View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1310_high_4 (Length: 496)

Name: NF1310_high_4
Description: NF1310
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1310_high_4
NF1310_high_4
[»] chr2 (54 HSPs)
chr2 (76-483)||(44297384-44297792)
chr2 (193-240)||(6592934-6592981)
chr2 (192-240)||(6510199-6510247)
chr2 (192-306)||(19206140-19206255)
chr2 (192-240)||(34679292-34679340)
chr2 (193-240)||(5470394-5470441)
chr2 (406-444)||(20606930-20606968)
chr2 (192-240)||(15023038-15023086)
chr2 (251-307)||(25375134-25375190)
chr2 (192-240)||(27489635-27489683)
chr2 (252-308)||(31025871-31025927)
chr2 (253-305)||(34679096-34679148)
chr2 (192-240)||(39918641-39918689)
chr2 (251-310)||(2755210-2755269)
chr2 (251-306)||(6592722-6592777)
chr2 (193-239)||(32969725-32969771)
chr2 (194-240)||(35718857-35718903)
chr2 (251-305)||(43028793-43028847)
chr2 (251-292)||(16238124-16238165)
chr2 (256-305)||(37343948-37343997)
chr2 (250-307)||(41454509-41454566)
chr2 (197-237)||(24472516-24472556)
chr2 (193-229)||(31827733-31827769)
chr2 (192-240)||(37431737-37431785)
chr2 (406-442)||(44296861-44296897)
chr2 (251-306)||(5470596-5470651)
chr2 (251-310)||(10741338-10741397)
chr2 (251-306)||(12542417-12542472)
chr2 (250-305)||(14489213-14489268)
chr2 (193-240)||(36195657-36195703)
chr2 (250-305)||(41454801-41454856)
chr2 (406-441)||(44986813-44986848)
chr2 (410-444)||(127744-127778)
chr2 (194-228)||(4925648-4925682)
chr2 (193-309)||(14489412-14489529)
chr2 (254-304)||(15022838-15022888)
chr2 (251-309)||(19885854-19885911)
chr2 (251-305)||(32661403-32661457)
chr2 (194-240)||(34761061-34761107)
chr2 (251-305)||(36286122-36286176)
chr2 (251-305)||(36286414-36286468)
chr2 (194-240)||(43028995-43029041)
chr2 (251-304)||(10857339-10857392)
chr2 (406-439)||(20354507-20354540)
chr2 (255-308)||(21024725-21024778)
chr2 (251-304)||(32661695-32661748)
chr2 (251-304)||(34470029-34470082)
chr2 (251-304)||(37552003-37552056)
chr2 (196-240)||(8857250-8857294)
chr2 (255-303)||(19399183-19399231)
chr2 (253-305)||(19889480-19889532)
chr2 (250-306)||(24472704-24472760)
chr2 (254-306)||(34600545-34600597)
chr2 (254-306)||(44244948-44245000)
[»] chr6 (31 HSPs)
chr6 (251-310)||(24119486-24119545)
chr6 (192-240)||(10727257-10727305)
chr6 (192-240)||(33401254-33401302)
chr6 (193-236)||(2203352-2203395)
chr6 (193-240)||(3579661-3579708)
chr6 (251-310)||(10727455-10727514)
chr6 (255-306)||(12730600-12730651)
chr6 (193-240)||(12766415-12766462)
chr6 (251-305)||(4037037-4037091)
chr6 (251-305)||(11307336-11307390)
chr6 (194-240)||(28011327-28011373)
chr6 (252-306)||(33399784-33399837)
chr6 (253-310)||(2203181-2203238)
chr6 (256-309)||(17248631-17248684)
chr6 (192-240)||(1377407-1377455)
chr6 (192-240)||(1385155-1385203)
chr6 (256-304)||(24418486-24418534)
chr6 (192-240)||(32143450-32143498)
chr6 (193-240)||(266188-266235)
chr6 (192-239)||(2840857-2840904)
chr6 (193-240)||(2853494-2853541)
chr6 (193-240)||(10727394-10727441)
chr6 (250-309)||(23349756-23349815)
chr6 (252-303)||(31175827-31175878)
chr6 (406-444)||(2138478-2138516)
chr6 (253-303)||(6036922-6036971)
chr6 (406-444)||(13084888-13084926)
chr6 (406-443)||(5312242-5312279)
chr6 (251-307)||(2853677-2853733)
chr6 (195-235)||(23585066-23585106)
chr6 (251-303)||(32591597-32591649)
[»] chr5 (46 HSPs)
chr5 (192-239)||(30603680-30603727)
chr5 (192-307)||(12406038-12406155)
chr5 (192-237)||(36798375-36798420)
chr5 (192-239)||(19340828-19340875)
chr5 (251-314)||(21066365-21066428)
chr5 (193-240)||(28446204-28446251)
chr5 (251-301)||(8006273-8006323)
chr5 (410-444)||(27345928-27345962)
chr5 (406-444)||(39466886-39466924)
chr5 (251-304)||(3333962-3334015)
chr5 (251-308)||(27904744-27904801)
chr5 (192-229)||(32391796-32391833)
chr5 (192-228)||(6130333-6130369)
chr5 (251-307)||(10331953-10332009)
chr5 (192-240)||(24405696-24405744)
chr5 (192-228)||(40276097-40276133)
chr5 (193-240)||(2974833-2974880)
chr5 (193-240)||(9852985-9853032)
chr5 (250-305)||(12406300-12406355)
chr5 (193-240)||(16132929-16132976)
chr5 (192-239)||(21066539-21066586)
chr5 (251-302)||(37897978-37898029)
chr5 (406-441)||(39467651-39467686)
chr5 (250-301)||(40133139-40133190)
chr5 (410-444)||(2029056-2029090)
chr5 (250-304)||(6131795-6131849)
chr5 (250-308)||(17235264-17235322)
chr5 (410-444)||(23253495-23253529)
chr5 (410-444)||(24565578-24565612)
chr5 (410-444)||(24606614-24606648)
chr5 (252-306)||(37887670-37887724)
chr5 (193-239)||(37897785-37897831)
chr5 (410-444)||(39937915-39937949)
chr5 (410-444)||(40372169-40372203)
chr5 (193-238)||(2974702-2974747)
chr5 (253-314)||(8284145-8284206)
chr5 (250-302)||(20630004-20630057)
chr5 (195-228)||(22300814-22300847)
chr5 (410-443)||(29595604-29595637)
chr5 (199-240)||(31080686-31080727)
chr5 (407-440)||(39467941-39467974)
chr5 (410-443)||(39936260-39936293)
chr5 (252-305)||(41083351-41083404)
chr5 (192-240)||(3333758-3333806)
chr5 (252-304)||(25693901-25693953)
chr5 (193-229)||(35166493-35166529)
[»] chr7 (50 HSPs)
chr7 (192-237)||(35250319-35250364)
chr7 (252-306)||(17931988-17932042)
chr7 (406-444)||(42818562-42818600)
chr7 (406-443)||(30581276-30581313)
chr7 (192-240)||(4049921-4049969)
chr7 (192-240)||(5172723-5172771)
chr7 (192-240)||(20185116-20185164)
chr7 (193-304)||(36903471-36903581)
chr7 (255-310)||(6792061-6792116)
chr7 (251-306)||(15107250-15107305)
chr7 (193-240)||(15348157-15348204)
chr7 (409-444)||(36611555-36611590)
chr7 (251-305)||(29163099-29163153)
chr7 (406-442)||(7329079-7329115)
chr7 (401-441)||(10590294-10590334)
chr7 (192-228)||(28472578-28472614)
chr7 (196-240)||(36580340-36580384)
chr7 (254-298)||(45717906-45717950)
chr7 (253-304)||(8409334-8409385)
chr7 (410-441)||(17114150-17114181)
chr7 (250-305)||(17167854-17167908)
chr7 (251-306)||(41243642-41243697)
chr7 (410-444)||(767141-767175)
chr7 (406-444)||(2403450-2403488)
chr7 (410-444)||(3314960-3314994)
chr7 (250-308)||(4049702-4049760)
chr7 (251-305)||(18201644-18201698)
chr7 (251-305)||(33159483-33159537)
chr7 (410-444)||(41965786-41965820)
chr7 (410-444)||(44876943-44876977)
chr7 (410-444)||(46491697-46491731)
chr7 (255-308)||(3318314-3318367)
chr7 (195-240)||(8074076-8074121)
chr7 (195-240)||(11374016-11374061)
chr7 (251-308)||(20184912-20184969)
chr7 (195-240)||(28785824-28785869)
chr7 (250-307)||(35250116-35250173)
chr7 (251-308)||(40790931-40790987)
chr7 (195-240)||(40872233-40872278)
chr7 (251-308)||(48925907-48925964)
chr7 (251-306)||(282862-282917)
chr7 (196-240)||(3247377-3247421)
chr7 (192-228)||(10097633-10097669)
chr7 (256-304)||(11742923-11742971)
chr7 (196-240)||(18186506-18186550)
chr7 (251-303)||(28472391-28472442)
chr7 (252-308)||(28786019-28786075)
chr7 (250-306)||(36204441-36204497)
chr7 (409-441)||(36611750-36611782)
chr7 (199-239)||(47909649-47909689)
[»] chr3 (68 HSPs)
chr3 (252-305)||(38957844-38957897)
chr3 (192-240)||(44436455-44436503)
chr3 (192-239)||(51315562-51315609)
chr3 (251-310)||(51315745-51315804)
chr3 (192-309)||(4474269-4474386)
chr3 (250-306)||(578671-578727)
chr3 (192-240)||(25154380-25154428)
chr3 (250-305)||(7569130-7569185)
chr3 (192-239)||(8024842-8024889)
chr3 (194-307)||(15978893-15979007)
chr3 (406-444)||(55336-55374)
chr3 (406-444)||(18745379-18745417)
chr3 (410-444)||(20807942-20807976)
chr3 (194-240)||(38958046-38958092)
chr3 (406-444)||(47571948-47571986)
chr3 (410-444)||(54308458-54308492)
chr3 (407-444)||(29516558-29516595)
chr3 (251-304)||(45125095-45125148)
chr3 (406-443)||(54753578-54753615)
chr3 (255-303)||(1814818-1814866)
chr3 (254-306)||(7218419-7218471)
chr3 (192-240)||(14349311-14349359)
chr3 (192-240)||(44585854-44585902)
chr3 (192-239)||(86762-86809)
chr3 (255-314)||(20432448-20432506)
chr3 (193-240)||(44436598-44436645)
chr3 (251-306)||(46934037-46934092)
chr3 (251-310)||(46934248-46934307)
chr3 (193-240)||(51315684-51315731)
chr3 (251-306)||(53255285-53255340)
chr3 (251-310)||(54716470-54716529)
chr3 (410-444)||(4706965-4706999)
chr3 (410-444)||(9830577-9830611)
chr3 (410-444)||(15287572-15287606)
chr3 (406-444)||(15288296-15288334)
chr3 (406-444)||(17353803-17353841)
chr3 (194-240)||(19404463-19404509)
chr3 (410-444)||(20808616-20808650)
chr3 (194-240)||(28712663-28712709)
chr3 (251-305)||(36567135-36567189)
chr3 (251-301)||(44586047-44586097)
chr3 (410-444)||(47571201-47571235)
chr3 (410-440)||(48626127-48626157)
chr3 (410-444)||(49349681-49349715)
chr3 (410-440)||(49350283-49350313)
chr3 (254-308)||(51187714-51187768)
chr3 (406-444)||(53346505-53346543)
chr3 (252-305)||(53568292-53568346)
chr3 (192-237)||(3192981-3193026)
chr3 (251-308)||(42686478-42686535)
chr3 (253-306)||(44433329-44433382)
chr3 (195-236)||(47189667-47189708)
chr3 (256-309)||(50725012-50725065)
chr3 (256-309)||(50787785-50787838)
chr3 (411-444)||(51920720-51920753)
chr3 (192-225)||(54719072-54719105)
chr3 (410-442)||(2226711-2226743)
chr3 (196-228)||(12759586-12759618)
chr3 (192-228)||(17773248-17773284)
chr3 (192-228)||(19074549-19074585)
chr3 (255-307)||(19404659-19404711)
chr3 (192-240)||(25902469-25902516)
chr3 (251-314)||(40410134-40410198)
chr3 (410-442)||(47677526-47677558)
chr3 (250-310)||(47922124-47922184)
chr3 (251-303)||(50802660-50802712)
chr3 (251-303)||(50873165-50873217)
chr3 (192-240)||(54464362-54464410)
[»] chr8 (42 HSPs)
chr8 (192-240)||(30539055-30539103)
chr8 (216-308)||(32071238-32071329)
chr8 (250-311)||(32498371-32498432)
chr8 (197-301)||(37939917-37940021)
chr8 (192-240)||(35213095-35213143)
chr8 (196-240)||(41487267-41487311)
chr8 (251-306)||(31947852-31947907)
chr8 (193-308)||(41487410-41487527)
chr8 (406-444)||(202578-202616)
chr8 (406-444)||(317415-317453)
chr8 (251-305)||(23702395-23702449)
chr8 (406-444)||(42094753-42094791)
chr8 (199-240)||(21486857-21486898)
chr8 (407-444)||(36180689-36180726)
chr8 (406-442)||(42664008-42664044)
chr8 (192-227)||(17070986-17071021)
chr8 (192-227)||(17577251-17577286)
chr8 (405-444)||(22632322-22632361)
chr8 (251-306)||(28349568-28349623)
chr8 (256-307)||(37263601-37263652)
chr8 (193-240)||(37813291-37813338)
chr8 (196-239)||(45177411-45177454)
chr8 (410-444)||(4402296-4402330)
chr8 (250-304)||(9878359-9878413)
chr8 (410-444)||(16911055-16911089)
chr8 (406-444)||(19220914-19220952)
chr8 (251-313)||(20853369-20853431)
chr8 (193-239)||(20853579-20853625)
chr8 (410-444)||(22632977-22633011)
chr8 (251-301)||(25896993-25897043)
chr8 (410-444)||(26847102-26847136)
chr8 (258-308)||(27545340-27545390)
chr8 (196-238)||(29657904-29657946)
chr8 (406-444)||(36182130-36182168)
chr8 (257-307)||(41602878-41602928)
chr8 (410-444)||(42094014-42094048)
chr8 (251-305)||(44807335-44807389)
chr8 (256-310)||(45515927-45515981)
chr8 (256-309)||(26919981-26920034)
chr8 (252-305)||(40021775-40021828)
chr8 (251-307)||(7658599-7658655)
chr8 (250-310)||(36624170-36624229)
[»] chr4 (75 HSPs)
chr4 (192-240)||(35393868-35393916)
chr4 (250-310)||(49869678-49869738)
chr4 (251-308)||(53312282-53312339)
chr4 (250-306)||(6207436-6207492)
chr4 (192-240)||(10059750-10059798)
chr4 (251-303)||(35615315-35615367)
chr4 (405-441)||(47156633-47156669)
chr4 (193-240)||(2181325-2181372)
chr4 (189-240)||(14060821-14060872)
chr4 (194-303)||(21957668-21957780)
chr4 (251-305)||(1186657-1186711)
chr4 (253-311)||(2017051-2017109)
chr4 (406-444)||(34450816-34450854)
chr4 (192-310)||(42525959-42526079)
chr4 (406-444)||(47157388-47157426)
chr4 (193-239)||(53924814-53924860)
chr4 (196-302)||(1420537-1420645)
chr4 (252-305)||(2016790-2016843)
chr4 (251-304)||(20112410-20112463)
chr4 (256-305)||(37832963-37833012)
chr4 (192-240)||(6207243-6207291)
chr4 (410-442)||(34941507-34941539)
chr4 (192-240)||(54855507-54855555)
chr4 (193-240)||(2016858-2016905)
chr4 (253-304)||(9592393-9592444)
chr4 (251-310)||(12893223-12893282)
chr4 (253-304)||(14449548-14449599)
chr4 (193-228)||(18937319-18937354)
chr4 (250-305)||(24296759-24296814)
chr4 (411-442)||(26354243-26354274)
chr4 (251-310)||(44121048-44121107)
chr4 (189-240)||(53312483-53312533)
chr4 (255-314)||(53925015-53925074)
chr4 (192-226)||(2654035-2654069)
chr4 (251-309)||(4796299-4796357)
chr4 (194-228)||(6614924-6614958)
chr4 (252-306)||(8965773-8965826)
chr4 (250-304)||(10059959-10060013)
chr4 (410-444)||(14527585-14527619)
chr4 (410-444)||(18363662-18363696)
chr4 (257-311)||(21451452-21451506)
chr4 (410-444)||(24666134-24666168)
chr4 (251-305)||(25909486-25909540)
chr4 (410-444)||(36599232-36599266)
chr4 (251-301)||(37831595-37831645)
chr4 (410-444)||(42792780-42792814)
chr4 (192-230)||(43074665-43074703)
chr4 (250-304)||(43074826-43074880)
chr4 (251-301)||(51362539-51362589)
chr4 (252-309)||(2016690-2016747)
chr4 (251-304)||(2653953-2654006)
chr4 (195-240)||(2837102-2837147)
chr4 (195-240)||(10059899-10059944)
chr4 (195-240)||(21871447-21871491)
chr4 (195-240)||(21927308-21927352)
chr4 (257-314)||(23777024-23777081)
chr4 (251-304)||(36945513-36945566)
chr4 (407-444)||(42793538-42793575)
chr4 (414-443)||(51386465-51386494)
chr4 (255-304)||(52463052-52463101)
chr4 (251-307)||(2836896-2836952)
chr4 (250-314)||(3556173-3556237)
chr4 (192-236)||(3658124-3658168)
chr4 (192-228)||(16292467-16292503)
chr4 (404-444)||(20143278-20143318)
chr4 (192-228)||(21597480-21597516)
chr4 (199-239)||(34771338-34771378)
chr4 (252-304)||(36413679-36413731)
chr4 (251-303)||(40489212-40489264)
chr4 (250-306)||(41465409-41465465)
chr4 (250-302)||(45904203-45904255)
chr4 (192-240)||(49185758-49185806)
chr4 (253-305)||(49869252-49869304)
chr4 (193-225)||(50769563-50769595)
chr4 (410-442)||(52129426-52129458)
[»] chr1 (52 HSPs)
chr1 (254-310)||(35544739-35544795)
chr1 (192-239)||(45739135-45739182)
chr1 (251-305)||(3377500-3377554)
chr1 (253-307)||(35580931-35580985)
chr1 (192-240)||(23891726-23891774)
chr1 (192-240)||(46573026-46573074)
chr1 (255-310)||(13344440-13344495)
chr1 (251-310)||(15911963-15912022)
chr1 (255-301)||(12961109-12961155)
chr1 (194-304)||(14978797-14978909)
chr1 (410-444)||(16449560-16449594)
chr1 (410-444)||(16459134-16459168)
chr1 (410-444)||(26240880-26240914)
chr1 (255-305)||(30849494-30849544)
chr1 (252-309)||(7764442-7764499)
chr1 (251-304)||(21932048-21932101)
chr1 (192-240)||(12960912-12960960)
chr1 (192-240)||(17760889-17760937)
chr1 (192-240)||(23220761-23220809)
chr1 (195-298)||(25085595-25085698)
chr1 (192-240)||(39642267-39642315)
chr1 (192-240)||(50226459-50226507)
chr1 (192-239)||(1096648-1096695)
chr1 (193-240)||(15659047-15659094)
chr1 (193-240)||(41997706-41997753)
chr1 (251-310)||(46038894-46038953)
chr1 (250-301)||(46572830-46572881)
chr1 (196-239)||(48319609-48319652)
chr1 (410-444)||(2260858-2260892)
chr1 (410-444)||(14166916-14166950)
chr1 (251-305)||(15911671-15911725)
chr1 (410-444)||(24847788-24847822)
chr1 (410-444)||(24848435-24848469)
chr1 (410-444)||(26240119-26240153)
chr1 (410-444)||(27745561-27745595)
chr1 (199-240)||(27864238-27864280)
chr1 (251-305)||(35580737-35580791)
chr1 (251-301)||(41611244-41611294)
chr1 (251-305)||(51250484-51250538)
chr1 (251-305)||(52201365-52201418)
chr1 (252-305)||(1712369-1712422)
chr1 (406-443)||(2261553-2261590)
chr1 (195-240)||(3377714-3377759)
chr1 (251-304)||(3377772-3377825)
chr1 (253-306)||(26811451-26811504)
chr1 (410-443)||(27746168-27746201)
chr1 (253-306)||(37696541-37696594)
chr1 (253-310)||(50591551-50591608)
chr1 (250-310)||(25085393-25085453)
chr1 (251-307)||(27864418-27864474)
chr1 (251-307)||(41997637-41997693)
chr1 (252-304)||(46039143-46039195)
[»] scaffold0062 (1 HSPs)
scaffold0062 (193-240)||(46143-46190)
[»] scaffold0515 (1 HSPs)
scaffold0515 (251-306)||(3637-3692)
[»] scaffold0306 (1 HSPs)
scaffold0306 (251-306)||(3637-3692)
[»] scaffold0627 (1 HSPs)
scaffold0627 (411-444)||(6470-6503)
[»] scaffold0067 (1 HSPs)
scaffold0067 (199-240)||(4220-4261)
[»] scaffold0809 (1 HSPs)
scaffold0809 (192-240)||(2819-2867)
[»] scaffold0011 (1 HSPs)
scaffold0011 (193-240)||(145555-145602)
[»] scaffold2010 (1 HSPs)
scaffold2010 (251-305)||(492-546)
[»] scaffold0417 (1 HSPs)
scaffold0417 (192-230)||(9535-9573)
[»] scaffold0372 (1 HSPs)
scaffold0372 (257-311)||(117-171)
[»] scaffold0279 (1 HSPs)
scaffold0279 (251-305)||(7175-7229)
[»] scaffold0041 (1 HSPs)
scaffold0041 (195-240)||(94004-94049)
[»] scaffold0854 (1 HSPs)
scaffold0854 (251-303)||(3388-3440)
[»] scaffold0725 (1 HSPs)
scaffold0725 (257-309)||(6698-6750)
[»] scaffold0236 (2 HSPs)
scaffold0236 (251-307)||(22814-22870)
scaffold0236 (250-310)||(23107-23167)
[»] scaffold0019 (1 HSPs)
scaffold0019 (253-305)||(122592-122644)


Alignment Details
Target: chr2 (Bit Score: 319; Significance: 1e-180; HSPs: 54)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 319; E-Value: 1e-180
Query Start/End: Original strand, 76 - 483
Target Start/End: Complemental strand, 44297792 - 44297384
Alignment:
Q  76 catcaaacttcattagaaaataaatgcttatgaccacttgacaatgatgtgccaagtccaaaaaatattacttatacacattttcttcnnnnnnnctcct 175  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||    
T  44297792 catcaaacttcgttagaaaataaatgcttatgaccacttgacaatgatgtgccaagtccaaaaaatattacttatacacattttcttctttttttctcct 44297693  T
Q  176 aactcaatttaatttaggggggccaaaactgctacagttacaaaacttagggggcagttttgtagnnnnnnnnna-ggggccaaaatcgcaacttttgaa 274  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||         | ||||||||||||||||||||||||    
T  44297692 aactcaatttaatttaggggggccaaaactgctacagttacaaaacttagggggcagttttgtagtttttttttagggggccaaaatcgcaacttttgaa 44297593  T
Q  275 aaattaggaggctaaaagtgctattaagcctaaaaattaacctataacctgatatcaatatttcaagtatctttggatggaaattttggagnnnnnnnnn 374  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||             
T  44297592 aaattaggaggctaaaagtgctattaagcctaaaaattaacctataacctgatatcaatatttcaagtatctttggatggaaattttggagaaaaaaaaa 44297493  T
Q  375 nctaagaaataaaattttactacaagttcttgtgaattctagggtgagggttcaattaagtccctcaccgtatgcgttagatcacacatatctttttcct 474  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44297492 actaagaaataaaattttactacaagttcttgtgaattctagggtgagggttcaattaagtccctcaccgtatgcgttagatcacacatatctttttcct 44297393  T
Q  475 caccctcct 483  Q
    |||||||||    
T  44297392 caccctcct 44297384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 193 - 240
Target Start/End: Original strand, 6592934 - 6592981
Alignment:
Q  193 gggggccaaaactgctacagttacaaaacttagggggcagttttgtag 240  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||    
T  6592934 gggggccaaaactgctacagttgcaaaacttagggggcagttttgtag 6592981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 192 - 240
Target Start/End: Original strand, 6510199 - 6510247
Alignment:
Q  192 ggggggccaaaactgctacagttacaaaacttagggggcagttttgtag 240  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||||    
T  6510199 ggggggccaaaactgctacagttgcaaaacttagggggcggttttgtag 6510247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 192 - 306
Target Start/End: Complemental strand, 19206255 - 19206140
Alignment:
Q  192 ggggggccaaaactgctacagttacaaaacttagggggcagttttgtagnnnnnnnnna-ggggccaaaatcgcaacttttgaaaaattaggaggctaaa 290  Q
    |||||||||||||||||||||||  |||||||||||||  |||||||||         | ||||||||||||||||||||   ||||||||| ||| |||    
T  19206255 ggggggccaaaactgctacagttgtaaaacttagggggtggttttgtagtttttttttagggggccaaaatcgcaactttgtgaaaattagggggcgaaa 19206156  T
Q  291 agtgctattaagccta 306  Q
    | ||||||||||||||    
T  19206155 attgctattaagccta 19206140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 192 - 240
Target Start/End: Original strand, 34679292 - 34679340
Alignment:
Q  192 ggggggccaaaactgctacagttacaaaacttagggggcagttttgtag 240  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||||    
T  34679292 ggggggccaaaactgctacagttgcaaaacttagggggcggttttgtag 34679340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 193 - 240
Target Start/End: Complemental strand, 5470441 - 5470394
Alignment:
Q  193 gggggccaaaactgctacagttacaaaacttagggggcagttttgtag 240  Q
    ||||||||||||||||||| || |||||||||||||||||||||||||    
T  5470441 gggggccaaaactgctacaattgcaaaacttagggggcagttttgtag 5470394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 406 - 444
Target Start/End: Complemental strand, 20606968 - 20606930
Alignment:
Q  406 gtgaattctagggtgagggttcaattaagtccctcaccg 444  Q
    |||||||||||||||||||||||||||||||||||||||    
T  20606968 gtgaattctagggtgagggttcaattaagtccctcaccg 20606930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 192 - 240
Target Start/End: Original strand, 15023038 - 15023086
Alignment:
Q  192 ggggggccaaaactgctacagttacaaaacttagggggcagttttgtag 240  Q
    |||||||||||| |||||||||||||||||||||||| | |||||||||    
T  15023038 ggggggccaaaattgctacagttacaaaacttaggggacggttttgtag 15023086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 251 - 307
Target Start/End: Original strand, 25375134 - 25375190
Alignment:
Q  251 ggggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagcctaa 307  Q
    ||||||||||||||||| ||  |||||||||| |||||||| |||||||||||||||    
T  25375134 ggggccaaaatcgcaacattgaaaaaattagggggctaaaactgctattaagcctaa 25375190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 192 - 240
Target Start/End: Original strand, 27489635 - 27489683
Alignment:
Q  192 ggggggccaaaactgctacagttacaaaacttagggggcagttttgtag 240  Q
    |||||| |||||||||||||||| |||||||||||| ||||||||||||    
T  27489635 ggggggtcaaaactgctacagttgcaaaacttagggagcagttttgtag 27489683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 252 - 308
Target Start/End: Complemental strand, 31025927 - 31025871
Alignment:
Q  252 gggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagcctaaa 308  Q
    |||||||||||||||||||||||||  |||| ||| |||||||| ||||||||||||    
T  31025927 gggccaaaatcgcaacttttgaaaagatagggggccaaaagtgcaattaagcctaaa 31025871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 253 - 305
Target Start/End: Complemental strand, 34679148 - 34679096
Alignment:
Q  253 ggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagcct 305  Q
    |||||||||||||||||| ||||| ||||| |||||||| |||||||||||||    
T  34679148 ggccaaaatcgcaactttggaaaagttagggggctaaaactgctattaagcct 34679096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 192 - 240
Target Start/End: Original strand, 39918641 - 39918689
Alignment:
Q  192 ggggggccaaaactgctacagttacaaaacttagggggcagttttgtag 240  Q
    |||||||||||| |||||||||| ||||||||||||||| |||||||||    
T  39918641 ggggggccaaaattgctacagttgcaaaacttagggggcggttttgtag 39918689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 251 - 310
Target Start/End: Original strand, 2755210 - 2755269
Alignment:
Q  251 ggggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagcctaaaaa 310  Q
    ||||||||||||||||||||||||||  |||| ||| |||||||| ||||||||| ||||    
T  2755210 ggggccaaaatcgcaacttttgaaaagatagggggccaaaagtgcaattaagccttaaaa 2755269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 251 - 306
Target Start/End: Complemental strand, 6592777 - 6592722
Alignment:
Q  251 ggggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagccta 306  Q
    |||| ||||||||||||||| ||||| ||||| |||||||| ||||||||||||||    
T  6592777 ggggtcaaaatcgcaactttggaaaagttagggggctaaaactgctattaagccta 6592722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 193 - 239
Target Start/End: Original strand, 32969725 - 32969771
Alignment:
Q  193 gggggccaaaactgctacagttacaaaacttagggggcagttttgta 239  Q
    |||||||||||||||||| ||| ||||||||||||||| ||||||||    
T  32969725 gggggccaaaactgctactgttgcaaaacttagggggcggttttgta 32969771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 194 - 240
Target Start/End: Original strand, 35718857 - 35718903
Alignment:
Q  194 ggggccaaaactgctacagttacaaaacttagggggcagttttgtag 240  Q
    ||||||||||||||||||||| ||||||||||||| | |||||||||    
T  35718857 ggggccaaaactgctacagttgcaaaacttaggggacggttttgtag 35718903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 251 - 305
Target Start/End: Complemental strand, 43028847 - 43028793
Alignment:
Q  251 ggggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagcct 305  Q
    |||||||||||||||||||| || || ||||| |||||||| |||||||||||||    
T  43028847 ggggccaaaatcgcaactttggagaagttagggggctaaaactgctattaagcct 43028793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 251 - 292
Target Start/End: Complemental strand, 16238165 - 16238124
Alignment:
Q  251 ggggccaaaatcgcaacttttgaaaaattaggaggctaaaag 292  Q
    ||||||||||||||||||||||||||| |||||||| |||||    
T  16238165 ggggccaaaatcgcaacttttgaaaaaataggaggccaaaag 16238124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 256 - 305
Target Start/End: Original strand, 37343948 - 37343997
Alignment:
Q  256 caaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagcct 305  Q
    |||||||||||||||||||||  |||||||| |||||||| |||||||||    
T  37343948 caaaatcgcaacttttgaaaagataggaggccaaaagtgcaattaagcct 37343997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 250 - 307
Target Start/End: Complemental strand, 41454566 - 41454509
Alignment:
Q  250 aggggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagcctaa 307  Q
    ||||| |||||||||||||||||||||  |||| ||| |||||||| |||||||||||    
T  41454566 agggggcaaaatcgcaacttttgaaaagatagggggccaaaagtgcaattaagcctaa 41454509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 197 - 237
Target Start/End: Complemental strand, 24472556 - 24472516
Alignment:
Q  197 gccaaaactgctacagttacaaaacttagggggcagttttg 237  Q
    |||||||||||||||||||||||||||||||| || |||||    
T  24472556 gccaaaactgctacagttacaaaacttaggggacatttttg 24472516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 193 - 229
Target Start/End: Original strand, 31827733 - 31827769
Alignment:
Q  193 gggggccaaaactgctacagttacaaaacttaggggg 229  Q
    |||||||||||||||||||||| ||||||||||||||    
T  31827733 gggggccaaaactgctacagttgcaaaacttaggggg 31827769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 192 - 240
Target Start/End: Original strand, 37431737 - 37431785
Alignment:
Q  192 ggggggccaaaactgctacagttacaaaacttagggggcagttttgtag 240  Q
    |||||||||||| |||||||||| ||||||||| ||||| |||||||||    
T  37431737 ggggggccaaaaatgctacagttgcaaaacttaaggggcggttttgtag 37431785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 406 - 442
Target Start/End: Original strand, 44296861 - 44296897
Alignment:
Q  406 gtgaattctagggtgagggttcaattaagtccctcac 442  Q
    |||||||||||||||||||| ||||||||||||||||    
T  44296861 gtgaattctagggtgagggtccaattaagtccctcac 44296897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 251 - 306
Target Start/End: Original strand, 5470596 - 5470651
Alignment:
Q  251 ggggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagccta 306  Q
    |||||||||||||||||||| | ||| ||||| |||||||| |||||| |||||||    
T  5470596 ggggccaaaatcgcaactttaggaaagttagggggctaaaactgctataaagccta 5470651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 251 - 310
Target Start/End: Original strand, 10741338 - 10741397
Alignment:
Q  251 ggggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagcctaaaaa 310  Q
    |||| ||||| |||||||||||||||  |||| ||| |||||||| ||||||||||||||    
T  10741338 ggggtcaaaaccgcaacttttgaaaagatagggggccaaaagtgcaattaagcctaaaaa 10741397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 251 - 306
Target Start/End: Original strand, 12542417 - 12542472
Alignment:
Q  251 ggggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagccta 306  Q
    ||||||||||||||||||||||||||  |||  ||| |||||||| ||||||||||    
T  12542417 ggggccaaaatcgcaacttttgaaaagatagagggccaaaagtgcaattaagccta 12542472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 250 - 305
Target Start/End: Complemental strand, 14489268 - 14489213
Alignment:
Q  250 aggggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagcct 305  Q
    ||||||||||||| ||||||||| ||| ||||  |||||||| |||||||||||||    
T  14489268 aggggccaaaatcacaacttttggaaagttagagggctaaaactgctattaagcct 14489213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 193 - 240
Target Start/End: Complemental strand, 36195703 - 36195657
Alignment:
Q  193 gggggccaaaactgctacagttacaaaacttagggggcagttttgtag 240  Q
    |||||||||||||||||||||| | ||||||||||||| |||||||||    
T  36195703 gggggccaaaactgctacagttgc-aaacttagggggcggttttgtag 36195657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 250 - 305
Target Start/End: Original strand, 41454801 - 41454856
Alignment:
Q  250 aggggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagcct 305  Q
    |||||||||||||||||||||||||||  |||| ||| ||| |||| |||||||||    
T  41454801 aggggccaaaatcgcaacttttgaaaagatagggggccaaacgtgcaattaagcct 41454856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 406 - 441
Target Start/End: Original strand, 44986813 - 44986848
Alignment:
Q  406 gtgaattctagggtgagggttcaattaagtccctca 441  Q
    ||||||||||||||||||| ||||||||||||||||    
T  44986813 gtgaattctagggtgagggatcaattaagtccctca 44986848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 410 - 444
Target Start/End: Complemental strand, 127778 - 127744
Alignment:
Q  410 attctagggtgagggttcaattaagtccctcaccg 444  Q
    |||||||||||||||||||||||||||| ||||||    
T  127778 attctagggtgagggttcaattaagtccttcaccg 127744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 194 - 228
Target Start/End: Original strand, 4925648 - 4925682
Alignment:
Q  194 ggggccaaaactgctacagttacaaaacttagggg 228  Q
    ||||||||||||||||||||| |||||||||||||    
T  4925648 ggggccaaaactgctacagttgcaaaacttagggg 4925682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 193 - 309
Target Start/End: Original strand, 14489412 - 14489529
Alignment:
Q  193 gggggccaaaactgctacagttacaaaacttagggggcagttttgtag-nnnnnnnnnaggggccaaaatcgcaacttttgaaaaattaggaggctaaaa 291  Q
    ||||||||||||||| |||||| ||||||||||||||   ||||||||          ||||||||||||||||||||    ||| ||||| ||| ||||    
T  14489412 gggggccaaaactgccacagttgcaaaacttagggggtgattttgtagtttttttcttaggggccaaaatcgcaacttcgtgaaagttagggggcgaaaa 14489511  T
Q  292 gtgctattaagcctaaaa 309  Q
     |||||||||||||||||    
T  14489512 ctgctattaagcctaaaa 14489529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 254 - 304
Target Start/End: Complemental strand, 15022888 - 15022838
Alignment:
Q  254 gccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagcc 304  Q
    ||||||||| ||||||| ||||| ||||| |||||||| ||||||||||||    
T  15022888 gccaaaatcacaactttcgaaaagttagggggctaaaactgctattaagcc 15022838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 251 - 309
Target Start/End: Complemental strand, 19885911 - 19885854
Alignment:
Q  251 ggggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagcctaaaa 309  Q
    ||||||||||||||||||||||||||  |||| ||| |||||||| |||||| ||||||    
T  19885911 ggggccaaaatcgcaacttttgaaaagatagg-ggccaaaagtgcaattaagtctaaaa 19885854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 251 - 305
Target Start/End: Complemental strand, 32661457 - 32661403
Alignment:
Q  251 ggggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagcct 305  Q
    |||| |||||||||||||||||||||  |||| ||| |||||||| |||||||||    
T  32661457 ggggacaaaatcgcaacttttgaaaagatagggggccaaaagtgcaattaagcct 32661403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 194 - 240
Target Start/End: Original strand, 34761061 - 34761107
Alignment:
Q  194 ggggccaaaactgctacagttacaaaacttagggggcagttttgtag 240  Q
    |||||||||||||||||| || ||||||||||| ||| |||||||||    
T  34761061 ggggccaaaactgctacaattgcaaaacttaggtggcggttttgtag 34761107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 251 - 305
Target Start/End: Complemental strand, 36286176 - 36286122
Alignment:
Q  251 ggggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagcct 305  Q
    ||||||||||||||||||||||||||  |||  ||| |||||||| |||||||||    
T  36286176 ggggccaaaatcgcaacttttgaaaatatagagggccaaaagtgcaattaagcct 36286122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 251 - 305
Target Start/End: Original strand, 36286414 - 36286468
Alignment:
Q  251 ggggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagcct 305  Q
    |||||||||||||||||||||| |||  |||| ||| |||||||| |||||||||    
T  36286414 ggggccaaaatcgcaacttttggaaagatagggggccaaaagtgcaattaagcct 36286468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 194 - 240
Target Start/End: Original strand, 43028995 - 43029041
Alignment:
Q  194 ggggccaaaactgctacagttacaaaacttagggggcagttttgtag 240  Q
    |||||||||||||||||| ||  |||||||||||||| |||||||||    
T  43028995 ggggccaaaactgctacaattgtaaaacttagggggcggttttgtag 43029041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 251 - 304
Target Start/End: Complemental strand, 10857392 - 10857339
Alignment:
Q  251 ggggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagcc 304  Q
    |||||||||||||||||||||| |||  |||| ||| |||||||| ||||||||    
T  10857392 ggggccaaaatcgcaacttttggaaagatagggggccaaaagtgcaattaagcc 10857339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 406 - 439
Target Start/End: Original strand, 20354507 - 20354540
Alignment:
Q  406 gtgaattctagggtgagggttcaattaagtccct 439  Q
    |||||||||||||| |||||||||||||||||||    
T  20354507 gtgaattctagggtaagggttcaattaagtccct 20354540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 255 - 308
Target Start/End: Original strand, 21024725 - 21024778
Alignment:
Q  255 ccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagcctaaa 308  Q
    ||||||||||||||||||||||  |||| ||  |||||||| ||||||||||||    
T  21024725 ccaaaatcgcaacttttgaaaagatagggggtcaaaagtgcaattaagcctaaa 21024778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 251 - 304
Target Start/End: Original strand, 32661695 - 32661748
Alignment:
Q  251 ggggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagcc 304  Q
    |||||||||||||||||||||| |||  |||| ||| |||||||| ||||||||    
T  32661695 ggggccaaaatcgcaacttttggaaagatagggggccaaaagtgcaattaagcc 32661748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 251 - 304
Target Start/End: Complemental strand, 34470082 - 34470029
Alignment:
Q  251 ggggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagcc 304  Q
    ||||||||| ||||||||||||||||  |||| ||| |||||||| ||||||||    
T  34470082 ggggccaaagtcgcaacttttgaaaagatagggggccaaaagtgcaattaagcc 34470029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 251 - 304
Target Start/End: Original strand, 37552003 - 37552056
Alignment:
Q  251 ggggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagcc 304  Q
    |||| |||||||||||||||||||||  || ||||| |||||||| ||||||||    
T  37552003 ggggacaaaatcgcaacttttgaaaagatatgaggccaaaagtgcaattaagcc 37552056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 196 - 240
Target Start/End: Original strand, 8857250 - 8857294
Alignment:
Q  196 ggccaaaactgctacagttacaaaacttagggggcagttttgtag 240  Q
    |||||||||||||| |||| ||||||||| |||||| ||||||||    
T  8857250 ggccaaaactgctatagttgcaaaacttatggggcaattttgtag 8857294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 255 - 303
Target Start/End: Complemental strand, 19399231 - 19399183
Alignment:
Q  255 ccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagc 303  Q
    ||||||||||||||||   ||| |||||||||||||| |||||||||||    
T  19399231 ccaaaatcgcaactttgagaaagttaggaggctaaaattgctattaagc 19399183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 253 - 305
Target Start/End: Original strand, 19889480 - 19889532
Alignment:
Q  253 ggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagcct 305  Q
    ||||||||||||||||||||||||  || | ||| |||||||| |||||||||    
T  19889480 ggccaaaatcgcaacttttgaaaagatatggggccaaaagtgcaattaagcct 19889532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 250 - 306
Target Start/End: Original strand, 24472704 - 24472760
Alignment:
Q  250 aggggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagccta 306  Q
    |||||| |||||| ||||||| |||||||||||   |||||| ||||||||||||||    
T  24472704 aggggctaaaatcacaactttggaaaaattagggttctaaaactgctattaagccta 24472760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 254 - 306
Target Start/End: Complemental strand, 34600597 - 34600545
Alignment:
Q  254 gccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagccta 306  Q
    ||||||||||||||||||| |||  |||| ||| |||||||| ||||||||||    
T  34600597 gccaaaatcgcaacttttggaaagatagggggccaaaagtgcaattaagccta 34600545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 254 - 306
Target Start/End: Complemental strand, 44245000 - 44244948
Alignment:
Q  254 gccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagccta 306  Q
    ||||||||||||||||||| |||  |||||| | |||||||| ||||||||||    
T  44245000 gccaaaatcgcaacttttggaaagataggagaccaaaagtgcaattaagccta 44244948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 44; Significance: 8e-16; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 251 - 310
Target Start/End: Complemental strand, 24119545 - 24119486
Alignment:
Q  251 ggggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagcctaaaaa 310  Q
    ||||||||||||||||||||||||||| |||||||| |||||||| |||||||| |||||    
T  24119545 ggggccaaaatcgcaacttttgaaaaaataggaggccaaaagtgcaattaagccaaaaaa 24119486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 192 - 240
Target Start/End: Complemental strand, 10727305 - 10727257
Alignment:
Q  192 ggggggccaaaactgctacagttacaaaacttagggggcagttttgtag 240  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||||||    
T  10727305 ggggggccaaaactgctacagttgcaaaacttagagggcagttttgtag 10727257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 192 - 240
Target Start/End: Original strand, 33401254 - 33401302
Alignment:
Q  192 ggggggccaaaactgctacagttacaaaacttagggggcagttttgtag 240  Q
    ||||||||||||||||||||||| ||||||||||||| |||||||||||    
T  33401254 ggggggccaaaactgctacagttgcaaaacttaggggacagttttgtag 33401302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 193 - 236
Target Start/End: Original strand, 2203352 - 2203395
Alignment:
Q  193 gggggccaaaactgctacagttacaaaacttagggggcagtttt 236  Q
    ||||||||||||| |||||||| |||||||||||||||||||||    
T  2203352 gggggccaaaactactacagttgcaaaacttagggggcagtttt 2203395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 193 - 240
Target Start/End: Complemental strand, 3579708 - 3579661
Alignment:
Q  193 gggggccaaaactgctacagttacaaaacttagggggcagttttgtag 240  Q
    ||||||||||| |||||||||| ||||||||||||||| |||||||||    
T  3579708 gggggccaaaagtgctacagttgcaaaacttagggggcggttttgtag 3579661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 251 - 310
Target Start/End: Original strand, 10727455 - 10727514
Alignment:
Q  251 ggggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagcctaaaaa 310  Q
    |||||||||||| ||||||| ||||| ||||| |||||||| |||||||| |||||||||    
T  10727455 ggggccaaaatcacaactttggaaaagttagggggctaaaactgctattatgcctaaaaa 10727514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 255 - 306
Target Start/End: Original strand, 12730600 - 12730651
Alignment:
Q  255 ccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagccta 306  Q
    ||||||||||||||||||||||  |||||||| |||||||| ||||||||||    
T  12730600 ccaaaatcgcaacttttgaaaagataggaggccaaaagtgcaattaagccta 12730651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 193 - 240
Target Start/End: Original strand, 12766415 - 12766462
Alignment:
Q  193 gggggccaaaactgctacagttacaaaacttagggggcagttttgtag 240  Q
    |||||||||||||||||||||| ||||||||| ||||| |||||||||    
T  12766415 gggggccaaaactgctacagttgcaaaacttaaggggcggttttgtag 12766462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 251 - 305
Target Start/End: Complemental strand, 4037091 - 4037037
Alignment:
Q  251 ggggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagcct 305  Q
    ||||||||||||||||||||||||||  |||| ||| |||||||| |||||||||    
T  4037091 ggggccaaaatcgcaacttttgaaaagatagggggccaaaagtgcaattaagcct 4037037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 251 - 305
Target Start/End: Original strand, 11307336 - 11307390
Alignment:
Q  251 ggggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagcct 305  Q
    ||||| ||||||||||||||||||||  |||||||| |||||||| |||||||||    
T  11307336 ggggctaaaatcgcaacttttgaaaagataggaggccaaaagtgcaattaagcct 11307390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 194 - 240
Target Start/End: Original strand, 28011327 - 28011373
Alignment:
Q  194 ggggccaaaactgctacagttacaaaacttagggggcagttttgtag 240  Q
    ||||||||||||||||||||| ||||||||| ||||| |||||||||    
T  28011327 ggggccaaaactgctacagttgcaaaacttaaggggcggttttgtag 28011373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 252 - 306
Target Start/End: Complemental strand, 33399837 - 33399784
Alignment:
Q  252 gggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagccta 306  Q
    ||||||||||||||||||| ||||| ||||| |||||||| ||||||||||||||    
T  33399837 gggccaaaatcgcaactttggaaaagttagg-ggctaaaactgctattaagccta 33399784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 253 - 310
Target Start/End: Complemental strand, 2203238 - 2203181
Alignment:
Q  253 ggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagcctaaaaa 310  Q
    |||||||||||||||||| | ||| |||||  ||||||| ||||||||||||||||||    
T  2203238 ggccaaaatcgcaactttgggaaagttagggagctaaaattgctattaagcctaaaaa 2203181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 256 - 309
Target Start/End: Complemental strand, 17248684 - 17248631
Alignment:
Q  256 caaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagcctaaaa 309  Q
    |||||||||||||||  |||| |||||||||||||| |||||||||||| ||||    
T  17248684 caaaatcgcaactttaaaaaagttaggaggctaaaactgctattaagccaaaaa 17248631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 192 - 240
Target Start/End: Original strand, 1377407 - 1377455
Alignment:
Q  192 ggggggccaaaactgctacagttacaaaacttagggggcagttttgtag 240  Q
    ||||||||||||||| ||||||| ||||||||||||  |||||||||||    
T  1377407 ggggggccaaaactgttacagttgcaaaacttagggaacagttttgtag 1377455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 192 - 240
Target Start/End: Original strand, 1385155 - 1385203
Alignment:
Q  192 ggggggccaaaactgctacagttacaaaacttagggggcagttttgtag 240  Q
    ||||||||||||||| ||||||| ||||||||||||  |||||||||||    
T  1385155 ggggggccaaaactgttacagttgcaaaacttagggaacagttttgtag 1385203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 256 - 304
Target Start/End: Complemental strand, 24418534 - 24418486
Alignment:
Q  256 caaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagcc 304  Q
    |||||||||||||||||||||  |||||||| |||||||| ||||||||    
T  24418534 caaaatcgcaacttttgaaaagataggaggccaaaagtgcaattaagcc 24418486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 192 - 240
Target Start/End: Original strand, 32143450 - 32143498
Alignment:
Q  192 ggggggccaaaactgctacagttacaaaacttagggggcagttttgtag 240  Q
    ||||||||| ||||||||||||| |||||||||| ||||| ||||||||    
T  32143450 ggggggccagaactgctacagttgcaaaacttagagggcaattttgtag 32143498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 193 - 240
Target Start/End: Complemental strand, 266235 - 266188
Alignment:
Q  193 gggggccaaaactgctacagttacaaaacttagggggcagttttgtag 240  Q
    ||||| |||||||||||||||| ||||||||| |||||| ||||||||    
T  266235 gggggtcaaaactgctacagttgcaaaacttaaggggcaattttgtag 266188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 192 - 239
Target Start/End: Complemental strand, 2840904 - 2840857
Alignment:
Q  192 ggggggccaaaactgctacagttacaaaacttagggggcagttttgta 239  Q
    |||||||||||||||||||| || ||||||||||||| | ||||||||    
T  2840904 ggggggccaaaactgctacaattgcaaaacttaggggacggttttgta 2840857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 193 - 240
Target Start/End: Complemental strand, 2853541 - 2853494
Alignment:
Q  193 gggggccaaaactgctacagttacaaaacttagggggcagttttgtag 240  Q
    |||| ||||||||||||||||| ||||||||||||| | |||||||||    
T  2853541 ggggaccaaaactgctacagttgcaaaacttaggggacggttttgtag 2853494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 193 - 240
Target Start/End: Original strand, 10727394 - 10727441
Alignment:
Q  193 gggggccaaaactgctacagttacaaaacttagggggcagttttgtag 240  Q
    ||||||||||||||| |||| | ||||||||||||||| |||||||||    
T  10727394 gggggccaaaactgccacagatgcaaaacttagggggcggttttgtag 10727441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 250 - 309
Target Start/End: Complemental strand, 23349815 - 23349756
Alignment:
Q  250 aggggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagcctaaaa 309  Q
    ||||| ||||||||||||||||| |||  ||||| || |||||||| |||||||||||||    
T  23349815 aggggtcaaaatcgcaacttttggaaagataggaagccaaaagtgcaattaagcctaaaa 23349756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 252 - 303
Target Start/End: Original strand, 31175827 - 31175878
Alignment:
Q  252 gggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagc 303  Q
    |||||||||||||||||||||||||  |||| || ||||||||| |||||||    
T  31175827 gggccaaaatcgcaacttttgaaaagatagggggttaaaagtgcaattaagc 31175878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 406 - 444
Target Start/End: Original strand, 2138478 - 2138516
Alignment:
Q  406 gtgaattctagggtgagggttcaattaagtccctcaccg 444  Q
    |||||||||||||||||||| |||||| |||||||||||    
T  2138478 gtgaattctagggtgagggtccaattaggtccctcaccg 2138516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 253 - 303
Target Start/End: Original strand, 6036922 - 6036971
Alignment:
Q  253 ggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagc 303  Q
    |||||||||||||||||| ||||| ||||| |||||||| |||||||||||    
T  6036922 ggccaaaatcgcaactttagaaaagttagg-ggctaaaactgctattaagc 6036971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 406 - 444
Target Start/End: Complemental strand, 13084926 - 13084888
Alignment:
Q  406 gtgaattctagggtgagggttcaattaagtccctcaccg 444  Q
    |||||||||||||||||||||||| |||||| |||||||    
T  13084926 gtgaattctagggtgagggttcaactaagtctctcaccg 13084888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 406 - 443
Target Start/End: Original strand, 5312242 - 5312279
Alignment:
Q  406 gtgaattctagggtgagggttcaattaagtccctcacc 443  Q
    ||||||||||  ||||||||||||||||||||||||||    
T  5312242 gtgaattctacagtgagggttcaattaagtccctcacc 5312279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 251 - 307
Target Start/End: Original strand, 2853677 - 2853733
Alignment:
Q  251 ggggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagcctaa 307  Q
    ||||||||||| ||||||||   ||| |||||||| ||||| |||||||||||||||    
T  2853677 ggggccaaaattgcaactttgagaaagttaggaggttaaaactgctattaagcctaa 2853733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 195 - 235
Target Start/End: Complemental strand, 23585106 - 23585066
Alignment:
Q  195 gggccaaaactgctacagttacaaaacttagggggcagttt 235  Q
    ||||||||||||||| ||||  |||||||||||||||||||    
T  23585106 gggccaaaactgctatagttgaaaaacttagggggcagttt 23585066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 251 - 303
Target Start/End: Complemental strand, 32591649 - 32591597
Alignment:
Q  251 ggggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagc 303  Q
    ||||||||||||||||||||||||||  ||||  || |||||||| |||||||    
T  32591649 ggggccaaaatcgcaacttttgaaaagatagggtgccaaaagtgcaattaagc 32591597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 44; Significance: 8e-16; HSPs: 46)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 192 - 239
Target Start/End: Complemental strand, 30603727 - 30603680
Alignment:
Q  192 ggggggccaaaactgctacagttacaaaacttagggggcagttttgta 239  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  30603727 ggggggccaaaactgctacagttgcaaaacttagggggcagttttgta 30603680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 192 - 307
Target Start/End: Complemental strand, 12406155 - 12406038
Alignment:
Q  192 ggggggccaaaactgctacagttacaaaacttagggggcagttttgtagnnnnnnnnna---ggggccaaaatcgcaacttttgaaaaattaggaggcta 288  Q
    ||||||||||||||| ||||||| ||||||||||||||| |||||||||             |||||||||||||||||||| | ||| ||||| |||||    
T  12406155 ggggggccaaaactg-tacagttgcaaaacttagggggcggttttgtagttttctttcttagggggccaaaatcgcaactttgggaaagttagggggcta 12406057  T
Q  289 aaagtgctattaagcctaa 307  Q
    ||| |||||||||||||||    
T  12406056 aaactgctattaagcctaa 12406038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 192 - 237
Target Start/End: Original strand, 36798375 - 36798420
Alignment:
Q  192 ggggggccaaaactgctacagttacaaaacttagggggcagttttg 237  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||||    
T  36798375 ggggggccaaaactgctacagttgcaaaacttagggggcggttttg 36798420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 192 - 239
Target Start/End: Complemental strand, 19340875 - 19340828
Alignment:
Q  192 ggggggccaaaactgctacagttacaaaacttagggggcagttttgta 239  Q
    ||||||||||||||||||||||| |||||||||||||||  |||||||    
T  19340875 ggggggccaaaactgctacagttgcaaaacttagggggcgattttgta 19340828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 251 - 314
Target Start/End: Complemental strand, 21066428 - 21066365
Alignment:
Q  251 ggggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagcctaaaaattaa 314  Q
    ||||||||||||| |||||| ||||| ||||| |||||||| || ||||||||| |||||||||    
T  21066428 ggggccaaaatcgaaactttggaaaagttagggggctaaaattgttattaagccaaaaaattaa 21066365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 193 - 240
Target Start/End: Original strand, 28446204 - 28446251
Alignment:
Q  193 gggggccaaaactgctacagttacaaaacttagggggcagttttgtag 240  Q
    |||||||||||||||||||||| ||||||||||||| | |||||||||    
T  28446204 gggggccaaaactgctacagttgcaaaacttaggggacggttttgtag 28446251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 251 - 301
Target Start/End: Original strand, 8006273 - 8006323
Alignment:
Q  251 ggggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaa 301  Q
    ||||||||||||||||||||||||||  |||||||| |||||||| |||||    
T  8006273 ggggccaaaatcgcaacttttgaaaagataggaggccaaaagtgcaattaa 8006323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 410 - 444
Target Start/End: Complemental strand, 27345962 - 27345928
Alignment:
Q  410 attctagggtgagggttcaattaagtccctcaccg 444  Q
    |||||||||||||||||||||||||||||||||||    
T  27345962 attctagggtgagggttcaattaagtccctcaccg 27345928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 406 - 444
Target Start/End: Original strand, 39466886 - 39466924
Alignment:
Q  406 gtgaattctagggtgagggttcaattaagtccctcaccg 444  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  39466886 gtgaattctagggtgagggtccaattaagtccctcaccg 39466924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 251 - 304
Target Start/End: Original strand, 3333962 - 3334015
Alignment:
Q  251 ggggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagcc 304  Q
    |||||||||||||||||||| ||||| ||||| |||||||| | ||||||||||    
T  3333962 ggggccaaaatcgcaactttggaaaagttagggggctaaaactactattaagcc 3334015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 251 - 308
Target Start/End: Original strand, 27904744 - 27904801
Alignment:
Q  251 ggggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagcctaaa 308  Q
    ||||||||||||||||||||  |||| ||||  |||||||| ||||||||||||||||    
T  27904744 ggggccaaaatcgcaactttgaaaaagttagagggctaaaactgctattaagcctaaa 27904801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 192 - 229
Target Start/End: Complemental strand, 32391833 - 32391796
Alignment:
Q  192 ggggggccaaaactgctacagttacaaaacttaggggg 229  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  32391833 ggggggccaaaactgctacagttgcaaaacttaggggg 32391796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 192 - 228
Target Start/End: Complemental strand, 6130369 - 6130333
Alignment:
Q  192 ggggggccaaaactgctacagttacaaaacttagggg 228  Q
    ||||||||||||||||||||||| |||||||||||||    
T  6130369 ggggggccaaaactgctacagttgcaaaacttagggg 6130333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 251 - 307
Target Start/End: Complemental strand, 10332009 - 10331953
Alignment:
Q  251 ggggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagcctaa 307  Q
    ||||||||||||||||||||||||||  |||| ||  |||||||| |||||||||||    
T  10332009 ggggccaaaatcgcaacttttgaaaagatagggggtcaaaagtgcaattaagcctaa 10331953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 192 - 240
Target Start/End: Original strand, 24405696 - 24405744
Alignment:
Q  192 ggggggccaaaactgctacagttacaaaacttagggggcagttttgtag 240  Q
    ||||||| |||||| |||||||| |||||||||| ||||||||||||||    
T  24405696 ggggggctaaaactcctacagttgcaaaacttagtgggcagttttgtag 24405744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 192 - 228
Target Start/End: Complemental strand, 40276133 - 40276097
Alignment:
Q  192 ggggggccaaaactgctacagttacaaaacttagggg 228  Q
    ||||||||||||||||||||||| |||||||||||||    
T  40276133 ggggggccaaaactgctacagttgcaaaacttagggg 40276097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 193 - 240
Target Start/End: Original strand, 2974833 - 2974880
Alignment:
Q  193 gggggccaaaactgctacagttacaaaacttagggggcagttttgtag 240  Q
    |||||||||||||||||||| | ||||||||||||||| ||| |||||    
T  2974833 gggggccaaaactgctacaggtgcaaaacttagggggcggttctgtag 2974880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 193 - 240
Target Start/End: Original strand, 9852985 - 9853032
Alignment:
Q  193 gggggccaaaactgctacagttacaaaacttagggggcagttttgtag 240  Q
    |||||||||||||| ||||||| ||||||||||||||| |||| ||||    
T  9852985 gggggccaaaactgatacagttgcaaaacttagggggcggtttagtag 9853032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 250 - 305
Target Start/End: Original strand, 12406300 - 12406355
Alignment:
Q  250 aggggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagcct 305  Q
    ||||||||||||| |||||||  |||| ||||| |||||||| |||||||||||||    
T  12406300 aggggccaaaatctcaactttgaaaaagttagggggctaaaattgctattaagcct 12406355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 193 - 240
Target Start/End: Original strand, 16132929 - 16132976
Alignment:
Q  193 gggggccaaaactgctacagttacaaaacttagggggcagttttgtag 240  Q
    |||||||||||||||||||||  ||||| |||||||||| ||||||||    
T  16132929 gggggccaaaactgctacagtggcaaaatttagggggcaattttgtag 16132976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 192 - 239
Target Start/End: Original strand, 21066539 - 21066586
Alignment:
Q  192 ggggggccaaaactgctacagttacaaaacttagggggcagttttgta 239  Q
    ||||||||||||||||||||||| ||||||||| || || ||||||||    
T  21066539 ggggggccaaaactgctacagttgcaaaacttaaggagcggttttgta 21066586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 251 - 302
Target Start/End: Original strand, 37897978 - 37898029
Alignment:
Q  251 ggggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaag 302  Q
    ||||||||||||||||||||  |||| ||||| |||||||| ||||||||||    
T  37897978 ggggccaaaatcgcaactttgaaaaagttagggggctaaaactgctattaag 37898029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 406 - 441
Target Start/End: Complemental strand, 39467686 - 39467651
Alignment:
Q  406 gtgaattctagggtgagggttcaattaagtccctca 441  Q
    ||||||||||||||||||||| ||||||||||||||    
T  39467686 gtgaattctagggtgagggtttaattaagtccctca 39467651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 250 - 301
Target Start/End: Original strand, 40133139 - 40133190
Alignment:
Q  250 aggggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaa 301  Q
    ||||||||||||||||||||| | ||| ||||| |||||||| |||||||||    
T  40133139 aggggccaaaatcgcaactttgggaaagttagggggctaaaattgctattaa 40133190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 410 - 444
Target Start/End: Complemental strand, 2029090 - 2029056
Alignment:
Q  410 attctagggtgagggttcaattaagtccctcaccg 444  Q
    ||||||||||||||| |||||||||||||||||||    
T  2029090 attctagggtgagggctcaattaagtccctcaccg 2029056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 250 - 304
Target Start/End: Original strand, 6131795 - 6131849
Alignment:
Q  250 aggggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagcc 304  Q
    ||||||||||||||||||||| | ||| |||||  ||||||| ||||||||||||    
T  6131795 aggggccaaaatcgcaactttaggaaagttaggtagctaaaactgctattaagcc 6131849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 250 - 308
Target Start/End: Original strand, 17235264 - 17235322
Alignment:
Q  250 aggggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagcctaaa 308  Q
    |||||||||||| ||||||||||||||  |||| | | |||||||| ||||||||||||    
T  17235264 aggggccaaaattgcaacttttgaaaagataggggaccaaaagtgcaattaagcctaaa 17235322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 410 - 444
Target Start/End: Complemental strand, 23253529 - 23253495
Alignment:
Q  410 attctagggtgagggttcaattaagtccctcaccg 444  Q
    |||||||||||||||| ||||||||||||||||||    
T  23253529 attctagggtgagggtccaattaagtccctcaccg 23253495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 410 - 444
Target Start/End: Original strand, 24565578 - 24565612
Alignment:
Q  410 attctagggtgagggttcaattaagtccctcaccg 444  Q
    |||||||||||||||||||||||| ||||||||||    
T  24565578 attctagggtgagggttcaattaaatccctcaccg 24565612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 410 - 444
Target Start/End: Original strand, 24606614 - 24606648
Alignment:
Q  410 attctagggtgagggttcaattaagtccctcaccg 444  Q
    |||||||||||||||||||||||| ||||||||||    
T  24606614 attctagggtgagggttcaattaaatccctcaccg 24606648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 252 - 306
Target Start/End: Complemental strand, 37887724 - 37887670
Alignment:
Q  252 gggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagccta 306  Q
    |||||||||||||||||||||||||  |||| ||  |||||||| ||||||||||    
T  37887724 gggccaaaatcgcaacttttgaaaagatagggggtcaaaagtgcaattaagccta 37887670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 193 - 239
Target Start/End: Complemental strand, 37897831 - 37897785
Alignment:
Q  193 gggggccaaaactgctacagttacaaaacttagggggcagttttgta 239  Q
    |||||||||||| |||||| || ||||||||||||||| ||||||||    
T  37897831 gggggccaaaacagctacaattgcaaaacttagggggcggttttgta 37897785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 410 - 444
Target Start/End: Complemental strand, 39937949 - 39937915
Alignment:
Q  410 attctagggtgagggttcaattaagtccctcaccg 444  Q
    ||||||||||||||||||| |||||||||||||||    
T  39937949 attctagggtgagggttcagttaagtccctcaccg 39937915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 410 - 444
Target Start/End: Complemental strand, 40372203 - 40372169
Alignment:
Q  410 attctagggtgagggttcaattaagtccctcaccg 444  Q
    |||||||||||||||||||||||||| ||||||||    
T  40372203 attctagggtgagggttcaattaagttcctcaccg 40372169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 193 - 238
Target Start/End: Complemental strand, 2974747 - 2974702
Alignment:
Q  193 gggggccaaaactgctacagttacaaaacttagggggcagttttgt 238  Q
    ||||||||||||||| |||| | ||||||||||||||| |||||||    
T  2974747 gggggccaaaactgccacagatgcaaaacttagggggcggttttgt 2974702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 253 - 314
Target Start/End: Complemental strand, 8284206 - 8284145
Alignment:
Q  253 ggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagcctaaaaattaa 314  Q
    |||||||||||||||||| ||||| ||| | || ||||| |||||||||  |||||||||||    
T  8284206 ggccaaaatcgcaactttggaaaagttatggggttaaaattgctattaaatctaaaaattaa 8284145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 302
Target Start/End: Original strand, 20630004 - 20630057
Alignment:
Q  250 aggggccaaaatcgcaacttttgaaaaatta-ggaggctaaaagtgctattaag 302  Q
    ||||||||||||| ||||||| ||||| ||| ||||||||||| ||||||||||    
T  20630004 aggggccaaaatcacaactttggaaaagttagggaggctaaaactgctattaag 20630057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 195 - 228
Target Start/End: Original strand, 22300814 - 22300847
Alignment:
Q  195 gggccaaaactgctacagttacaaaacttagggg 228  Q
    |||||||||||||||||||| |||||||||||||    
T  22300814 gggccaaaactgctacagttgcaaaacttagggg 22300847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 410 - 443
Target Start/End: Complemental strand, 29595637 - 29595604
Alignment:
Q  410 attctagggtgagggttcaattaagtccctcacc 443  Q
    ||||||| ||||||||||||||||||||||||||    
T  29595637 attctagcgtgagggttcaattaagtccctcacc 29595604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 199 - 240
Target Start/End: Original strand, 31080686 - 31080727
Alignment:
Q  199 caaaactgctacagttacaaaacttagggggcagttttgtag 240  Q
    |||||||||||||||| |||||||||| |||| |||||||||    
T  31080686 caaaactgctacagttgcaaaacttagagggcggttttgtag 31080727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 407 - 440
Target Start/End: Original strand, 39467941 - 39467974
Alignment:
Q  407 tgaattctagggtgagggttcaattaagtccctc 440  Q
    ||||||||||||||||||| ||||||||||||||    
T  39467941 tgaattctagggtgagggtccaattaagtccctc 39467974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 410 - 443
Target Start/End: Original strand, 39936260 - 39936293
Alignment:
Q  410 attctagggtgagggttcaattaagtccctcacc 443  Q
    |||||| |||||||||||||||||||||||||||    
T  39936260 attctaaggtgagggttcaattaagtccctcacc 39936293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 252 - 305
Target Start/End: Original strand, 41083351 - 41083404
Alignment:
Q  252 gggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagcct 305  Q
    ||||||||||||||| |||| ||||  |||||||| |||||||| |||||||||    
T  41083351 gggccaaaatcgcaattttttaaaatataggaggccaaaagtgcaattaagcct 41083404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 192 - 240
Target Start/End: Complemental strand, 3333806 - 3333758
Alignment:
Q  192 ggggggccaaaactgctacagttacaaaacttagggggcagttttgtag 240  Q
    |||||||||||||||||||| || |||||||||| || | |||||||||    
T  3333806 ggggggccaaaactgctacatttgcaaaacttagaggacggttttgtag 3333758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 252 - 304
Target Start/End: Complemental strand, 25693953 - 25693901
Alignment:
Q  252 gggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagcc 304  Q
    |||||||||||||||||||||||||  |||| ||| |||||| | ||||||||    
T  25693953 gggccaaaatcgcaacttttgaaaagatagggggccaaaagtacaattaagcc 25693901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 193 - 229
Target Start/End: Original strand, 35166493 - 35166529
Alignment:
Q  193 gggggccaaaactgctacagttacaaaacttaggggg 229  Q
    |||||||||||||||||||| | ||||||||||||||    
T  35166493 gggggccaaaactgctacagctgcaaaacttaggggg 35166529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 50)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 192 - 237
Target Start/End: Original strand, 35250319 - 35250364
Alignment:
Q  192 ggggggccaaaactgctacagttacaaaacttagggggcagttttg 237  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||    
T  35250319 ggggggccaaaactgctacagttgcaaaacttagggggcagttttg 35250364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 252 - 306
Target Start/End: Original strand, 17931988 - 17932042
Alignment:
Q  252 gggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagccta 306  Q
    ||||||||||||||||||| ||||| | |||||||||||| ||||||||||||||    
T  17931988 gggccaaaatcgcaactttggaaaagtgaggaggctaaaactgctattaagccta 17932042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 406 - 444
Target Start/End: Complemental strand, 42818600 - 42818562
Alignment:
Q  406 gtgaattctagggtgagggttcaattaagtccctcaccg 444  Q
    |||||||||||||||||||||||||||||||||||||||    
T  42818600 gtgaattctagggtgagggttcaattaagtccctcaccg 42818562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 406 - 443
Target Start/End: Complemental strand, 30581313 - 30581276
Alignment:
Q  406 gtgaattctagggtgagggttcaattaagtccctcacc 443  Q
    ||||||||||||||||||||||||||||||||||||||    
T  30581313 gtgaattctagggtgagggttcaattaagtccctcacc 30581276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 192 - 240
Target Start/End: Original strand, 4049921 - 4049969
Alignment:
Q  192 ggggggccaaaactgctacagttacaaaacttagggggcagttttgtag 240  Q
    ||||||||||||||||||||||| |||| |||||||||| |||||||||    
T  4049921 ggggggccaaaactgctacagttgcaaaccttagggggcggttttgtag 4049969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 192 - 240
Target Start/End: Original strand, 5172723 - 5172771
Alignment:
Q  192 ggggggccaaaactgctacagttacaaaacttagggggcagttttgtag 240  Q
    ||||| ||||||||||||||||| ||||||||||||||| |||||||||    
T  5172723 gggggaccaaaactgctacagttgcaaaacttagggggcggttttgtag 5172771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 192 - 240
Target Start/End: Original strand, 20185116 - 20185164
Alignment:
Q  192 ggggggccaaaactgctacagttacaaaacttagggggcagttttgtag 240  Q
    ||||||||||||||||||||||| ||||||||||| ||| |||||||||    
T  20185116 ggggggccaaaactgctacagttgcaaaacttaggaggcggttttgtag 20185164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 193 - 304
Target Start/End: Original strand, 36903471 - 36903581
Alignment:
Q  193 gggggccaaaactgctacagttacaaaacttagggggcagttttgtagnnnnnnnnnaggggccaaaatcgcaacttttgaaaaattaggaggctaaaag 292  Q
    |||||| ||||||||||||||| |||||||||||| ||||||||||||         | |||||||||||||||| ||  |||| ||||| || |||||     
T  36903471 gggggctaaaactgctacagttgcaaaacttagggtgcagttttgtagttttttttaa-gggccaaaatcgcaacattgaaaaagttagggggttaaaac 36903569  T
Q  293 tgctattaagcc 304  Q
    ||||||||||||    
T  36903570 tgctattaagcc 36903581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 255 - 310
Target Start/End: Original strand, 6792061 - 6792116
Alignment:
Q  255 ccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagcctaaaaa 310  Q
    |||||||||||||||| ||||| ||||| |||||||| ||||||||| ||||||||    
T  6792061 ccaaaatcgcaactttggaaaagttagggggctaaaactgctattaaacctaaaaa 6792116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 251 - 306
Target Start/End: Original strand, 15107250 - 15107305
Alignment:
Q  251 ggggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagccta 306  Q
    ||||||||||||| |||||| ||||||||||| || ||||| ||||||||||||||    
T  15107250 ggggccaaaatcgtaactttggaaaaattaggggggtaaaactgctattaagccta 15107305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 193 - 240
Target Start/End: Original strand, 15348157 - 15348204
Alignment:
Q  193 gggggccaaaactgctacagttacaaaacttagggggcagttttgtag 240  Q
    |||||||||||||||||| ||| ||||||||||||||| |||||||||    
T  15348157 gggggccaaaactgctacggttgcaaaacttagggggcggttttgtag 15348204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 409 - 444
Target Start/End: Original strand, 36611555 - 36611590
Alignment:
Q  409 aattctagggtgagggttcaattaagtccctcaccg 444  Q
    ||||||||||||||||||||||||||||||||||||    
T  36611555 aattctagggtgagggttcaattaagtccctcaccg 36611590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 251 - 305
Target Start/End: Complemental strand, 29163153 - 29163099
Alignment:
Q  251 ggggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagcct 305  Q
    ||||||||||||||||||||||||||  |||| ||| |||||||| |||||||||    
T  29163153 ggggccaaaatcgcaacttttgaaaagatagggggcaaaaagtgcaattaagcct 29163099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 406 - 442
Target Start/End: Complemental strand, 7329115 - 7329079
Alignment:
Q  406 gtgaattctagggtgagggttcaattaagtccctcac 442  Q
    |||| ||||||||||||||||||||||||||||||||    
T  7329115 gtgacttctagggtgagggttcaattaagtccctcac 7329079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 401 - 441
Target Start/End: Original strand, 10590294 - 10590334
Alignment:
Q  401 ttcttgtgaattctagggtgagggttcaattaagtccctca 441  Q
    |||||||| ||||||||||||| ||||||||||||||||||    
T  10590294 ttcttgtggattctagggtgagagttcaattaagtccctca 10590334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 192 - 228
Target Start/End: Original strand, 28472578 - 28472614
Alignment:
Q  192 ggggggccaaaactgctacagttacaaaacttagggg 228  Q
    ||||||||||||||||||||||| |||||||||||||    
T  28472578 ggggggccaaaactgctacagttgcaaaacttagggg 28472614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 196 - 240
Target Start/End: Complemental strand, 36580384 - 36580340
Alignment:
Q  196 ggccaaaactgctacagttacaaaacttagggggcagttttgtag 240  Q
    ||||||||||||||||||| ||||||||||||| | |||||||||    
T  36580384 ggccaaaactgctacagttgcaaaacttaggggacggttttgtag 36580340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 254 - 298
Target Start/End: Complemental strand, 45717950 - 45717906
Alignment:
Q  254 gccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctat 298  Q
    ||||||||| ||||||| |||||||||||||||||||| ||||||    
T  45717950 gccaaaatcacaactttggaaaaattaggaggctaaaactgctat 45717906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 253 - 304
Target Start/End: Original strand, 8409334 - 8409385
Alignment:
Q  253 ggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagcc 304  Q
    ||||||||||||||||||| ||||  |||||||| |||||||| ||||||||    
T  8409334 ggccaaaatcgcaacttttaaaaagataggaggccaaaagtgcaattaagcc 8409385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 410 - 441
Target Start/End: Original strand, 17114150 - 17114181
Alignment:
Q  410 attctagggtgagggttcaattaagtccctca 441  Q
    ||||||||||||||||||||||||||||||||    
T  17114150 attctagggtgagggttcaattaagtccctca 17114181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 250 - 305
Target Start/End: Complemental strand, 17167908 - 17167854
Alignment:
Q  250 aggggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagcct 305  Q
    |||||||||||||||||||||||||||  |||| ||| |||||||| |||||||||    
T  17167908 aggggccaaaatcgcaacttttgaaaagatagg-ggccaaaagtgcaattaagcct 17167854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 251 - 306
Target Start/End: Complemental strand, 41243697 - 41243642
Alignment:
Q  251 ggggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagccta 306  Q
    ||||| ||||| |||||||| ||||| ||||| |||||||| ||||||||||||||    
T  41243697 ggggctaaaattgcaactttggaaaagttagggggctaaaactgctattaagccta 41243642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 410 - 444
Target Start/End: Original strand, 767141 - 767175
Alignment:
Q  410 attctagggtgagggttcaattaagtccctcaccg 444  Q
    |||||||||||||||| ||||||||||||||||||    
T  767141 attctagggtgagggtccaattaagtccctcaccg 767175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 406 - 444
Target Start/End: Complemental strand, 2403488 - 2403450
Alignment:
Q  406 gtgaattctagggtgagggttcaattaagtccctcaccg 444  Q
    |||||||||||| ||||||||||| ||||||||||||||    
T  2403488 gtgaattctaggatgagggttcaactaagtccctcaccg 2403450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 410 - 444
Target Start/End: Original strand, 3314960 - 3314994
Alignment:
Q  410 attctagggtgagggttcaattaagtccctcaccg 444  Q
    |||||| ||||||||||||||||||||||||||||    
T  3314960 attctacggtgagggttcaattaagtccctcaccg 3314994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 250 - 308
Target Start/End: Complemental strand, 4049760 - 4049702
Alignment:
Q  250 aggggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagcctaaa 308  Q
    ||||||||||||||||||||| ||||| ||||  |||||||| |||| |||| ||||||    
T  4049760 aggggccaaaatcgcaactttagaaaagttagtgggctaaaactgctgttaaacctaaa 4049702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 251 - 305
Target Start/End: Original strand, 18201644 - 18201698
Alignment:
Q  251 ggggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagcct 305  Q
    ||||||||||||||||||||||||||   ||| ||| |||||||| |||||||||    
T  18201644 ggggccaaaatcgcaacttttgaaaagacagggggccaaaagtgcaattaagcct 18201698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 251 - 305
Target Start/End: Complemental strand, 33159537 - 33159483
Alignment:
Q  251 ggggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagcct 305  Q
    ||||||||||||||||||||| ||||  |||| || ||||||||| |||||||||    
T  33159537 ggggccaaaatcgcaacttttaaaaagatagggggttaaaagtgcaattaagcct 33159483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 410 - 444
Target Start/End: Complemental strand, 41965820 - 41965786
Alignment:
Q  410 attctagggtgagggttcaattaagtccctcaccg 444  Q
    |||||||||||||||| ||||||||||||||||||    
T  41965820 attctagggtgagggtccaattaagtccctcaccg 41965786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 410 - 444
Target Start/End: Complemental strand, 44876977 - 44876943
Alignment:
Q  410 attctagggtgagggttcaattaagtccctcaccg 444  Q
    ||||||||||||||| |||||||||||||||||||    
T  44876977 attctagggtgagggatcaattaagtccctcaccg 44876943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 410 - 444
Target Start/End: Complemental strand, 46491731 - 46491697
Alignment:
Q  410 attctagggtgagggttcaattaagtccctcaccg 444  Q
    |||||||||||||||||||| ||||||||||||||    
T  46491731 attctagggtgagggttcaactaagtccctcaccg 46491697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 255 - 308
Target Start/End: Complemental strand, 3318367 - 3318314
Alignment:
Q  255 ccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagcctaaa 308  Q
    |||||||||||||||| ||||| ||| | |||||||| | ||||||||||||||    
T  3318367 ccaaaatcgcaactttggaaaagttaaggggctaaaactcctattaagcctaaa 3318314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 195 - 240
Target Start/End: Original strand, 8074076 - 8074121
Alignment:
Q  195 gggccaaaactgctacagttacaaaacttagggggcagttttgtag 240  Q
    |||||||||||||||||||| |||||||| |||| | |||||||||    
T  8074076 gggccaaaactgctacagttgcaaaactttggggacggttttgtag 8074121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 195 - 240
Target Start/End: Complemental strand, 11374061 - 11374016
Alignment:
Q  195 gggccaaaactgctacagttacaaaacttagggggcagttttgtag 240  Q
    ||||||||||||||| |||| |||||||||||| | ||||||||||    
T  11374061 gggccaaaactgctaaagttgcaaaacttagggtgtagttttgtag 11374016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 251 - 308
Target Start/End: Complemental strand, 20184969 - 20184912
Alignment:
Q  251 ggggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagcctaaa 308  Q
    ||||| |||||||||||||| ||||| |||||  ||||||| || |||||||||||||    
T  20184969 ggggctaaaatcgcaactttggaaaagttagggagctaaaactgttattaagcctaaa 20184912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 195 - 240
Target Start/End: Complemental strand, 28785869 - 28785824
Alignment:
Q  195 gggccaaaactgctacagttacaaaacttagggggcagttttgtag 240  Q
    ||||||||||| | |||||| ||||||||||||||| |||||||||    
T  28785869 gggccaaaactacaacagttgcaaaacttagggggcggttttgtag 28785824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 307
Target Start/End: Complemental strand, 35250173 - 35250116
Alignment:
Q  250 aggggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagcctaa 307  Q
    |||| |||||||||||||||| ||||| ||||  |||||||| | |||||||||||||    
T  35250173 agggaccaaaatcgcaactttggaaaagttagagggctaaaactactattaagcctaa 35250116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 251 - 308
Target Start/End: Original strand, 40790931 - 40790987
Alignment:
Q  251 ggggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagcctaaa 308  Q
    |||||||||||||||||||||| |||  |||| ||| |||||||| ||||||||||||    
T  40790931 ggggccaaaatcgcaacttttggaaagatagg-ggccaaaagtgcaattaagcctaaa 40790987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 195 - 240
Target Start/End: Complemental strand, 40872278 - 40872233
Alignment:
Q  195 gggccaaaactgctacagttacaaaacttagggggcagttttgtag 240  Q
    ||||| |||||||||||||||||||||||| ||| | |||||||||    
T  40872278 gggcctaaactgctacagttacaaaacttatgggacggttttgtag 40872233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 251 - 308
Target Start/End: Complemental strand, 48925964 - 48925907
Alignment:
Q  251 ggggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagcctaaa 308  Q
    ||||||||||||||||||||||||||  |||| | | |||||||| ||||| ||||||    
T  48925964 ggggccaaaatcgcaacttttgaaaagataggggacaaaaagtgcaattaaacctaaa 48925907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 251 - 306
Target Start/End: Original strand, 282862 - 282917
Alignment:
Q  251 ggggccaaaatcgcaactt-ttgaaaaattaggaggctaaaagtgctattaagccta 306  Q
    ||||||||||||||||||| |||||| | |||||||| |||| ||||||||||||||    
T  282862 ggggccaaaatcgcaacttcttgaaaca-taggaggccaaaactgctattaagccta 282917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 196 - 240
Target Start/End: Original strand, 3247377 - 3247421
Alignment:
Q  196 ggccaaaactgctacagttacaaaacttagggggcagttttgtag 240  Q
    ||||||||||||||||||| ||||| ||||| ||| |||||||||    
T  3247377 ggccaaaactgctacagttgcaaaatttaggaggcggttttgtag 3247421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 192 - 228
Target Start/End: Complemental strand, 10097669 - 10097633
Alignment:
Q  192 ggggggccaaaactgctacagttacaaaacttagggg 228  Q
    |||||||||||||||||||| || |||||||||||||    
T  10097669 ggggggccaaaactgctacaattgcaaaacttagggg 10097633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 256 - 304
Target Start/End: Original strand, 11742923 - 11742971
Alignment:
Q  256 caaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagcc 304  Q
    |||||||||||||||||||||  |||| ||| |||||||| ||||||||    
T  11742923 caaaatcgcaacttttgaaaagatagggggccaaaagtgcaattaagcc 11742971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 196 - 240
Target Start/End: Complemental strand, 18186550 - 18186506
Alignment:
Q  196 ggccaaaactgctacagttacaaaacttagggggcagttttgtag 240  Q
    |||||||||||||| |||| ||||||||||| ||| |||||||||    
T  18186550 ggccaaaactgctatagttgcaaaacttaggaggcggttttgtag 18186506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 251 - 303
Target Start/End: Complemental strand, 28472442 - 28472391
Alignment:
Q  251 ggggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagc 303  Q
    |||| ||||||||||||||| ||||| ||||| |||||||| |||||||||||    
T  28472442 ggggtcaaaatcgcaactttggaaaagttagg-ggctaaaactgctattaagc 28472391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 252 - 308
Target Start/End: Original strand, 28786019 - 28786075
Alignment:
Q  252 gggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagcctaaa 308  Q
    ||||||||||| ||||||| ||||| ||| | || ||||| ||||||||||||||||    
T  28786019 gggccaaaatcacaactttggaaaagttatggggttaaaactgctattaagcctaaa 28786075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 250 - 306
Target Start/End: Original strand, 36204441 - 36204497
Alignment:
Q  250 aggggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagccta 306  Q
    ||||| |||||||||||||||||||||  |||| ||| |||||||| ||||| ||||    
T  36204441 aggggtcaaaatcgcaacttttgaaaagatagggggccaaaagtgcaattaaaccta 36204497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 409 - 441
Target Start/End: Complemental strand, 36611782 - 36611750
Alignment:
Q  409 aattctagggtgagggttcaattaagtccctca 441  Q
    |||| ||||||||||||||||||||||||||||    
T  36611782 aattttagggtgagggttcaattaagtccctca 36611750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 199 - 239
Target Start/End: Complemental strand, 47909689 - 47909649
Alignment:
Q  199 caaaactgctacagttacaaaacttagggggcagttttgta 239  Q
    ||||||||| |||||  ||||||||||||||||||||||||    
T  47909689 caaaactgccacagtgtcaaaacttagggggcagttttgta 47909649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 68)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 252 - 305
Target Start/End: Complemental strand, 38957897 - 38957844
Alignment:
Q  252 gggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagcct 305  Q
    |||||||||||||||||||  ||||||||||||||||||| |||||||||||||    
T  38957897 gggccaaaatcgcaactttaaaaaaattaggaggctaaaactgctattaagcct 38957844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 192 - 240
Target Start/End: Complemental strand, 44436503 - 44436455
Alignment:
Q  192 ggggggccaaaactgctacagttacaaaacttagggggcagttttgtag 240  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||||    
T  44436503 ggggggccaaaactgctacagttgcaaaacttagggggcggttttgtag 44436455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 192 - 239
Target Start/End: Complemental strand, 51315609 - 51315562
Alignment:
Q  192 ggggggccaaaactgctacagttacaaaacttagggggcagttttgta 239  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  51315609 ggggggccaaaactgctacagttgcaaaacttagggggcggttttgta 51315562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 251 - 310
Target Start/End: Original strand, 51315745 - 51315804
Alignment:
Q  251 ggggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagcctaaaaa 310  Q
    |||||||||||||||||||| | ||| ||||| |||||||| ||||||||||||||||||    
T  51315745 ggggccaaaatcgcaactttgggaaagttagggggctaaaactgctattaagcctaaaaa 51315804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 192 - 309
Target Start/End: Original strand, 4474269 - 4474386
Alignment:
Q  192 ggggggccaaaactgctacagttacaaaacttagggggcagttttgtagnnnnnnnnnaggggccaaaatcgcaacttttgaaaaattaggaggctaaaa 291  Q
    ||||||||||||||||||||||| |||||||||| |||| ||||||||           |||||||||||||||||||   |||| ||||||||  ||||    
T  4474269 ggggggccaaaactgctacagttgcaaaacttagagggcggttttgtaattttttttagggggccaaaatcgcaacttcgtaaaagttaggaggagaaaa 4474368  T
Q  292 gtgctattaagcctaaaa 309  Q
     ||||||||| |||||||    
T  4474369 ctgctattaaacctaaaa 4474386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 250 - 306
Target Start/End: Original strand, 578671 - 578727
Alignment:
Q  250 aggggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagccta 306  Q
    ||||||||||||||||||||| ||||| |||||||||||||| || |||||| ||||    
T  578671 aggggccaaaatcgcaactttggaaaagttaggaggctaaaactgatattaaaccta 578727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 192 - 240
Target Start/End: Original strand, 25154380 - 25154428
Alignment:
Q  192 ggggggccaaaactgctacagttacaaaacttagggggcagttttgtag 240  Q
    ||||||||||||||||||||||| ||||||||| ||||| |||||||||    
T  25154380 ggggggccaaaactgctacagttgcaaaacttaaggggcggttttgtag 25154428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 250 - 305
Target Start/End: Complemental strand, 7569185 - 7569130
Alignment:
Q  250 aggggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagcct 305  Q
    |||||||||||||||||||||||||||  ||||| || |||||||| |||||||||    
T  7569185 aggggccaaaatcgcaacttttgaaaagataggacgccaaaagtgcaattaagcct 7569130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 192 - 239
Target Start/End: Complemental strand, 8024889 - 8024842
Alignment:
Q  192 ggggggccaaaactgctacagttacaaaacttagggggcagttttgta 239  Q
    ||||||||||||||||||||||| |||||| |||||||| ||||||||    
T  8024889 ggggggccaaaactgctacagttgcaaaacgtagggggcggttttgta 8024842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 194 - 307
Target Start/End: Original strand, 15978893 - 15979007
Alignment:
Q  194 ggggccaaaactgctacagttacaaaacttagggggcagttttgtagnnnnnnnnna-ggggccaaaatcgcaacttttgaaaaattaggaggctaaaag 292  Q
    |||||||||||||||| |||| ||||||||||||||| |||||||||         |  ||||||||||||||| ||| ||||| ||| | ||||||||     
T  15978893 ggggccaaaactgctatagttgcaaaacttagggggcggttttgtagtttttttttatagggccaaaatcgcaattttagaaaagttacggggctaaaac 15978992  T
Q  293 tgctattaagcctaa 307  Q
    | |||||||||||||    
T  15978993 tactattaagcctaa 15979007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 406 - 444
Target Start/End: Complemental strand, 55374 - 55336
Alignment:
Q  406 gtgaattctagggtgagggttcaattaagtccctcaccg 444  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  55374 gtgaattctaggatgagggttcaattaagtccctcaccg 55336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 406 - 444
Target Start/End: Complemental strand, 18745417 - 18745379
Alignment:
Q  406 gtgaattctagggtgagggttcaattaagtccctcaccg 444  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  18745417 gtgaattctagggtgagggttcaatcaagtccctcaccg 18745379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 410 - 444
Target Start/End: Original strand, 20807942 - 20807976
Alignment:
Q  410 attctagggtgagggttcaattaagtccctcaccg 444  Q
    |||||||||||||||||||||||||||||||||||    
T  20807942 attctagggtgagggttcaattaagtccctcaccg 20807976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 194 - 240
Target Start/End: Original strand, 38958046 - 38958092
Alignment:
Q  194 ggggccaaaactgctacagttacaaaacttagggggcagttttgtag 240  Q
    |||| |||||||||||||||| ||||||||||||||| |||||||||    
T  38958046 ggggtcaaaactgctacagttgcaaaacttagggggcggttttgtag 38958092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 406 - 444
Target Start/End: Complemental strand, 47571986 - 47571948
Alignment:
Q  406 gtgaattctagggtgagggttcaattaagtccctcaccg 444  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  47571986 gtgaattctagggtgagggatcaattaagtccctcaccg 47571948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 410 - 444
Target Start/End: Original strand, 54308458 - 54308492
Alignment:
Q  410 attctagggtgagggttcaattaagtccctcaccg 444  Q
    |||||||||||||||||||||||||||||||||||    
T  54308458 attctagggtgagggttcaattaagtccctcaccg 54308492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 407 - 444
Target Start/End: Complemental strand, 29516595 - 29516558
Alignment:
Q  407 tgaattctagggtgagggttcaattaagtccctcaccg 444  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  29516595 tgaattctacggtgagggttcaattaagtccctcaccg 29516558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 251 - 304
Target Start/End: Complemental strand, 45125148 - 45125095
Alignment:
Q  251 ggggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagcc 304  Q
    ||||||||||||||||||||||||||  |||  |||||||||||| ||||||||    
T  45125148 ggggccaaaatcgcaacttttgaaaagatagagggctaaaagtgcaattaagcc 45125095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 406 - 443
Target Start/End: Original strand, 54753578 - 54753615
Alignment:
Q  406 gtgaattctagggtgagggttcaattaagtccctcacc 443  Q
    |||||||||| |||||||||||||||||||||||||||    
T  54753578 gtgaattctacggtgagggttcaattaagtccctcacc 54753615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 255 - 303
Target Start/End: Original strand, 1814818 - 1814866
Alignment:
Q  255 ccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagc 303  Q
    ||||||||| |||||| ||||| |||||||||||||| |||||||||||    
T  1814818 ccaaaatcgaaactttggaaaagttaggaggctaaaactgctattaagc 1814866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 254 - 306
Target Start/End: Original strand, 7218419 - 7218471
Alignment:
Q  254 gccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagccta 306  Q
    |||||||||||||||||  |||||||||| |||||||| ||||||||| ||||    
T  7218419 gccaaaatcgcaactttaaaaaaattagggggctaaaattgctattaaaccta 7218471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 192 - 240
Target Start/End: Original strand, 14349311 - 14349359
Alignment:
Q  192 ggggggccaaaactgctacagttacaaaacttagggggcagttttgtag 240  Q
    ||||||||||||||| ||||||| ||||||||| | |||||||||||||    
T  14349311 ggggggccaaaactgttacagttgcaaaacttaagaggcagttttgtag 14349359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 192 - 240
Target Start/End: Complemental strand, 44585902 - 44585854
Alignment:
Q  192 ggggggccaaaactgctacagttacaaaacttagggggcagttttgtag 240  Q
    ||||||| ||||||||||||||| ||||| ||||||||| |||||||||    
T  44585902 ggggggcgaaaactgctacagttgcaaaatttagggggcggttttgtag 44585854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 192 - 239
Target Start/End: Original strand, 86762 - 86809
Alignment:
Q  192 ggggggccaaaactgctacagttacaaaacttagggggcagttttgta 239  Q
    ||||| ||||||||||||||||| ||||||||||| ||| ||||||||    
T  86762 gggggaccaaaactgctacagttgcaaaacttaggaggcggttttgta 86809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 255 - 314
Target Start/End: Original strand, 20432448 - 20432506
Alignment:
Q  255 ccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagcctaaaaattaa 314  Q
    |||||||| ||||||||||||| ||||| || ||||| |||||||||||| |||||||||    
T  20432448 ccaaaatcacaacttttgaaaagttagggggttaaaaatgctattaagcc-aaaaattaa 20432506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 193 - 240
Target Start/End: Original strand, 44436598 - 44436645
Alignment:
Q  193 gggggccaaaactgctacagttacaaaacttagggggcagttttgtag 240  Q
    ||||||||||||||| |||| | ||||||||||||||| |||||||||    
T  44436598 gggggccaaaactgccacagatgcaaaacttagggggcggttttgtag 44436645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 251 - 306
Target Start/End: Complemental strand, 46934092 - 46934037
Alignment:
Q  251 ggggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagccta 306  Q
    ||||| ||||||||||||||||||||  |||| ||| |||||||| ||||||||||    
T  46934092 ggggctaaaatcgcaacttttgaaaagatagggggccaaaagtgcaattaagccta 46934037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 251 - 310
Target Start/End: Original strand, 46934248 - 46934307
Alignment:
Q  251 ggggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagcctaaaaa 310  Q
    ||||||| |||||||||||||| |||  |||| ||| |||||||| ||||||||||||||    
T  46934248 ggggccataatcgcaacttttggaaagatagggggccaaaagtgcaattaagcctaaaaa 46934307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 193 - 240
Target Start/End: Original strand, 51315684 - 51315731
Alignment:
Q  193 gggggccaaaactgctacagttacaaaacttagggggcagttttgtag 240  Q
    ||||||||||||||| |||| | ||||||||||||||| |||||||||    
T  51315684 gggggccaaaactgccacaggtgcaaaacttagggggcggttttgtag 51315731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 251 - 306
Target Start/End: Original strand, 53255285 - 53255340
Alignment:
Q  251 ggggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagccta 306  Q
    ||||||||||||||||||| | ||||  |||||||| |||| ||||||||||||||    
T  53255285 ggggccaaaatcgcaacttcttaaaacataggaggccaaaactgctattaagccta 53255340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 251 - 310
Target Start/End: Complemental strand, 54716529 - 54716470
Alignment:
Q  251 ggggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagcctaaaaa 310  Q
    |||| ||||||| |||||||||||||  |||| ||| |||||||| ||||||||||||||    
T  54716529 ggggtcaaaatcacaacttttgaaaagatagggggccaaaagtgcaattaagcctaaaaa 54716470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 410 - 444
Target Start/End: Complemental strand, 4706999 - 4706965
Alignment:
Q  410 attctagggtgagggttcaattaagtccctcaccg 444  Q
    |||||||||||||||||| ||||||||||||||||    
T  4706999 attctagggtgagggttctattaagtccctcaccg 4706965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 410 - 444
Target Start/End: Original strand, 9830577 - 9830611
Alignment:
Q  410 attctagggtgagggttcaattaagtccctcaccg 444  Q
    ||||| |||||||||||||||||||||||||||||    
T  9830577 attctcgggtgagggttcaattaagtccctcaccg 9830611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 410 - 444
Target Start/End: Original strand, 15287572 - 15287606
Alignment:
Q  410 attctagggtgagggttcaattaagtccctcaccg 444  Q
    |||||||||||||||| ||||||||||||||||||    
T  15287572 attctagggtgagggtccaattaagtccctcaccg 15287606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 406 - 444
Target Start/End: Complemental strand, 15288334 - 15288296
Alignment:
Q  406 gtgaattctagggtgagggttcaattaagtccctcaccg 444  Q
    |||||||||||||||||| ||||||||||| ||||||||    
T  15288334 gtgaattctagggtgaggattcaattaagttcctcaccg 15288296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 406 - 444
Target Start/End: Original strand, 17353803 - 17353841
Alignment:
Q  406 gtgaattctagggtgagggttcaattaagtccctcaccg 444  Q
    ||||||||||| ||||||||||||||||||||| |||||    
T  17353803 gtgaattctagtgtgagggttcaattaagtcccacaccg 17353841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 194 - 240
Target Start/End: Complemental strand, 19404509 - 19404463
Alignment:
Q  194 ggggccaaaactgctacagttacaaaacttagggggcagttttgtag 240  Q
    ||||| |||||||||| |||| ||||| |||||||||||||||||||    
T  19404509 ggggctaaaactgctatagttgcaaaatttagggggcagttttgtag 19404463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 410 - 444
Target Start/End: Complemental strand, 20808650 - 20808616
Alignment:
Q  410 attctagggtgagggttcaattaagtccctcaccg 444  Q
    |||||||||||||||||||| ||||||||||||||    
T  20808650 attctagggtgagggttcaagtaagtccctcaccg 20808616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 194 - 240
Target Start/End: Original strand, 28712663 - 28712709
Alignment:
Q  194 ggggccaaaactgctacagttacaaaacttagggggcagttttgtag 240  Q
    |||| |||||||||||||||| |||||||||||||||  ||||||||    
T  28712663 ggggtcaaaactgctacagttgcaaaacttagggggcgattttgtag 28712709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 251 - 305
Target Start/End: Original strand, 36567135 - 36567189
Alignment:
Q  251 ggggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagcct 305  Q
    ||||||| || ||||||||||||||| ||||||||| |||| ||| |||||||||    
T  36567135 ggggccataaccgcaacttttgaaaagttaggaggccaaaaatgcaattaagcct 36567189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 251 - 301
Target Start/End: Original strand, 44586047 - 44586097
Alignment:
Q  251 ggggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaa 301  Q
    |||||||||||||||||||| | ||| ||||| |||||||| |||||||||    
T  44586047 ggggccaaaatcgcaactttgggaaagttagggggctaaaactgctattaa 44586097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 410 - 444
Target Start/End: Original strand, 47571201 - 47571235
Alignment:
Q  410 attctagggtgagggttcaattaagtccctcaccg 444  Q
    ||||||||||||||| |||||||||||||||||||    
T  47571201 attctagggtgagggatcaattaagtccctcaccg 47571235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 410 - 440
Target Start/End: Complemental strand, 48626157 - 48626127
Alignment:
Q  410 attctagggtgagggttcaattaagtccctc 440  Q
    |||||||||||||||||||||||||||||||    
T  48626157 attctagggtgagggttcaattaagtccctc 48626127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 410 - 444
Target Start/End: Original strand, 49349681 - 49349715
Alignment:
Q  410 attctagggtgagggttcaattaagtccctcaccg 444  Q
    ||||||||||||||| |||||||||||||||||||    
T  49349681 attctagggtgagggatcaattaagtccctcaccg 49349715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 410 - 440
Target Start/End: Complemental strand, 49350313 - 49350283
Alignment:
Q  410 attctagggtgagggttcaattaagtccctc 440  Q
    |||||||||||||||||||||||||||||||    
T  49350313 attctagggtgagggttcaattaagtccctc 49350283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 254 - 308
Target Start/End: Complemental strand, 51187768 - 51187714
Alignment:
Q  254 gccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagcctaaa 308  Q
    ||||||||| |||||||||||||  || ||||| |||||||| ||||||||||||    
T  51187768 gccaaaatctcaacttttgaaaagataagaggccaaaagtgcaattaagcctaaa 51187714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 406 - 444
Target Start/End: Complemental strand, 53346543 - 53346505
Alignment:
Q  406 gtgaattctagggtgagggttcaattaagtccctcaccg 444  Q
    ||||||||||  |||||||||||||||||||||||||||    
T  53346543 gtgaattctacagtgagggttcaattaagtccctcaccg 53346505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 252 - 305
Target Start/End: Complemental strand, 53568346 - 53568292
Alignment:
Q  252 gggccaaaatcgcaacttttgaaaaa-ttaggaggctaaaagtgctattaagcct 305  Q
    |||||||||||||||||||| |||||  |||||||| |||||||| |||||||||    
T  53568346 gggccaaaatcgcaacttttaaaaaagataggaggccaaaagtgcaattaagcct 53568292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 192 - 237
Target Start/End: Original strand, 3192981 - 3193026
Alignment:
Q  192 ggggggccaaaactgctacagttacaaaacttagggggcagttttg 237  Q
    ||||||||||||||| ||||||| ||||||||||||| | ||||||    
T  3192981 ggggggccaaaactgttacagttgcaaaacttaggggtcggttttg 3193026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 251 - 308
Target Start/End: Complemental strand, 42686535 - 42686478
Alignment:
Q  251 ggggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagcctaaa 308  Q
    |||| ||||||||||||||||  ||| |||||||| ||||| ||||||||| ||||||    
T  42686535 ggggtcaaaatcgcaactttttgaaacttaggaggttaaaactgctattaaacctaaa 42686478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 253 - 306
Target Start/End: Original strand, 44433329 - 44433382
Alignment:
Q  253 ggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagccta 306  Q
    |||| ||||||||||| | ||||| ||||| |||||||| ||||||||||||||    
T  44433329 ggccgaaatcgcaactgtggaaaagttagggggctaaaactgctattaagccta 44433382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 195 - 236
Target Start/End: Complemental strand, 47189708 - 47189667
Alignment:
Q  195 gggccaaaactgctacagttacaaaacttagggggcagtttt 236  Q
    |||||||||||||||||||| ||||||||| ||||| |||||    
T  47189708 gggccaaaactgctacagttgcaaaacttaaggggcggtttt 47189667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 256 - 309
Target Start/End: Original strand, 50725012 - 50725065
Alignment:
Q  256 caaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagcctaaaa 309  Q
    ||||||||||| |||||||||  |||| ||| |||||||| |||||||||||||    
T  50725012 caaaatcgcaagttttgaaaagatagggggccaaaagtgcaattaagcctaaaa 50725065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 256 - 309
Target Start/End: Complemental strand, 50787838 - 50787785
Alignment:
Q  256 caaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagcctaaaa 309  Q
    ||||||||||| |||||||||  |||| ||| |||||||| |||||||||||||    
T  50787838 caaaatcgcaagttttgaaaagatagggggccaaaagtgcaattaagcctaaaa 50787785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 411 - 444
Target Start/End: Original strand, 51920720 - 51920753
Alignment:
Q  411 ttctagggtgagggttcaattaagtccctcaccg 444  Q
    ||||||||||||||| ||||||||||||||||||    
T  51920720 ttctagggtgagggtccaattaagtccctcaccg 51920753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 192 - 225
Target Start/End: Complemental strand, 54719105 - 54719072
Alignment:
Q  192 ggggggccaaaactgctacagttacaaaacttag 225  Q
    ||||||||||||||||||||||| ||||||||||    
T  54719105 ggggggccaaaactgctacagttgcaaaacttag 54719072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 410 - 442
Target Start/End: Complemental strand, 2226743 - 2226711
Alignment:
Q  410 attctagggtgagggttcaattaagtccctcac 442  Q
    |||||||||||||||||||||||| ||||||||    
T  2226743 attctagggtgagggttcaattaattccctcac 2226711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 196 - 228
Target Start/End: Complemental strand, 12759618 - 12759586
Alignment:
Q  196 ggccaaaactgctacagttacaaaacttagggg 228  Q
    ||||||||||||||||||| |||||||||||||    
T  12759618 ggccaaaactgctacagttgcaaaacttagggg 12759586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 192 - 228
Target Start/End: Complemental strand, 17773284 - 17773248
Alignment:
Q  192 ggggggccaaaactgctacagttacaaaacttagggg 228  Q
    |||||||||||||||| |||||| |||||||||||||    
T  17773284 ggggggccaaaactgccacagttgcaaaacttagggg 17773248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 192 - 228
Target Start/End: Complemental strand, 19074585 - 19074549
Alignment:
Q  192 ggggggccaaaactgctacagttacaaaacttagggg 228  Q
    |||||||||||||||| |||||| |||||||||||||    
T  19074585 ggggggccaaaactgccacagttgcaaaacttagggg 19074549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 255 - 307
Target Start/End: Original strand, 19404659 - 19404711
Alignment:
Q  255 ccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagcctaa 307  Q
    |||||||||||||||| ||||| |||||||| ||||| |||| ||||| ||||    
T  19404659 ccaaaatcgcaactttagaaaagttaggaggttaaaactgctgttaagtctaa 19404711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 192 - 240
Target Start/End: Complemental strand, 25902516 - 25902469
Alignment:
Q  192 ggggggccaaaactgctacagttacaaaacttagggggcagttttgtag 240  Q
    ||||||||||||||| ||||||| ||||| ||| |||||||||||||||    
T  25902516 ggggggccaaaactgttacagttgcaaaattta-ggggcagttttgtag 25902469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 251 - 314
Target Start/End: Original strand, 40410134 - 40410198
Alignment:
Q  251 ggggccaaaatcgcaactttt-gaaaaattaggaggctaaaagtgctattaagcctaaaaattaa 314  Q
    ||||||||||||||||||||| || ||  |||| ||| |||||||| ||||||||||||| ||||    
T  40410134 ggggccaaaatcgcaacttttggacaagatagggggccaaaagtgcaattaagcctaaaatttaa 40410198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 410 - 442
Target Start/End: Original strand, 47677526 - 47677558
Alignment:
Q  410 attctagggtgagggttcaattaagtccctcac 442  Q
    |||||||| ||||||||||||||||||||||||    
T  47677526 attctaggatgagggttcaattaagtccctcac 47677558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 250 - 310
Target Start/End: Complemental strand, 47922184 - 47922124
Alignment:
Q  250 aggggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagcctaaaaa 310  Q
    ||||||||||||| ||||||||  |||| |||||||| |||| ||| |||||||| |||||    
T  47922184 aggggccaaaatcacaacttttagaaaaataggaggccaaaaatgcaattaagccaaaaaa 47922124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 251 - 303
Target Start/End: Complemental strand, 50802712 - 50802660
Alignment:
Q  251 ggggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagc 303  Q
    |||||||||||| ||||||| ||||| ||| |||| ||||| |||||||||||    
T  50802712 ggggccaaaatcacaactttggaaaagttaagaggttaaaactgctattaagc 50802660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 251 - 303
Target Start/End: Original strand, 50873165 - 50873217
Alignment:
Q  251 ggggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagc 303  Q
    |||||||||||| ||||||| ||||| ||| |||| ||||| |||||||||||    
T  50873165 ggggccaaaatcacaactttggaaaagttaagaggttaaaactgctattaagc 50873217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 192 - 240
Target Start/End: Original strand, 54464362 - 54464410
Alignment:
Q  192 ggggggccaaaactgctacagttacaaaacttagggggcagttttgtag 240  Q
    |||||||||||||||| | |||| ||||||||||||| | |||||||||    
T  54464362 ggggggccaaaactgccagagttgcaaaacttaggggccggttttgtag 54464410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 42)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 192 - 240
Target Start/End: Complemental strand, 30539103 - 30539055
Alignment:
Q  192 ggggggccaaaactgctacagttacaaaacttagggggcagttttgtag 240  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||||    
T  30539103 ggggggccaaaactgctacagttgtaaaacttagggggcagttttgtag 30539055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 216 - 308
Target Start/End: Original strand, 32071238 - 32071329
Alignment:
Q  216 caaaacttagggggcagttttgtagnnnnnnnnnaggggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagcctaaa 308  Q
    ||||||||||||||| |||||||||         ||||| ||||||||||||||| ||||| ||||| |||||||| ||||||||||||||||    
T  32071238 caaaacttagggggcggttttgtagttttttcttaggggtcaaaatcgcaactttagaaaagttagg-ggctaaaactgctattaagcctaaa 32071329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 250 - 311
Target Start/End: Complemental strand, 32498432 - 32498371
Alignment:
Q  250 aggggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagcctaaaaat 311  Q
    |||||||||||||||||||||||||||  |||| ||| |||||||| |||||||||| ||||    
T  32498432 aggggccaaaatcgcaacttttgaaaagatagggggccaaaagtgcaattaagcctagaaat 32498371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 197 - 301
Target Start/End: Complemental strand, 37940021 - 37939917
Alignment:
Q  197 gccaaaactgctacagttacaaaacttagggggcagttttgtagnnnnnnnnnaggggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgct 296  Q
    ||||||||||| |||  | ||||||||||||||  |||||||||         |||||||||||||||||||||  |||||||| |||||||||| ||||    
T  37940021 gccaaaactgccacatatgcaaaacttagggggtggttttgtagttttttttaaggggccaaaatcgcaactttgaaaaaattaagaggctaaaactgct 37939922  T
Q  297 attaa 301  Q
    |||||    
T  37939921 attaa 37939917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 192 - 240
Target Start/End: Complemental strand, 35213143 - 35213095
Alignment:
Q  192 ggggggccaaaactgctacagttacaaaacttagggggcagttttgtag 240  Q
    ||||||||||||||| ||||||| ||||||||| |||||||||||||||    
T  35213143 ggggggccaaaactgttacagttgcaaaacttaaggggcagttttgtag 35213095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 196 - 240
Target Start/End: Complemental strand, 41487311 - 41487267
Alignment:
Q  196 ggccaaaactgctacagttacaaaacttagggggcagttttgtag 240  Q
    ||||||||||||||||||| ||||||||||||||| |||||||||    
T  41487311 ggccaaaactgctacagttgcaaaacttagggggcggttttgtag 41487267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 251 - 306
Target Start/End: Complemental strand, 31947907 - 31947852
Alignment:
Q  251 ggggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagccta 306  Q
    ||||||||||||||||||||||||||  |||| ||| |||||||| ||||||||||    
T  31947907 ggggccaaaatcgcaacttttgaaaagatagggggccaaaagtgcaattaagccta 31947852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 193 - 308
Target Start/End: Original strand, 41487410 - 41487527
Alignment:
Q  193 gggggccaaaactgctacagttacaaaacttagggggcagttttgtagnnnnnnnnn--aggggccaaaatcgcaacttttgaaaaattaggaggctaaa 290  Q
    |||||||||||| ||||||||| ||||||||||||||| |||||||||           | |||| |||||||||||||| ||||| ||||  |||||||    
T  41487410 gggggccaaaacagctacagttgcaaaacttagggggcggttttgtagttttttttcttaagggctaaaatcgcaactttggaaaagttagagggctaaa 41487509  T
Q  291 agtgctattaagcctaaa 308  Q
    | ||||||||| ||||||    
T  41487510 actgctattaaacctaaa 41487527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 406 - 444
Target Start/End: Original strand, 202578 - 202616
Alignment:
Q  406 gtgaattctagggtgagggttcaattaagtccctcaccg 444  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  202578 gtgaattctaggatgagggttcaattaagtccctcaccg 202616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 406 - 444
Target Start/End: Original strand, 317415 - 317453
Alignment:
Q  406 gtgaattctagggtgagggttcaattaagtccctcaccg 444  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  317415 gtgaattctaggatgagggttcaattaagtccctcaccg 317453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 251 - 305
Target Start/End: Original strand, 23702395 - 23702449
Alignment:
Q  251 ggggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagcct 305  Q
    ||||| |||||||||||||||| ||| ||||| |||||||| |||||||||||||    
T  23702395 ggggctaaaatcgcaacttttggaaagttagggggctaaaactgctattaagcct 23702449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 406 - 444
Target Start/End: Complemental strand, 42094791 - 42094753
Alignment:
Q  406 gtgaattctagggtgagggttcaattaagtccctcaccg 444  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  42094791 gtgaattctagggtgagggatcaattaagtccctcaccg 42094753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 199 - 240
Target Start/End: Original strand, 21486857 - 21486898
Alignment:
Q  199 caaaactgctacagttacaaaacttagggggcagttttgtag 240  Q
    |||||||||||||||| ||||||||||| |||||||||||||    
T  21486857 caaaactgctacagttgcaaaacttaggaggcagttttgtag 21486898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 407 - 444
Target Start/End: Original strand, 36180689 - 36180726
Alignment:
Q  407 tgaattctagggtgagggttcaattaagtccctcaccg 444  Q
    |||||||||||||||||||| |||||||||||||||||    
T  36180689 tgaattctagggtgagggtttaattaagtccctcaccg 36180726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 406 - 442
Target Start/End: Complemental strand, 42664044 - 42664008
Alignment:
Q  406 gtgaattctagggtgagggttcaattaagtccctcac 442  Q
    ||||||| |||||||||||||||||||||||||||||    
T  42664044 gtgaattttagggtgagggttcaattaagtccctcac 42664008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 192 - 227
Target Start/End: Complemental strand, 17071021 - 17070986
Alignment:
Q  192 ggggggccaaaactgctacagttacaaaacttaggg 227  Q
    ||||||||||||||||||||||| ||||||||||||    
T  17071021 ggggggccaaaactgctacagttgcaaaacttaggg 17070986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 192 - 227
Target Start/End: Original strand, 17577251 - 17577286
Alignment:
Q  192 ggggggccaaaactgctacagttacaaaacttaggg 227  Q
    ||||||||||||||||||||||| ||||||||||||    
T  17577251 ggggggccaaaactgctacagttgcaaaacttaggg 17577286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 405 - 444
Target Start/End: Original strand, 22632322 - 22632361
Alignment:
Q  405 tgtgaattctagggtgagggttcaattaagtccctcaccg 444  Q
    |||| ||||||||||||||| |||||||||||||||||||    
T  22632322 tgtggattctagggtgagggatcaattaagtccctcaccg 22632361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 251 - 306
Target Start/End: Original strand, 28349568 - 28349623
Alignment:
Q  251 ggggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagccta 306  Q
    |||||||||||||||||||| | ||| ||||| |||||||| | ||||||||||||    
T  28349568 ggggccaaaatcgcaactttgggaaagttagggggctaaaactactattaagccta 28349623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 256 - 307
Target Start/End: Original strand, 37263601 - 37263652
Alignment:
Q  256 caaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagcctaa 307  Q
    ||||||||||||||||| ||| |||||||| ||||| || ||||||||||||    
T  37263601 caaaatcgcaacttttggaaagttaggaggttaaaattgatattaagcctaa 37263652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 193 - 240
Target Start/End: Original strand, 37813291 - 37813338
Alignment:
Q  193 gggggccaaaactgctacagttacaaaacttagggggcagttttgtag 240  Q
    ||||||||||||||| |||| | ||||||||||||||| |||||||||    
T  37813291 gggggccaaaactgccacagatgcaaaacttagggggcggttttgtag 37813338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 45177411 - 45177454
Alignment:
Q  196 ggccaaaactgctacagttacaaaacttagggggcagttttgta 239  Q
    |||||||||| |||||||| ||||||||| ||||||||||||||    
T  45177411 ggccaaaactactacagttgcaaaacttatggggcagttttgta 45177454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 410 - 444
Target Start/End: Complemental strand, 4402330 - 4402296
Alignment:
Q  410 attctagggtgagggttcaattaagtccctcaccg 444  Q
    |||||||||||||||||| ||||||||||||||||    
T  4402330 attctagggtgagggttctattaagtccctcaccg 4402296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 250 - 304
Target Start/End: Complemental strand, 9878413 - 9878359
Alignment:
Q  250 aggggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagcc 304  Q
    |||||||||||||||||||||||||||  |||| ||| |||| ||| ||||||||    
T  9878413 aggggccaaaatcgcaacttttgaaaatatagggggccaaaaatgcaattaagcc 9878359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 410 - 444
Target Start/End: Complemental strand, 16911089 - 16911055
Alignment:
Q  410 attctagggtgagggttcaattaagtccctcaccg 444  Q
    ||||||||||||||| |||||||||||||||||||    
T  16911089 attctagggtgagggctcaattaagtccctcaccg 16911055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 406 - 444
Target Start/End: Original strand, 19220914 - 19220952
Alignment:
Q  406 gtgaattctagggtgagggttcaattaagtccctcaccg 444  Q
    |||||||||||| ||||||||||||||||||| ||||||    
T  19220914 gtgaattctaggatgagggttcaattaagtccgtcaccg 19220952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 251 - 313
Target Start/End: Complemental strand, 20853431 - 20853369
Alignment:
Q  251 ggggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagcctaaaaatta 313  Q
    |||| ||||||||||||||    ||| ||||| |||||||| |||||||||||||||||||||    
T  20853431 ggggtcaaaatcgcaacttcaagaaagttagggggctaaaactgctattaagcctaaaaatta 20853369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 193 - 239
Target Start/End: Original strand, 20853579 - 20853625
Alignment:
Q  193 gggggccaaaactgctacagttacaaaacttagggggcagttttgta 239  Q
    ||||||||||| |||||||||||||||||||| ||| | ||||||||    
T  20853579 gggggccaaaattgctacagttacaaaacttaagggacggttttgta 20853625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 410 - 444
Target Start/End: Complemental strand, 22633011 - 22632977
Alignment:
Q  410 attctagggtgagggttcaattaagtccctcaccg 444  Q
    ||||||||||||||| |||||||||||||||||||    
T  22633011 attctagggtgagggatcaattaagtccctcaccg 22632977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 251 - 301
Target Start/End: Complemental strand, 25897043 - 25896993
Alignment:
Q  251 ggggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaa 301  Q
    ||||||||||||||||||||  |||| ||||| |||||||| |||||||||    
T  25897043 ggggccaaaatcgcaactttgaaaaagttagggggctaaaactgctattaa 25896993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 410 - 444
Target Start/End: Original strand, 26847102 - 26847136
Alignment:
Q  410 attctagggtgagggttcaattaagtccctcaccg 444  Q
    |||||||||||||||| ||||||||||||||||||    
T  26847102 attctagggtgagggtccaattaagtccctcaccg 26847136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 258 - 308
Target Start/End: Complemental strand, 27545390 - 27545340
Alignment:
Q  258 aaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagcctaaa 308  Q
    ||||||||||||| ||||| ||||  |||||||| ||||||||||||||||    
T  27545390 aaatcgcaactttggaaaagttagacggctaaaactgctattaagcctaaa 27545340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 196 - 238
Target Start/End: Original strand, 29657904 - 29657946
Alignment:
Q  196 ggccaaaactgctacagttacaaaacttagggggcagttttgt 238  Q
    ||||||||| ||||||||| ||||||||| |||||||||||||    
T  29657904 ggccaaaacggctacagttgcaaaacttaaggggcagttttgt 29657946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 406 - 444
Target Start/End: Complemental strand, 36182168 - 36182130
Alignment:
Q  406 gtgaattctagggtgagggttcaattaagtccctcaccg 444  Q
    |||||||||| || |||||||||||||||||||||||||    
T  36182168 gtgaattctatggcgagggttcaattaagtccctcaccg 36182130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 257 - 307
Target Start/End: Original strand, 41602878 - 41602928
Alignment:
Q  257 aaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagcctaa 307  Q
    |||||||||||||||  ||| ||||| |||||||| |||||||||||||||    
T  41602878 aaaatcgcaactttttgaaacttagggggctaaaactgctattaagcctaa 41602928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 410 - 444
Target Start/End: Original strand, 42094014 - 42094048
Alignment:
Q  410 attctagggtgagggttcaattaagtccctcaccg 444  Q
    ||||||||||||||| |||||||||||||||||||    
T  42094014 attctagggtgagggatcaattaagtccctcaccg 42094048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 251 - 305
Target Start/End: Original strand, 44807335 - 44807389
Alignment:
Q  251 ggggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagcct 305  Q
    ||||||||||||||||||||||||||  |||| ||  |||||||| |||||||||    
T  44807335 ggggccaaaatcgcaacttttgaaaagatagggggtcaaaagtgcaattaagcct 44807389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 256 - 310
Target Start/End: Complemental strand, 45515981 - 45515927
Alignment:
Q  256 caaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagcctaaaaa 310  Q
    |||||||||||||||  |||||||| | |||||||| ||| ||||||||||||||    
T  45515981 caaaatcgcaactttgaaaaaattaaggggctaaaactgcaattaagcctaaaaa 45515927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 256 - 309
Target Start/End: Original strand, 26919981 - 26920034
Alignment:
Q  256 caaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagcctaaaa 309  Q
    ||||||| |||||||||||||  |||| ||| |||||||| |||||||||||||    
T  26919981 caaaatcacaacttttgaaaagatagggggccaaaagtgcaattaagcctaaaa 26920034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 252 - 305
Target Start/End: Original strand, 40021775 - 40021828
Alignment:
Q  252 gggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagcct 305  Q
    ||||| |||||||||||||||||||| || ||| | |||||||| |||||||||    
T  40021775 gggcctaaatcgcaacttttgaaaaaataagagaccaaaagtgcaattaagcct 40021828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 251 - 307
Target Start/End: Complemental strand, 7658655 - 7658599
Alignment:
Q  251 ggggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagcctaa 307  Q
    |||||||||||| |||||||||||||  |||| ||  |||||||| |||||||||||    
T  7658655 ggggccaaaatcacaacttttgaaaagatagggggtcaaaagtgcaattaagcctaa 7658599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 250 - 310
Target Start/End: Original strand, 36624170 - 36624229
Alignment:
Q  250 aggggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagcctaaaaa 310  Q
    |||||||||||||||||||||||||||  |||| ||| |||| ||| ||||||||| ||||    
T  36624170 aggggccaaaatcgcaacttttgaaaagatagg-ggccaaaaatgcaattaagccttaaaa 36624229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 75)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 192 - 240
Target Start/End: Original strand, 35393868 - 35393916
Alignment:
Q  192 ggggggccaaaactgctacagttacaaaacttagggggcagttttgtag 240  Q
    |||||||||||||||||||||||||||||| |||||||| |||||||||    
T  35393868 ggggggccaaaactgctacagttacaaaacctagggggcggttttgtag 35393916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 250 - 310
Target Start/End: Original strand, 49869678 - 49869738
Alignment:
Q  250 aggggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagcctaaaaa 310  Q
    |||||||||||||||||||||||||||  |||||||  |||||||| ||||||||||||||    
T  49869678 aggggccaaaatcgcaacttttgaaaagataggaggtcaaaagtgcaattaagcctaaaaa 49869738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 251 - 308
Target Start/End: Complemental strand, 53312339 - 53312282
Alignment:
Q  251 ggggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagcctaaa 308  Q
    ||||||||||||||||||||  |||| ||||| |||||||| ||||||||||||||||    
T  53312339 ggggccaaaatcgcaactttgaaaaagttagggggctaaaaatgctattaagcctaaa 53312282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 250 - 306
Target Start/End: Original strand, 6207436 - 6207492
Alignment:
Q  250 aggggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagccta 306  Q
    ||||||||||||| ||||||| | ||||||||| |||||||| ||||||||||||||    
T  6207436 aggggccaaaatcacaactttaggaaaattagggggctaaaactgctattaagccta 6207492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 192 - 240
Target Start/End: Complemental strand, 10059798 - 10059750
Alignment:
Q  192 ggggggccaaaactgctacagttacaaaacttagggggcagttttgtag 240  Q
    ||||| ||||||||||||||||| ||||||||||||||| |||||||||    
T  10059798 gggggaccaaaactgctacagttgcaaaacttagggggcggttttgtag 10059750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 251 - 303
Target Start/End: Complemental strand, 35615367 - 35615315
Alignment:
Q  251 ggggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagc 303  Q
    |||||||||||||||||||| ||||| ||||| |||||||| |||||||||||    
T  35615367 ggggccaaaatcgcaactttagaaaagttagggggctaaaactgctattaagc 35615315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 405 - 441
Target Start/End: Original strand, 47156633 - 47156669
Alignment:
Q  405 tgtgaattctagggtgagggttcaattaagtccctca 441  Q
    |||||||||||||||||||||||||||||||||||||    
T  47156633 tgtgaattctagggtgagggttcaattaagtccctca 47156669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 193 - 240
Target Start/End: Original strand, 2181325 - 2181372
Alignment:
Q  193 gggggccaaaactgctacagttacaaaacttagggggcagttttgtag 240  Q
    |||||||||||||| ||||||| |||||||||| ||||||||||||||    
T  2181325 gggggccaaaactgttacagttgcaaaacttagagggcagttttgtag 2181372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 189 - 240
Target Start/End: Complemental strand, 14060872 - 14060821
Alignment:
Q  189 ttaggggggccaaaactgctacagttacaaaacttagggggcagttttgtag 240  Q
    ||||||||||||||||||||| |||| |||| |||||||||| |||||||||    
T  14060872 ttaggggggccaaaactgctatagttgcaaagcttagggggcggttttgtag 14060821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 194 - 303
Target Start/End: Original strand, 21957668 - 21957780
Alignment:
Q  194 ggggccaaaactgctacagttacaaaacttagggggcagttttgtagnnnnnnnnn---aggggccaaaatcgcaacttttgaaaaattaggaggctaaa 290  Q
    |||| |||||||||||||||| ||||||||||| ||| |||||||||            || |||||||||||||||||| ||||| ||||| |||||||    
T  21957668 ggggtcaaaactgctacagttgcaaaacttaggaggcggttttgtagtttttttttcttagaggccaaaatcgcaactttggaaaagttagggggctaaa 21957767  T
Q  291 agtgctattaagc 303  Q
    | |||||||||||    
T  21957768 actgctattaagc 21957780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 251 - 305
Target Start/End: Complemental strand, 1186711 - 1186657
Alignment:
Q  251 ggggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagcct 305  Q
    ||||||||||||||||||||| |||| ||||| ||| |||||||| |||||||||    
T  1186711 ggggccaaaatcgcaacttttaaaaagttagggggccaaaagtgcaattaagcct 1186657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 253 - 311
Target Start/End: Original strand, 2017051 - 2017109
Alignment:
Q  253 ggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagcctaaaaat 311  Q
    |||||||||||||||||| | ||| ||| | |||||||| |||||||||||||||||||    
T  2017051 ggccaaaatcgcaactttaggaaagttatggggctaaaactgctattaagcctaaaaat 2017109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 406 - 444
Target Start/End: Original strand, 34450816 - 34450854
Alignment:
Q  406 gtgaattctagggtgagggttcaattaagtccctcaccg 444  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  34450816 gtgaattctagggtgagggatcaattaagtccctcaccg 34450854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 192 - 310
Target Start/End: Complemental strand, 42526079 - 42525959
Alignment:
Q  192 ggggggccaaaactgctacagttacaaaacttagggggcagttttgtagnnnnnnnnn--aggggccaaaatcgcaacttttgaaaaattaggaggctaa 289  Q
    |||||||||||||| |||||||| ||||||| | ||||| |||||||||           |||||||||||| ||||||||  ||||||||||  |||||    
T  42526079 ggggggccaaaactactacagttgcaaaactaatggggcggttttgtagttttttttttaaggggccaaaattgcaactttaaaaaaattagggagctaa 42525980  T
Q  290 aagtgctattaagcctaaaaa 310  Q
    || |||||||||||| |||||    
T  42525979 aattgctattaagccaaaaaa 42525959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 406 - 444
Target Start/End: Complemental strand, 47157426 - 47157388
Alignment:
Q  406 gtgaattctagggtgagggttcaattaagtccctcaccg 444  Q
    |||||||||||||||||||||||||||| ||||||||||    
T  47157426 gtgaattctagggtgagggttcaattaaatccctcaccg 47157388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 193 - 239
Target Start/End: Complemental strand, 53924860 - 53924814
Alignment:
Q  193 gggggccaaaactgctacagttacaaaacttagggggcagttttgta 239  Q
    |||||||||||||||||||||| ||||||||||||| | ||||||||    
T  53924860 gggggccaaaactgctacagttgcaaaacttaggggacggttttgta 53924814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 196 - 302
Target Start/End: Complemental strand, 1420645 - 1420537
Alignment:
Q  196 ggccaaaactgctacagttacaaaacttagggggcagttttgtag-nnnnnnnnnagg-ggccaaaatcgcaacttttgaaaaattaggaggctaaaagt 293  Q
    ||||||||||| || |||| ||||||||||||||| |||||||||          ||| |||||||||||||||||| ||||| ||||| |||||||| |    
T  1420645 ggccaaaactgatatagttgcaaaacttagggggcggttttgtagttttttttttaggaggccaaaatcgcaactttggaaaagttagggggctaaaact 1420546  T
Q  294 gctattaag 302  Q
    |||||||||    
T  1420545 gctattaag 1420537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 252 - 305
Target Start/End: Complemental strand, 2016843 - 2016790
Alignment:
Q  252 gggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagcct 305  Q
    ||||||||||||||||||| ||||| ||||| |||||||| |||||| ||||||    
T  2016843 gggccaaaatcgcaactttggaaaagttagggggctaaaactgctatcaagcct 2016790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 251 - 304
Target Start/End: Original strand, 20112410 - 20112463
Alignment:
Q  251 ggggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagcc 304  Q
    |||||||||||||||||||| ||||| |||| ||||||||| || |||||||||    
T  20112410 ggggccaaaatcgcaactttggaaaagttagaaggctaaaactgttattaagcc 20112463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 256 - 305
Target Start/End: Original strand, 37832963 - 37833012
Alignment:
Q  256 caaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagcct 305  Q
    ||||||||||||||| | ||| |||||||||||||| |||||||||||||    
T  37832963 caaaatcgcaactttaggaaagttaggaggctaaaactgctattaagcct 37833012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 192 - 240
Target Start/End: Complemental strand, 6207291 - 6207243
Alignment:
Q  192 ggggggccaaaactgctacagttacaaaacttagggggcagttttgtag 240  Q
    |||| ||||||||||||||||||  |||||||| |||||||||||||||    
T  6207291 ggggagccaaaactgctacagttgtaaaacttatggggcagttttgtag 6207243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 410 - 442
Target Start/End: Original strand, 34941507 - 34941539
Alignment:
Q  410 attctagggtgagggttcaattaagtccctcac 442  Q
    |||||||||||||||||||||||||||||||||    
T  34941507 attctagggtgagggttcaattaagtccctcac 34941539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 192 - 240
Target Start/End: Original strand, 54855507 - 54855555
Alignment:
Q  192 ggggggccaaaactgctacagttacaaaacttagggggcagttttgtag 240  Q
    |||||||||||||| ||| ||||||||||||||||| || |||||||||    
T  54855507 ggggggccaaaacttctaaagttacaaaacttagggagcggttttgtag 54855555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 193 - 240
Target Start/End: Complemental strand, 2016905 - 2016858
Alignment:
Q  193 gggggccaaaactgctacagttacaaaacttagggggcagttttgtag 240  Q
    ||||||||||||||| |||  | |||||||||||||||||||||||||    
T  2016905 gggggccaaaactgccacatgtgcaaaacttagggggcagttttgtag 2016858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 253 - 304
Target Start/End: Original strand, 9592393 - 9592444
Alignment:
Q  253 ggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagcc 304  Q
    ||||||||||||||||||||||||  |||| ||| |||||||| ||||||||    
T  9592393 ggccaaaatcgcaacttttgaaaagatagggggccaaaagtgcaattaagcc 9592444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 251 - 310
Target Start/End: Original strand, 12893223 - 12893282
Alignment:
Q  251 ggggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagcctaaaaa 310  Q
    ||||||||||| ||||| ||||||||  |||| ||| |||||||| ||||||||||||||    
T  12893223 ggggccaaaattgcaacatttgaaaagatagggggccaaaagtgcaattaagcctaaaaa 12893282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 253 - 304
Target Start/End: Original strand, 14449548 - 14449599
Alignment:
Q  253 ggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagcc 304  Q
    |||||||||||||||||| ||||| ||||| |||||||| | ||||||||||    
T  14449548 ggccaaaatcgcaactttggaaaagttagggggctaaaactactattaagcc 14449599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 193 - 228
Target Start/End: Complemental strand, 18937354 - 18937319
Alignment:
Q  193 gggggccaaaactgctacagttacaaaacttagggg 228  Q
    |||||||||||||||||||||| |||||||||||||    
T  18937354 gggggccaaaactgctacagttgcaaaacttagggg 18937319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 250 - 305
Target Start/End: Original strand, 24296759 - 24296814
Alignment:
Q  250 aggggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagcct 305  Q
    |||||||| ||||||||||||||||||  |||||||  |||||||| |||||||||    
T  24296759 aggggccagaatcgcaacttttgaaaagataggaggtcaaaagtgcaattaagcct 24296814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 411 - 442
Target Start/End: Complemental strand, 26354274 - 26354243
Alignment:
Q  411 ttctagggtgagggttcaattaagtccctcac 442  Q
    ||||||||||||||||||||||||||||||||    
T  26354274 ttctagggtgagggttcaattaagtccctcac 26354243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 251 - 310
Target Start/End: Original strand, 44121048 - 44121107
Alignment:
Q  251 ggggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagcctaaaaa 310  Q
    |||| |||||||||||||||||||||  |||| ||| |||||||  ||||||||||||||    
T  44121048 ggggtcaaaatcgcaacttttgaaaagatagggggccaaaagtgtaattaagcctaaaaa 44121107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 189 - 240
Target Start/End: Original strand, 53312483 - 53312533
Alignment:
Q  189 ttaggggggccaaaactgctacagttacaaaacttagggggcagttttgtag 240  Q
    ||||||||||||||||||||||||||||| | |||| | |||||||||||||    
T  53312483 ttaggggggccaaaactgctacagttacagagctta-gaggcagttttgtag 53312533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 255 - 314
Target Start/End: Original strand, 53925015 - 53925074
Alignment:
Q  255 ccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagcctaaaaattaa 314  Q
    |||||||||||||||| ||||| |||||||||||||| || |||||| || ||| |||||    
T  53925015 ccaaaatcgcaactttagaaaagttaggaggctaaaattgttattaaaccaaaatattaa 53925074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 192 - 226
Target Start/End: Complemental strand, 2654069 - 2654035
Alignment:
Q  192 ggggggccaaaactgctacagttacaaaacttagg 226  Q
    ||||||||||||||||||||||| |||||||||||    
T  2654069 ggggggccaaaactgctacagttgcaaaacttagg 2654035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 251 - 309
Target Start/End: Original strand, 4796299 - 4796357
Alignment:
Q  251 ggggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagcctaaaa 309  Q
    ||||||||||| |||| ||| || || ||||| |||||||| |||||||||||||||||    
T  4796299 ggggccaaaattgcaattttggataagttagggggctaaaactgctattaagcctaaaa 4796357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 194 - 228
Target Start/End: Complemental strand, 6614958 - 6614924
Alignment:
Q  194 ggggccaaaactgctacagttacaaaacttagggg 228  Q
    ||||||||||||||||||||| |||||||||||||    
T  6614958 ggggccaaaactgctacagttgcaaaacttagggg 6614924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 252 - 306
Target Start/End: Original strand, 8965773 - 8965826
Alignment:
Q  252 gggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagccta 306  Q
    |||||||||||||||||||  |||||||||| || ||||| ||||||||||||||    
T  8965773 gggccaaaatcgcaactttgaaaaaattagg-ggttaaaattgctattaagccta 8965826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 250 - 304
Target Start/End: Original strand, 10059959 - 10060013
Alignment:
Q  250 aggggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagcc 304  Q
    |||||| ||||||||||||||  |||||||||| | |||||| ||||||||||||    
T  10059959 aggggcaaaaatcgcaactttgaaaaaattaggggtctaaaactgctattaagcc 10060013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 410 - 444
Target Start/End: Complemental strand, 14527619 - 14527585
Alignment:
Q  410 attctagggtgagggttcaattaagtccctcaccg 444  Q
    ||||||||||||||| |||||||||||||||||||    
T  14527619 attctagggtgagggatcaattaagtccctcaccg 14527585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 410 - 444
Target Start/End: Complemental strand, 18363696 - 18363662
Alignment:
Q  410 attctagggtgagggttcaattaagtccctcaccg 444  Q
    |||||||||||||||||||||||||| ||||||||    
T  18363696 attctagggtgagggttcaattaagttcctcaccg 18363662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 257 - 311
Target Start/End: Complemental strand, 21451506 - 21451452
Alignment:
Q  257 aaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagcctaaaaat 311  Q
    ||||||||||||||   ||| |||||||||||||| ||||||||||||| |||||    
T  21451506 aaaatcgcaactttgagaaagttaggaggctaaaactgctattaagccttaaaat 21451452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 410 - 444
Target Start/End: Original strand, 24666134 - 24666168
Alignment:
Q  410 attctagggtgagggttcaattaagtccctcaccg 444  Q
    ||||||||||||||| |||||||||||||||||||    
T  24666134 attctagggtgagggatcaattaagtccctcaccg 24666168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 251 - 305
Target Start/End: Complemental strand, 25909540 - 25909486
Alignment:
Q  251 ggggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagcct 305  Q
    |||||||||||| ||||||| ||||| ||||| || ||||| |||||||||||||    
T  25909540 ggggccaaaatcacaactttggaaaagttagggggttaaaactgctattaagcct 25909486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 410 - 444
Target Start/End: Original strand, 36599232 - 36599266
Alignment:
Q  410 attctagggtgagggttcaattaagtccctcaccg 444  Q
    |||||||||||||||||||||||||| ||||||||    
T  36599232 attctagggtgagggttcaattaagttcctcaccg 36599266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 251 - 301
Target Start/End: Complemental strand, 37831645 - 37831595
Alignment:
Q  251 ggggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaa 301  Q
    ||||||||||||||||||| | |||| ||||| |||||||| |||||||||    
T  37831645 ggggccaaaatcgcaacttcttaaaacttagggggctaaaactgctattaa 37831595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 410 - 444
Target Start/End: Original strand, 42792780 - 42792814
Alignment:
Q  410 attctagggtgagggttcaattaagtccctcaccg 444  Q
    |||||||||||||||| ||||||||||||||||||    
T  42792780 attctagggtgagggtccaattaagtccctcaccg 42792814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 192 - 230
Target Start/End: Complemental strand, 43074703 - 43074665
Alignment:
Q  192 ggggggccaaaactgctacagttacaaaacttagggggc 230  Q
    ||||||||||||||||||||||| ||||||||| |||||    
T  43074703 ggggggccaaaactgctacagttgcaaaacttatggggc 43074665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 250 - 304
Target Start/End: Original strand, 43074826 - 43074880
Alignment:
Q  250 aggggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagcc 304  Q
    ||||| ||||||||||||||| | ||| ||||| |||||||| ||||||||||||    
T  43074826 aggggtcaaaatcgcaactttgggaaagttagggggctaaaattgctattaagcc 43074880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 251 - 301
Target Start/End: Complemental strand, 51362589 - 51362539
Alignment:
Q  251 ggggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaa 301  Q
    |||||||||||||||||||| ||||| ||||| |||||||| | |||||||    
T  51362589 ggggccaaaatcgcaactttagaaaagttagggggctaaaactactattaa 51362539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 252 - 309
Target Start/End: Original strand, 2016690 - 2016747
Alignment:
Q  252 gggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagcctaaaa 309  Q
    ||||||||||||||||||||| |||  |||  ||| |||||||| |||||||||||||    
T  2016690 gggccaaaatcgcaacttttggaaagatagtgggcaaaaagtgcaattaagcctaaaa 2016747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 251 - 304
Target Start/End: Complemental strand, 2654006 - 2653953
Alignment:
Q  251 ggggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagcc 304  Q
    |||||||||||||||||||   |||| ||||||||| |||| ||||||||||||    
T  2654006 ggggccaaaatcgcaacttcgtaaaagttaggaggcaaaaactgctattaagcc 2653953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 195 - 240
Target Start/End: Original strand, 2837102 - 2837147
Alignment:
Q  195 gggccaaaactgctacagttacaaaacttagggggcagttttgtag 240  Q
    ||||||||||||||||| ||  |||||||||||||| |||||||||    
T  2837102 gggccaaaactgctacaattgtaaaacttagggggcggttttgtag 2837147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 195 - 240
Target Start/End: Original strand, 10059899 - 10059944
Alignment:
Q  195 gggccaaaactgctacagttacaaaacttagggggcagttttgtag 240  Q
    ||||||||||||| |||| | ||||||||||||||| |||||||||    
T  10059899 gggccaaaactgccacagatgcaaaacttagggggcggttttgtag 10059944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 195 - 240
Target Start/End: Complemental strand, 21871491 - 21871447
Alignment:
Q  195 gggccaaaactgctacagttacaaaacttagggggcagttttgtag 240  Q
    |||||||||||||||||||| ||||||||| ||| |||||||||||    
T  21871491 gggccaaaactgctacagttgcaaaactta-gggacagttttgtag 21871447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 195 - 240
Target Start/End: Complemental strand, 21927352 - 21927308
Alignment:
Q  195 gggccaaaactgctacagttacaaaacttagggggcagttttgtag 240  Q
    |||||||||||||||||||| ||||||||| ||| |||||||||||    
T  21927352 gggccaaaactgctacagttgcaaaactta-gggacagttttgtag 21927308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 257 - 314
Target Start/End: Complemental strand, 23777081 - 23777024
Alignment:
Q  257 aaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagcctaaaaattaa 314  Q
    ||||||||||||||||||||  ||  |||| |||||||| ||||||||| ||||||||    
T  23777081 aaaatcgcaacttttgaaaagataaaaggccaaaagtgcaattaagccttaaaattaa 23777024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 251 - 304
Target Start/End: Complemental strand, 36945566 - 36945513
Alignment:
Q  251 ggggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagcc 304  Q
    ||||| ||||||||||||||||||||  |||| ||| |||||||| ||||||||    
T  36945566 ggggcaaaaatcgcaacttttgaaaagatagggggccaaaagtgcaattaagcc 36945513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 407 - 444
Target Start/End: Complemental strand, 42793575 - 42793538
Alignment:
Q  407 tgaattctagggtgagggttcaattaagtccctcaccg 444  Q
    ||||||||||| ||||| ||||||||||||||||||||    
T  42793575 tgaattctaggatgaggattcaattaagtccctcaccg 42793538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 414 - 443
Target Start/End: Original strand, 51386465 - 51386494
Alignment:
Q  414 tagggtgagggttcaattaagtccctcacc 443  Q
    ||||||||||||||||||||||||||||||    
T  51386465 tagggtgagggttcaattaagtccctcacc 51386494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 255 - 304
Target Start/End: Original strand, 52463052 - 52463101
Alignment:
Q  255 ccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagcc 304  Q
    ||||||||||||||||  |||||||||| |||||||| || |||||||||    
T  52463052 ccaaaatcgcaactttgaaaaaattagggggctaaaactgttattaagcc 52463101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 251 - 307
Target Start/End: Complemental strand, 2836952 - 2836896
Alignment:
Q  251 ggggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagcctaa 307  Q
    ||||||||||||||| |||| ||||| ||||| || ||||| || ||||||||||||    
T  2836952 ggggccaaaatcgcagctttggaaaagttagggggttaaaactgttattaagcctaa 2836896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 250 - 314
Target Start/End: Original strand, 3556173 - 3556237
Alignment:
Q  250 aggggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagcctaaaaattaa 314  Q
    ||||| ||||||| |||||||||||||  |||| ||| |||| ||| |||||||| |||||||||    
T  3556173 aggggtcaaaatcacaacttttgaaaagatagggggccaaaaatgcaattaagccaaaaaattaa 3556237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 192 - 236
Target Start/End: Original strand, 3658124 - 3658168
Alignment:
Q  192 ggggggccaaaactgctacagttacaaaacttagggggcagtttt 236  Q
    |||| |||||||||||||||||| |||||||||| || |||||||    
T  3658124 ggggagccaaaactgctacagttgcaaaacttagaggacagtttt 3658168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 192 - 228
Target Start/End: Original strand, 16292467 - 16292503
Alignment:
Q  192 ggggggccaaaactgctacagttacaaaacttagggg 228  Q
    |||||||||||||| |||||||| |||||||||||||    
T  16292467 ggggggccaaaactactacagttgcaaaacttagggg 16292503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 404 - 444
Target Start/End: Original strand, 20143278 - 20143318
Alignment:
Q  404 ttgtgaattctagggtgagggttcaattaagtccctcaccg 444  Q
    ||||| ||||||||||||||| |||| ||||||||||||||    
T  20143278 ttgtggattctagggtgagggctcaactaagtccctcaccg 20143318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 192 - 228
Target Start/End: Complemental strand, 21597516 - 21597480
Alignment:
Q  192 ggggggccaaaactgctacagttacaaaacttagggg 228  Q
    |||| |||||||||||||||||| |||||||||||||    
T  21597516 ggggtgccaaaactgctacagttgcaaaacttagggg 21597480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 199 - 239
Target Start/End: Complemental strand, 34771378 - 34771338
Alignment:
Q  199 caaaactgctacagttacaaaacttagggggcagttttgta 239  Q
    |||||||||||||||| ||||||||||| | ||||||||||    
T  34771378 caaaactgctacagttgcaaaacttaggagacagttttgta 34771338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 252 - 304
Target Start/End: Complemental strand, 36413731 - 36413679
Alignment:
Q  252 gggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagcc 304  Q
    |||||||||||||||||||||||||  ||||  || |||||||| ||||||||    
T  36413731 gggccaaaatcgcaacttttgaaaagatagggtgcaaaaagtgcaattaagcc 36413679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 251 - 303
Target Start/End: Complemental strand, 40489264 - 40489212
Alignment:
Q  251 ggggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagc 303  Q
    |||||||||||||||||||||  |||  |||| |||||||||||| |||||||    
T  40489264 ggggccaaaatcgcaacttttagaaagatagggggctaaaagtgcaattaagc 40489212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 250 - 306
Target Start/End: Complemental strand, 41465465 - 41465409
Alignment:
Q  250 aggggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagccta 306  Q
    ||||||||||||| ||||||| ||||| ||||||| | |||||||  ||||||||||    
T  41465465 aggggccaaaatcacaactttggaaaacttaggagaccaaaagtgtaattaagccta 41465409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 250 - 302
Target Start/End: Original strand, 45904203 - 45904255
Alignment:
Q  250 aggggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaag 302  Q
    |||||||||||| ||||||||||||||  |||||||  |||||||| ||||||    
T  45904203 aggggccaaaattgcaacttttgaaaagataggaggtcaaaagtgcaattaag 45904255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 192 - 240
Target Start/End: Original strand, 49185758 - 49185806
Alignment:
Q  192 ggggggccaaaactgctacagttacaaaacttagggggcagttttgtag 240  Q
    |||||||||||||| | |||||| ||||||||| ||||| |||||||||    
T  49185758 ggggggccaaaactacaacagttgcaaaacttaaggggcggttttgtag 49185806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 253 - 305
Target Start/End: Complemental strand, 49869304 - 49869252
Alignment:
Q  253 ggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagcct 305  Q
    ||||||||||||||||||||||||  ||||  || |||||||| |||||||||    
T  49869304 ggccaaaatcgcaacttttgaaaagatagggagccaaaagtgcaattaagcct 49869252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 193 - 225
Target Start/End: Original strand, 50769563 - 50769595
Alignment:
Q  193 gggggccaaaactgctacagttacaaaacttag 225  Q
    |||||||||||||||||||||| ||||||||||    
T  50769563 gggggccaaaactgctacagttgcaaaacttag 50769595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 410 - 442
Target Start/End: Original strand, 52129426 - 52129458
Alignment:
Q  410 attctagggtgagggttcaattaagtccctcac 442  Q
    |||||| ||||||||||||||||||||||||||    
T  52129426 attctaaggtgagggttcaattaagtccctcac 52129458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 52)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 254 - 310
Target Start/End: Complemental strand, 35544795 - 35544739
Alignment:
Q  254 gccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagcctaaaaa 310  Q
    |||||||||||||||||||||||  |||| |||||||||||| ||||||||||||||    
T  35544795 gccaaaatcgcaacttttgaaaagatagggggctaaaagtgcgattaagcctaaaaa 35544739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 192 - 239
Target Start/End: Original strand, 45739135 - 45739182
Alignment:
Q  192 ggggggccaaaactgctacagttacaaaacttagggggcagttttgta 239  Q
    ||||||||||||||||||||||| ||||||||| ||||||||||||||    
T  45739135 ggggggccaaaactgctacagttgcaaaacttatggggcagttttgta 45739182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 251 - 305
Target Start/End: Complemental strand, 3377554 - 3377500
Alignment:
Q  251 ggggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagcct 305  Q
    |||||||||||||||||||| ||||| ||||| |||||||| |||||||||||||    
T  3377554 ggggccaaaatcgcaactttggaaaagttagggggctaaaactgctattaagcct 3377500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 253 - 307
Target Start/End: Original strand, 35580931 - 35580985
Alignment:
Q  253 ggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagcctaa 307  Q
    ||||||||||||||||||||||||| |||| ||| |||||||| |||||||||||    
T  35580931 ggccaaaatcgcaacttttgaaaaaatagggggccaaaagtgcaattaagcctaa 35580985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 192 - 240
Target Start/End: Complemental strand, 23891774 - 23891726
Alignment:
Q  192 ggggggccaaaactgctacagttacaaaacttagggggcagttttgtag 240  Q
    ||||||||||||||||||||||| ||||||||| ||||| |||||||||    
T  23891774 ggggggccaaaactgctacagttgcaaaacttaaggggcggttttgtag 23891726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 192 - 240
Target Start/End: Original strand, 46573026 - 46573074
Alignment:
Q  192 ggggggccaaaactgctacagttacaaaacttagggggcagttttgtag 240  Q
    ||||| ||||||||||||||||| |||||||||||||||||| ||||||    
T  46573026 gggggaccaaaactgctacagttgcaaaacttagggggcagtgttgtag 46573074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 255 - 310
Target Start/End: Original strand, 13344440 - 13344495
Alignment:
Q  255 ccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagcctaaaaa 310  Q
    ||||||||||||||||||||||| |||| ||| |||||||| ||||| ||||||||    
T  13344440 ccaaaatcgcaacttttgaaaaaatagggggccaaaagtgcaattaaacctaaaaa 13344495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 251 - 310
Target Start/End: Original strand, 15911963 - 15912022
Alignment:
Q  251 ggggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagcctaaaaa 310  Q
    ||||||||||||||||||||||||||| |||| ||  |||||||| |||||||| |||||    
T  15911963 ggggccaaaatcgcaacttttgaaaaaatagggggtcaaaagtgcaattaagccaaaaaa 15912022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 255 - 301
Target Start/End: Original strand, 12961109 - 12961155
Alignment:
Q  255 ccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaa 301  Q
    ||||||||||||||||  ||||||||||||||||||| |||||||||    
T  12961109 ccaaaatcgcaactttgaaaaaattaggaggctaaaactgctattaa 12961155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 194 - 304
Target Start/End: Complemental strand, 14978909 - 14978797
Alignment:
Q  194 ggggccaaaactgctacagttacaaaacttagggggcagttttgtagnnnnnnnnn--aggggccaaaatcgcaacttttgaaaaattaggaggctaaaa 291  Q
    |||||||||||| | |||| | |||||||||||||||||||||||||           |||  |||||||||||||||| ||||| ||||| ||||||||    
T  14978909 ggggccaaaactaccacaggtgcaaaacttagggggcagttttgtagtttttttttgaaggacccaaaatcgcaactttggaaaagttagggggctaaaa 14978810  T
Q  292 gtgctattaagcc 304  Q
     ||||||||||||    
T  14978809 ctgctattaagcc 14978797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 410 - 444
Target Start/End: Original strand, 16449560 - 16449594
Alignment:
Q  410 attctagggtgagggttcaattaagtccctcaccg 444  Q
    |||||||||||||||||||||||||||||||||||    
T  16449560 attctagggtgagggttcaattaagtccctcaccg 16449594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 410 - 444
Target Start/End: Original strand, 16459134 - 16459168
Alignment:
Q  410 attctagggtgagggttcaattaagtccctcaccg 444  Q
    |||||||||||||||||||||||||||||||||||    
T  16459134 attctagggtgagggttcaattaagtccctcaccg 16459168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 410 - 444
Target Start/End: Complemental strand, 26240914 - 26240880
Alignment:
Q  410 attctagggtgagggttcaattaagtccctcaccg 444  Q
    |||||||||||||||||||||||||||||||||||    
T  26240914 attctagggtgagggttcaattaagtccctcaccg 26240880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 255 - 305
Target Start/End: Original strand, 30849494 - 30849544
Alignment:
Q  255 ccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagcct 305  Q
    ||||||||||||||||  |||||||||||| |||||| |||||||||||||    
T  30849494 ccaaaatcgcaactttaaaaaaattaggagactaaaactgctattaagcct 30849544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 252 - 309
Target Start/End: Original strand, 7764442 - 7764499
Alignment:
Q  252 gggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagcctaaaa 309  Q
    |||||||||| ||||||||||||||  |||| ||| |||||||| |||||||||||||    
T  7764442 gggccaaaattgcaacttttgaaaagatagggggccaaaagtgcaattaagcctaaaa 7764499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 251 - 304
Target Start/End: Original strand, 21932048 - 21932101
Alignment:
Q  251 ggggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagcc 304  Q
    ||||||||||||||||||||||||||  |||| ||| |||||||| ||||||||    
T  21932048 ggggccaaaatcgcaacttttgaaaagatagggggcaaaaagtgcaattaagcc 21932101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 192 - 240
Target Start/End: Complemental strand, 12960960 - 12960912
Alignment:
Q  192 ggggggccaaaactgctacagttacaaaacttagggggcagttttgtag 240  Q
    |||||||||||||||||| |||| ||||||||||| ||| |||||||||    
T  12960960 ggggggccaaaactgctatagttgcaaaacttaggaggcggttttgtag 12960912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 192 - 240
Target Start/End: Original strand, 17760889 - 17760937
Alignment:
Q  192 ggggggccaaaactgctacagttacaaaacttagggggcagttttgtag 240  Q
    |||||||||||||||||||| || ||||||||| ||||| |||||||||    
T  17760889 ggggggccaaaactgctacaattgcaaaacttaaggggcggttttgtag 17760937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 192 - 240
Target Start/End: Original strand, 23220761 - 23220809
Alignment:
Q  192 ggggggccaaaactgctacagttacaaaacttagggggcagttttgtag 240  Q
    ||||| |||||||||||||||||  |||||||||||||| |||||||||    
T  23220761 gggggaccaaaactgctacagttgtaaaacttagggggcggttttgtag 23220809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 195 - 298
Target Start/End: Original strand, 25085595 - 25085698
Alignment:
Q  195 gggccaaaactgctacagttacaaaacttagggggcagttttgtagnnnnnnnnnaggggccaaaatcgcaacttttgaaaaattaggaggctaaaagtg 294  Q
    ||||||||||||| |||| |||||||||| ||| || | |||||||         ||||||||||||| ||||||| ||||| ||||| |||||||| ||    
T  25085595 gggccaaaactgccacaggtacaaaacttggggtgcggatttgtagttttttcttaggggccaaaatcacaactttggaaaagttagggggctaaaattg 25085694  T
Q  295 ctat 298  Q
    ||||    
T  25085695 ctat 25085698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 192 - 240
Target Start/End: Complemental strand, 39642315 - 39642267
Alignment:
Q  192 ggggggccaaaactgctacagttacaaaacttagggggcagttttgtag 240  Q
    |||||||||||||||||||| || || |||||||||||| |||||||||    
T  39642315 ggggggccaaaactgctacaattgcagaacttagggggcggttttgtag 39642267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 192 - 240
Target Start/End: Complemental strand, 50226507 - 50226459
Alignment:
Q  192 ggggggccaaaactgctacagttacaaaacttagggggcagttttgtag 240  Q
    |||||||||||||||||| |||| | ||||||||||||| |||||||||    
T  50226507 ggggggccaaaactgctatagttccgaaacttagggggcggttttgtag 50226459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 192 - 239
Target Start/End: Original strand, 1096648 - 1096695
Alignment:
Q  192 ggggggccaaaactgctacagttacaaaacttagggggcagttttgta 239  Q
    ||||||||||||||||||||||| |||| |||||||| | ||||||||    
T  1096648 ggggggccaaaactgctacagttgcaaagcttaggggacggttttgta 1096695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 193 - 240
Target Start/End: Complemental strand, 15659094 - 15659047
Alignment:
Q  193 gggggccaaaactgctacagttacaaaacttagggggcagttttgtag 240  Q
    |||||||||||||||| ||||| ||||||||||||||| ||| |||||    
T  15659094 gggggccaaaactgctccagttgcaaaacttagggggcggttgtgtag 15659047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 193 - 240
Target Start/End: Complemental strand, 41997753 - 41997706
Alignment:
Q  193 gggggccaaaactgctacagttacaaaacttagggggcagttttgtag 240  Q
    |||||||||||||||||||||| ||||||||| | ||| |||||||||    
T  41997753 gggggccaaaactgctacagttgcaaaacttatgaggcggttttgtag 41997706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 251 - 310
Target Start/End: Complemental strand, 46038953 - 46038894
Alignment:
Q  251 ggggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagcctaaaaa 310  Q
    ||||||||||||| ||||||||||||  |||| ||| |||||||| ||||| ||||||||    
T  46038953 ggggccaaaatcgtaacttttgaaaagatagggggccaaaagtgcaattaaacctaaaaa 46038894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 250 - 301
Target Start/End: Complemental strand, 46572881 - 46572830
Alignment:
Q  250 aggggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaa 301  Q
    |||||||||||| |||| ||| | |||||||||||||||||| |||||||||    
T  46572881 aggggccaaaattgcaattttgggaaaattaggaggctaaaactgctattaa 46572830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 48319609 - 48319652
Alignment:
Q  196 ggccaaaactgctacagttacaaaacttagggggcagttttgta 239  Q
    ||||||||||||||||||| ||||||||||||||| | ||||||    
T  48319609 ggccaaaactgctacagttgcaaaacttagggggcggctttgta 48319652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 410 - 444
Target Start/End: Original strand, 2260858 - 2260892
Alignment:
Q  410 attctagggtgagggttcaattaagtccctcaccg 444  Q
    ||||||||||||||||||||| |||||||||||||    
T  2260858 attctagggtgagggttcaatcaagtccctcaccg 2260892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 410 - 444
Target Start/End: Complemental strand, 14166950 - 14166916
Alignment:
Q  410 attctagggtgagggttcaattaagtccctcaccg 444  Q
    ||||||||||||||| |||||||||||||||||||    
T  14166950 attctagggtgagggctcaattaagtccctcaccg 14166916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 251 - 305
Target Start/End: Complemental strand, 15911725 - 15911671
Alignment:
Q  251 ggggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagcct 305  Q
    ||||| ||||||||||||||||||||  |||| ||| |||||||| |||||||||    
T  15911725 ggggcaaaaatcgcaacttttgaaaagatagggggccaaaagtgcaattaagcct 15911671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 410 - 444
Target Start/End: Original strand, 24847788 - 24847822
Alignment:
Q  410 attctagggtgagggttcaattaagtccctcaccg 444  Q
    |||||||||||||||||| ||||||||||||||||    
T  24847788 attctagggtgagggttctattaagtccctcaccg 24847822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 410 - 444
Target Start/End: Complemental strand, 24848469 - 24848435
Alignment:
Q  410 attctagggtgagggttcaattaagtccctcaccg 444  Q
    |||||||||||||||||| ||||||||||||||||    
T  24848469 attctagggtgagggttctattaagtccctcaccg 24848435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 410 - 444
Target Start/End: Original strand, 26240119 - 26240153
Alignment:
Q  410 attctagggtgagggttcaattaagtccctcaccg 444  Q
    ||||||||||||||| |||||||||||||||||||    
T  26240119 attctagggtgagggatcaattaagtccctcaccg 26240153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 410 - 444
Target Start/End: Original strand, 27745561 - 27745595
Alignment:
Q  410 attctagggtgagggttcaattaagtccctcaccg 444  Q
    |||||| ||||||||||||||||||||||||||||    
T  27745561 attctaaggtgagggttcaattaagtccctcaccg 27745595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 199 - 240
Target Start/End: Complemental strand, 27864280 - 27864238
Alignment:
Q  199 caaaactgctacagttacaaaacttag-ggggcagttttgtag 240  Q
    |||||||||||||||| |||||||||| |||||||||||||||    
T  27864280 caaaactgctacagttgcaaaacttagaggggcagttttgtag 27864238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 251 - 305
Target Start/End: Complemental strand, 35580791 - 35580737
Alignment:
Q  251 ggggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagcct 305  Q
    |||||||||||||||||||||| |||  |||| ||| |||||||| |||||||||    
T  35580791 ggggccaaaatcgcaacttttggaaagatagggggccaaaagtgcaattaagcct 35580737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 251 - 301
Target Start/End: Complemental strand, 41611294 - 41611244
Alignment:
Q  251 ggggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaa 301  Q
    |||||||||||||||||||||| |||| |||| ||| |||||||| |||||    
T  41611294 ggggccaaaatcgcaacttttggaaaaatagggggccaaaagtgcaattaa 41611244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 251 - 305
Target Start/End: Complemental strand, 51250538 - 51250484
Alignment:
Q  251 ggggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagcct 305  Q
    ||||||||||||||||||||  |||| ||||| |||||||| || ||||||||||    
T  51250538 ggggccaaaatcgcaactttgaaaaagttagggggctaaaactgttattaagcct 51250484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 251 - 305
Target Start/End: Complemental strand, 52201418 - 52201365
Alignment:
Q  251 ggggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagcct 305  Q
    ||||||||||||||||||||||||||  |||| ||| |||||||| |||||||||    
T  52201418 ggggccaaaatcgcaacttttgaaaagatagg-ggccaaaagtgcaattaagcct 52201365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 252 - 305
Target Start/End: Complemental strand, 1712422 - 1712369
Alignment:
Q  252 gggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagcct 305  Q
    |||||||||||||||||||||||||  |||| ||  |||||||| |||||||||    
T  1712422 gggccaaaatcgcaacttttgaaaagatagggggtcaaaagtgcaattaagcct 1712369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 406 - 443
Target Start/End: Complemental strand, 2261590 - 2261553
Alignment:
Q  406 gtgaattctagggtgagggttcaattaagtccctcacc 443  Q
    ||||||| ||||||||||||||||||||| ||||||||    
T  2261590 gtgaattttagggtgagggttcaattaagcccctcacc 2261553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 195 - 240
Target Start/End: Original strand, 3377714 - 3377759
Alignment:
Q  195 gggccaaaactgctacagttacaaaacttagggggcagttttgtag 240  Q
    ||||||||||||||| |||| ||||||||||||| | |||||||||    
T  3377714 gggccaaaactgctaaagttgcaaaacttaggggacggttttgtag 3377759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 251 - 304
Target Start/End: Original strand, 3377772 - 3377825
Alignment:
Q  251 ggggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagcc 304  Q
    |||||||||||| ||||||| | ||| ||||| |||||||| ||||||||||||    
T  3377772 ggggccaaaatcacaactttgggaaagttagggggctaaaactgctattaagcc 3377825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 253 - 306
Target Start/End: Complemental strand, 26811504 - 26811451
Alignment:
Q  253 ggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagccta 306  Q
    ||||||||||||||||||||||||  |||| ||  |||||||| ||||||||||    
T  26811504 ggccaaaatcgcaacttttgaaaagatagggggtcaaaagtgcaattaagccta 26811451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 410 - 443
Target Start/End: Complemental strand, 27746201 - 27746168
Alignment:
Q  410 attctagggtgagggttcaattaagtccctcacc 443  Q
    ||||||| ||||||||||||||||||||||||||    
T  27746201 attctagcgtgagggttcaattaagtccctcacc 27746168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 253 - 306
Target Start/End: Original strand, 37696541 - 37696594
Alignment:
Q  253 ggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagccta 306  Q
    ||||||||| ||||||||||||||  |||| ||| |||||||| ||||||||||    
T  37696541 ggccaaaattgcaacttttgaaaatatagggggccaaaagtgcgattaagccta 37696594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 253 - 310
Target Start/End: Complemental strand, 50591608 - 50591551
Alignment:
Q  253 ggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagcctaaaaa 310  Q
    |||||||||||||||||||| |||  || | ||| |||||||| ||||||||||||||    
T  50591608 ggccaaaatcgcaacttttggaaagataaggggccaaaagtgcaattaagcctaaaaa 50591551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 250 - 310
Target Start/End: Complemental strand, 25085453 - 25085393
Alignment:
Q  250 aggggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagcctaaaaa 310  Q
    ||||| |||||||||||||||   ||| ||||| ||| |||| ||||||||||||||||||    
T  25085453 aggggtcaaaatcgcaactttatgaaagttagggggcgaaaactgctattaagcctaaaaa 25085393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 251 - 307
Target Start/End: Original strand, 27864418 - 27864474
Alignment:
Q  251 ggggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagcctaa 307  Q
    ||||||||||| |||||||| ||||| |||||  ||||||| |||| ||||||||||    
T  27864418 ggggccaaaattgcaactttggaaaagttagggagctaaaactgctgttaagcctaa 27864474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 251 - 307
Target Start/End: Complemental strand, 41997693 - 41997637
Alignment:
Q  251 ggggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagcctaa 307  Q
    ||||||||||||||||||||   ||||||||| ||| |||| ||||||||| |||||    
T  41997693 ggggccaaaatcgcaactttgtgaaaattagggggcaaaaattgctattaaacctaa 41997637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 252 - 304
Target Start/End: Original strand, 46039143 - 46039195
Alignment:
Q  252 gggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagcc 304  Q
    |||||||||||||||||||| ||||  |||| ||| |||||||| ||||||||    
T  46039143 gggccaaaatcgcaacttttaaaaagatagggggccaaaagtgcaattaagcc 46039195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 193 - 240
Target Start/End: Complemental strand, 46190 - 46143
Alignment:
Q  193 gggggccaaaactgctacagttacaaaacttagggggcagttttgtag 240  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||||    
T  46190 gggggccaaaactgctacagttgcaaaacttagggggcggttttgtag 46143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0515 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0515
Description:

Target: scaffold0515; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 251 - 306
Target Start/End: Complemental strand, 3692 - 3637
Alignment:
Q  251 ggggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagccta 306  Q
    |||||||||||||||||||| | ||| ||||| |||||||| ||||||||||||||    
T  3692 ggggccaaaatcgcaactttgggaaagttagggggctaaaactgctattaagccta 3637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 251 - 306
Target Start/End: Complemental strand, 3692 - 3637
Alignment:
Q  251 ggggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagccta 306  Q
    |||||||||||||||||||| | ||| ||||| |||||||| ||||||||||||||    
T  3692 ggggccaaaatcgcaactttgggaaagttagggggctaaaactgctattaagccta 3637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0627 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0627
Description:

Target: scaffold0627; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 411 - 444
Target Start/End: Original strand, 6470 - 6503
Alignment:
Q  411 ttctagggtgagggttcaattaagtccctcaccg 444  Q
    ||||||||||||||||||||||||||||||||||    
T  6470 ttctagggtgagggttcaattaagtccctcaccg 6503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 199 - 240
Target Start/End: Original strand, 4220 - 4261
Alignment:
Q  199 caaaactgctacagttacaaaacttagggggcagttttgtag 240  Q
    |||||||||||||||| ||||||||||||||| |||||||||    
T  4220 caaaactgctacagttgcaaaacttagggggcggttttgtag 4261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0809
Description:

Target: scaffold0809; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 192 - 240
Target Start/End: Complemental strand, 2867 - 2819
Alignment:
Q  192 ggggggccaaaactgctacagttacaaaacttagggggcagttttgtag 240  Q
    |||| ||||||||||||||||||  |||| |||||||||||||||||||    
T  2867 ggggagccaaaactgctacagttgtaaaatttagggggcagttttgtag 2819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 193 - 240
Target Start/End: Original strand, 145555 - 145602
Alignment:
Q  193 gggggccaaaactgctacagttacaaaacttagggggcagttttgtag 240  Q
    ||||| ||||||||||||| || |||||||||||| ||||||||||||    
T  145555 gggggacaaaactgctacaattgcaaaacttagggagcagttttgtag 145602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2010 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold2010
Description:

Target: scaffold2010; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 251 - 305
Target Start/End: Complemental strand, 546 - 492
Alignment:
Q  251 ggggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagcct 305  Q
    ||||||||||||||||||||||||||  |||| ||  |||||||| |||||||||    
T  546 ggggccaaaatcgcaacttttgaaaagatagggggtcaaaagtgcaattaagcct 492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 192 - 230
Target Start/End: Original strand, 9535 - 9573
Alignment:
Q  192 ggggggccaaaactgctacagttacaaaacttagggggc 230  Q
    ||||||| ||||||||||||||| |||||||||||||||    
T  9535 ggggggctaaaactgctacagttgcaaaacttagggggc 9573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0372 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0372
Description:

Target: scaffold0372; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 257 - 311
Target Start/End: Complemental strand, 171 - 117
Alignment:
Q  257 aaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagcctaaaaat 311  Q
    ||||||||||||||   ||| |||||||||||||| ||||||||||||| |||||    
T  171 aaaatcgcaactttgagaaagttaggaggctaaaactgctattaagccttaaaat 117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0279 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0279
Description:

Target: scaffold0279; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 251 - 305
Target Start/End: Original strand, 7175 - 7229
Alignment:
Q  251 ggggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagcct 305  Q
    ||||||||||||||||||||||||||  || | ||| |||||||| |||||||||    
T  7175 ggggccaaaatcgcaacttttgaaaagatatggggccaaaagtgcaattaagcct 7229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 195 - 240
Target Start/End: Original strand, 94004 - 94049
Alignment:
Q  195 gggccaaaactgctacagttacaaaacttagggggcagttttgtag 240  Q
    ||||| |||||||||||||||||||||||| ||| | |||||||||    
T  94004 gggcctaaactgctacagttacaaaacttatgggacggttttgtag 94049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0854 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0854
Description:

Target: scaffold0854; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 251 - 303
Target Start/End: Original strand, 3388 - 3440
Alignment:
Q  251 ggggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagc 303  Q
    ||||||||||||||||||| | ||||  |||||||| |||||||| |||||||    
T  3388 ggggccaaaatcgcaacttcttaaaacataggaggccaaaagtgcaattaagc 3440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0725 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0725
Description:

Target: scaffold0725; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 257 - 309
Target Start/End: Original strand, 6698 - 6750
Alignment:
Q  257 aaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagcctaaaa 309  Q
    ||||||||||||| |  ||| ||||| |||||||| |||||||||||||||||    
T  6698 aaaatcgcaacttgttgaaacttagggggctaaaactgctattaagcctaaaa 6750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0236 (Bit Score: 29; Significance: 0.0000007; HSPs: 2)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 251 - 307
Target Start/End: Complemental strand, 22870 - 22814
Alignment:
Q  251 ggggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagcctaa 307  Q
    |||||||||||||||||||||| |||  || | ||| |||||||| |||||||||||    
T  22870 ggggccaaaatcgcaacttttggaaagataaggggccaaaagtgcaattaagcctaa 22814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0236; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 250 - 310
Target Start/End: Original strand, 23107 - 23167
Alignment:
Q  250 aggggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagcctaaaaa 310  Q
    |||||||||||||||||||||||||||  |||  | | |||||||| |||||||| |||||    
T  23107 aggggccaaaatcgcaacttttgaaaagatagaggaccaaaagtgcaattaagccaaaaaa 23167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 253 - 305
Target Start/End: Original strand, 122592 - 122644
Alignment:
Q  253 ggccaaaatcgcaacttttgaaaaattaggaggctaaaagtgctattaagcct 305  Q
    |||||||||||||||||||| |||  |||| ||| |||||||| |||||||||    
T  122592 ggccaaaatcgcaacttttggaaagatagggggccaaaagtgcaattaagcct 122644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University