End: Original strand, 30 - 272
Target Start/End: Complemental strand, 3465545 - 3465303
Alignment:
Q  30 ttctcttactctaaatcatccatcaattctcgaatgcatgagtgaattgctggaaccataaatctgtaaaacactgttaggagatacgcttggtgtggtt 129  Q
    |||| ||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  3465545 ttctattattctaaatcatccatcaattctctaatgcatgagtgaattgctggaaccataaatctgtaaaatactgttaggagatacgcttggtgtggtt 3465446  T
Q  130 gtgcaatacacgtcaaggagctcatagtatactgaaggggattcgctggtcattcctattgcatccaatatagagttattggtgggggcgaatcgaacct 229  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||||||||||||| | |||||||||||| ||||||||||||    
T  3465445 gtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtggggacgaatcgaacct 3465346  T
Q  230 aaaggatggcgttgcaaccccatgcgctttgagttttacatgc 272  Q
    ||||| | | || |||||||||| |||||||||||||||||||    
T  3465345 aaaggttagtgtggcaaccccatacgctttgagttttacatgc 3465303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 183; E-Value: 5e-99
Query Start/End: Original strand, 30 - 272
Target Start/End: Complemental strand, 28574369 - 28574127
Alignment:
Q  30 ttctcttactctaaatcatccatcaattctcgaatgcatgagtgaattgctggaaccataaatctgtaaaacactgttaggagatacgcttggtgtggtt 129  Q
    |||| ||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  28574369 ttctattattctaaatcatccatcaattctctaatgcatgagtgaattgctggaaccataaatctgtaaaatactgttaggagatacgcttggtgtggtt 28574270  T
Q  130 gtgcaatacacgtcaaggagctcatagtatactgaaggggattcgctggtcattcctattgcatccaatatagagttattggtgggggcgaatcgaacct 229  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||||||||||||| | |||||||||||||||||||||||||    
T  28574269 gtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtgggggcgaatcgaacct 28574170  T
Q  230 aaaggatggcgttgcaaccccatgcgctttgagttttacatgc 272  Q
    ||||| | | || |||||||||| |||||| ||||||||||||    
T  28574169 aaaggttagtgtggcaaccccatacgctttaagttttacatgc 28574127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 19 - 272
Target Start/End: Complemental strand, 13654420 - 13654165
Alignment:
Q  19 attctccctctttctcttactct--aaatcatccatcaattctcgaatgcatgagtgaattgctggaaccataaatctgtaaaacactgttaggagatac 116  Q
    |||||||||| ||||||| ||||  ||||||||||| ||||||| |||||||||||||||||||| |||||||||||||||||| |||||||||||||||    
T  13654420 attctccctcattctcttgctctctaaatcatccattaattctctaatgcatgagtgaattgctgaaaccataaatctgtaaaatactgttaggagatac 13654321  T
Q  117 gcttggtgtggttgtgcaatacacgtcaaggagctcatagtatactgaaggggattcgctggtcattcctattgcatccaatatagagttattggtgggg 216  Q
    |||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| ||| | ||||||||||||||||||| ||||||||||||||    
T  13654320 gcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtaactcctattgcatccaatatacagttattggtgggg 13654221  T
Q  217 gcgaatcgaacctaaaggatggcgttgcaaccccatgcgctttgagttttacatgc 272  Q
    |||||||||||||||||| | | || ||||||||||||||||||| ||||||||||    
T  13654220 gcgaatcgaacctaaaggttagtgtggcaaccccatgcgctttgaattttacatgc 13654165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 19 - 272
Target Start/End: Complemental strand, 43358836 - 43358581
Alignment:
Q  19 attctccctctttctcttactctaaatcatccatcaattctcgaatgcatgagtgaattgctggaaccataaatctgtaaaacactgttaggagatacgc 118  Q
    |||||||||| |||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| | |||||||||||| |     
T  43358836 attctccctcattctcttactctaaattatccatcaattctctaatgcatgagtgaattgctggaaccataaatctgtaaaaaattgttaggagatatgt 43358737  T
Q  119 ttggtgtggttgtgcaatacacgtcaaggagctc--atagtatactgaaggggattcgctggtcattcctattgcatccaatatagagttattggtgggg 216  Q
    |||||||||||||||||||||||||||||| |||  ||||||| ||||||||||||||| ||||| ||||||||||||||||||| ||||||||||||||    
T  43358736 ttggtgtggttgtgcaatacacgtcaaggaactcatatagtattctgaaggggattcgccggtcactcctattgcatccaatatacagttattggtgggg 43358637  T
Q  217 gcgaatcgaacctaaaggatggcgttgcaaccccatgcgctttgagttttacatgc 272  Q
    || ||||||||||||| | | | || |||||| |||||||||||||||||||||||    
T  43358636 gcaaatcgaacctaaatgttagtgtggcaacctcatgcgctttgagttttacatgc 43358581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 25 - 272
Target Start/End: Complemental strand, 1187905 - 1187658
Alignment:
Q  25 cctctttctcttactctaaatcatccatcaattctcgaatgcatgagtgaattgctggaaccataaatctgtaaaacactgttaggagatacgcttggtg 124  Q
    |||| ||||||||||||||||||||||||||||||  ||||||||||||||||| | ||||||||||||||||||| | |||||||||||||||||||||    
T  1187905 cctcattctcttactctaaatcatccatcaattctttaatgcatgagtgaattggtagaaccataaatctgtaaaatattgttaggagatacgcttggtg 1187806  T
Q  125 tggttgtgcaatacacgtcaaggagctcatagtatactgaaggggattcgctggtcattcctattgcatccaatatagagttattggtgggggcgaatcg 224  Q
    |||||||||||||||| ||||||| ||||||||||  |||||| |||||||||||| |||||||||||||||||||| |||||||||||||||||||||     
T  1187805 tggttgtgcaatacacatcaaggaactcatagtatcatgaaggagattcgctggtctttcctattgcatccaatatacagttattggtgggggcgaatca 1187706  T
Q  225 aacctaaaggatggcgttgcaaccccatgcgctttgagttttacatgc 272  Q
    |||||||||| | | || |||||||||||| |||||||||||||||||    
T  1187705 aacctaaaggttagtgtggcaaccccatgcactttgagttttacatgc 1187658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 33 - 272
Target Start/End: Complemental strand, 16051275 - 16051036
Alignment:
Q  33 tcttactctaaatcatccatcaattctcgaatgcatgagtgaattgctggaaccataaatctgtaaaacactgttaggagatacgcttggtgtggttgtg 132  Q
    ||||||| |||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||| ||||    
T  16051275 tcttactttaaatcatccatcaattctctaatgcatgagtgaattgctgaaaccataaatctgtaaaatactgttaggaaatacgcttggtgtggctgtg 16051176  T
Q  133 caatacacgtcaaggagctcatagtatactgaaggggattcgctggtcattcctattgcatccaatatagagttattggtgggggcgaatcgaacctaaa 232  Q
    |||||||| ||||||| ||||||||||  ||||||| ||||||| ||||||| | ||||||| |||||| ||||||||||||||||||||||||||||||    
T  16051175 caatacacatcaaggaactcatagtatcttgaagggtattcgctagtcattcattttgcatcaaatatacagttattggtgggggcgaatcgaacctaaa 16051076  T
Q  233 ggatggcgttgcaaccccatgcgctttgagttttacatgc 272  Q
    || | | || |||||||| |||||| ||||||||||||||    
T  16051075 ggttagtgtggcaaccccgtgcgctctgagttttacatgc 16051036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 19 - 271
Target Start/End: Original strand, 10186700 - 10186949
Alignment:
Q  19 attctccctctttctcttactctaaatcatccatcaattctcgaatgcatgagtgaattgctggaaccataaatctgtaaaacac----tgttaggagat 114  Q
    ||||||| || ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |     |||||||||||    
T  10186700 attctccatcattctcttactctaaatcatccatcaattctctaatgcatgagtgaattgctggaaccataaatctgtaaaataaatattgttaggagat 10186799  T
Q  115 acgcttggtgtggttgtgcaatacacgtcaaggagctcatagtatactgaaggggattcgctggtcattcctattgcatccaatatagagttattggtgg 214  Q
    ||| |||||||||||||||||||||||||||||| ||||||||||        |||||| ||||||||| ||||||||||||||||| | ||||||||||    
T  10186800 acgtttggtgtggttgtgcaatacacgtcaaggaactcatagtat-------cggattcactggtcatttctattgcatccaatatacaattattggtgg 10186892  T
Q  215 gggcgaatcgaacctaaaggatggcgttgcaaccccatgcgctttgagttttacatg 271  Q
    |||||||||||||||||||| | | || |||||||||||||||||||||||||||||    
T  10186893 gggcgaatcgaacctaaaggttagtgtggcaaccccatgcgctttgagttttacatg 10186949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 19 - 272
Target Start/End: Original strand, 44524143 - 44524392
Alignment:
Q  19 attctccctctttctcttactctaaatcatccatcaattctcgaatgcatgagtgaattgctggaaccataaatctgtaaaacactgttaggagatacgc 118  Q
    ||||||| || |||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  44524143 attctccatcattctcttactttaaatcatccatcaattctctaatgcatgagtgaattgctggaaccataaatctgtaaaatactgttaggagatacgc 44524242  T
Q  119 ttggtgtggttgtgcaatacacgtcaaggagctcatagtatactgaaggggattcgctggtcattcctattgcatccaatatagagttattggtgggggc 218  Q
    |||   |||||||||||||||| ||||||| |||||||||| | ||||||||||||  | ||||||||||||||||||||||| |||||||| |||||||    
T  44524243 ttg---tggttgtgcaatacacatcaaggaactcatagtattccgaaggggattcgtcgatcattcctattgcatccaatatacagttattgatgggggc 44524339  T
Q  219 gaatcgaacctaaaggatggcgttgcaaccccatgcgctttgagttttacatgc 272  Q
    ||||||||| |||| | | | ||  ||||||||||||||||||||||| |||||    
T  44524340 gaatcgaac-taaatgttagtgtgacaaccccatgcgctttgagttttgcatgc 44524392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 62 - 265
Target Start/End: Original strand, 48366215 - 48366419
Alignment:
Q  62 aatgcatgagtgaattgctggaaccataaatctgtaaaacactgttaggagatacgcttggtgtggttgtgcaatacacgtcaaggagctcatagtatac 161  Q
    ||||||| ||||||||||||||||||||||||||||||| | |||| |||||||||||||||||||||||||||||||||||||||| |||||||||| |    
T  48366215 aatgcattagtgaattgctggaaccataaatctgtaaaatattgtttggagatacgcttggtgtggttgtgcaatacacgtcaaggacctcatagtatcc 48366314  T
Q  162 tgaaggggattcgctggtcattcc-tattgcatccaatatagagttattggtgggggcgaatcgaacctaaaggatggcgttgcaaccccatgcgctttg 260  Q
    | |||||||||||| ||||||||| |||||||||||||||| | |||||||||||||| ||||||||||||||| |||  | ||||||||||||||||||    
T  48366315 tcaaggggattcgccggtcattccttattgcatccaatatacaattattggtgggggcaaatcgaacctaaaggttggtatggcaaccccatgcgctttg 48366414  T
Q  261 agttt 265  Q
    |||||    
T  48366415 agttt 48366419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 62 - 265
Target Start/End: Complemental strand, 29681630 - 29681427
Alignment:
Q  62 aatgcatgagtgaattgctggaaccataaatctgtaaaacactgttaggagatacgcttggtgtggttgtgcaatacacgtcaaggagctcatagtatac 161  Q
    ||||||| ||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |    
T  29681630 aatgcattagtgaattgctggaaccataaatctgtaaaatattgttaggagatacgcttggtgtggttgtgcaatacacgtcaaggacctcatagtatcc 29681531  T
Q  162 tgaaggggattcgctggtcattcc-tattgcatccaatatagagttattggtgggggcgaatcgaacctaaaggatggcgttgcaaccccatgcgctttg 260  Q
    | || |||||| || ||||||||| |||||||||||||||| |||||||||| ||||| ||||||||||||||| |||  | ||||||||||||||||||    
T  29681530 tcaaagggatttgccggtcattccttattgcatccaatatacagttattggt-ggggcaaatcgaacctaaaggttggtatggcaaccccatgcgctttg 29681432  T
Q  261 agttt 265  Q
    |||||    
T  29681431 agttt 29681427  T

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Target: chr1; HSP #13
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 30 - 159
Target Start/End: Complemental strand, 3468139 - 3468010
Alignment:
Q  30 ttctcttactctaaatcatccatcaattctcgaatgcatgagtgaattgctggaaccataaatctgtaaaacactgttaggagatacgcttggtgtggtt 129  Q
    |||| ||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  3468139 ttctattattctaaatcatccatcaattctctaatgcatgagtgaattgctggaaccataaatctgtaaaatactgttaggagatacgcttggtgtggtt 3468040  T
Q  130 gtgcaatacacgtcaaggagctcatagtat 159  Q
    ||||||||||||||||||| ||||||||||    
T  3468039 gtgcaatacacgtcaaggaactcatagtat 3468010  T

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Target: chr1; HSP #14
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 19 - 134
Target Start/End: Complemental strand, 35626255 - 35626140
Alignment:
Q  19 attctccctctttctcttactctaaatcatccatcaattctcgaatgcatgagtgaattgctggaaccataaatctgtaaaacactgttaggagatacgc 118  Q
    |||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||| ||| ||||||||||||     
T  35626255 attctccctcattctcttactctaaatcatccatcaattctctaatgcatgagtgaattgttggaaccataaatctataaaatactattaggagatacgt 35626156  T
Q  119 ttggtgtggttgtgca 134  Q
    | | ||||||||||||    
T  35626155 tcgatgtggttgtgca 35626140  T

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Target: chr1; HSP #15
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 142 - 272
Target Start/End: Complemental strand, 35624977 - 35624847
Alignment:
Q  142 tcaaggagctcatagtatactgaaggggattcgctggtcattcctattgcatccaatatagagttattggtgggggcgaatcgaacctaaaggatggcgt 241  Q
    ||||||| |||||||||| ||||||||||||||| ||||| ||||||||||||||||||| |||| ||||||||||||||||||||||||||| | |  |    
T  35624977 tcaaggaactcatagtatcctgaaggggattcgccggtcactcctattgcatccaatatacagttgttggtgggggcgaatcgaacctaaaggttagtat 35624878  T
Q  242 tgcaaccccatgcgctttgagttttacatgc 272  Q
      |||||||| ||||||||||||||||||||    
T  35624877 gacaaccccacgcgctttgagttttacatgc 35624847  T

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Target: chr1; HSP #16
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 17414657 - 17414738
Alignment:
Q  19 attctccctctttctcttactctaaatcatccatcaattctcgaatgcatgagtgaattgctggaaccataaatctgtaaaa 100  Q
    |||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  17414657 attctccctcattctcttactctaaatcatccatcaattctctaatgcatgagtgaattgctggaaccataaatctggaaaa 17414738  T

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Target: chr1; HSP #17
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 104 - 232
Target Start/End: Original strand, 17415391 - 17415519
Alignment:
Q  104 tgttaggagatacgcttggtgtggttgtgcaatacacgtcaaggagctcatagtatactgaaggggattcgctggtcattcctattgcatccaatataga 203  Q
    ||||| |||||| | |||||||| || |||||||||| ||||| | || ||||||| |||||| ||||| | |||||||||||||| ||||||||||| |    
T  17415391 tgttaagagatatgattggtgtgattatgcaatacacatcaagaaactaatagtatcctgaagaggatttgatggtcattcctatttcatccaatataca 17415490  T
Q  204 gttattggtgggggcgaatcgaacctaaa 232  Q
     |||||||||||||| |||||||||||||    
T  17415491 attattggtgggggcaaatcgaacctaaa 17415519  T

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Target: chr1; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 21431793 - 21431865
Alignment:
Q  19 attctccctctttctcttactctaaatcatccatcaattctcgaatgcatgagtgaattgctggaaccataaa 91  Q
    |||||||||| |||||||| |||||||||||||||||||||| ||||||| ||||||||| ||||||||||||    
T  21431793 attctccctcattctcttaatctaaatcatccatcaattctctaatgcatcagtgaattgatggaaccataaa 21431865  T

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Target: chr1; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 151 - 272
Target Start/End: Original strand, 21431918 - 21432040
Alignment:
Q  151 tcatagtatactgaaggggattcgctggtcattcct-attgcatccaatatagagttattggtgggggcgaatcgaacctaaaggatggcgttgcaaccc 249  Q
    ||||||||| | ||||||||||| | |||||||||| ||||||  ||||||| ||||||||||||||| |||||||| ||||| | | | || ||||||     
T  21431918 tcatagtatccagaaggggattcaccggtcattccttattgcaaacaatatatagttattggtgggggtgaatcgaatctaaaagttagtgtggcaacct 21432017  T
Q  250 catgcgctttgagttttacatgc 272  Q
    |||||| ||||||||||||||||    
T  21432018 catgcgatttgagttttacatgc 21432040  T

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Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 200
Target Start/End: Original strand, 3696450 - 3696605
Alignment:
Q  41 taaatcatccatcaattctcgaatgcatgagtgaattgctggaaccataaatctgtaaaacactgttaggagatacgcttggtgtggttgtgcaatacac 140  Q
    ||||||||||||||||||||    | |||| ||||||| ||||||||| ||| ||||||| || |||| |||||||  ||| |||| |||||  | ||||    
T  3696450 taaatcatccatcaattctctgcagaatgaatgaattgatggaaccat-aatttgtaaaatacggttaagagatacttttgctgtgattgtg--aaacac 3696546  T
Q  141 gtcaaggagctcatagtatactgaaggggattcgctggtcattcctattgcatccaatat 200  Q
     |||||||  |||||||||  |||||| ||||   || ||||| ||||||||||||||||    
T  3696547 atcaaggaattcatagtatcttgaaggagatttattgatcatt-ctattgcatccaatat 3696605  T

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Target: chr8 (Bit Score: 187; Significance: 1e-101; HSPs: 12)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 30 - 272
Target Start/End: Original strand, 14318747 - 14318989
Alignment:
Q  30 ttctcttactctaaatcatccatcaattctcgaatgcatgagtgaattgctggaaccataaatctgtaaaacactgttaggagatacgcttggtgtggtt 129  Q
    |||| ||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  14318747 ttctattattctaaatcatccatcaattctctaatgcatgagtgaattgctggaaccataaatctgtaaaatactgttaggagatacgcttggtgtggtt 14318846  T
Q  130 gtgcaatacacgtcaaggagctcatagtatactgaaggggattcgctggtcattcctattgcatccaatatagagttattggtgggggcgaatcgaacct 229  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||||||||||||| | |||||||||||||||||||||||||    
T  14318847 gtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtgggggcgaatcgaacct 14318946  T
Q  230 aaaggatggcgttgcaaccccatgcgctttgagttttacatgc 272  Q
    ||||| | | || |||||||||| |||||||||||||||||||    
T  14318947 aaaggttagtgtggcaaccccatacgctttgagttttacatgc 14318989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 30 - 272
Target Start/End: Original strand, 26982008 - 26982250
Alignment:
Q  30 ttctcttactctaaatcatccatcaattctcgaatgcatgagtgaattgctggaaccataaatctgtaaaacactgttaggagatacgcttggtgtggtt 129  Q
    |||| ||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  26982008 ttctattattctaaatcatccatcaattctctaatgcatgagtgaattgctggaaccataaatctgtaaaatactgttaggagatacgcttggtgtggtt 26982107  T
Q  130 gtgcaatacacgtcaaggagctcatagtatactgaaggggattcgctggtcattcctattgcatccaatatagagttattggtgggggcgaatcgaacct 229  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||||||||||||| | |||||||||||||||||||||||||    
T  26982108 gtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtgggggcgaatcgaacct 26982207  T
Q  230 aaaggatggcgttgcaaccccatgcgctttgagttttacatgc 272  Q
    ||||| | | || |||||||||| |||||||||||||||||||    
T  26982208 aaaggttagtgtggcaaccccatacgctttgagttttacatgc 26982250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 183; E-Value: 5e-99
Query Start/End: Original strand, 30 - 272
Target Start/End: Original strand, 14315043 - 14315285
Alignment:
Q  30 ttctcttactctaaatcatccatcaattctcgaatgcatgagtgaattgctggaaccataaatctgtaaaacactgttaggagatacgcttggtgtggtt 129  Q
    |||| ||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  14315043 ttctattattctaaatcatccatcaattctctaatgcatgagtgaattgctggaaccataaatctgtaaaatactgttaggagatacgcttggtgtggtt 14315142  T
Q  130 gtgcaatacacgtcaaggagctcatagtatactgaaggggattcgctggtcattcctattgcatccaatatagagttattggtgggggcgaatcgaacct 229  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||| ||||||| ||||||||||||||||| | |||||||||||||||||||||||||    
T  14315143 gtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcatttctattgcatccaatatacatttattggtgggggcgaatcgaacct 14315242  T
Q  230 aaaggatggcgttgcaaccccatgcgctttgagttttacatgc 272  Q
    ||||| | | || |||||||||| |||||||||||||||||||    
T  14315243 aaaggttagtgtggcaaccccatacgctttgagttttacatgc 14315285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 183; E-Value: 5e-99
Query Start/End: Original strand, 30 - 272
Target Start/End: Complemental strand, 34108301 - 34108059
Alignment:
Q  30 ttctcttactctaaatcatccatcaattctcgaatgcatgagtgaattgctggaaccataaatctgtaaaacactgttaggagatacgcttggtgtggtt 129  Q
    |||| ||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  34108301 ttctattattctaaatcatccatcaattctctaatgcatgagtgaattgctggaaccataaatctgtaaaatactgttaggagatacgcttggtgtggtt 34108202  T
Q  130 gtgcaatacacgtcaaggagctcatagtatactgaaggggattcgctggtcattcctattgcatccaatatagagttattggtgggggcgaatcgaacct 229  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||||||||||||| | |||||||||||||||||||||||||    
T  34108201 gtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtgggggcgaatcgaacct 34108102  T
Q  230 aaaggatggcgttgcaaccccatgcgctttgagttttacatgc 272  Q
    ||||| | | || |||||||||| |||||||| ||||||||||    
T  34108101 aaaggttagtgtggcaaccccatacgctttgatttttacatgc 34108059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 30 - 272
Target Start/End: Original strand, 26987121 - 26987363
Alignment:
Q  30 ttctcttactctaaatcatccatcaattctcgaatgcatgagtgaattgctggaaccataaatctgtaaaacactgttaggagatacgcttggtgtggtt 129  Q
    |||| ||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  26987121 ttctattattctaaatcatccatcaattctctaatgcatgagtgaattgctggaaccataaatctgtaaaatactgttaggagatacgcttggtgtggtt 26987220  T
Q  130 gtgcaatacacgtcaaggagctcatagtatactgaaggggattcgctggtcattcctattgcatccaatatagagttattggtgggggcgaatcgaacct 229  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||||||||||||| | |||||||||||||||||||||||||    
T  26987221 gtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtgggggcgaatcgaacct 26987320  T
Q  230 aaaggatggcgttgcaaccccatgcgctttgagttttacatgc 272  Q
    ||||| | | || |||||| ||| |||||| ||||||||||||    
T  26987321 aaaggttagtgtggcaaccacatacgctttaagttttacatgc 26987363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 171; E-Value: 7e-92
Query Start/End: Original strand, 30 - 272
Target Start/End: Original strand, 43956981 - 43957223
Alignment:
Q  30 ttctcttactctaaatcatccatcaattctcgaatgcatgagtgaattgctggaaccataaatctgtaaaacactgttaggagatacgcttggtgtggtt 129  Q
    |||||||| |||||||||||||||||||||| |||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||    
T  43956981 ttctcttattctaaatcatccatcaattctctaatgcatgagtgaattgctgaaaccataaatttgtaaaacactgttaggagatacgcttggtgtggtt 43957080  T
Q  130 gtgcaatacacgtcaaggagctcatagtatactgaaggggattcgctggtcattcctattgcatccaatatagagttattggtgggggcgaatcgaacct 229  Q
    |||||||||||||||| || ||||||| || ||||||||||||||| ||||||||||||||||||||||||| | |||||||||||||||||||||||||    
T  43957081 gtgcaatacacgtcaaagaactcatagaatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtgggggcgaatcgaacct 43957180  T
Q  230 aaaggatggcgttgcaaccccatgcgctttgagttttacatgc 272  Q
    ||||| | | ||  ||||||||| |||||||| ||||||||||    
T  43957181 aaaggttagtgtgacaaccccatacgctttgaattttacatgc 43957223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 19 - 272
Target Start/End: Original strand, 10341078 - 10341330
Alignment:
Q  19 attctccctctttctcttactctaaatcatccatcaattctcgaatgcatgagtgaattgctggaaccataaatctgtaaaacactgttaggagatacgc 118  Q
    |||||||||| ||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||||||| | |||||||||||||||    
T  10341078 attctccctcattctcttactctaaatcatccataaattctctaatgcatgagtgaattgctggaatcataaatctgtaaaatattgttaggagatacgc 10341177  T
Q  119 ttggtgtggttgtgcaatacacgtcaaggagctcatagtatactgaaggggattcgctggtcattcctattgcatccaatatagagttattggtgggggc 218  Q
    ||||||| |||||||||||||||||||||| ||||||||||  |||||||||||||| | ||| ||||||||||||||||||| ||||||||||||||||    
T  10341178 ttggtgtagttgtgcaatacacgtcaaggaactcatagtatcatgaaggggattcgccgatcactcctattgcatccaatatacagttattggtgggggc 10341277  T
Q  219 gaatcgaacctaaaggatggcgttgcaaccccatgcgctttgagttttacatgc 272  Q
    ||||||||||||| || | |  | |||| |||||||||||||||||||||||||    
T  10341278 gaatcgaacctaa-ggttagtatggcaatcccatgcgctttgagttttacatgc 10341330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 19 - 272
Target Start/End: Original strand, 18608749 - 18609002
Alignment:
Q  19 attctccctctttctcttactctaaatcatccatcaattctcgaatgcatgagtgaattgctggaaccataaatctgtaaaacactgttaggagatacgc 118  Q
    |||||||||| ||||||||||||||||||||||||||||||| ||||||||||| |||||  ||||| |||||||||||||| |||||||||||||||||    
T  18608749 attctccctcattctcttactctaaatcatccatcaattctctaatgcatgagttaattgacggaacgataaatctgtaaaatactgttaggagatacgc 18608848  T
Q  119 ttggtgtggttgtgcaatacacgtcaaggagctcatagtatactgaaggggattcgctggtcattcctattgcatccaatatagagttattggtgggggc 218  Q
    |||||||||||||||||||||| ||||||| |||||| ||| ||||||||||||  ||||||||||||||| ||||||||||| | ||||||||||||||    
T  18608849 ttggtgtggttgtgcaatacacatcaaggaactcatattatcctgaaggggatttactggtcattcctatttcatccaatatacaattattggtgggggc 18608948  T
Q  219 gaatcgaacctaaaggatggcgttgcaaccccatgcgctttgagttttacatgc 272  Q
    |||| ||||||||||| | | || ||||||||||| ||||||||||||||||||    
T  18608949 gaattgaacctaaaggttagtgtggcaaccccatgtgctttgagttttacatgc 18609002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 19 - 272
Target Start/End: Original strand, 25953280 - 25953533
Alignment:
Q  19 attctccctctttctcttactctaaatcatccatcaattctcgaatgcatgagtgaattgctggaaccataaatctgtaaaacactgttaggagatacgc 118  Q
    ||||||| || ||||| |||||||||||||||||||||| || ||||||||||||||||||| ||||||||||| |||| || |||||||||||||||||    
T  25953280 attctccatcattctcatactctaaatcatccatcaattgtctaatgcatgagtgaattgcttgaaccataaatatgtacaatactgttaggagatacgc 25953379  T
Q  119 ttggtgtggttgtgcaatacacgtcaaggagctcatagtatactgaaggggattcgctggtcattcctattgcatccaatatagagttattggtgggggc 218  Q
    | |||||||||||||||||||||||||||| |||||||||  ||||||||||||||| |||||||||||||||||||| |||| ||||||||||||||||    
T  25953380 taggtgtggttgtgcaatacacgtcaaggaactcatagtaccctgaaggggattcgccggtcattcctattgcatccattatacagttattggtgggggc 25953479  T
Q  219 gaatcgaacctaaaggatggcgttgcaaccccatgcgctttgagttttacatgc 272  Q
    |||||| || |||||| | | || |||||||||||| |||||||||||||||||    
T  25953480 gaatcgtacttaaaggttagtgtggcaaccccatgcactttgagttttacatgc 25953533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 30 - 267
Target Start/End: Complemental strand, 18885136 - 18884899
Alignment:
Q  30 ttctcttactctaaatcatccatcaattctcgaatgcatgagtgaattgctggaaccataaatctgtaaaacactgttaggagatacgcttggtgtggtt 129  Q
    |||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||  |||||| |||||| |||||||||| ||    
T  18885136 ttctcttactctaaatcatcaatcaattctctaatgcatgagtgaattgctggaaccataaatctgtaaaatcctgttaagagatatgcttggtgtgatt 18885037  T
Q  130 gtgcaatacacgtcaaggagctcatagtatactgaaggggattcgctggtcattcctattgcatccaatatagagttattggtgggggcgaatcgaacct 229  Q
    ||||||||||| ||||||| || | ||||| ||||||||| ||| ||||||||||| |||| ||||||| || ||| |||||||||||||||||||||||    
T  18885036 gtgcaatacacatcaaggaacttaaagtatcctgaagggggttcactggtcattcccattgaatccaatctacagtaattggtgggggcgaatcgaacct 18884937  T
Q  230 aaaggatggcgttgcaaccccatgcgctttgagtttta 267  Q
    ||| | | | || |||||||||| || |||||||||||    
T  18884936 aaatgttagtgtggcaaccccatacgttttgagtttta 18884899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 30 - 117
Target Start/End: Original strand, 18494308 - 18494395
Alignment:
Q  30 ttctcttactctaaatcatccatcaattctcgaatgcatgagtgaattgctggaaccataaatctgtaaaacactgttaggagatacg 117  Q
    |||| ||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  18494308 ttctattattctaaatcatccatcaattctctaatgcatgagtgaattgctggaaccataaatctgtaaaatactgttaggagatacg 18494395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 23 - 72
Target Start/End: Complemental strand, 1781918 - 1781869
Alignment:
Q  23 tccctctttctcttactctaaatcatccatcaattctcgaatgcatgagt 72  Q
    |||||| ||||||||||| |||||||||| |||||||| ||| |||||||    
T  1781918 tccctcattctcttactcaaaatcatccaccaattctctaattcatgagt 1781869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 187; Significance: 1e-101; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 30 - 272
Target Start/End: Complemental strand, 21275845 - 21275603
Alignment:
Q  30 ttctcttactctaaatcatccatcaattctcgaatgcatgagtgaattgctggaaccataaatctgtaaaacactgttaggagatacgcttggtgtggtt 129  Q
    |||| ||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  21275845 ttctattattctaaatcatccatcaattctctaatgcatgagtgaattgctggaaccataaatctgtaaaatactgttaggagatacgcttggtgtggtt 21275746  T
Q  130 gtgcaatacacgtcaaggagctcatagtatactgaaggggattcgctggtcattcctattgcatccaatatagagttattggtgggggcgaatcgaacct 229  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||||||||||||| | |||||||||||||||||||||||||    
T  21275745 gtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtgggggcgaatcgaacct 21275646  T
Q  230 aaaggatggcgttgcaaccccatgcgctttgagttttacatgc 272  Q
    ||||| | | || |||||||||| |||||||||||||||||||    
T  21275645 aaaggttagtgtggcaaccccatacgctttgagttttacatgc 21275603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 19 - 272
Target Start/End: Original strand, 24508949 - 24509202
Alignment:
Q  19 attctccctctttctcttactctaaatcatccatcaattctcgaatgcatgagtgaattgctggaaccataaatctgtaaaacactgttaggagatacgc 118  Q
    ||||||| || |||| |||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||||| ||||||| |||||||||||||||||    
T  24508949 attctccatcattcttttactctaaatcatccatcaattctctaatgcatgagtgaattgttggaatcataaatttgtaaaatactgttaggagatacgc 24509048  T
Q  119 ttggtgtggttgtgcaatacacgtcaaggagctcatagtatactgaaggggattcgctggtcattcctattgcatccaatatagagttattggtgggggc 218  Q
    |||||||||||||||||||||||||||||| ||||||||||  |||||||||||||| | ||||||||||||||||||||||| ||||||||||||||||    
T  24509049 ttggtgtggttgtgcaatacacgtcaaggaactcatagtattatgaaggggattcgccgatcattcctattgcatccaatatatagttattggtgggggc 24509148  T
Q  219 gaatcgaacctaaaggatggcgttgcaaccccatgcgctttgagttttacatgc 272  Q
    |||||||||||||||| | |  | ||||||||||||| ||||||||||||||||    
T  24509149 gaatcgaacctaaaggttagtatggcaaccccatgcgttttgagttttacatgc 24509202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 171; E-Value: 7e-92
Query Start/End: Original strand, 30 - 272
Target Start/End: Original strand, 20752250 - 20752492
Alignment:
Q  30 ttctcttactctaaatcatccatcaattctcgaatgcatgagtgaattgctggaaccataaatctgtaaaacactgttaggagatacgcttggtgtggtt 129  Q
    |||||||||| ||| ||||||||||||||||  |||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  20752250 ttctcttactataagtcatccatcaattctctgatgcatgagtgaattgttggaaccataaatctgtaaaatactgttaggagatacgcttggtgtggtt 20752349  T
Q  130 gtgcaatacacgtcaaggagctcatagtatactgaaggggattcgctggtcattcctattgcatccaatatagagttattggtgggggcgaatcgaacct 229  Q
    ||||||||||||||||||| ||| |||||| ||||||||||||||| ||||||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  20752350 gtgcaatacacgtcaaggaactcgtagtatcctgaaggggattcgccggtcattcctattgcatccaatatacagttatttgtgggggcgaatcgaacct 20752449  T
Q  230 aaaggatggcgttgcaaccccatgcgctttgagttttacatgc 272  Q
    ||||| | |  | ||||||||||| ||||||||||||||||||    
T  20752450 aaaggttagtatggcaaccccatgtgctttgagttttacatgc 20752492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 19 - 272
Target Start/End: Complemental strand, 24509786 - 24509533
Alignment:
Q  19 attctccctctttctcttactctaaatcatccatcaattctcgaatgcatgagtgaattgctggaaccataaatctgtaaaacactgttaggagatacgc 118  Q
    ||||||| || |||| ||||| |||||||||||||||||||| ||||||| ||||||||| ||||||||||||| ||||||| |||||||||||||||||    
T  24509786 attctccatcattcttttactttaaatcatccatcaattctctaatgcattagtgaattgttggaaccataaatttgtaaaatactgttaggagatacgc 24509687  T
Q  119 ttggtgtggttgtgcaatacacgtcaaggagctcatagtatactgaaggggattcgctggtcattcctattgcatccaatatagagttattggtgggggc 218  Q
     ||||||||||||||||||||| ||||||| ||||||||||  |||||||||||||| | ||||||||||||||||||||||| ||||||||||||||||    
T  24509686 atggtgtggttgtgcaatacacatcaaggaactcatagtattatgaaggggattcgccgatcattcctattgcatccaatatatagttattggtgggggc 24509587  T
Q  219 gaatcgaacctaaaggatggcgttgcaaccccatgcgctttgagttttacatgc 272  Q
    |||||||||||||||| | |  | ||||||||||||| ||||||||||||||||    
T  24509586 gaatcgaacctaaaggttagtatggcaaccccatgcgatttgagttttacatgc 24509533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 31 - 272
Target Start/End: Complemental strand, 21937641 - 21937400
Alignment:
Q  31 tctcttactctaaatcatccatcaattctcgaatgcatgagtgaattgctggaaccataaatctgtaaaacactgttaggagatacgcttggtgtggttg 130  Q
    ||||||| |||||| ||||||||||||||| ||||||||||||||||||||||||||||||| |||| || | ||||| |||||||||||||||||||||    
T  21937641 tctcttattctaaaacatccatcaattctcaaatgcatgagtgaattgctggaaccataaatttgtataatattgttacgagatacgcttggtgtggttg 21937542  T
Q  131 tgcaatacacgtcaaggagctcatagtatactgaaggggattcgctggtcattcctattgcatccaatatagagttattggtgggggcgaatcgaaccta 230  Q
    ||||||||||  |||||| |||||||||| || |||||||||||| |||||||||||||||||||||||||  |||||||||||||||||||||| ||||    
T  21937541 tgcaatacacaacaaggaactcatagtatcctaaaggggattcgccggtcattcctattgcatccaatatatggttattggtgggggcgaatcgagccta 21937442  T
Q  231 aaggatggcgttgcaaccccatgcgctttgagttttacatgc 272  Q
    |||| | |  | | ||||||||||||||||||||||| ||||    
T  21937441 aaggttagtatggaaaccccatgcgctttgagttttatatgc 21937400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 19 - 272
Target Start/End: Original strand, 21936801 - 21937054
Alignment:
Q  19 attctccctctttctcttactctaaatcatccatcaattctcgaatgcatgagtgaattgctggaaccataaatctgtaaaacactgttaggagatacgc 118  Q
    ||||||| || ||||| |||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| | | ||||||||||| |    
T  21936801 attctccatcattctcatactctaaatcatctatcaattctctaatgcatgagtgaattgctggaaccataaatctgtaaaatattattaggagatacac 21936900  T
Q  119 ttggtgtggttgtgcaatacacgtcaaggagctcatagtatactgaaggggattcgctggtcattcctattgcatccaatatagagttattggtgggggc 218  Q
    | | |||||||||||||||||| ||||||| |||||||||| ||||||||||||| | |  ||||||||||||||| |||||| | |||||||||||| |    
T  21936901 tcgatgtggttgtgcaatacacatcaaggaactcatagtattctgaaggggattctccgaccattcctattgcatctaatatacaattattggtggggac 21937000  T
Q  219 gaatcgaacctaaaggatggcgttgcaaccccatgcgctttgagttttacatgc 272  Q
    ||||||| |||||||| | |  | | ||||| |||| |||||||||||||||||    
T  21937001 gaatcgagcctaaaggttagtatggaaaccctatgcactttgagttttacatgc 21937054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 19 - 270
Target Start/End: Complemental strand, 2887573 - 2887326
Alignment:
Q  19 attctccctctttctcttactctaaatcatccatcaattctcgaatgcatgagtgaattgctggaaccataaatctgtaaaacactgttaggagatacgc 118  Q
    |||||||||| |||||||||||||||||||||||||| |||| ||||||||||||||||||||||| ||||||||||||||| | ||||| ||||||       
T  2887573 attctccctcattctcttactctaaatcatccatcaactctctaatgcatgagtgaattgctggaatcataaatctgtaaaatagtgttaagagatatat 2887474  T
Q  119 ttggtgtggttgtgcaatacacgtcaaggagctcatagtatactgaaggggattcgctggtcattcc-tattgcatccaatatagagttattggtggggg 217  Q
    |||||||||||||||||||||||| |||||  |||||||||  ||||| |||||||  ||||||||| |||||||||||||| |     |||||||||||    
T  2887473 ttggtgtggttgtgcaatacacgtgaaggaattcatagtatcgtgaagaggattcgtcggtcattccttattgcatccaataaa-----attggtggggg 2887379  T
Q  218 cgaatcgaacctaaaggatggcgttgcaaccccatgcgctttgagttttacat 270  Q
    ||||||||||||||| | | | ||  |||||||||||||||||||||||||||    
T  2887378 cgaatcgaacctaaatgttagtgtgacaaccccatgcgctttgagttttacat 2887326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 19 - 270
Target Start/End: Complemental strand, 2889295 - 2889048
Alignment:
Q  19 attctccctctttctcttactctaaatcatccatcaattctcgaatgcatgagtgaattgctggaaccataaatctgtaaaacactgttaggagatacgc 118  Q
    |||||||||| ||||||||||||||||||| |||||| |||| ||||||||||||||||||||||| ||||||||||||||| | ||||| ||||||       
T  2889295 attctccctcattctcttactctaaatcattcatcaactctctaatgcatgagtgaattgctggaatcataaatctgtaaaatagtgttaagagatatat 2889196  T
Q  119 ttggtgtggttgtgcaatacacgtcaaggagctcatagtatactgaaggggattcgctggtcattcc-tattgcatccaatatagagttattggtggggg 217  Q
    |||||||||||||||||||||||| |||||  |||||||||  ||||| |||||||| ||||||||| |||||||||||||| |     |||||||||||    
T  2889195 ttggtgtggttgtgcaatacacgtgaaggaattcatagtatcgtgaagaggattcgccggtcattccttattgcatccaataaa-----attggtggggg 2889101  T
Q  218 cgaatcgaacctaaaggatggcgttgcaaccccatgcgctttgagttttacat 270  Q
    ||||||||||||||| | | | ||  |||||||||||||||||||||||||||    
T  2889100 cgaatcgaacctaaatgttagtgtgacaaccccatgcgctttgagttttacat 2889048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 19 - 216
Target Start/End: Original strand, 11183287 - 11183484
Alignment:
Q  19 attctccctctttctcttactctaaatcatccatcaattctcgaatgcatgagtgaattgctggaaccataaatctgtaaaacactgttaggagatacgc 118  Q
    |||||| ||| |||||||||||||||||||| |||||||||| ||||||||||| |||||||| ||||||||| |||||||| |||||||||||||||      
T  11183287 attctctctcattctcttactctaaatcatcaatcaattctctaatgcatgagtaaattgctgaaaccataaacctgtaaaatactgttaggagatacat 11183386  T
Q  119 ttggtgtggttgtgcaatacacgtcaaggagctcatagtatactgaaggggattcgctggtcattcctattgcatccaatatagagttattggtgggg 216  Q
    |||||||||||||| ||||||| ||||||| |||||| |||  |||| ||||||| ||| ||||||| ||  ||||||||||| ||||||||||||||    
T  11183387 ttggtgtggttgtgtaatacacatcaaggaactcataatatcttgaatgggattcactgatcattcccatcacatccaatatacagttattggtgggg 11183484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 204 - 272
Target Start/End: Complemental strand, 12909527 - 12909459
Alignment:
Q  204 gttattggtgggggcgaatcgaacctaaaggatggcgttgcaaccccatgcgctttgagttttacatgc 272  Q
    ||||||||||||||||||||||||||||||| | | || |||||||||||||||||||  |||||||||    
T  12909527 gttattggtgggggcgaatcgaacctaaaggttagtgtggcaaccccatgcgctttgaagtttacatgc 12909459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 204 - 272
Target Start/End: Complemental strand, 12934634 - 12934566
Alignment:
Q  204 gttattggtgggggcgaatcgaacctaaaggatggcgttgcaaccccatgcgctttgagttttacatgc 272  Q
    |||||||||||||||||||||||| |||||| | | || |||||||||||||||||||  |||||||||    
T  12934634 gttattggtgggggcgaatcgaacataaaggttagtgtggcaaccccatgcgctttgaagtttacatgc 12934566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 187; Significance: 1e-101; HSPs: 11)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 30 - 272
Target Start/End: Complemental strand, 39903917 - 39903675
Alignment:
Q  30 ttctcttactctaaatcatccatcaattctcgaatgcatgagtgaattgctggaaccataaatctgtaaaacactgttaggagatacgcttggtgtggtt 129  Q
    |||| ||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  39903917 ttctattattctaaatcatccatcaattctctaatgcatgagtgaattgctggaaccataaatctgtaaaatactgttaggagatacgcttggtgtggtt 39903818  T
Q  130 gtgcaatacacgtcaaggagctcatagtatactgaaggggattcgctggtcattcctattgcatccaatatagagttattggtgggggcgaatcgaacct 229  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||||||||||||| | |||||||||||||||||||||||||    
T  39903817 gtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtgggggcgaatcgaacct 39903718  T
Q  230 aaaggatggcgttgcaaccccatgcgctttgagttttacatgc 272  Q
    ||||| | | || |||||||||| |||||||||||||||||||    
T  39903717 aaaggttagtgtggcaaccccatacgctttgagttttacatgc 39903675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 30 - 272
Target Start/End: Complemental strand, 39909030 - 39908788
Alignment:
Q  30 ttctcttactctaaatcatccatcaattctcgaatgcatgagtgaattgctggaaccataaatctgtaaaacactgttaggagatacgcttggtgtggtt 129  Q
    |||| ||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  39909030 ttctattattctaaatcatccatcaattctctaatgcatgagtgaattgctggaaccataaatctgtaaaatactgttaggagatacgcttggtgtggtt 39908931  T
Q  130 gtgcaatacacgtcaaggagctcatagtatactgaaggggattcgctggtcattcctattgcatccaatatagagttattggtgggggcgaatcgaacct 229  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||||||||||||| | |||||||||||||||||||||||||    
T  39908930 gtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtgggggcgaatcgaacct 39908831  T
Q  230 aaaggatggcgttgcaaccccatgcgctttgagttttacatgc 272  Q
    ||||| | | || |||||||||| |||||||||||||||||||    
T  39908830 aaaggttagtgtggcaaccccatacgctttgagttttacatgc 39908788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 183; E-Value: 5e-99
Query Start/End: Original strand, 30 - 272
Target Start/End: Original strand, 9872556 - 9872798
Alignment:
Q  30 ttctcttactctaaatcatccatcaattctcgaatgcatgagtgaattgctggaaccataaatctgtaaaacactgttaggagatacgcttggtgtggtt 129  Q
    |||| ||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  9872556 ttctattattctaaatcatccatcaattctctaatgcatgagtgaattgctggaaccataaatctgtaaaatactgttaggagatacgcttggtgtggtt 9872655  T
Q  130 gtgcaatacacgtcaaggagctcatagtatactgaaggggattcgctggtcattcctattgcatccaatatagagttattggtgggggcgaatcgaacct 229  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||||||||||||| | |||||||||||||||||||||||||    
T  9872656 gtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtgggggcgaatcgaacct 9872755  T
Q  230 aaaggatggcgttgcaaccccatgcgctttgagttttacatgc 272  Q
    ||||| | | || |||||||||| | |||||||||||||||||    
T  9872756 aaaggttagtgtggcaaccccatacactttgagttttacatgc 9872798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 183; E-Value: 5e-99
Query Start/End: Original strand, 30 - 272
Target Start/End: Original strand, 9877671 - 9877913
Alignment:
Q  30 ttctcttactctaaatcatccatcaattctcgaatgcatgagtgaattgctggaaccataaatctgtaaaacactgttaggagatacgcttggtgtggtt 129  Q
    |||| ||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  9877671 ttctattattctaaatcatccatcaattctctaatgcatgagtgaattgctggaaccataaatctgtaaaatactgttaggagatacgcttggtgtggtt 9877770  T
Q  130 gtgcaatacacgtcaaggagctcatagtatactgaaggggattcgctggtcattcctattgcatccaatatagagttattggtgggggcgaatcgaacct 229  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||||||||||||| | |||||||||||||||||||||||||    
T  9877771 gtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtgggggcgaatcgaacct 9877870  T
Q  230 aaaggatggcgttgcaaccccatgcgctttgagttttacatgc 272  Q
    ||||| | | || |||||||||| | |||||||||||||||||    
T  9877871 aaaggttagtgtggcaaccccatacactttgagttttacatgc 9877913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 30 - 272
Target Start/End: Complemental strand, 2023036 - 2022793
Alignment:
Q  30 ttctcttactctaaatcatccatcaattctcgaatgcatgagtgaattgctggaaccataaatctgtaaaacactgttaggagatacgcttggtgtggtt 129  Q
    |||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||    
T  2023036 ttctcttattctaaatcatccatcaattctctaatgcatgagtgaattgctggaaccataaatctgtaaaatactgttaggagatacgcttggtttggtt 2022937  T
Q  130 gtgcaatacacgtcaaggagctcatagtatactgaaggggattcgctggtcattcc-tattgcatccaatatagagttattggtgggggcgaatcgaacc 228  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||| ||||||||| ||||||||| |||||| |||||||||||||||||||| |||||    
T  2022936 gtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattccttattgcatcaaatatacagttattggtgggggcgaatggaacc 2022837  T
Q  229 taaaggatggcgttgcaaccccatgcgctttgagttttacatgc 272  Q
    |||||| | |  | |||||| |||||||||||||||||||||||    
T  2022836 taaaggttagtatggcaacctcatgcgctttgagttttacatgc 2022793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 30 - 272
Target Start/End: Original strand, 13556437 - 13556679
Alignment:
Q  30 ttctcttactctaaatcatccatcaattctcgaatgcatgagtgaattgctggaaccataaatctgtaaaacactgttaggagatacgcttggtgtggtt 129  Q
    |||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||| || |||||||||||||||||||||||||    
T  13556437 ttctcttattctaaatcatccatcaattctctaatgcatgagtgaattgctggaaccataaatatgtaaaatacggttaggagatacgcttggtgtggtt 13556536  T
Q  130 gtgcaatacacgtcaaggagctcatagtatactgaaggggattcgctggtcattcctattgcatccaatatagagttattggtgggggcgaatcgaacct 229  Q
    ||||||||||||||||||| |||||||||| || |||||||||||  | ||||||||||||||||||||||| | ||||||||||||||||||||| ||     
T  13556537 gtgcaatacacgtcaaggaactcatagtatcctaaaggggattcgtcgatcattcctattgcatccaatatacatttattggtgggggcgaatcgagcca 13556636  T
Q  230 aaaggatggcgttgcaaccccatgcgctttgagttttacatgc 272  Q
    ||||| | | || |||||||||| |||||||||||||||||||    
T  13556637 aaaggttagtgtggcaaccccatacgctttgagttttacatgc 13556679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 144; E-Value: 9e-76
Query Start/End: Original strand, 19 - 272
Target Start/End: Original strand, 35369012 - 35369279
Alignment:
Q  19 attctccctctttctcttactctaaatcatccatcaattctcgaatgcatgagtgaattgctggaaccataaatctgtaaaacactgttaggagatacgc 118  Q
    ||||| |||| ||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||||||||| ||| |||||||||||||    
T  35369012 attcttcctcattctcttactctaaatcatccatcaattctctaatgcatgagtgaattgttgtaaccataaatctgtaaaatactattaggagatacgc 35369111  T
Q  119 ttggtgtggttgtgcaatacacgtcaaggagctcatagtatactgaaggggattcgctggtcattcctattg-----------catccaatatagagtta 207  Q
    |||||||||||||||||||||| ||||||| |||||||||| |||| |||||||||||||||||||||||||           ||||||||||| |||||    
T  35369112 ttggtgtggttgtgcaatacacatcaaggaactcatagtatcctgagggggattcgctggtcattcctattgcatccaatatacatccaatatacagtta 35369211  T
Q  208 ttggtgggggcgaatcgaacctaaaggatggcgttgcaacccc---atgcgctttgagttttacatgc 272  Q
    |||||||| |||||||||||||||||  | | || ||||||||   ||||||||||||||||||||||    
T  35369212 ttggtgggtgcgaatcgaacctaaagattagtgtggcaacccccatatgcgctttgagttttacatgc 35369279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 30 - 272
Target Start/End: Complemental strand, 25184164 - 25183924
Alignment:
Q  30 ttctcttactctaaatcatccatcaattctcgaatgcatgagtgaattgctggaaccataaatctgtaaaacactgttaggagatacgcttggtgtggtt 129  Q
    ||||||||||||||||||||||||||||||| |||| || ||||||||||| |||      |||||||||| | |||| ||||||||||||||| |||||    
T  25184164 ttctcttactctaaatcatccatcaattctctaatgtattagtgaattgctagaa------atctgtaaaatattgtttggagatacgcttggtatggtt 25184071  T
Q  130 gtgcaatacacgtcaaggagctcatagtatactgaaggggattcgctggtcattcctattgcatccaatatagagttattggtgggggcgaatcgaacct 229  Q
    |||||||| |||||||||| |||||||||| ||||||||||||||| ||| | ||||||||||||||||||| ||||||||||||||| |||||||||||    
T  25184070 gtgcaataaacgtcaaggaactcatagtatcctgaaggggattcgccggtaactcctattgcatccaatatacagttattggtgggggagaatcgaacct 25183971  T
Q  230 aaaggatggcgttgcaac----cccatgcgctttgagttttacatgc 272  Q
    ||||||| | || |||||    |||||||||||| ||||||||||||    
T  25183970 aaaggatagtgtggcaacccggcccatgcgctttcagttttacatgc 25183924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 48 - 272
Target Start/End: Complemental strand, 43378491 - 43378267
Alignment:
Q  48 tccatcaattctcgaatgcatgagtgaattgctggaaccataaatctgtaaaacactgttaggagatacgcttggtgtggttgtgcaatacacgtcaagg 147  Q
    ||||||||||||  ||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||  |||| ||||||||||||||||||||    
T  43378491 tccatcaattctttaatgcattagtgaattgctggaaccataaatctgtaaaatactgttaggagatacgcttaatgtgattgtgcaatacacgtcaagg 43378392  T
Q  148 agctcatagtatactgaaggggattcgctggtcattcctattgcatccaatatagagttattggtgggggcgaatcgaacctaaaggatggcgttgcaac 247  Q
    | || ||| ||| ||||||||||||| || |||||||| |||||||| |||||| | |||||||||||||  ||||||||||||| | | | ||  ||||    
T  43378391 aactaataatatcctgaaggggattcacttgtcattccaattgcatcaaatatacaattattggtgggggtaaatcgaacctaaatgttagtgtgacaac 43378292  T
Q  248 cccatgcgctttgagttttacatgc 272  Q
    |||||||||||||||||||||||||    
T  43378291 cccatgcgctttgagttttacatgc 43378267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 30 - 232
Target Start/End: Complemental strand, 4555725 - 4555522
Alignment:
Q  30 ttctcttactctaaatcatccatcaattctcgaatgcatgagtgaattgctggaaccataaatctgtaaaacactgttaggagatacgcttggtgtggtt 129  Q
    |||| |||||||||||||||||| ||||||| ||||||||||||||||  ||| ||||||||||||||||| | ||||| || ||| | |||||||| ||    
T  4555725 ttctattactctaaatcatccattaattctctaatgcatgagtgaattattggtaccataaatctgtaaaataatgttaagaaatatgtttggtgtgatt 4555626  T
Q  130 gtgcaatacacgtcaaggagctcatagtatactgaaggggattcgctggtcattcctattgcatccaatatagagttattggt-gggggcgaatcgaacc 228  Q
     |||||||||| |||| || ||| || |||  |||| || ||| | |||||||||||||||||||||||||| ||||||||||  ||| |||||| ||||    
T  4555625 ttgcaatacacatcaatgaactcgtaatatcttgaaaggaatttgttggtcattcctattgcatccaatatacagttattggtaagggacgaatcaaacc 4555526  T
Q  229 taaa 232  Q
    ||||    
T  4555525 taaa 4555522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 67
Target Start/End: Original strand, 43540881 - 43540928
Alignment:
Q  20 ttctccctctttctcttactctaaatcatccatcaattctcgaatgca 67  Q
    |||||| || |||||||||||||||||||| |||||||||| ||||||    
T  43540881 ttctccatcattctcttactctaaatcatctatcaattctctaatgca 43540928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 187; Significance: 1e-101; HSPs: 23)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 30 - 272
Target Start/End: Complemental strand, 4049879 - 4049637
Alignment:
Q  30 ttctcttactctaaatcatccatcaattctcgaatgcatgagtgaattgctggaaccataaatctgtaaaacactgttaggagatacgcttggtgtggtt 129  Q
    |||| ||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  4049879 ttctattattctaaatcatccatcaattctctaatgcatgagtgaattgctggaaccataaatctgtaaaatactgttaggagatacgcttggtgtggtt 4049780  T
Q  130 gtgcaatacacgtcaaggagctcatagtatactgaaggggattcgctggtcattcctattgcatccaatatagagttattggtgggggcgaatcgaacct 229  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||||||||||||| | |||||||||||||||||||||||||    
T  4049779 gtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtgggggcgaatcgaacct 4049680  T
Q  230 aaaggatggcgttgcaaccccatgcgctttgagttttacatgc 272  Q
    ||||| | | || |||||||||| |||||||||||||||||||    
T  4049679 aaaggttagtgtggcaaccccatacgctttgagttttacatgc 4049637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 30 - 272
Target Start/End: Original strand, 5458144 - 5458386
Alignment:
Q  30 ttctcttactctaaatcatccatcaattctcgaatgcatgagtgaattgctggaaccataaatctgtaaaacactgttaggagatacgcttggtgtggtt 129  Q
    |||| ||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  5458144 ttctattattctaaatcatccatcaattctctaatgcatgagtgaattgctggaaccataaatctgtaaaatactgttaggagatacgcttggtgtggtt 5458243  T
Q  130 gtgcaatacacgtcaaggagctcatagtatactgaaggggattcgctggtcattcctattgcatccaatatagagttattggtgggggcgaatcgaacct 229  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||||||||||||| | |||||||||||||||||||||||||    
T  5458244 gtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtgggggcgaatcgaacct 5458343  T
Q  230 aaaggatggcgttgcaaccccatgcgctttgagttttacatgc 272  Q
    ||||| | | || |||||||||| |||||||||||||||||||    
T  5458344 aaaggttagtgtggcaaccccatacgctttgagttttacatgc 5458386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 30 - 272
Target Start/End: Original strand, 5481620 - 5481862
Alignment:
Q  30 ttctcttactctaaatcatccatcaattctcgaatgcatgagtgaattgctggaaccataaatctgtaaaacactgttaggagatacgcttggtgtggtt 129  Q
    |||| ||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  5481620 ttctattattctaaatcatccatcaattctctaatgcatgagtgaattgctggaaccataaatctgtaaaatactgttaggagatacgcttggtgtggtt 5481719  T
Q  130 gtgcaatacacgtcaaggagctcatagtatactgaaggggattcgctggtcattcctattgcatccaatatagagttattggtgggggcgaatcgaacct 229  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||||||||||||| | |||||||||||||||||||||||||    
T  5481720 gtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtgggggcgaatcgaacct 5481819  T
Q  230 aaaggatggcgttgcaaccccatgcgctttgagttttacatgc 272  Q
    ||||| | | || |||||||||| |||||||||||||||||||    
T  5481820 aaaggttagtgtggcaaccccatacgctttgagttttacatgc 5481862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 30 - 272
Target Start/End: Complemental strand, 8458383 - 8458141
Alignment:
Q  30 ttctcttactctaaatcatccatcaattctcgaatgcatgagtgaattgctggaaccataaatctgtaaaacactgttaggagatacgcttggtgtggtt 129  Q
    |||| ||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  8458383 ttctattattctaaatcatccatcaattctctaatgcatgagtgaattgctggaaccataaatctgtaaaatactgttaggagatacgcttggtgtggtt 8458284  T
Q  130 gtgcaatacacgtcaaggagctcatagtatactgaaggggattcgctggtcattcctattgcatccaatatagagttattggtgggggcgaatcgaacct 229  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||||||||||||| | |||||||||||||||||||||||||    
T  8458283 gtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtgggggcgaatcgaacct 8458184  T
Q  230 aaaggatggcgttgcaaccccatgcgctttgagttttacatgc 272  Q
    ||||| | | || |||||||||| |||||||||||||||||||    
T  8458183 aaaggttagtgtggcaaccccatacgctttgagttttacatgc 8458141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 30 - 272
Target Start/End: Original strand, 10673070 - 10673312
Alignment:
Q  30 ttctcttactctaaatcatccatcaattctcgaatgcatgagtgaattgctggaaccataaatctgtaaaacactgttaggagatacgcttggtgtggtt 129  Q
    |||| ||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  10673070 ttctattattctaaatcatccatcaattctctaatgcatgagtgaattgctggaaccataaatctgtaaaatactgttaggagatacgcttggtgtggtt 10673169  T
Q  130 gtgcaatacacgtcaaggagctcatagtatactgaaggggattcgctggtcattcctattgcatccaatatagagttattggtgggggcgaatcgaacct 229  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||||||||||||| | |||||||||||||||||||||||||    
T  10673170 gtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtgggggcgaatcgaacct 10673269  T
Q  230 aaaggatggcgttgcaaccccatgcgctttgagttttacatgc 272  Q
    ||||| | | || |||||||||| |||||||||||||||||||    
T  10673270 aaaggttagtgtggcaaccccatacgctttgagttttacatgc 10673312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 30 - 272
Target Start/End: Original strand, 10678185 - 10678427
Alignment:
Q  30 ttctcttactctaaatcatccatcaattctcgaatgcatgagtgaattgctggaaccataaatctgtaaaacactgttaggagatacgcttggtgtggtt 129  Q
    |||| ||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  10678185 ttctattattctaaatcatccatcaattctctaatgcatgagtgaattgctggaaccataaatctgtaaaatactgttaggagatacgcttggtgtggtt 10678284  T
Q  130 gtgcaatacacgtcaaggagctcatagtatactgaaggggattcgctggtcattcctattgcatccaatatagagttattggtgggggcgaatcgaacct 229  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||||||||||||| | |||||||||||||||||||||||||    
T  10678285 gtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtgggggcgaatcgaacct 10678384  T
Q  230 aaaggatggcgttgcaaccccatgcgctttgagttttacatgc 272  Q
    ||||| | | || |||||||||| |||||||||||||||||||    
T  10678385 aaaggttagtgtggcaaccccatacgctttgagttttacatgc 10678427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 183; E-Value: 5e-99
Query Start/End: Original strand, 30 - 272
Target Start/End: Original strand, 1302377 - 1302619
Alignment:
Q  30 ttctcttactctaaatcatccatcaattctcgaatgcatgagtgaattgctggaaccataaatctgtaaaacactgttaggagatacgcttggtgtggtt 129  Q
    |||| ||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  1302377 ttctattattctaaatcatccatcaattctctaatgcatgagtgaattgctggaaccataaatctgtaaaatactgttaggagatacgcttggtgtggtt 1302476  T
Q  130 gtgcaatacacgtcaaggagctcatagtatactgaaggggattcgctggtcattcctattgcatccaatatagagttattggtgggggcgaatcgaacct 229  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||||||||||||| | ||||||||||||||| |||||||||    
T  1302477 gtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtgggggcgtatcgaacct 1302576  T
Q  230 aaaggatggcgttgcaaccccatgcgctttgagttttacatgc 272  Q
    ||||| | | || |||||||||| |||||||||||||||||||    
T  1302577 aaaggttagtgtggcaaccccatacgctttgagttttacatgc 1302619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 183; E-Value: 5e-99
Query Start/End: Original strand, 30 - 272
Target Start/End: Original strand, 6853084 - 6853326
Alignment:
Q  30 ttctcttactctaaatcatccatcaattctcgaatgcatgagtgaattgctggaaccataaatctgtaaaacactgttaggagatacgcttggtgtggtt 129  Q
    |||| ||| |||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  6853084 ttctattattctaaatcatccatcaattctctaatgcacgagtgaattgctggaaccataaatctgtaaaatactgttaggagatacgcttggtgtggtt 6853183  T
Q  130 gtgcaatacacgtcaaggagctcatagtatactgaaggggattcgctggtcattcctattgcatccaatatagagttattggtgggggcgaatcgaacct 229  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||||||||||||| | |||||||||||||||||||||||||    
T  6853184 gtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtgggggcgaatcgaacct 6853283  T
Q  230 aaaggatggcgttgcaaccccatgcgctttgagttttacatgc 272  Q
    ||||| | | || |||||||||| |||||||||||||||||||    
T  6853284 aaaggttagtgtggcaaccccatacgctttgagttttacatgc 6853326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 183; E-Value: 5e-99
Query Start/End: Original strand, 30 - 272
Target Start/End: Complemental strand, 8464822 - 8464580
Alignment:
Q  30 ttctcttactctaaatcatccatcaattctcgaatgcatgagtgaattgctggaaccataaatctgtaaaacactgttaggagatacgcttggtgtggtt 129  Q
    |||| ||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  8464822 ttctattattctaaatcatccatcaattctctaatgcatgagtgaattgctggaaccataaatctgtaaaatactgttaggagatacgcttggtgtggtt 8464723  T
Q  130 gtgcaatacacgtcaaggagctcatagtatactgaaggggattcgctggtcattcctattgcatccaatatagagttattggtgggggcgaatcgaacct 229  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||||||||||||| | |||||||| ||||||||||||||||    
T  8464722 gtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggttggggcgaatcgaacct 8464623  T
Q  230 aaaggatggcgttgcaaccccatgcgctttgagttttacatgc 272  Q
    ||||| | | || |||||||||| |||||||||||||||||||    
T  8464622 aaaggttagtgtggcaaccccatacgctttgagttttacatgc 8464580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 183; E-Value: 5e-99
Query Start/End: Original strand, 30 - 272
Target Start/End: Original strand, 10591427 - 10591669
Alignment:
Q  30 ttctcttactctaaatcatccatcaattctcgaatgcatgagtgaattgctggaaccataaatctgtaaaacactgttaggagatacgcttggtgtggtt 129  Q
    |||| ||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  10591427 ttctattattctaaatcatccatcaattctctaatgcatgagtgaattgctggaaccataaatctgtaaaatactgttaggagatacgcttggtgtggtt 10591526  T
Q  130 gtgcaatacacgtcaaggagctcatagtatactgaaggggattcgctggtcattcctattgcatccaatatagagttattggtgggggcgaatcgaacct 229  Q
    |||||||||||||||| || |||||||||| ||||||||||||||| ||||||||||||||||||||||||| | |||||||||||||||||||||||||    
T  10591527 gtgcaatacacgtcaatgaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtgggggcgaatcgaacct 10591626  T
Q  230 aaaggatggcgttgcaaccccatgcgctttgagttttacatgc 272  Q
    ||||| | | || |||||||||| |||||||||||||||||||    
T  10591627 aaaggttagtgtggcaaccccatacgctttgagttttacatgc 10591669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 30 - 272
Target Start/End: Original strand, 6858187 - 6858429
Alignment:
Q  30 ttctcttactctaaatcatccatcaattctcgaatgcatgagtgaattgctggaaccataaatctgtaaaacactgttaggagatacgcttggtgtggtt 129  Q
    |||| ||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  6858187 ttctattattctaaatcatccatcaattctctaatgcatgagtgaattgctggaaccataaatctgtaaaatactgttaggagatacgcttggtgtggtt 6858286  T
Q  130 gtgcaatacacgtcaaggagctcatagtatactgaaggggattcgctggtcattcctattgcatccaatatagagttattggtgggggcgaatcgaacct 229  Q
    ||||||||||||||||||| ||||||||||  ||||||||||| || ||||||||||||||||||||||||| | |||||||||||||||||||||||||    
T  6858287 gtgcaatacacgtcaaggaactcatagtatcttgaaggggatttgccggtcattcctattgcatccaatatacatttattggtgggggcgaatcgaacct 6858386  T
Q  230 aaaggatggcgttgcaaccccatgcgctttgagttttacatgc 272  Q
    ||||| | | || |||||||||| |||||||||||||||||||    
T  6858387 aaaggttagtgtggcaaccccatacgctttgagttttacatgc 6858429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 30 - 272
Target Start/End: Original strand, 31076534 - 31076776
Alignment:
Q  30 ttctcttactctaaatcatccatcaattctcgaatgcatgagtgaattgctggaaccataaatctgtaaaacactgttaggagatacgcttggtgtggtt 129  Q
    |||| ||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||    
T  31076534 ttctattattctaaatcatccatcaattctctaatgcatgagtgaattgctggaaccataaatctgtaaaatactgttaggagatacgtttggtgtggtt 31076633  T
Q  130 gtgcaatacacgtcaaggagctcatagtatactgaaggggattcgctggtcattcctattgcatccaatatagagttattggtgggggcgaatcgaacct 229  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||  ||||||||||||||||||||||||| | |||||||||||||||||||||||||    
T  31076634 gtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgtcggtcattcctattgcatccaatatacatttattggtgggggcgaatcgaacct 31076733  T
Q  230 aaaggatggcgttgcaaccccatgcgctttgagttttacatgc 272  Q
    ||||| | | || |||||||||| |||||||||||||||||||    
T  31076734 aaaggttagtgtggcaaccccatacgctttgagttttacatgc 31076776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 30 - 272
Target Start/End: Original strand, 31081639 - 31081881
Alignment:
Q  30 ttctcttactctaaatcatccatcaattctcgaatgcatgagtgaattgctggaaccataaatctgtaaaacactgttaggagatacgcttggtgtggtt 129  Q
    |||| ||| |||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| |||||||||||||||| |||||||||||    
T  31081639 ttctattattctaaatcatccatcaattctctaatgcatgagtgaattgttggaaccataaatctgtaaaatactgttaggagatacgtttggtgtggtt 31081738  T
Q  130 gtgcaatacacgtcaaggagctcatagtatactgaaggggattcgctggtcattcctattgcatccaatatagagttattggtgggggcgaatcgaacct 229  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||||||||||||| | |||||||||||||||||||||||||    
T  31081739 gtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtgggggcgaatcgaacct 31081838  T
Q  230 aaaggatggcgttgcaaccccatgcgctttgagttttacatgc 272  Q
    ||||| | | || |||||||||| |||||||||||||||||||    
T  31081839 aaaggttagtgtggcaaccccatacgctttgagttttacatgc 31081881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 30 - 272
Target Start/End: Complemental strand, 4055013 - 4054771
Alignment:
Q  30 ttctcttactctaaatcatccatcaattctcgaatgcatgagtgaattgctggaaccataaatctgtaaaacactgttaggagatacgcttggtgtggtt 129  Q
    |||| ||| |||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  4055013 ttctattattctaaatcatccatcaattctttaatgcatgagtgaattgctggaaccataaatctgtaaaatactgttaggagatacgcttggtgtggtt 4054914  T
Q  130 gtgcaatacacgtcaaggagctcatagtatactgaaggggattcgctggtcattcctattgcatccaatatagagttattggtgggggcgaatcgaacct 229  Q
    ||||||||||||| ||||| |||||||||| ||||||||||||||  ||||||||||||||||||||||||| | |||||||||||||||||||||||||    
T  4054913 gtgcaatacacgttaaggaactcatagtatcctgaaggggattcgtcggtcattcctattgcatccaatatacatttattggtgggggcgaatcgaacct 4054814  T
Q  230 aaaggatggcgttgcaaccccatgcgctttgagttttacatgc 272  Q
    ||||| | | || |||||||||| |||||||||||||||||||    
T  4054813 aaaggttagtgtggcaaccccatacgctttgagttttacatgc 4054771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 30 - 272
Target Start/End: Original strand, 33702732 - 33702974
Alignment:
Q  30 ttctcttactctaaatcatccatcaattctcgaatgcatgagtgaattgctggaaccataaatctgtaaaacactgttaggagatacgcttggtgtggtt 129  Q
    |||| ||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  33702732 ttctattattctaaatcatccatcaattctctaatgcatgagtgaattgctggaaccataaatatgtaaaatactgttaggagatacgcttggtgtggtt 33702831  T
Q  130 gtgcaatacacgtcaaggagctcatagtatactgaaggggattcgctggtcattcctattgcatccaatatagagttattggtgggggcgaatcgaacct 229  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||  |||||||||||||||||||||||| | ||||||||||| |||||||||||||    
T  33702832 gtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccagtcattcctattgcatccaatatacatttattggtgggagcgaatcgaacct 33702931  T
Q  230 aaaggatggcgttgcaaccccatgcgctttgagttttacatgc 272  Q
    ||||| | | || |||||||||| |||||||||||||||||||    
T  33702932 aaaggttagtgtggcaaccccatacgctttgagttttacatgc 33702974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 171; E-Value: 7e-92
Query Start/End: Original strand, 30 - 272
Target Start/End: Complemental strand, 33703371 - 33703130
Alignment:
Q  30 ttctcttactctaaatcatccatcaattctcgaatgcatgagtgaattgctggaaccataaatctgtaaaacactgttaggagatacgcttggtgtggtt 129  Q
    |||| ||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||    
T  33703371 ttctattattctaaatcatccatcaattctctaatgcatgagtgaattgctggaaccataaatctgtaaaatactattaggagatacgcttggtgtggtt 33703272  T
Q  130 gtgcaatacacgtcaaggagctcatagtatactgaaggggattcgctggtcattcctattgcatccaatatagagttattggtgggggcgaatcgaacct 229  Q
    ||||||||||||||||||| |||||||||| |||||  |||||||| ||||||||||||||||||||||||| | |||||||||||||||||||||||||    
T  33703271 gtgcaatacacgtcaaggaactcatagtatcctgaa-cggattcgccggtcattcctattgcatccaatatacatttattggtgggggcgaatcgaacct 33703173  T
Q  230 aaaggatggcgttgcaaccccatgcgctttgagttttacatgc 272  Q
    ||||| | | || |||||||||| |||||||||||||||||||    
T  33703172 aaaggttagtgtggcaaccccatacgctttgagttttacatgc 33703130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 19 - 272
Target Start/End: Complemental strand, 29827507 - 29827258
Alignment:
Q  19 attctccctctttctcttactctaaatcatccatcaattctcgaatgcatgagtgaattgctggaaccataaatctgtaaaacactgttaggagatacgc 118  Q
    |||||||||| ||||||||||||||||||| ||||||||||| ||||||||||||||||||||     |||||||||||||| ||||||||||||||| |    
T  29827507 attctccctcattctcttactctaaatcattcatcaattctctaatgcatgagtgaattgctg-----ataaatctgtaaaatactgttaggagataccc 29827413  T
Q  119 ttggtgtggttgtgcaatacacgtcaaggagctcatagtatactgaaggggattcgctggtcattcctattgcatccaatatagagttattggtgggggc 218  Q
    |||||||||||||||||||||||||||||| ||||||||||  |||||||||||||| ||||  ||||||||||||||||||| | |||||||||| |||    
T  29827412 ttggtgtggttgtgcaatacacgtcaaggaactcatagtatcttgaaggggattcgccggtcgctcctattgcatccaatatacaattattggtggaggc 29827313  T
Q  219 gaatcgaacctaaagg-atggcgttgcaaccccatgcgctttgagttttacatgc 272  Q
    ||||||||||||||||  | | || | ||||||||||||||||||||||||||||    
T  29827312 gaatcgaacctaaaggtttagtgtggtaaccccatgcgctttgagttttacatgc 29827258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 19 - 272
Target Start/End: Complemental strand, 20891142 - 20890891
Alignment:
Q  19 attctccctctttctcttactctaaatcatccatcaattctcgaatgcatgagtgaattgctggaaccataaatctgtaaaacactgttaggagatacgc 118  Q
    |||||||||| ||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||||    
T  20891142 attctccctcattcgcttactctaaatcatccatcaattctctaatgcatgagtgaattgctggaaccataaatctataaaatactgttaagagatacgc 20891043  T
Q  119 ttggtgtggttgtgcaatacacgtcaaggagctcatagtatactgaaggggattcgctggtcattcctattgcatccaatatagagttattggtgggggc 218  Q
    || ||||| ||||| ||||||| ||||||| |||||||||| ||||||||||||| || ||||||| |||||||||||||||| |||||||||| || ||    
T  20891042 tttgtgtgattgtgtaatacacatcaaggaactcatagtat-ctgaaggggattcactagtcattcatattgcatccaatatacagttattggt-ggcgc 20890945  T
Q  219 gaatcgaacctaaaggatggcgttgcaaccccatgcgctttgagttttacatgc 272  Q
    ||||| ||| |||||| | | || |||||||||| |||||||||||||||||||    
T  20890944 gaatcaaacttaaaggttagtgtggcaaccccatacgctttgagttttacatgc 20890891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 102 - 272
Target Start/End: Original strand, 10586386 - 10586556
Alignment:
Q  102 actgttaggagatacgcttggtgtggttgtgcaatacacgtcaaggagctcatagtatactgaaggggattcgctggtcattcctattgcatccaatata 201  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||| ||||||||||||||| |||||||||||||||||||||||||    
T  10586386 actgttaggagatacgcttggcgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatata 10586485  T
Q  202 gagttattggtgggggcgaatcgaacctaaaggatggcgttgcaaccccatgcgctttgagttttacatgc 272  Q
     | |||||||||||||||||||||||||||||| | | || |||||| ||| |||||||||||||||||||    
T  10586486 catttattggtgggggcgaatcgaacctaaaggttagtgtggcaacctcatacgctttgagttttacatgc 10586556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 19 - 234
Target Start/End: Original strand, 3187575 - 3187788
Alignment:
Q  19 attctccctctttctcttactctaaatcatccatcaattctcgaatgcatgagtgaattgctggaaccataaatctgtaaaacactgttaggagatacgc 118  Q
    |||||||||| |||||||||||||||||||| |||||||||  ||||||||||||||||||| ||||||||||||||||||| | ||||| ||||||| |    
T  3187575 attctccctcattctcttactctaaatcatctatcaattctttaatgcatgagtgaattgctcgaaccataaatctgtaaaatattgttaagagatacac 3187674  T
Q  119 ttggtgtggttgtgcaatacacgtcaaggagctcatagtatactgaaggggattcgctggtcattcctattgcatccaatatagagttattggtgggggc 218  Q
    || ||||  ||||||||||||| ||||| | ||||| |||| || ||||||||||||  |||||||||||||||||||||||| |||||||||  || ||    
T  3187675 tttgtgtaattgtgcaatacacatcaagaaactcat-gtatccttaaggggattcgccagtcattcctattgcatccaatatatagttattgg-cggagc 3187772  T
Q  219 gaatcgaacctaaagg 234  Q
    ||||||||||| ||||    
T  3187773 gaatcgaaccttaagg 3187788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 19 - 217
Target Start/End: Complemental strand, 49784579 - 49784378
Alignment:
Q  19 attctccctctttctcttactctaaatcatccatcaattctcgaatgcatgagtgaattgctggaaccataaatctgtaaaacactgttaggagatacgc 118  Q
    |||| ||||| |||| ||||| ||||||||| |||||||||| ||| |||||||||||||||||||||||||||||| |||| | |||||||||||| |     
T  49784579 attccccctcattcttttactttaaatcatctatcaattctctaattcatgagtgaattgctggaaccataaatctggaaaatattgttaggagatatgt 49784480  T
Q  119 ttggtgtggttgtgcaatacacgtcaaggagctcata--gtatactgaaggggattcgctggtcattcc-tattgcatccaatatagagttattggtggg 215  Q
    ||||| ||||||||||||||||||||| || ||||||  ||||  ||||||||||||||  |||||||| |||||||||||||||| |||||||||||||    
T  49784479 ttggtatggttgtgcaatacacgtcaaagaactcatagtgtatcttgaaggggattcgccagtcattccttattgcatccaatatacagttattggtggg 49784380  T
Q  216 gg 217  Q
    ||    
T  49784379 gg 49784378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 19 - 201
Target Start/End: Original strand, 18024269 - 18024450
Alignment:
Q  19 attctccctctttctcttactctaaatcatccatcaattctcgaatgcatgagtgaattgctggaaccataaatctgtaaaacactgttaggagatacgc 118  Q
    |||||||||| ||||||||||||||||||| ||||||||||| ||||||||| ||||||| | |||| |||||||||||||| | |||||  ||||||||    
T  18024269 attctccctcattctcttactctaaatcattcatcaattctctaatgcatgaatgaattgttagaacaataaatctgtaaaatattgttaacagatacgc 18024368  T
Q  119 ttggtgtggttgtgcaatacacgtcaaggagctcatagtatactgaaggggattcgctggtcattcctattgcatccaatata 201  Q
    |||||||| ||||||||||||| | ||  | |||||||||| |||||||  ||||||||||||||||||||||||| ||||||    
T  18024369 ttggtgtgattgtgcaatacacat-aaaaaactcatagtatcctgaaggatattcgctggtcattcctattgcatcaaatata 18024450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 30 - 106
Target Start/End: Original strand, 10584990 - 10585066
Alignment:
Q  30 ttctcttactctaaatcatccatcaattctcgaatgcatgagtgaattgctggaaccataaatctgtaaaacactgt 106  Q
    |||| ||| |||||||||||||||||||||| ||||||||||||||| ||| ||||||||||||||||||| |||||    
T  10584990 ttctattattctaaatcatccatcaattctctaatgcatgagtgaatagctagaaccataaatctgtaaaatactgt 10585066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 183; Significance: 5e-99; HSPs: 9)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 183; E-Value: 5e-99
Query Start/End: Original strand, 30 - 272
Target Start/End: Original strand, 17720658 - 17720900
Alignment:
Q  30 ttctcttactctaaatcatccatcaattctcgaatgcatgagtgaattgctggaaccataaatctgtaaaacactgttaggagatacgcttggtgtggtt 129  Q
    |||| ||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  17720658 ttctattattctaaatcatccatcaattctctaatgcatgagtgaattgctggaaccataaatctgtaaaatactgttaggagatacgcttggtgtggtt 17720757  T
Q  130 gtgcaatacacgtcaaggagctcatagtatactgaaggggattcgctggtcattcctattgcatccaatatagagttattggtgggggcgaatcgaacct 229  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||||||||||||| | |||||||||||||||||||||||||    
T  17720758 gtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtgggggcgaatcgaacct 17720857  T
Q  230 aaaggatggcgttgcaaccccatgcgctttgagttttacatgc 272  Q
    ||||| |   || |||||||||| |||||||||||||||||||    
T  17720858 aaaggttaatgtggcaaccccatacgctttgagttttacatgc 17720900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 183; E-Value: 5e-99
Query Start/End: Original strand, 30 - 272
Target Start/End: Complemental strand, 45120458 - 45120216
Alignment:
Q  30 ttctcttactctaaatcatccatcaattctcgaatgcatgagtgaattgctggaaccataaatctgtaaaacactgttaggagatacgcttggtgtggtt 129  Q
    |||| ||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  45120458 ttctattattctaaatcatccatcaattctccaatgcatgagtgaattgctggaaccataaatctgtaaaatactgttaggagatacgcttggtgtggtt 45120359  T
Q  130 gtgcaatacacgtcaaggagctcatagtatactgaaggggattcgctggtcattcctattgcatccaatatagagttattggtgggggcgaatcgaacct 229  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||||||||||||| | |||||||||||||||| ||||||||    
T  45120358 gtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtgggggcgagtcgaacct 45120259  T
Q  230 aaaggatggcgttgcaaccccatgcgctttgagttttacatgc 272  Q
    ||||| | | || |||||||||| |||||||||||||||||||    
T  45120258 aaaggttagtgtggcaaccccatacgctttgagttttacatgc 45120216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 30 - 272
Target Start/End: Original strand, 14917514 - 14917756
Alignment:
Q  30 ttctcttactctaaatcatccatcaattctcgaatgcatgagtgaattgctggaaccataaatctgtaaaacactgttaggagatacgcttggtgtggtt 129  Q
    |||| ||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  14917514 ttctattattctaaatcatccatcaattctctaatgcatgagtgaattgctggaaccataaatctgtaaaatactgttaggagatacgcttggtgtggtt 14917613  T
Q  130 gtgcaatacacgtcaaggagctcatagtatactgaaggggattcgctggtcattcctattgcatccaatatagagttattggtgggggcgaatcgaacct 229  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||| ||||||| ||||||||||||||||| | |||||||||| ||||||||||||||    
T  14917614 gtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcatttctattgcatccaatatacatttattggtggaggcgaatcgaacct 14917713  T
Q  230 aaaggatggcgttgcaaccccatgcgctttgagttttacatgc 272  Q
    ||||| | | || |||||||||| |||||||||||||||||||    
T  14917714 aaaggttagtgtggcaaccccatacgctttgagttttacatgc 14917756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 19 - 266
Target Start/End: Original strand, 30283562 - 30283809
Alignment:
Q  19 attctccctctttctcttactctaaatcatccatcaattctcgaatgcatgagtgaattgctggaaccataaatctgtaaaacactgttaggagatacgc 118  Q
    ||||||| || |||||||||||||||||||| |||||||||| ||||||||||||||||||| ||||||||||||||||||| ||| |||||||||||||    
T  30283562 attctccatccttctcttactctaaatcatcaatcaattctctaatgcatgagtgaattgctagaaccataaatctgtaaaatactattaggagatacgc 30283661  T
Q  119 ttggtgtggttgtgcaatacacgtcaaggagctcatagtatactgaaggggattcgctggtcattcctattgcatccaatatagagttattggtgggggc 218  Q
    |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||||||||||||| | ||||||||||||||    
T  30283662 ttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtgggggc 30283761  T
Q  219 gaatcgaacctaaaggatggcgttgcaaccccatgcgctttgagtttt 266  Q
    ||||||||| |||||| | | || |||||| ||| |||||||||||||    
T  30283762 gaatcgaacttaaaggttagtgtggcaaccacatacgctttgagtttt 30283809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 14 - 272
Target Start/End: Complemental strand, 16284526 - 16284266
Alignment:
Q  14 atattattctccctctttctcttactctaaa-tcatccatcaattctcgaatgcatgagtgaattgctggaaccataaatctgtaaaacactgttaggag 112  Q
    |||| |||||||||| ||||||||||||||| |||| |||||| |||| |||||||||||||||||||| ||||||||||| |||||| ||  |||||||    
T  16284526 atataattctccctcattctcttactctaaaatcattcatcaactctctaatgcatgagtgaattgctgaaaccataaatcagtaaaataccattaggag 16284427  T
Q  113 atacgcttggtgtggttgtgcaatacacgtcaaggagctcatagtatactgaa-ggggattcgctggtcattcctattgcatccaatatagagttattgg 211  Q
    ||||||||||||||||||| |||||||||||||||| |||||||||| ||||| |||||||||||||||||||||||||||||||||||| |||||||||    
T  16284426 atacgcttggtgtggttgtacaatacacgtcaaggaactcatagtatcctgaaaggggattcgctggtcattcctattgcatccaatatacagttattgg 16284327  T
Q  212 tgggggcgaatcgaacctaaaggatggcgttgcaaccccatgcgctttgagttttacatgc 272  Q
    ||||||||||||||||||||| | | | || ||||||||||||||||||||||||||||||    
T  16284326 tgggggcgaatcgaacctaaaaggtagtgtggcaaccccatgcgctttgagttttacatgc 16284266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 30 - 272
Target Start/End: Complemental strand, 42780256 - 42780013
Alignment:
Q  30 ttctcttactctaaatcatccatcaattctcgaatgcatgagtgaattgctggaaccataaatctgtaaaacactgttaggagatacgcttggtgtggtt 129  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| ||||||| |||||||||||||||  |||||||||||    
T  42780256 ttctcttactctaaatcatccatcaattctctaatgcatgagtgaattgttggaaccataaatttgtaaaatactgttaggagatacatttggtgtggtt 42780157  T
Q  130 gtgcaatacacgtcaaggagctcatagtatactgaaggggattcgctggtcattc-ctattgcatccaatatagagttattggtgggggcgaatcgaacc 228  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||| ||||||||  |||||||||||||||| ||||||||||||||||||||||||||    
T  42780156 gtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcgttattgcatccaatatacagttattggtgggggcgaatcgaacc 42780057  T
Q  229 taaaggatggcgttgcaaccccatgcgctttgagttttacatgc 272  Q
    |||||| | | || | ||||||||  ||||||||||||||||||    
T  42780056 taaaggttagtgtggtaaccccatatgctttgagttttacatgc 42780013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 19 - 139
Target Start/End: Complemental strand, 716350 - 716230
Alignment:
Q  19 attctccctctttctcttactctaaatcatccatcaattctcgaatgcatgagtgaattgctggaaccataaatctgtaaaacactgttaggagatacgc 118  Q
    ||||||| || ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||| || |||||||||||||     
T  716350 attctccttcattctcttactctaaatcatccatcaattctctaatgcatgagtgaattgctggaaccctaaatctgtaaaatacagttaggagatacgt 716251  T
Q  119 ttggtgtggttgtgcaataca 139  Q
    ||||||||||||| |||||||    
T  716250 ttggtgtggttgtacaataca 716230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 150 - 272
Target Start/End: Original strand, 39196124 - 39196246
Alignment:
Q  150 ctcatagtatactgaaggggattcgctggtcattcctattgcatccaatatagagttattggtgggggcgaatcgaacctaaaggatggcgttgcaaccc 249  Q
    |||||||||| ||||||||||||||| ||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| | | || |||||||    
T  39196124 ctcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtgggggcgaatcgaacctaaaggttagtgtggcaaccc 39196223  T
Q  250 catgcgctttgagttttacatgc 272  Q
    ||| |||||||||||||||||||    
T  39196224 catacgctttgagttttacatgc 39196246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 243 - 272
Target Start/End: Complemental strand, 716220 - 716191
Alignment:
Q  243 gcaaccccatgcgctttgagttttacatgc 272  Q
    ||||||||||||||||||||||||||||||    
T  716220 gcaaccccatgcgctttgagttttacatgc 716191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 177; Significance: 2e-95; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 19 - 272
Target Start/End: Complemental strand, 144181 - 143926
Alignment:
Q  19 attctccctctttctcttactct--aaatcatccatcaattctcgaatgcatgagtgaattgctggaaccataaatctgtaaaacactgttaggagatac 116  Q
    |||||||||| ||||||| ||||  ||||||||||| ||||||| |||||||||||||||||||| |||||||||||||||||| |||||||||||||||    
T  144181 attctccctcattctcttgctctctaaatcatccattaattctctaatgcatgagtgaattgctgaaaccataaatctgtaaaatactgttaggagatac 144082  T
Q  117 gcttggtgtggttgtgcaatacacgtcaaggagctcatagtatactgaaggggattcgctggtcattcctattgcatccaatatagagttattggtgggg 216  Q
    |||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| ||| | ||||||||||||||||||| ||||||||||||||    
T  144081 gcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtaactcctattgcatccaatatacagttattggtgggg 143982  T
Q  217 gcgaatcgaacctaaaggatggcgttgcaaccccatgcgctttgagttttacatgc 272  Q
    |||||||||||||||||| | | || ||||||||||||||||||| ||||||||||    
T  143981 gcgaatcgaacctaaaggttagtgtggcaaccccatgcgctttgaattttacatgc 143926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 149; Significance: 9e-79; HSPs: 2)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 149; E-Value: 9e-79
Query Start/End: Original strand, 30 - 214
Target Start/End: Original strand, 2151 - 2335
Alignment:
Q  30 ttctcttactctaaatcatccatcaattctcgaatgcatgagtgaattgctggaaccataaatctgtaaaacactgttaggagatacgcttggtgtggtt 129  Q
    |||| ||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  2151 ttctattattctaaatcatccatcaattctctaatgcatgagtgaattgctggaaccataaatctgtaaaatactgttaggagatacgcttggtgtggtt 2250  T
Q  130 gtgcaatacacgtcaaggagctcatagtatactgaaggggattcgctggtcattcctattgcatccaatatagagttattggtgg 214  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||||||||||||| | ||||||||||    
T  2251 gtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtgg 2335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 167 - 272
Target Start/End: Original strand, 7246 - 7351
Alignment:
Q  167 gggattcgctggtcattcctattgcatccaatatagagttattggtgggggcgaatcgaacctaaaggatggcgttgcaaccccatgcgctttgagtttt 266  Q
    ||||||||| ||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| | | || |||||||||| |||||||||||||    
T  7246 gggattcgccggtcattcctattgcatccaatatacatttattggtgggggcgaatcgaacctaaaggttagtgtggcaaccccatacgctttgagtttt 7345  T
Q  267 acatgc 272  Q
    ||||||    
T  7346 acatgc 7351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0391 (Bit Score: 94; Significance: 6e-46; HSPs: 1)
Name: scaffold0391
Description:

Target: scaffold0391; HSP #1
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 139 - 272
Target Start/End: Complemental strand, 16570 - 16437
Alignment:
Q  139 acgtcaaggagctcatagtatactgaaggggattcgctggtcattcctattgcatccaatatagagttattggtgggggcgaatcgaacctaaaggatgg 238  Q
    |||||||||| |||||||||| ||||||||||||||| ||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| | |    
T  16570 acgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtgggggcgaatcgaacctaaaggttag 16471  T
Q  239 cgttgcaaccccatgcgctttgagttttacatgc 272  Q
     || |||||||||| |||||||||||||||||||    
T  16470 tgtggcaaccccatacgctttgagttttacatgc 16437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 88; Significance: 2e-42; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 113 - 272
Target Start/End: Complemental strand, 170807 - 170648
Alignment:
Q  113 atacgcttggtgtggttgtgcaatacacgtcaaggagctcatagtatactgaaggggattcgctggtcattcctattgcatccaatatagagttattggt 212  Q
    ||||||||||||||||| |||||||||| | ||||| |||||||||| || |||||||||||| ||||||||||||||||||||||||| ||||||| ||    
T  170807 atacgcttggtgtggttctgcaatacacattaaggaactcatagtatcctaaaggggattcgcgggtcattcctattgcatccaatatacagttattagt 170708  T
Q  213 gggggcgaatcgaacctaaaggatggcgttgcaaccccatgcgctttgagttttacatgc 272  Q
    |||||| |||||||||||||||   | || | ||||||||| ||||| ||||||||||||    
T  170707 gggggcaaatcgaacctaaaggtcagtgtggaaaccccatgagctttaagttttacatgc 170648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 30 - 116
Target Start/End: Complemental strand, 173430 - 173344
Alignment:
Q  30 ttctcttactctaaatcatccatcaattctcgaatgcatgagtgaattgctggaaccataaatctgtaaaacactgttaggagatac 116  Q
    ||||||||||||||||||||||||||||||| |||| ||  |||||||||||||||||||||||| ||||| ||||||||| |||||    
T  173430 ttctcttactctaaatcatccatcaattctctaatgtataggtgaattgctggaaccataaatctctaaaatactgttaggggatac 173344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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