View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13109_high_36 (Length: 238)
Name: NF13109_high_36
Description: NF13109
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13109_high_36 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 221; Significance: 1e-122; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 221; E-Value: 1e-122
Query Start/End: Original strand, 18 - 238
Target Start/End: Complemental strand, 43740602 - 43740382
Alignment:
| Q |
18 |
caaaaggacttacaacagttgtcttgcatgtagtcctatatatattgtcgtctcacactactgtttaattgacatgtaaatgcagagaaaaagtgtaagc |
117 |
Q |
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| T |
43740602 |
caaaaggacttacaacagttgtcttgcatgtagtcctatatatattgtcgtctcacactactgtttaattgacatgtaaatgcagagaaaaagtgtaagc |
43740503 |
T |
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| Q |
118 |
aaaaagtaattgatattcatcagaacataattattcatacaaataaataacttgaatgtccgaatttataacaccattgccccccaacaatgcagatgga |
217 |
Q |
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| T |
43740502 |
aaaaagtaattgatattcatcagaacataattattcatacaaataaataacttgaatgtccgaatttataacaccattgccccccaacaatgcagatgga |
43740403 |
T |
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| Q |
218 |
gaaacccctgtccctgtcccc |
238 |
Q |
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| T |
43740402 |
gaaacccctgtccctgtcccc |
43740382 |
T |
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