View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1310_low_26 (Length: 312)

Name: NF1310_low_26
Description: NF1310
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1310_low_26
NF1310_low_26
[»] chr7 (48 HSPs)
chr7 (30-295)||(24513629-24513893)
chr7 (199-293)||(20335813-20335907)
chr7 (199-277)||(23301600-23301678)
chr7 (197-277)||(18363694-18363774)
chr7 (199-277)||(2446308-2446386)
chr7 (198-295)||(15137552-15137649)
chr7 (199-295)||(17040992-17041088)
chr7 (198-277)||(22760862-22760941)
chr7 (198-274)||(48771937-48772013)
chr7 (198-277)||(26459408-26459487)
chr7 (199-277)||(23552118-23552196)
chr7 (199-277)||(43215184-43215262)
chr7 (199-292)||(25590611-25590704)
chr7 (204-265)||(41519274-41519335)
chr7 (200-256)||(2495855-2495911)
chr7 (220-276)||(8108602-8108658)
chr7 (199-295)||(18056755-18056851)
chr7 (203-255)||(23595733-23595785)
chr7 (202-295)||(15905654-15905746)
chr7 (197-265)||(18011359-18011428)
chr7 (198-255)||(25021355-25021412)
chr7 (199-276)||(39499718-39499795)
chr7 (238-291)||(42711997-42712050)
chr7 (205-277)||(21877814-21877886)
chr7 (201-277)||(29385741-29385817)
chr7 (197-277)||(39631842-39631922)
chr7 (198-290)||(43590906-43590998)
chr7 (206-261)||(33362639-33362694)
chr7 (197-292)||(33869428-33869523)
chr7 (202-277)||(37162348-37162423)
chr7 (199-274)||(45709709-45709784)
chr7 (202-261)||(45976937-45976996)
chr7 (229-275)||(5934151-5934197)
chr7 (238-308)||(7721408-7721478)
chr7 (201-255)||(21854550-21854604)
chr7 (199-277)||(25655226-25655304)
chr7 (229-291)||(37117138-37117200)
chr7 (197-255)||(42836021-42836079)
chr7 (202-308)||(43663062-43663168)
chr7 (198-295)||(5579214-5579311)
chr7 (199-276)||(23735226-23735303)
chr7 (206-255)||(36803647-36803696)
chr7 (220-277)||(37085547-37085604)
chr7 (239-291)||(7309396-7309447)
chr7 (199-295)||(11720940-11721036)
chr7 (200-264)||(22927477-22927541)
chr7 (199-255)||(26526290-26526346)
chr7 (198-261)||(36188854-36188918)
[»] chr2 (49 HSPs)
chr2 (199-291)||(19016031-19016123)
chr2 (198-303)||(28846690-28846795)
chr2 (195-276)||(4438978-4439059)
chr2 (199-276)||(29197375-29197452)
chr2 (197-289)||(12994363-12994454)
chr2 (203-274)||(3001383-3001454)
chr2 (197-252)||(5147702-5147757)
chr2 (203-277)||(38551772-38551846)
chr2 (199-275)||(34041588-34041664)
chr2 (199-295)||(42327375-42327471)
chr2 (199-295)||(42602554-42602650)
chr2 (197-292)||(11062358-11062453)
chr2 (199-282)||(39714992-39715075)
chr2 (198-277)||(40416388-40416467)
chr2 (199-277)||(1729816-1729894)
chr2 (199-277)||(19244109-19244187)
chr2 (199-277)||(35710391-35710469)
chr2 (199-277)||(45026743-45026821)
chr2 (208-273)||(5952169-5952234)
chr2 (198-291)||(24191837-24191930)
chr2 (199-291)||(7799019-7799111)
chr2 (199-291)||(11251087-11251179)
chr2 (207-291)||(21213777-21213861)
chr2 (199-291)||(29503271-29503362)
chr2 (199-255)||(35916086-35916142)
chr2 (196-275)||(42860345-42860424)
chr2 (199-289)||(18259730-18259820)
chr2 (199-277)||(26545840-26545918)
chr2 (197-274)||(13803493-13803570)
chr2 (200-277)||(16918576-16918653)
chr2 (199-292)||(19322768-19322861)
chr2 (198-295)||(23052503-23052600)
chr2 (199-295)||(1435064-1435159)
chr2 (199-295)||(37480075-37480171)
chr2 (244-291)||(8162049-8162096)
chr2 (200-255)||(23465941-23465996)
chr2 (241-308)||(33582015-33582082)
chr2 (220-295)||(42222902-42222977)
chr2 (202-264)||(7667480-7667542)
chr2 (199-265)||(14500277-14500343)
chr2 (199-293)||(21195658-21195752)
chr2 (206-276)||(34310758-34310828)
chr2 (202-291)||(7415998-7416087)
chr2 (206-291)||(17737608-17737692)
chr2 (206-255)||(41202257-41202306)
chr2 (206-277)||(13519050-13519122)
chr2 (219-295)||(18372282-18372358)
chr2 (199-235)||(36317431-36317467)
chr2 (199-255)||(42922414-42922470)
[»] chr5 (32 HSPs)
chr5 (199-295)||(30883178-30883274)
chr5 (198-274)||(8278276-8278352)
chr5 (198-277)||(14495803-14495882)
chr5 (198-277)||(29075780-29075859)
chr5 (199-277)||(16773807-16773885)
chr5 (198-292)||(25627056-25627150)
chr5 (199-292)||(87407-87499)
chr5 (195-291)||(17028248-17028344)
chr5 (206-265)||(1410669-1410728)
chr5 (203-265)||(43241692-43241754)
chr5 (199-292)||(21549120-21549213)
chr5 (203-256)||(24652872-24652925)
chr5 (199-291)||(22020846-22020938)
chr5 (199-275)||(30109308-30109384)
chr5 (198-245)||(3252319-3252366)
chr5 (199-254)||(22737082-22737137)
chr5 (199-277)||(34984806-34984884)
chr5 (198-263)||(6844728-6844793)
chr5 (238-291)||(12883879-12883932)
chr5 (203-292)||(16436622-16436709)
chr5 (198-255)||(41797832-41797889)
chr5 (199-295)||(29692366-29692462)
chr5 (220-303)||(19949588-19949670)
chr5 (199-277)||(36958120-36958198)
chr5 (199-265)||(40461623-40461689)
chr5 (223-264)||(9842857-9842898)
chr5 (199-292)||(16457810-16457903)
chr5 (199-292)||(26078034-26078127)
chr5 (220-293)||(43442217-43442290)
chr5 (198-250)||(636596-636648)
chr5 (197-261)||(40281106-40281170)
chr5 (214-246)||(42346727-42346759)
[»] chr4 (52 HSPs)
chr4 (199-308)||(21660111-21660220)
chr4 (199-308)||(21668875-21668984)
chr4 (199-291)||(39509070-39509162)
chr4 (198-295)||(9936941-9937038)
chr4 (202-289)||(52254390-52254477)
chr4 (203-265)||(13901746-13901808)
chr4 (203-277)||(43623442-43623516)
chr4 (198-295)||(5795389-5795486)
chr4 (198-295)||(19238557-19238654)
chr4 (198-265)||(31759668-31759735)
chr4 (198-277)||(37109349-37109428)
chr4 (224-295)||(51954139-51954210)
chr4 (197-295)||(28635694-28635792)
chr4 (197-295)||(31826607-31826705)
chr4 (197-291)||(47044715-47044808)
chr4 (204-265)||(33755968-33756029)
chr4 (206-295)||(49576874-49576963)
chr4 (202-250)||(3350480-3350528)
chr4 (199-295)||(8030184-8030280)
chr4 (197-293)||(8306483-8306579)
chr4 (199-291)||(51948480-51948572)
chr4 (220-291)||(13015448-13015519)
chr4 (202-293)||(25869559-25869650)
chr4 (199-277)||(4249177-4249255)
chr4 (202-292)||(7292781-7292871)
chr4 (206-292)||(15729490-15729575)
chr4 (202-276)||(41346962-41347036)
chr4 (197-255)||(46545709-46545767)
chr4 (220-269)||(17618302-17618351)
chr4 (203-276)||(18469501-18469574)
chr4 (206-295)||(23284238-23284327)
chr4 (203-251)||(11418224-11418272)
chr4 (199-295)||(51250502-51250598)
chr4 (202-250)||(51346483-51346531)
chr4 (199-295)||(55427180-55427276)
chr4 (199-277)||(27965501-27965586)
chr4 (198-253)||(56236937-56236992)
chr4 (197-263)||(9241037-9241103)
chr4 (199-277)||(12798684-12798762)
chr4 (199-277)||(20608922-20609000)
chr4 (199-265)||(24827825-24827891)
chr4 (213-291)||(30938203-30938281)
chr4 (198-295)||(8325359-8325456)
chr4 (224-277)||(21404819-21404872)
chr4 (222-263)||(24124067-24124108)
chr4 (198-295)||(46295096-46295193)
chr4 (199-291)||(7949438-7949530)
chr4 (205-277)||(13215091-13215163)
chr4 (198-294)||(20216110-20216206)
chr4 (199-291)||(21344817-21344908)
chr4 (240-292)||(32992653-32992705)
chr4 (210-274)||(44491393-44491457)
[»] chr1 (67 HSPs)
chr1 (199-308)||(25297772-25297881)
chr1 (203-291)||(24047086-24047174)
chr1 (199-295)||(51814494-51814590)
chr1 (199-295)||(12259260-12259356)
chr1 (198-292)||(16893393-16893487)
chr1 (238-291)||(17439956-17440009)
chr1 (202-263)||(26232398-26232459)
chr1 (199-295)||(40257399-40257495)
chr1 (200-277)||(18459229-18459307)
chr1 (198-295)||(44961764-44961861)
chr1 (202-277)||(15786318-15786393)
chr1 (199-277)||(8904414-8904492)
chr1 (198-276)||(11438483-11438561)
chr1 (199-265)||(45235389-45235455)
chr1 (238-291)||(12370202-12370255)
chr1 (198-291)||(17745240-17745333)
chr1 (202-295)||(24730387-24730480)
chr1 (198-291)||(30689011-30689104)
chr1 (200-297)||(44126396-44126493)
chr1 (199-295)||(6122794-6122890)
chr1 (199-255)||(31794284-31794340)
chr1 (201-277)||(33700771-33700847)
chr1 (199-274)||(521218-521293)
chr1 (198-277)||(4280449-4280528)
chr1 (199-274)||(12662282-12662357)
chr1 (199-277)||(2799862-2799940)
chr1 (205-291)||(6948061-6948147)
chr1 (197-255)||(9165215-9165273)
chr1 (203-277)||(9224779-9224853)
chr1 (199-269)||(11687630-11687700)
chr1 (199-293)||(37400274-37400368)
chr1 (220-262)||(42983387-42983429)
chr1 (197-274)||(7743326-7743403)
chr1 (220-273)||(36124854-36124907)
chr1 (198-255)||(51703778-51703835)
chr1 (199-291)||(19940856-19940948)
chr1 (197-276)||(9117117-9117196)
chr1 (198-277)||(18037611-18037690)
chr1 (240-295)||(36428753-36428808)
chr1 (240-291)||(42949276-42949327)
chr1 (210-293)||(52336756-52336839)
chr1 (197-291)||(1094523-1094617)
chr1 (231-293)||(1600274-1600336)
chr1 (203-277)||(4824975-4825049)
chr1 (199-277)||(8177180-8177258)
chr1 (202-284)||(9964441-9964523)
chr1 (197-295)||(10526821-10526919)
chr1 (223-277)||(12587294-12587348)
chr1 (199-277)||(19528325-19528403)
chr1 (199-277)||(21267991-21268069)
chr1 (199-277)||(21547478-21547556)
chr1 (199-253)||(21694446-21694500)
chr1 (219-277)||(27476769-27476827)
chr1 (199-277)||(36371470-36371548)
chr1 (195-249)||(38978968-38979022)
chr1 (203-252)||(10554639-10554688)
chr1 (198-291)||(11068827-11068920)
chr1 (240-277)||(17297025-17297062)
chr1 (220-265)||(28411351-28411396)
chr1 (220-277)||(31383796-31383853)
chr1 (206-255)||(47720837-47720886)
chr1 (206-255)||(47727829-47727878)
chr1 (198-255)||(52116801-52116858)
chr1 (199-291)||(2219972-2220064)
chr1 (220-252)||(30360815-30360847)
chr1 (240-292)||(43446004-43446056)
chr1 (198-265)||(50901580-50901648)
[»] chr3 (55 HSPs)
chr3 (199-292)||(31520588-31520681)
chr3 (199-291)||(36720381-36720473)
chr3 (197-277)||(49494144-49494224)
chr3 (200-291)||(47454601-47454692)
chr3 (199-265)||(16212982-16213048)
chr3 (199-295)||(10499089-10499185)
chr3 (199-265)||(2597230-2597296)
chr3 (206-292)||(4844494-4844580)
chr3 (206-292)||(4870190-4870276)
chr3 (199-277)||(17108896-17108974)
chr3 (199-277)||(27093359-27093437)
chr3 (199-263)||(5499419-5499483)
chr3 (199-277)||(46518628-46518706)
chr3 (198-292)||(51903861-51903955)
chr3 (198-291)||(14186647-14186739)
chr3 (198-295)||(47810724-47810821)
chr3 (199-295)||(31788951-31789046)
chr3 (198-274)||(35111179-35111255)
chr3 (203-258)||(36797691-36797746)
chr3 (199-277)||(8368797-8368875)
chr3 (199-277)||(30311306-30311384)
chr3 (198-292)||(40063618-40063712)
chr3 (229-295)||(44743835-44743901)
chr3 (206-291)||(2667869-2667954)
chr3 (198-295)||(8170671-8170768)
chr3 (197-277)||(10445137-10445218)
chr3 (198-291)||(12761511-12761604)
chr3 (198-255)||(19341800-19341857)
chr3 (199-292)||(37788448-37788541)
chr3 (206-263)||(38550416-38550473)
chr3 (238-291)||(52769967-52770020)
chr3 (199-255)||(4222141-4222197)
chr3 (198-290)||(14339609-14339701)
chr3 (198-254)||(31510739-31510795)
chr3 (229-277)||(31608522-31608570)
chr3 (202-293)||(13808867-13808958)
chr3 (199-274)||(15048062-15048137)
chr3 (198-277)||(16991541-16991620)
chr3 (241-292)||(20501738-20501789)
chr3 (198-277)||(28703402-28703481)
chr3 (198-293)||(40286839-40286934)
chr3 (202-265)||(53412948-53413011)
chr3 (199-249)||(203090-203140)
chr3 (201-291)||(8390639-8390729)
chr3 (199-277)||(37051292-37051370)
chr3 (206-295)||(8075107-8075196)
chr3 (207-308)||(11612307-11612408)
chr3 (199-308)||(27923010-27923119)
chr3 (238-291)||(33861718-33861771)
chr3 (229-274)||(47279405-47279450)
chr3 (198-255)||(51766895-51766951)
chr3 (197-253)||(42430333-42430388)
chr3 (220-276)||(44069779-44069835)
chr3 (239-295)||(47236951-47237007)
chr3 (199-275)||(53956384-53956460)
[»] chr8 (32 HSPs)
chr8 (199-295)||(44780094-44780190)
chr8 (199-282)||(35641894-35641977)
chr8 (202-277)||(36205198-36205273)
chr8 (199-277)||(16852340-16852418)
chr8 (198-295)||(35287715-35287812)
chr8 (199-295)||(28783060-28783156)
chr8 (202-274)||(34966851-34966923)
chr8 (199-290)||(19703472-19703563)
chr8 (199-277)||(6569769-6569847)
chr8 (221-295)||(11492053-11492127)
chr8 (199-277)||(29431011-29431089)
chr8 (198-295)||(11819775-11819872)
chr8 (198-291)||(23361633-23361726)
chr8 (199-254)||(20994479-20994534)
chr8 (199-277)||(968362-968440)
chr8 (201-295)||(2203494-2203588)
chr8 (199-277)||(3826775-3826853)
chr8 (199-293)||(11942453-11942547)
chr8 (201-277)||(3624582-3624658)
chr8 (199-291)||(8484999-8485091)
chr8 (197-293)||(27750728-27750824)
chr8 (199-255)||(30483904-30483960)
chr8 (198-293)||(33727855-33727950)
chr8 (199-265)||(5264544-5264610)
chr8 (199-265)||(8059632-8059698)
chr8 (199-277)||(18540298-18540376)
chr8 (199-265)||(43969008-43969074)
chr8 (242-291)||(28787480-28787529)
chr8 (198-291)||(35826310-35826403)
chr8 (199-295)||(11793501-11793597)
chr8 (199-277)||(14254727-14254802)
chr8 (197-265)||(23874392-23874460)
[»] chr6 (27 HSPs)
chr6 (198-292)||(11423565-11423659)
chr6 (198-291)||(3715451-3715544)
chr6 (199-295)||(31622971-31623067)
chr6 (199-277)||(33549104-33549182)
chr6 (198-291)||(12633008-12633101)
chr6 (199-291)||(12234491-12234583)
chr6 (206-293)||(8268645-8268732)
chr6 (198-273)||(13661520-13661594)
chr6 (198-297)||(30127399-30127498)
chr6 (201-291)||(32613124-32613214)
chr6 (199-292)||(12188286-12188379)
chr6 (240-291)||(346571-346622)
chr6 (203-277)||(6776605-6776679)
chr6 (199-308)||(14199914-14200023)
chr6 (238-295)||(14278091-14278148)
chr6 (206-254)||(3968215-3968263)
chr6 (197-277)||(13227156-13227236)
chr6 (199-295)||(14557962-14558057)
chr6 (229-269)||(15951308-15951348)
chr6 (220-295)||(6385883-6385958)
chr6 (200-291)||(6758406-6758497)
chr6 (199-290)||(21418470-21418561)
chr6 (199-265)||(3779339-3779405)
chr6 (235-277)||(18562636-18562678)
chr6 (199-261)||(24641204-24641266)
chr6 (240-297)||(9626073-9626130)
chr6 (238-291)||(16405124-16405177)
[»] scaffold0258 (1 HSPs)
scaffold0258 (199-277)||(15321-15399)
[»] scaffold0118 (2 HSPs)
scaffold0118 (198-295)||(41613-41710)
scaffold0118 (199-253)||(44126-44180)
[»] scaffold0194 (1 HSPs)
scaffold0194 (220-295)||(13026-13101)
[»] scaffold0211 (1 HSPs)
scaffold0211 (199-253)||(24053-24107)
[»] scaffold0517 (1 HSPs)
scaffold0517 (199-293)||(7708-7802)
[»] scaffold0009 (1 HSPs)
scaffold0009 (198-276)||(19846-19924)
[»] scaffold0299 (1 HSPs)
scaffold0299 (220-277)||(11549-11606)
[»] scaffold0101 (1 HSPs)
scaffold0101 (220-293)||(43314-43387)
[»] scaffold0172 (1 HSPs)
scaffold0172 (199-295)||(15757-15853)
[»] scaffold0368 (1 HSPs)
scaffold0368 (240-291)||(14949-15000)
[»] scaffold0126 (1 HSPs)
scaffold0126 (209-292)||(25330-25413)
[»] scaffold0074 (1 HSPs)
scaffold0074 (240-291)||(45743-45794)
[»] scaffold0021 (1 HSPs)
scaffold0021 (220-262)||(157000-157042)
[»] scaffold0008 (1 HSPs)
scaffold0008 (221-291)||(49328-49398)
[»] scaffold0471 (1 HSPs)
scaffold0471 (222-263)||(8654-8695)
[»] scaffold0300 (1 HSPs)
scaffold0300 (207-308)||(4348-4449)
[»] scaffold0044 (1 HSPs)
scaffold0044 (219-276)||(92967-93024)
[»] scaffold0032 (1 HSPs)
scaffold0032 (199-308)||(112282-112391)
[»] scaffold0006 (1 HSPs)
scaffold0006 (206-291)||(162993-163078)
[»] scaffold0291 (1 HSPs)
scaffold0291 (199-283)||(2462-2546)
[»] scaffold0070 (1 HSPs)
scaffold0070 (199-255)||(42540-42596)


Alignment Details
Target: chr7 (Bit Score: 158; Significance: 4e-84; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 30 - 295
Target Start/End: Original strand, 24513629 - 24513893
Alignment:
Q  30 ctaatgttatgttatgtctctcaggtaactatcccatttgaagatagacatgatcataggttggtttggataaataacaattctggagatatgactttta 129  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||| |||||||||||||| |||||||| |||||    
T  24513629 ctaatgttatgttatgtctctcaggtaactatcccatttgaagatagacatgat---aggttggtttggaaaaataacaattctgaagatatgattttta 24513725  T
Q  130 aggatgnnnnnnnn-acaaatgtaaacc-ggggcaactattaaatgggcaaaatcaatttggtgtcctgataacccacttgggttggtctaatggtattg 227  Q
    ||||||         ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||    
T  24513726 aggatgtttttttgtacaaatgtaaaccaggggcaactattaaatgggcaaaatcaatttggtgtcctgataacccacttgggttggcctagtggtattg 24513825  T
Q  228 acttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaatttgggt 295  Q
     |||||||||||||||||| || ||||||||||||||| ||| |||| ||||   |||||||||||||    
T  24513826 gcttgagatttgggagtgtacttctccttgaggtctcaggttcgattttcactgatgtcaatttgggt 24513893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 199 - 293
Target Start/End: Complemental strand, 20335907 - 20335813
Alignment:
Q  199 aacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaatttgg 293  Q
    ||||||||||||||||||||  ||||||| |||| || ||||||||||||||||||| ||||||||| ||| ||||||||||  |||||||||||    
T  20335907 aacccacttgggttggtctagaggtattggcttgggacttgggagtgtgctcctcctcgaggtctcaggttcgattctcaccgatgtcaatttgg 20335813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 199 - 277
Target Start/End: Complemental strand, 23301678 - 23301600
Alignment:
Q  199 aacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctc 277  Q
    |||||||||||||||| ||  ||||||||||||| || ||||||||||||||||||||||||||||| |||||||||||    
T  23301678 aacccacttgggttggcctggtggtattgacttgggacttgggagtgtgctcctccttgaggtctcaagtttgattctc 23301600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 197 - 277
Target Start/End: Original strand, 18363694 - 18363774
Alignment:
Q  197 ataacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctc 277  Q
    |||||||||||||||||| ||| |||||| | |||||||||||||||||||||||||||  |||||||| |||||||||||    
T  18363694 ataacccacttgggttggcctagtggtataggcttgagatttgggagtgtgctcctcctcaaggtctcaggtttgattctc 18363774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 199 - 277
Target Start/End: Original strand, 2446308 - 2446386
Alignment:
Q  199 aacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctc 277  Q
    ||||||||||||||||||| ||||||||| |||| || ||||||||||||||||||| ||| ||||| ||| |||||||    
T  2446308 aacccacttgggttggtctgatggtattggcttgggacttgggagtgtgctcctcctcgagatctcaagttcgattctc 2446386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 198 - 295
Target Start/End: Original strand, 15137552 - 15137649
Alignment:
Q  198 taacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaatttgggt 295  Q
    ||||||||||||||||| ||  ||||| ||||||| ||||| ||||||||||||||||  |||||||| ||| ||||||| |  ||||||||||||||    
T  15137552 taacccacttgggttggcctggtggtactgacttgggatttaggagtgtgctcctcctcaaggtctcaggttagattctctctggtgtcaatttgggt 15137649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 199 - 295
Target Start/End: Complemental strand, 17041088 - 17040992
Alignment:
Q  199 aacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaatttgggt 295  Q
    |||||||||||||||||||| ||| |||| |||| ||| ||| ||||||||||||||  |||||||| ||| ||||||| | |||| ||||||||||    
T  17041088 aacccacttgggttggtctagtggcattggcttgggatctggaagtgtgctcctcctcaaggtctcaggttcgattctctcaagtgccaatttgggt 17040992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 198 - 277
Target Start/End: Original strand, 22760862 - 22760941
Alignment:
Q  198 taacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctc 277  Q
    ||||||||||||||||||||  ||||||||||||| ||  ||||||||||||||||||  |||||||| ||| |||||||    
T  22760862 taacccacttgggttggtctggtggtattgacttgggacctgggagtgtgctcctcctcaaggtctcaggttcgattctc 22760941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 198 - 274
Target Start/End: Original strand, 48771937 - 48772013
Alignment:
Q  198 taacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgatt 274  Q
    |||||||||||||||||  |  |||||||| |||| ||| |||||||||||||||||||||||||||| ||| ||||    
T  48771937 taacccacttgggttggcttggtggtattggcttgggatctgggagtgtgctcctccttgaggtctcaggttcgatt 48772013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 198 - 277
Target Start/End: Complemental strand, 26459487 - 26459408
Alignment:
Q  198 taacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctc 277  Q
    ||||||||||||||||| ||| |||||||| |||| ||  ||||||||||||||||||  |||||||| ||| |||||||    
T  26459487 taacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaaggtctcaggttcgattctc 26459408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 199 - 277
Target Start/End: Original strand, 23552118 - 23552196
Alignment:
Q  199 aacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctc 277  Q
    |||||||||||||||| ||| || |||||||||| ||  ||||||||||||||||||  |||||||| ||| |||||||    
T  23552118 aacccacttgggttggcctagtgctattgacttgggacctgggagtgtgctcctcctcaaggtctcaagttcgattctc 23552196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 199 - 277
Target Start/End: Original strand, 43215184 - 43215262
Alignment:
Q  199 aacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctc 277  Q
    |||||||||||||||||||| |||||||| |||| ||  | ||||||||||||||||  |||||||| ||| |||||||    
T  43215184 aacccacttgggttggtctagtggtattggcttgggacctcggagtgtgctcctcctcaaggtctcaggttcgattctc 43215262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 199 - 292
Target Start/End: Original strand, 25590611 - 25590704
Alignment:
Q  199 aacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaatttg 292  Q
    |||||||||||||||  ||  |||||||| |||||||| |||||||||||||||||| ||||||||  ||| |||| ||  | |||||||||||    
T  25590611 aacccacttgggttgacctgttggtattggcttgagatctgggagtgtgctcctcctcgaggtctcgggttcgattttcttcggtgtcaatttg 25590704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 204 - 265
Target Start/End: Complemental strand, 41519335 - 41519274
Alignment:
Q  204 acttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctca 265  Q
    ||||||||||| ||| ||||||||||||| ||||| ||||||||||||||||  ||||||||    
T  41519335 acttgggttggcctagtggtattgacttgggatttaggagtgtgctcctcctcaaggtctca 41519274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 200 - 256
Target Start/End: Complemental strand, 2495911 - 2495855
Alignment:
Q  200 acccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctcctt 256  Q
    ||||||||| ||||| |||||  ||||||||||||||||| ||||||||||||||||    
T  2495911 acccacttgagttggcctaataatattgacttgagatttgtgagtgtgctcctcctt 2495855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 220 - 276
Target Start/End: Original strand, 8108602 - 8108658
Alignment:
Q  220 tggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattct 276  Q
    ||||||||||||| ||| |||||||| ||||||||||||||||||| ||| ||||||    
T  8108602 tggtattgacttgggatatgggagtgcgctcctccttgaggtctcaggttcgattct 8108658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 199 - 295
Target Start/End: Complemental strand, 18056851 - 18056755
Alignment:
Q  199 aacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaatttgggt 295  Q
    |||||||||||||| ||||  ||||||||||||| |  || ||||||||||||||||  |||||||| ||| ||||||| || |||  |||||||||    
T  18056851 aacccacttgggttagtctggtggtattgacttgggtcttcggagtgtgctcctcctgaaggtctcaggttcgattctccccggtgctaatttgggt 18056755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 203 - 255
Target Start/End: Original strand, 23595733 - 23595785
Alignment:
Q  203 cacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctcct 255  Q
    |||||||||||||||  ||||||||||||||||| | ||||||||||||||||    
T  23595733 cacttgggttggtctggtggtattgacttgagatctcggagtgtgctcctcct 23595785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 202 - 295
Target Start/End: Complemental strand, 15905746 - 15905654
Alignment:
Q  202 ccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaatttgggt 295  Q
    ||||||||||||| ||   ||||||| |||| ||  ||||||||||||||||||| |||||||| ||| ||||||| | | |||||||||||||    
T  15905746 ccacttgggttggcctggcggtattggcttgggacctgggagtgtgctcctcctt-aggtctcaggttcgattctccctaatgtcaatttgggt 15905654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 197 - 265
Target Start/End: Complemental strand, 18011428 - 18011359
Alignment:
Q  197 ataacccacttgggttggtctaatggta-ttgacttgagatttgggagtgtgctcctccttgaggtctca 265  Q
    |||||||| ||||||||| ||||||||| ||| |||||||  || |||||||||||||| ||||||||||    
T  18011428 ataacccagttgggttggcctaatggtaattggcttgagacctgagagtgtgctcctccatgaggtctca 18011359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 198 - 255
Target Start/End: Complemental strand, 25021412 - 25021355
Alignment:
Q  198 taacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctcct 255  Q
    ||||||||||||||||| ||| |||||||| |||| ||  ||||||||||||||||||    
T  25021412 taacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcct 25021355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 199 - 276
Target Start/End: Complemental strand, 39499795 - 39499718
Alignment:
Q  199 aacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattct 276  Q
    |||||||||||||||| ||| |||||||| |||| ||  || ||||||| ||||| || |||||||||||| ||||||    
T  39499795 aacccacttgggttggcctagtggtattggcttgggacctgtgagtgtgttcctctttaaggtctcatgttcgattct 39499718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 238 - 291
Target Start/End: Original strand, 42711997 - 42712050
Alignment:
Q  238 tgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaattt 291  Q
    ||||||||||||||||||  |||||||||||| ||||||| | |||||||||||    
T  42711997 tgggagtgtgctcctcctcaaggtctcatgttcgattctccctagtgtcaattt 42712050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 277
Target Start/End: Original strand, 21877814 - 21877886
Alignment:
Q  205 cttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctc 277  Q
    |||| ||||| ||| ||||||||||||| ||  |||||| |||||||||||| |||||||| ||| |||||||    
T  21877814 cttgagttggcctagtggtattgacttgggacctgggagggtgctcctccttaaggtctcacgttcgattctc 21877886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 201 - 277
Target Start/End: Complemental strand, 29385817 - 29385741
Alignment:
Q  201 cccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctc 277  Q
    |||||||||||||| |  ||||| ||| |||| || || ||||||||||||||||  |||||||| |||||||||||    
T  29385817 cccacttgggttggccggatggtgttggcttgggactttggagtgtgctcctcctcaaggtctcaggtttgattctc 29385741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 197 - 277
Target Start/End: Original strand, 39631842 - 39631922
Alignment:
Q  197 ataacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctc 277  Q
    |||||||||||||||||| ||| |||||||| |||| ||  |||||||  |||||||||  |||||||| ||| |||||||    
T  39631842 ataacccacttgggttggcctagtggtattggcttgggacctgggagtaagctcctcctcaaggtctcaggttcgattctc 39631922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 198 - 290
Target Start/End: Original strand, 43590906 - 43590998
Alignment:
Q  198 taacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaatt 290  Q
    ||||||| ||||||||| ||  |||||||| |||| || |||||||||||||||||||  | |||||| ||| ||||||| | |||| |||||    
T  43590906 taacccagttgggttggcctggtggtattggcttgggacttgggagtgtgctcctcctcaatgtctcaggttcgattctccctagtgccaatt 43590998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 206 - 261
Target Start/End: Original strand, 33362639 - 33362694
Alignment:
Q  206 ttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggt 261  Q
    |||||||||| |  |||||||||||||||||||| || |||||||||||| |||||    
T  33362639 ttgggttggtatggtggtattgacttgagatttgagaatgtgctcctcctcgaggt 33362694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 197 - 292
Target Start/End: Complemental strand, 33869523 - 33869428
Alignment:
Q  197 ataacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaatttg 292  Q
    |||||||||||||||||| ||| | |||||| |||||||  ||| ||||||||||| ||  |||||||  ||| ||||||| |  |||||||||||    
T  33869523 ataacccacttgggttggcctagtagtattggcttgagacctggaagtgtgctccttctcaaggtctctggttcgattctctctggtgtcaatttg 33869428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 202 - 277
Target Start/End: Complemental strand, 37162423 - 37162348
Alignment:
Q  202 ccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctc 277  Q
    |||||| |||||| ||| |||||  ||||||||||||||||||||||| || ||  |||||||| ||| |||||||    
T  37162423 ccacttcggttggcctagtggtaaagacttgagatttgggagtgtgcttcttctcaaggtctcaagttcgattctc 37162348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 199 - 274
Target Start/End: Complemental strand, 45709784 - 45709709
Alignment:
Q  199 aacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgatt 274  Q
    |||||| ||||||||| ||| |||||||  |||| ||| || ||||||||||||||| ||||||||| ||| ||||    
T  45709784 aacccatttgggttggcctagtggtattagcttgggatctgagagtgtgctcctcctcgaggtctcaggttcgatt 45709709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 202 - 261
Target Start/End: Complemental strand, 45976996 - 45976937
Alignment:
Q  202 ccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggt 261  Q
    ||||||||||||| ||| |||||||| |||| ||  ||||||||||||||||||| ||||    
T  45976996 ccacttgggttggcctagtggtattggcttgtgacctgggagtgtgctcctccttaaggt 45976937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 275
Target Start/End: Original strand, 5934151 - 5934197
Alignment:
Q  229 cttgagatttgggagtgtgctcctccttgaggtctcatgtttgattc 275  Q
    |||| ||| |||||||||||||||||||||||| ||||||| |||||    
T  5934151 cttgggatctgggagtgtgctcctccttgaggtttcatgttcgattc 5934197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 238 - 308
Target Start/End: Original strand, 7721408 - 7721478
Alignment:
Q  238 tgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaatttgggtagaataatatagc 308  Q
    ||||||||| ||||||||  |||||||||||| ||||||| |  |||||||||||| | ||||||| ||||    
T  7721408 tgggagtgtactcctcctcaaggtctcatgttcgattctctctggtgtcaatttggatggaataatttagc 7721478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 201 - 255
Target Start/End: Original strand, 21854550 - 21854604
Alignment:
Q  201 cccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctcct 255  Q
    |||||||||||||| || ||||||||| || | ||| ||||||||||||||||||    
T  21854550 cccacttgggttggcctgatggtattggctagggatctgggagtgtgctcctcct 21854604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 199 - 277
Target Start/End: Complemental strand, 25655304 - 25655226
Alignment:
Q  199 aacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctc 277  Q
    ||||||| ||||||||| || ||||||||||||| ||| || ||||||| |||||||  |||| ||| ||| |||||||    
T  25655304 aacccacctgggttggtttagtggtattgacttgggatctgtgagtgtgatcctcctcaaggtttcaggttcgattctc 25655226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 291
Target Start/End: Complemental strand, 37117200 - 37117138
Alignment:
Q  229 cttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaattt 291  Q
    |||||||||||||||||| |||||||||||||| ||  ||| ||||||| || ||| ||||||    
T  37117200 cttgagatttgggagtgtactcctccttgaggtttcgggttcgattctctccggtgccaattt 37117138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 197 - 255
Target Start/End: Complemental strand, 42836079 - 42836021
Alignment:
Q  197 ataacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctcct 255  Q
    |||||||||||||||||| ||| |||||||| |||| ||  ||||||||||||| ||||    
T  42836079 ataacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcttcct 42836021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 308
Target Start/End: Complemental strand, 43663168 - 43663062
Alignment:
Q  202 ccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaatttgggtagaata 301  Q
    ||||||||||||| || |||||||||||||| ||  | |||| ||| ||||||| ||| ||||| ||| || |||| || || ||||||||||| || ||    
T  43663168 ccacttgggttggcctgatggtattgacttgggacctaggagcgtggtcctcctcgagatctcaggttcgaatctctccggtatcaatttgggtggacta 43663069  T
Q  302 atatagc 308  Q
    || ||||    
T  43663068 atttagc 43663062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 198 - 295
Target Start/End: Complemental strand, 5579311 - 5579214
Alignment:
Q  198 taacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaatttgggt 295  Q
    ||||||||||||||||  ||  |||| ||| |||| ||  | ||||||||||||||||  |||||||| |||||| |||| || ||| ||||||||||    
T  5579311 taacccacttgggttgacctggtggtgttggcttgggaccttggagtgtgctcctcctcaaggtctcaggtttgactctccccggtgccaatttgggt 5579214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 276
Target Start/End: Complemental strand, 23735303 - 23735226
Alignment:
Q  199 aacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattct 276  Q
    ||||||||||||||| |||| |||||||| |||   |||||||| ||||||||||||  | ||||||| || ||||||    
T  23735303 aacccacttgggttgatctagtggtattggcttagaatttgggattgtgctcctcctcaaagtctcatattcgattct 23735226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 206 - 255
Target Start/End: Complemental strand, 36803696 - 36803647
Alignment:
Q  206 ttgggttggtctaatggtattgacttgagatttgggagtgtgctcctcct 255  Q
    ||||||||||||| ||||||||||||| ||  ||||||| ||||||||||    
T  36803696 ttgggttggtctagtggtattgacttgggacctgggagtatgctcctcct 36803647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 277
Target Start/End: Complemental strand, 37085604 - 37085547
Alignment:
Q  220 tggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctc 277  Q
    |||||||| |||| ||||||||||||||||| |||| ||||| ||| ||| |||||||    
T  37085604 tggtattggcttgggatttgggagtgtgctcatcctcgaggtttcaggttcgattctc 37085547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 239 - 291
Target Start/End: Original strand, 7309396 - 7309447
Alignment:
Q  239 gggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaattt 291  Q
    ||||||||||||||||| ||||||||| ||| ||||||| || ||||||||||    
T  7309396 gggagtgtgctcctcctcgaggtctcaagttcgattctctcc-gtgtcaattt 7309447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 199 - 295
Target Start/End: Complemental strand, 11721036 - 11720940
Alignment:
Q  199 aacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaatttgggt 295  Q
    |||| |||| |||||| ||  |||||||| |||| ||  ||||| ||||||||||||| |||| |||  || ||||||| |||||| ||||||||||    
T  11721036 aaccaacttcggttggcctggtggtattggcttgggacctgggaatgtgctcctccttaaggtatcagattcgattctccccagtgccaatttgggt 11720940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 200 - 264
Target Start/End: Original strand, 22927477 - 22927541
Alignment:
Q  200 acccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctc 264  Q
    ||||||||||||||| ||| ||||||| ||||| ||| | |||||||||| |||||  |||||||    
T  22927477 acccacttgggttggcctagtggtattaacttgggatctaggagtgtgcttctcctaaaggtctc 22927541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 199 - 255
Target Start/End: Original strand, 26526290 - 26526346
Alignment:
Q  199 aacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctcct 255  Q
    |||||| |||| |||||||  ||||||||||||  |||||| |||||||||||||||    
T  26526290 aacccatttggattggtctggtggtattgacttaggatttgagagtgtgctcctcct 26526346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 198 - 261
Target Start/End: Original strand, 36188854 - 36188918
Alignment:
Q  198 taacccacttgggttggtctaatggta-ttgacttgagatttgggagtgtgctcctccttgaggt 261  Q
    |||||||||| |||||| |||||| || |||  ||| || |||||||||||||||||||||||||    
T  36188854 taacccacttaggttggcctaatgataattggattgggacttgggagtgtgctcctccttgaggt 36188918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 61; Significance: 3e-26; HSPs: 49)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 199 - 291
Target Start/End: Original strand, 19016031 - 19016123
Alignment:
Q  199 aacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaattt 291  Q
    ||||||||||||||||||| ||||||||| ||||||| ||||||||||||||||||| ||||||||| ||||||||||| || ||| ||||||    
T  19016031 aacccacttgggttggtctgatggtattggcttgagacttgggagtgtgctcctcctcgaggtctcaagtttgattctccccggtgccaattt 19016123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 198 - 303
Target Start/End: Original strand, 28846690 - 28846795
Alignment:
Q  198 taacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaatttgggtag 297  Q
    |||||||||| ||||| |||| ||||||||||||| ||  |||||||||||||||||| || |||||| ||| |||| |||||  |||||||||||||||    
T  28846690 taacccacttaggttgatctagtggtattgacttgggacctgggagtgtgctcctcctcgatgtctcaggttcgattatcaccgatgtcaatttgggtag 28846789  T
Q  298 aataat 303  Q
    | ||||    
T  28846790 actaat 28846795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 195 - 276
Target Start/End: Complemental strand, 4439059 - 4438978
Alignment:
Q  195 tgataacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattct 276  Q
    |||||||||||||||||||| ||||||||||| ||||| ||| || |||||||||||||||  ||||| |||||| ||||||    
T  4439059 tgataacccacttgggttggcctaatggtattaacttgggatctgagagtgtgctcctcctcaaggtcgcatgttcgattct 4438978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 199 - 276
Target Start/End: Complemental strand, 29197452 - 29197375
Alignment:
Q  199 aacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattct 276  Q
    ||||||||||||||||  |  ||||||||||||| || |||||||||||||||||||||| |||||||||| ||||||    
T  29197452 aacccacttgggttggcttggtggtattgacttgggacttgggagtgtgctcctccttgatgtctcatgttcgattct 29197375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 197 - 289
Target Start/End: Complemental strand, 12994454 - 12994363
Alignment:
Q  197 ataacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaat 289  Q
    ||||||| |||| ||||||||| ||||||||||||| ||  ||||||||||||||||||| |||||||| ||| ||||| |||| ||||||||    
T  12994454 ataacccgcttgagttggtctagtggtattgacttgggacctgggagtgtgctcctccttaaggtctcaagttcgattc-caccggtgtcaat 12994363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 203 - 274
Target Start/End: Original strand, 3001383 - 3001454
Alignment:
Q  203 cacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgatt 274  Q
    |||||||||||| ||| ||||||||||||||||| | |||||||||||||||||||| ||||| ||| ||||    
T  3001383 cacttgggttggcctagtggtattgacttgagatctaggagtgtgctcctccttgagatctcaggttcgatt 3001454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 197 - 252
Target Start/End: Complemental strand, 5147757 - 5147702
Alignment:
Q  197 ataacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcct 252  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||||| |||||||    
T  5147757 ataacccacttgggttggtctagtggtattgacttgagatctgggagtatgctcct 5147702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 203 - 277
Target Start/End: Original strand, 38551772 - 38551846
Alignment:
Q  203 cacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctc 277  Q
    |||||||||||||||||||||||||| |||| |||||||||||||||| | ||| ||||||  |||| |||||||    
T  38551772 cacttgggttggtctaatggtattgatttgaaatttgggagtgtgctctttcttaaggtcttgtgttcgattctc 38551846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 199 - 275
Target Start/End: Complemental strand, 34041664 - 34041588
Alignment:
Q  199 aacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattc 275  Q
    |||||||||||||||| ||| ||||||||||||  ||| || |||||||||||||||  |||||||| |||||||||    
T  34041664 aacccacttgggttggcctagtggtattgacttaggatctgagagtgtgctcctcctcaaggtctcaggtttgattc 34041588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 199 - 295
Target Start/End: Complemental strand, 42327471 - 42327375
Alignment:
Q  199 aacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaatttgggt 295  Q
    |||||||||||||||| ||| |||||||| |||| ||  ||||||||||||||||||  |||||||| ||| |||||||  | ||| ||||||||||    
T  42327471 aacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaaggtctcaggttcgattctcttcggtgccaatttgggt 42327375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 199 - 295
Target Start/End: Original strand, 42602554 - 42602650
Alignment:
Q  199 aacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaatttgggt 295  Q
    |||||||||||||||| ||| |||||||| |||| ||  ||||||||||||||| ||  |||||| | ||||||||||| || ||| ||||||||||    
T  42602554 aacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctccttctcaaggtcttaggtttgattctctccggtgccaatttgggt 42602650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 197 - 292
Target Start/End: Original strand, 11062358 - 11062453
Alignment:
Q  197 ataacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaatttg 292  Q
    |||||||||||||||||| ||| || ||||| ||||  | ||||||||||||| |||||  |||||||| ||||||||||| |  |||||||||||    
T  11062358 ataacccacttgggttggcctagtgatattggcttggaacttgggagtgtgcttctcctcaaggtctcaggtttgattctctcttgtgtcaatttg 11062453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 199 - 282
Target Start/End: Original strand, 39714992 - 39715075
Alignment:
Q  199 aacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccag 282  Q
    ||||||||||||||||  |  ||||||||||||| ||  |||||||||||||||||| ||||||||| ||| ||||||| ||||    
T  39714992 aacccacttgggttggcatggtggtattgacttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctccccag 39715075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 198 - 277
Target Start/End: Complemental strand, 40416467 - 40416388
Alignment:
Q  198 taacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctc 277  Q
    ||||||||||||||||| ||| |||||||||||||  |  ||||||| ||||||||||| |||||||| ||| |||||||    
T  40416467 taacccacttgggttggcctagtggtattgacttggaacctgggagtatgctcctccttaaggtctcaggttcgattctc 40416388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 199 - 277
Target Start/End: Original strand, 1729816 - 1729894
Alignment:
Q  199 aacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctc 277  Q
    |||||||||||||||| ||| |||||||| |||| || |||||||||||||||||||  |||||| |  ||||||||||    
T  1729816 aacccacttgggttgggctagtggtattggcttgggacttgggagtgtgctcctcctctaggtcttagatttgattctc 1729894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 199 - 277
Target Start/End: Original strand, 19244109 - 19244187
Alignment:
Q  199 aacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctc 277  Q
    |||||||||||||||||||| ||||||||||||| ||  || ||||||||||||||   |||||||| ||| |||||||    
T  19244109 aacccacttgggttggtctactggtattgacttgggacctgagagtgtgctcctccccaaggtctcaggttcgattctc 19244187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 199 - 277
Target Start/End: Original strand, 35710391 - 35710469
Alignment:
Q  199 aacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctc 277  Q
    |||||||||| |||| |||  ||| |||||||||||| || |||||||| ||||| ||||||||||||||| |||||||    
T  35710391 aacccacttgagttgatctggtgggattgacttgagacttaggagtgtgttcctctttgaggtctcatgttcgattctc 35710469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 199 - 277
Target Start/End: Original strand, 45026743 - 45026821
Alignment:
Q  199 aacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctc 277  Q
    ||||||||||| |||||||| | ||| |||||||  | || ||||||||||||||||  ||||||||||||||||||||    
T  45026743 aacccacttggtttggtctattagtaatgacttggaacttaggagtgtgctcctcctcaaggtctcatgtttgattctc 45026821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 208 - 273
Target Start/End: Original strand, 5952169 - 5952234
Alignment:
Q  208 gggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgat 273  Q
    |||||| ||||||||||||||||||||||||| ||||| |||||||||| | || ||| |||||||    
T  5952169 gggttgatctaatggtattgacttgagatttgagagtgggctcctccttaaagtgtcaggtttgat 5952234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 198 - 291
Target Start/End: Original strand, 24191837 - 24191930
Alignment:
Q  198 taacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaattt 291  Q
    |||| |||||| ||||| || ||||||||| |||| ||  || ||||||||||||||||||| ||||||| | ||||||| || ||||||||||    
T  24191837 taacacacttgagttggcctgatggtattggcttgggacctgagagtgtgctcctccttgagatctcatgatcgattctccccggtgtcaattt 24191930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 199 - 291
Target Start/End: Complemental strand, 7799111 - 7799019
Alignment:
Q  199 aacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaattt 291  Q
    |||||||||||||||  ||  |||||||| |||| || ||||||||||||||||||| ||| |||||  || ||||||| |||||| ||||||    
T  7799111 aacccacttgggttgtcctggtggtattggcttgggacttgggagtgtgctcctcctcgagatctcagattcgattctctccagtgccaattt 7799019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 199 - 291
Target Start/End: Original strand, 11251087 - 11251179
Alignment:
Q  199 aacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaattt 291  Q
    ||||||||| ||||||  || |||||||| |||| || |||| ||||||||||||||  |||||||| ||||||||||| |  ||||||||||    
T  11251087 aacccacttaggttggcttagtggtattggcttgggacttggaagtgtgctcctcctcaaggtctcaggtttgattctctctggtgtcaattt 11251179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 207 - 291
Target Start/End: Original strand, 21213777 - 21213861
Alignment:
Q  207 tgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaattt 291  Q
    |||||||||||  |||||||| |||| ||  |||||||||| ||||||||||||||||| ||| ||||||| || ||| ||||||    
T  21213777 tgggttggtctggtggtattggcttgggacctgggagtgtgttcctccttgaggtctcaggttcgattctccccggtgccaattt 21213861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 199 - 291
Target Start/End: Original strand, 29503271 - 29503362
Alignment:
Q  199 aacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaattt 291  Q
    |||||||||||||||| ||| ||||||||  ||| ||  ||||||||||||||||||  |||||||| ||| ||||||| || ||||||||||    
T  29503271 aacccacttgggttggcctagtggtattggtttgggacctgggagtgtgctcctcctcaaggtctcaggttcgattctc-ccggtgtcaattt 29503362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 199 - 255
Target Start/End: Original strand, 35916086 - 35916142
Alignment:
Q  199 aacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctcct 255  Q
    |||||||||||||||||||  |||||||||||||||||||  ||||||| |||||||    
T  35916086 aacccacttgggttggtctggtggtattgacttgagatttaagagtgtgttcctcct 35916142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 196 - 275
Target Start/End: Original strand, 42860345 - 42860424
Alignment:
Q  196 gataacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattc 275  Q
    ||||||| ||||| ||||| ||  || |||||||||||||  |||||||||||||||||| ||||||||| ||| |||||    
T  42860345 gataacctacttgagttggcctggtgatattgacttgagacctgggagtgtgctcctcctcgaggtctcaagttcgattc 42860424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 199 - 289
Target Start/End: Original strand, 18259730 - 18259820
Alignment:
Q  199 aacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaat 289  Q
    |||||| ||| ||||| ||  |||||||| ||||||||||| |||||||||||||||  |||||||| |||  | |||| |||||||||||    
T  18259730 aacccatttgagttggcctggtggtattggcttgagatttgagagtgtgctcctcctataggtctcaggttcaactctctccagtgtcaat 18259820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 199 - 277
Target Start/End: Original strand, 26545840 - 26545918
Alignment:
Q  199 aacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctc 277  Q
    ||||||||||||||||| |  |||||||  |||| ||| ||| ||||||||||| || ||||||||| |||||||||||    
T  26545840 aacccacttgggttggtttggtggtattagcttgggatctggaagtgtgctccttctcgaggtctcaagtttgattctc 26545918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 197 - 274
Target Start/End: Original strand, 13803493 - 13803570
Alignment:
Q  197 ataacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgatt 274  Q
    |||||||| |||||||| |||| || ||||| ||||||| || ||||||||||||||||  |||||||| ||| ||||    
T  13803493 ataacccatttgggttgatctagtgatattggcttgagacttaggagtgtgctcctcctcaaggtctcaggttcgatt 13803570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 200 - 277
Target Start/End: Complemental strand, 16918653 - 16918576
Alignment:
Q  200 acccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctc 277  Q
    ||||||||||||||| ||| ||||||||  ||| ||| ||||||||||||||||||  |||||| | ||| |||||||    
T  16918653 acccacttgggttggcctagtggtattggtttgggatctgggagtgtgctcctcctcaaggtcttaggttggattctc 16918576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 199 - 292
Target Start/End: Original strand, 19322768 - 19322861
Alignment:
Q  199 aacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaatttg 292  Q
    ||||||||||||||| |||| ||||||||  ||| ||  |||||||||||||||| |  |||||||  ||||||||||| | |||| |||||||    
T  19322768 aacccacttgggttgatctagtggtattggtttgggacctgggagtgtgctcctcttcaaggtctctggtttgattctctctagtgccaatttg 19322861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 198 - 295
Target Start/End: Complemental strand, 23052600 - 23052503
Alignment:
Q  198 taacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaatttgggt 295  Q
    |||||||||| |||||| ||  |||||||| |||| || ||||||||||||| |||||  |||||||| ||| ||||||| | |||| || |||||||    
T  23052600 taacccacttaggttggcctggtggtattggcttgggacttgggagtgtgcttctcctcaaggtctcaggttcgattctccctagtgccagtttgggt 23052503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 295
Target Start/End: Original strand, 1435064 - 1435159
Alignment:
Q  199 aacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaatttgggt 295  Q
    ||||||||||||||||  || ||||| || |||| ||||| |||||||||| |||||  |||||||| ||| ||||||| |  ||||||||||||||    
T  1435064 aacccacttgggttggcatagtggtactggcttgggatttaggagtgtgcttctcctcaaggtctca-gttcgattctctctggtgtcaatttgggt 1435159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 295
Target Start/End: Original strand, 37480075 - 37480171
Alignment:
Q  199 aacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaatttgggt 295  Q
    |||||||||||||||| ||  |||||||| |||| ||  || |||||||||||||||  |||||||| ||| ||||||| || ||  ||||||||||    
T  37480075 aacccacttgggttggcctggtggtattggcttgggacctgagagtgtgctcctcctcaaggtctcaggttcgattctccccggtcccaatttgggt 37480171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 244 - 291
Target Start/End: Complemental strand, 8162096 - 8162049
Alignment:
Q  244 tgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaattt 291  Q
    |||| ||||||||||||||||| ||| ||||||| |||||||||||||    
T  8162096 tgtgttcctccttgaggtctcaagttggattctctccagtgtcaattt 8162049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 200 - 255
Target Start/End: Complemental strand, 23465996 - 23465941
Alignment:
Q  200 acccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctcct 255  Q
    ||||| ||||||||||||||||||||||  ||  ||||||||||| ||||||||||    
T  23465996 acccatttgggttggtctaatggtattggtttaggatttgggagtatgctcctcct 23465941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 241 - 308
Target Start/End: Original strand, 33582015 - 33582082
Alignment:
Q  241 gagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaatttgggtagaataatatagc 308  Q
    ||||||||||||||||||||||||| ||| ||||||| | | ||||||||| ||| || |||| ||||    
T  33582015 gagtgtgctcctccttgaggtctcaggttcgattctctctaatgtcaatttaggtggactaatttagc 33582082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 220 - 295
Target Start/End: Original strand, 42222902 - 42222977
Alignment:
Q  220 tggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaatttgggt 295  Q
    |||||||||| |||||| ||| ||||||||||| ||||| |||| | ||| |||||||  | ||||||||||||||    
T  42222902 tggtattgacctgagatatggaagtgtgctccttcttgaagtcttaggttcgattctcttcggtgtcaatttgggt 42222977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 264
Target Start/End: Complemental strand, 7667542 - 7667480
Alignment:
Q  202 ccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctc 264  Q
    |||||||||||||||   || ||||| |||| || ||||||||||||||||||||||| ||||    
T  7667542 ccacttgggttggtcgggtgatattggcttgggacttgggagtgtgctcctccttgagatctc 7667480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 199 - 265
Target Start/End: Original strand, 14500277 - 14500343
Alignment:
Q  199 aacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctca 265  Q
    ||||||||||| |||| ||| ||||||   |||||||| ||||||||||||||||||  ||||||||    
T  14500277 aacccacttggtttggcctagtggtataagcttgagatctgggagtgtgctcctcctctaggtctca 14500343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 199 - 293
Target Start/End: Complemental strand, 21195752 - 21195658
Alignment:
Q  199 aacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaatttgg 293  Q
    |||||| ||||||||  ||| |||||| | ||||  | |||||||||||||||||||  |||||||| ||| ||||| | | |||||||||||||    
T  21195752 aacccatttgggttgccctagtggtataggcttggaacttgggagtgtgctcctcctcaaggtctcaggttcgattccctctagtgtcaatttgg 21195658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 206 - 276
Target Start/End: Original strand, 34310758 - 34310828
Alignment:
Q  206 ttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattct 276  Q
    |||||||||| |  ||||||||| ||||||||| ||||||||||| || ||||||||| | |||| |||||    
T  34310758 ttgggttggttttgtggtattgatttgagatttaggagtgtgctcttctttgaggtctaaagtttaattct 34310828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 291
Target Start/End: Original strand, 7415998 - 7416087
Alignment:
Q  202 ccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaattt 291  Q
    |||||||||||| |||| |||||||||||||  || ||  |||||| |||| ||  |||| ||||||||||||||| | | |||||||||    
T  7415998 ccacttgggttgatctagtggtattgacttgtaatctgtaagtgtgttccttctcaaggtttcatgtttgattctctcaaatgtcaattt 7416087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 206 - 291
Target Start/End: Complemental strand, 17737692 - 17737608
Alignment:
Q  206 ttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaattt 291  Q
    |||||||||| || ||||||||  ||| || |||||||||||||||||||  |||||||||||| |||| || | |||| ||||||    
T  17737692 ttgggttggt-tagtggtattggtttgtgacttgggagtgtgctcctcctcaaggtctcatgttcgattatccctagtgccaattt 17737608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 206 - 255
Target Start/End: Original strand, 41202257 - 41202306
Alignment:
Q  206 ttgggttggtctaatggtattgacttgagatttgggagtgtgctcctcct 255  Q
    ||||||||||||  |||||||||| |||||| ||||||| ||||||||||    
T  41202257 ttgggttggtctggtggtattgacctgagatctgggagtatgctcctcct 41202306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 206 - 277
Target Start/End: Complemental strand, 13519122 - 13519050
Alignment:
Q  206 ttgggttggtctaatggtattgacttgagatttgggag-tgtgctcctccttgaggtctcatgtttgattctc 277  Q
    ||||||||| ||| ||||||||  |||  ||||||| | |||||||||||||||||||||| ||| |||||||    
T  13519122 ttgggttggcctagtggtattggtttggaatttggggggtgtgctcctccttgaggtctcaagttcgattctc 13519050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 295
Target Start/End: Original strand, 18372282 - 18372358
Alignment:
Q  219 atggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaatttgggt 295  Q
    |||||||||||||||||  || |||| ||||| |||| ||||||| | ||||||||||| || | | ||||||||||    
T  18372282 atggtattgacttgagacctgagagtatgctcatcctcgaggtcttaggtttgattctctccggagccaatttgggt 18372358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 199 - 235
Target Start/End: Complemental strand, 36317467 - 36317431
Alignment:
Q  199 aacccacttgggttggtctaatggtattgacttgaga 235  Q
    ||||||||||||||||||| ||||| |||||||||||    
T  36317467 aacccacttgggttggtctgatggtgttgacttgaga 36317431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 199 - 255
Target Start/End: Original strand, 42922414 - 42922470
Alignment:
Q  199 aacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctcct 255  Q
    |||||||||||||||| ||| |||||||| ||||  |  ||||||||||||||||||    
T  42922414 aacccacttgggttggcctagtggtattggcttggaacctgggagtgtgctcctcct 42922470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 57; Significance: 8e-24; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 199 - 295
Target Start/End: Complemental strand, 30883274 - 30883178
Alignment:
Q  199 aacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaatttgggt 295  Q
    |||||||||||||||||||| |||||||| |||| ||  ||||||||||||||||||  |||||||| |||  ||||||||||||||||||||||||    
T  30883274 aacccacttgggttggtctagtggtattggcttgggacctgggagtgtgctcctcctcaaggtctcaagttcaattctcaccagtgtcaatttgggt 30883178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 198 - 274
Target Start/End: Complemental strand, 8278352 - 8278276
Alignment:
Q  198 taacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgatt 274  Q
    |||||||||||||||||||| ||||||||| |||| || ||||||||||||||||||| ||| ||||| ||||||||    
T  8278352 taacccacttgggttggtctgatggtattggcttgggacttgggagtgtgctcctcctcgagatctcaagtttgatt 8278276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 198 - 277
Target Start/End: Complemental strand, 14495882 - 14495803
Alignment:
Q  198 taacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctc 277  Q
    ||||||| ||||||||||||  ||||||||||||| ||| |||||||||||||||||| |||||||||  ||||||||||    
T  14495882 taacccatttgggttggtctggtggtattgacttgggatctgggagtgtgctcctcctcgaggtctcagatttgattctc 14495803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 198 - 277
Target Start/End: Original strand, 29075780 - 29075859
Alignment:
Q  198 taacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctc 277  Q
    ||||||||||||||| | ||| |||||||| |||| ||| |||||||||||||||||| ||| ||||||||| |||||||    
T  29075780 taacccacttgggtttgcctagtggtattggcttgggatctgggagtgtgctcctcctcgagatctcatgttcgattctc 29075859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 199 - 277
Target Start/End: Original strand, 16773807 - 16773885
Alignment:
Q  199 aacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctc 277  Q
    |||||||||| ||||||||  ||||||||||||| ||  |||||||||||||||||| ||||||||| ||| |||||||    
T  16773807 aacccacttgagttggtctggtggtattgacttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctc 16773885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 198 - 292
Target Start/End: Original strand, 25627056 - 25627150
Alignment:
Q  198 taacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaatttg 292  Q
    ||||||||||||||||| ||| |||||||| ||||  | |||||||||||||||||||  |||||||| ||| ||||||| |  |||||||||||    
T  25627056 taacccacttgggttggcctagtggtattggcttggaacttgggagtgtgctcctcctcaaggtctcaggttcgattctctctggtgtcaatttg 25627150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 199 - 292
Target Start/End: Complemental strand, 87499 - 87407
Alignment:
Q  199 aacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaatttg 292  Q
    ||||||||| |||||| ||| |||||||| ||||  || ||||||||||||||||||  |||||||| ||||||||| | ||||||||||||||    
T  87499 aacccacttcggttggcctagtggtattgccttggaatctgggagtgtgctcctcctcaaggtctcaggtttgattc-ctccagtgtcaatttg 87407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 195 - 291
Target Start/End: Complemental strand, 17028344 - 17028248
Alignment:
Q  195 tgataacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaattt 291  Q
    |||||||||||||||||||  ||| | ||||||  ||| || |||||||||||||||||||  |||||||| ||||||||| | | |||||||||||    
T  17028344 tgataacccacttgggttgacctagttgtattgggttgggacttgggagtgtgctcctcctcaaggtctcaggtttgattccctctagtgtcaattt 17028248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 206 - 265
Target Start/End: Complemental strand, 1410728 - 1410669
Alignment:
Q  206 ttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctca 265  Q
    ||||||||||||  ||||||||||||| ||| |||||||||||||||||| |||||||||    
T  1410728 ttgggttggtctggtggtattgacttgggatatgggagtgtgctcctcctcgaggtctca 1410669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 203 - 265
Target Start/End: Complemental strand, 43241754 - 43241692
Alignment:
Q  203 cacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctca 265  Q
    |||||||||||||||| ||||||||||||| ||| | ||||||||| | ||||||||||||||    
T  43241754 cacttgggttggtctagtggtattgacttgggatcttggagtgtgcccttccttgaggtctca 43241692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 199 - 292
Target Start/End: Complemental strand, 21549213 - 21549120
Alignment:
Q  199 aacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaatttg 292  Q
    |||||||||||||||| ||| |||||||| |||| ||  ||||||||||||||||||| | |||||| ||| |||| || | |||| |||||||    
T  21549213 aacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctccttaaagtctcaagttcgattttctctagtgccaatttg 21549120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 203 - 256
Target Start/End: Original strand, 24652872 - 24652925
Alignment:
Q  203 cacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctcctt 256  Q
    ||||||| |||||||  |||||||||||||||||||||||||||| ||||||||    
T  24652872 cacttggattggtctggtggtattgacttgagatttgggagtgtgttcctcctt 24652925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 199 - 291
Target Start/End: Complemental strand, 22020938 - 22020846
Alignment:
Q  199 aacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaattt 291  Q
    ||||| ||||||||||  || |||||||  |||| ||| ||||||||||||||||||||| ||||||  || ||||||| ||||||| |||||    
T  22020938 aaccctcttgggttggcatagtggtattagcttgggatctgggagtgtgctcctccttgaagtctcagattcgattctctccagtgttaattt 22020846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 199 - 275
Target Start/End: Complemental strand, 30109384 - 30109308
Alignment:
Q  199 aacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattc 275  Q
    ||||||||||||||||  |  |||||||| |||| ||  |||||||||||||||||||||||||||| ||| |||||    
T  30109384 aacccacttgggttggcttggtggtattggcttgtgacctgggagtgtgctcctccttgaggtctcaggttcgattc 30109308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 198 - 245
Target Start/End: Complemental strand, 3252366 - 3252319
Alignment:
Q  198 taacccacttgggttggtctaatggtattgacttgagatttgggagtg 245  Q
    ||||||||||||||||| ||| |||||||||||||||| |||||||||    
T  3252366 taacccacttgggttggcctagtggtattgacttgagacttgggagtg 3252319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 199 - 254
Target Start/End: Original strand, 22737082 - 22737137
Alignment:
Q  199 aacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctcc 254  Q
    |||||||||||||||||||| |||||||| |||| || |||| |||||||||||||    
T  22737082 aacccacttgggttggtctagtggtattggcttgggacttggaagtgtgctcctcc 22737137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 199 - 277
Target Start/End: Original strand, 34984806 - 34984884
Alignment:
Q  199 aacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctc 277  Q
    |||||||||||||||||||| |||||||| ||||  |  ||||||||||||||||||  |||||| | ||| |||||||    
T  34984806 aacccacttgggttggtctagtggtattggcttggaacctgggagtgtgctcctcctcaaggtcttaggttcgattctc 34984884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 198 - 263
Target Start/End: Original strand, 6844728 - 6844793
Alignment:
Q  198 taacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtct 263  Q
    ||||||||||||||||| |   |||||||||||||  ||||||||||||| ||||||| |||||||    
T  6844728 taacccacttgggttggccaggtggtattgacttggaatttgggagtgtgttcctcctcgaggtct 6844793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 238 - 291
Target Start/End: Original strand, 12883879 - 12883932
Alignment:
Q  238 tgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaattt 291  Q
    ||||||||||||||||||||||||||||||||  |||||| ||| | |||||||    
T  12883879 tgggagtgtgctcctccttgaggtctcatgttcaattctctccaatatcaattt 12883932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 203 - 292
Target Start/End: Original strand, 16436622 - 16436709
Alignment:
Q  203 cacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaatttg 292  Q
    |||||||||||| ||| |||||||| |||| || |||| ||||||||||||||  |||||||||||| |||| ||| |||| ||||||||    
T  16436622 cacttgggttggcctagtggtattggcttgggacttgg-agtgtgctcctcctcaaggtctcatgttcgattttca-cagtatcaatttg 16436709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 198 - 255
Target Start/End: Complemental strand, 41797889 - 41797832
Alignment:
Q  198 taacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctcct 255  Q
    |||||||||| |||||||||||| |||||| |||||||| || || ||||||||||||    
T  41797889 taacccactttggttggtctaattgtattggcttgagatctgagaatgtgctcctcct 41797832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 295
Target Start/End: Complemental strand, 29692462 - 29692366
Alignment:
Q  199 aacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaatttgggt 295  Q
    |||||| ||||||||||||  ||||||||  ||| ||| ||||||||||||||||||  | |||||| |||| |||||| ||  || ||||||||||    
T  29692462 aacccatttgggttggtctggtggtattggattgggatctgggagtgtgctcctcctcaaagtctcaggtttaattctctccgatgccaatttgggt 29692366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 220 - 303
Target Start/End: Complemental strand, 19949670 - 19949588
Alignment:
Q  220 tggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaatttgggtagaataat 303  Q
    ||||||||||||||||| | | |||||||||||||| ||| ||||| |||  ||| ||||| |||||||||||| |||| ||||    
T  19949670 tggtattgacttgagatctag-agtgtgctcctcctcgagctctcaggttcaattttcaccggtgtcaatttggatagactaat 19949588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 199 - 277
Target Start/End: Complemental strand, 36958198 - 36958120
Alignment:
Q  199 aacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctc 277  Q
    ||||||||||||||| | |  ||| |||| ||||||||||||||||||| ||||| | || |||||| ||| |||||||    
T  36958198 aacccacttgggttgatatggtgggattggcttgagatttgggagtgtgttcctcatcgaagtctcaggttcgattctc 36958120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 199 - 265
Target Start/End: Complemental strand, 40461689 - 40461623
Alignment:
Q  199 aacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctca 265  Q
    ||||||||||||||| |||  ||||||| |||||||| ||| ||||||||| |||||  ||||||||    
T  40461689 aacccacttgggttgatctggtggtattaacttgagacttgagagtgtgcttctcctcaaggtctca 40461623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 264
Target Start/End: Complemental strand, 9842898 - 9842857
Alignment:
Q  223 tattgacttgagatttgggagtgtgctcctccttgaggtctc 264  Q
    |||||||||| || ||||||||||||||||||| ||||||||    
T  9842898 tattgacttgggacttgggagtgtgctcctcctcgaggtctc 9842857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 292
Target Start/End: Original strand, 16457810 - 16457903
Alignment:
Q  199 aacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaatttg 292  Q
    ||||||||| |||||| ||  |||||||| |||| ||  | ||||||||||||||||  ||||||||||||  |||||| || ||| |||||||    
T  16457810 aacccacttaggttggcctggtggtattggcttgggaccttggagtgtgctcctcctcaaggtctcatgttcaattctccccggtgccaatttg 16457903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 292
Target Start/End: Complemental strand, 26078127 - 26078034
Alignment:
Q  199 aacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaatttg 292  Q
    |||||||||||||||| ||| ||||||||  ||| || |||||||| |||| ||| |  |||||||| ||| ||||||| | |||| |||||||    
T  26078127 aacccacttgggttggcctagtggtattggtttgggacttgggagtatgcttctcttcaaggtctcaggttcgattctctctagtgccaatttg 26078034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 293
Target Start/End: Original strand, 43442217 - 43442290
Alignment:
Q  220 tggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaatttgg 293  Q
    ||||||||  ||||||| ||||||||||||||||||  |||||||| ||| ||||||| |   |||||||||||    
T  43442217 tggtattggtttgagatctgggagtgtgctcctcctcaaggtctcaggttcgattctctctgttgtcaatttgg 43442290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 198 - 250
Target Start/End: Complemental strand, 636648 - 636596
Alignment:
Q  198 taacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctc 250  Q
    ||||||| |||| ||||| | |||||||||||||||||| ||| |||||||||    
T  636648 taacccatttggattggtatgatggtattgacttgagatctggaagtgtgctc 636596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 261
Target Start/End: Complemental strand, 40281170 - 40281106
Alignment:
Q  197 ataacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggt 261  Q
    |||||||||||||||||||    ||||||||| ||| ||| || |||||||||||||||| ||||    
T  40281170 ataacccacttgggttggttaggtggtattgatttgggatatgagagtgtgctcctccttaaggt 40281106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 214 - 246
Target Start/End: Original strand, 42346727 - 42346759
Alignment:
Q  214 gtctaatggtattgacttgagatttgggagtgt 246  Q
    |||||||||||||||||||||||||| ||||||    
T  42346727 gtctaatggtattgacttgagatttgtgagtgt 42346759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 54; Significance: 5e-22; HSPs: 52)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 199 - 308
Target Start/End: Complemental strand, 21660220 - 21660111
Alignment:
Q  199 aacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaatttgggtaga 298  Q
    |||| ||||||||||||||  ||||||||||||||||| ||||||||||||| |||| ||||||||| ||| |||| || | ||||||||||| ||||||    
T  21660220 aaccaacttgggttggtctggtggtattgacttgagatctgggagtgtgctcttcctcgaggtctcaagttcgattatctctagtgtcaatttaggtaga 21660121  T
Q  299 ataatatagc 308  Q
     |||| ||||    
T  21660120 ctaatttagc 21660111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 199 - 308
Target Start/End: Complemental strand, 21668984 - 21668875
Alignment:
Q  199 aacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaatttgggtaga 298  Q
    |||| ||||||||||||||  ||||||||||||||||| ||||||||||||| |||| ||||||||| ||| |||| || | ||||||||||| ||||||    
T  21668984 aaccaacttgggttggtctggtggtattgacttgagatctgggagtgtgctcttcctcgaggtctcaagttcgattatctctagtgtcaatttaggtaga 21668885  T
Q  299 ataatatagc 308  Q
     |||| ||||    
T  21668884 ctaatttagc 21668875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 199 - 291
Target Start/End: Original strand, 39509070 - 39509162
Alignment:
Q  199 aacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaattt 291  Q
    ||||||||||||||||||| |||||| || |||| ||| |||||||||||||||||| ||||||||| ||| ||||||| |||||| ||||||    
T  39509070 aacccacttgggttggtctcatggtaatggcttgggatctgggagtgtgctcctcctcgaggtctcaggttcgattctccccagtggcaattt 39509162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 198 - 295
Target Start/End: Complemental strand, 9937038 - 9936941
Alignment:
Q  198 taacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaatttgggt 295  Q
    ||||| ||||||||||| ||| |||||| ||||||||| ||||||||||||||||||| || || ||| ||| ||||||||||  |||||||||||||    
T  9937038 taacctacttgggttggcctagtggtatcgacttgagacttgggagtgtgctcctcctcgaagtttcaggttcgattctcaccgttgtcaatttgggt 9936941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 202 - 289
Target Start/End: Complemental strand, 52254477 - 52254390
Alignment:
Q  202 ccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaat 289  Q
    ||||||| |||||||| |||||||||||||| ||| || ||||||||||||||||||||| ||| ||| ||||||| |||||| ||||    
T  52254477 ccacttgagttggtctgatggtattgacttgggatatgagagtgtgctcctccttgaggtttcaggttagattctctccagtgccaat 52254390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 203 - 265
Target Start/End: Original strand, 13901746 - 13901808
Alignment:
Q  203 cacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctca 265  Q
    |||||||||||||||| |||||||| |||||||  |||||||||| |||||||||||||||||    
T  13901746 cacttgggttggtctagtggtattggcttgagacctgggagtgtgttcctccttgaggtctca 13901808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 203 - 277
Target Start/End: Complemental strand, 43623516 - 43623442
Alignment:
Q  203 cacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctc 277  Q
    |||||||||| ||||| || ||||||||||||||  |||||||||||||||||||| |||||| ||| |||||||    
T  43623516 cacttgggttagtctagtgatattgacttgagatcagggagtgtgctcctccttgaagtctcaggttcgattctc 43623442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 198 - 295
Target Start/End: Complemental strand, 5795486 - 5795389
Alignment:
Q  198 taacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaatttgggt 295  Q
    ||||||||||||||||||||  |||| ||||||||  |  | ||||| ||||||||||  |||||||| ||||||||||| |||||| ||||||||||    
T  5795486 taacccacttgggttggtctggtggtgttgacttggcaccttggagtatgctcctcctcaaggtctcaggtttgattctccccagtgccaatttgggt 5795389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 198 - 295
Target Start/End: Complemental strand, 19238654 - 19238557
Alignment:
Q  198 taacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaatttgggt 295  Q
    ||||||||||||||||| ||  |||||||| |||| || ||||||||||||||||||| ||||||||  ||| ||||||| || ||  ||||||||||    
T  19238654 taacccacttgggttggcctggtggtattggcttgggacttgggagtgtgctcctcctcgaggtctcgggttcgattctccccggtaccaatttgggt 19238557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 198 - 265
Target Start/End: Complemental strand, 31759735 - 31759668
Alignment:
Q  198 taacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctca 265  Q
    |||||||||||||||| |||| |||||||| |||| || |||||||||||||||||||  ||||||||    
T  31759735 taacccacttgggttgatctagtggtattggcttgggacttgggagtgtgctcctcctcaaggtctca 31759668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 198 - 277
Target Start/End: Complemental strand, 37109428 - 37109349
Alignment:
Q  198 taacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctc 277  Q
    ||||||||||||||||| ||| |||||||| |||| ||  ||||||||||||||||||  |||||||| ||| |||||||    
T  37109428 taacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaaggtctcaggttcgattctc 37109349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 224 - 295
Target Start/End: Original strand, 51954139 - 51954210
Alignment:
Q  224 attgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaatttgggt 295  Q
    ||||||||| || |||||||| |||||||||| ||||||||| |||||||| || || ||||||||||||||    
T  51954139 attgacttgggacttgggagtatgctcctcctcgaggtctcaggtttgattatctccggtgtcaatttgggt 51954210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 197 - 295
Target Start/End: Original strand, 28635694 - 28635792
Alignment:
Q  197 ataacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaatttgggt 295  Q
    |||||||||||||||||  ||  ||||| ||||||| ||| |||||||||||||||||| ||||||| | ||| ||||||| |  ||| ||||||||||    
T  28635694 ataacccacttgggttgtcctggtggtactgacttgggatctgggagtgtgctcctcctggaggtcttaggttcgattctctctggtgccaatttgggt 28635792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 197 - 295
Target Start/End: Original strand, 31826607 - 31826705
Alignment:
Q  197 ataacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaatttgggt 295  Q
    |||||||||||||||||  ||| |||||| | |||| |||||| |||||||||||||||  |||||||| ||| ||||| |   |||||||||||||||    
T  31826607 ataacccacttgggttgccctagtggtataggcttgggatttgcgagtgtgctcctcctcaaggtctcaagttcgattccctttagtgtcaatttgggt 31826705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 197 - 291
Target Start/End: Original strand, 47044715 - 47044808
Alignment:
Q  197 ataacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaattt 291  Q
    ||||||||||||| |||| ||  ||||||||||||| ||| || |||| |||||||||| ||||||||| ||| ||||||| |||| ||||||||    
T  47044715 ataacccacttggattggcctggtggtattgacttgggatctgagagtttgctcctcctcgaggtctcaggttcgattctc-ccagcgtcaattt 47044808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 204 - 265
Target Start/End: Original strand, 33755968 - 33756029
Alignment:
Q  204 acttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctca 265  Q
    |||||||||||||||||||| ||| ||||||| |||| |||||||||||  |||||||||||    
T  33755968 acttgggttggtctaatggtgttggcttgagacttggtagtgtgctcctgtttgaggtctca 33756029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 206 - 295
Target Start/End: Complemental strand, 49576963 - 49576874
Alignment:
Q  206 ttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaatttgggt 295  Q
    ||||||||| ||  |||||||| |||  || |||||||||||||||||||  |||||||| ||| ||||||| ||| |||||||||||||    
T  49576963 ttgggttggcctggtggtattggctttggacttgggagtgtgctcctcctcaaggtctcaggttcgattctctccaatgtcaatttgggt 49576874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 202 - 250
Target Start/End: Complemental strand, 3350528 - 3350480
Alignment:
Q  202 ccacttgggttggtctaatggtattgacttgagatttgggagtgtgctc 250  Q
    ||||||| |||||||| |||||||||||||||||||||||| |||||||    
T  3350528 ccacttgagttggtctgatggtattgacttgagatttgggaatgtgctc 3350480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 199 - 295
Target Start/End: Complemental strand, 8030280 - 8030184
Alignment:
Q  199 aacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaatttgggt 295  Q
    ||||||||||| |||  ||| |||||| | |||| || |||||||||||||||||||  |||||||| ||| ||||| | | |||||||||||||||    
T  8030280 aacccacttggattgccctagtggtataggcttgggacttgggagtgtgctcctcctcaaggtctcaagttcgattccctctagtgtcaatttgggt 8030184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 197 - 293
Target Start/End: Original strand, 8306483 - 8306579
Alignment:
Q  197 ataacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaatttgg 293  Q
    |||||||||||| ||||||||  ||| || | |||||||  |||||||||||||||||| || |||| | ||| ||||||| | |||||||||||||    
T  8306483 ataacccacttgagttggtctgttggcatcggcttgagacctgggagtgtgctcctcctcgaagtcttaagttcgattctctctagtgtcaatttgg 8306579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 199 - 291
Target Start/End: Original strand, 51948480 - 51948572
Alignment:
Q  199 aacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaattt 291  Q
    |||||||||||||||  ||  | ||||||||||| ||| | ||||||||| |||||| ||||||||| |||  |||||| |||||||||||||    
T  51948480 aacccacttgggttgtcctggtagtattgacttgggatctaggagtgtgcccctcctcgaggtctcaggttcaattctctccagtgtcaattt 51948572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 220 - 291
Target Start/End: Original strand, 13015448 - 13015519
Alignment:
Q  220 tggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaattt 291  Q
    |||||||| |||| || ||||||||||||||||||| || |||||||||| ||||||| |  ||||||||||    
T  13015448 tggtattggcttgggacttgggagtgtgctcctcctcgaagtctcatgttcgattctctcaggtgtcaattt 13015519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 202 - 293
Target Start/End: Complemental strand, 25869650 - 25869559
Alignment:
Q  202 ccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaatttgg 293  Q
    ||||||||||| || | |||||||||||||||||| || |||||||||||||||  | |||| ||||| ||||||   |||||| |||||||    
T  25869650 ccacttgggttagtttgatggtattgacttgagatctgagagtgtgctcctcctcaaagtcttatgttcgattcttctcagtgttaatttgg 25869559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 199 - 277
Target Start/End: Original strand, 4249177 - 4249255
Alignment:
Q  199 aacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctc 277  Q
    ||||||||| | |||| ||| |||||| | |||| ||||| ||||||||||||||||  |||||||| |||||||||||    
T  4249177 aacccacttcgcttggcctagtggtataggcttgggattttggagtgtgctcctcctcaaggtctcaggtttgattctc 4249255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 202 - 292
Target Start/End: Complemental strand, 7292871 - 7292781
Alignment:
Q  202 ccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaatttg 292  Q
    ||||||||||||||||| |||||||| ||||  |  ||||||||||||||||||  | |||||| ||| ||||||| | |||| |||||||    
T  7292871 ccacttgggttggtctagtggtattggcttggaacctgggagtgtgctcctcctcaaagtctcaggttcgattctctctagtgccaatttg 7292781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 206 - 292
Target Start/End: Original strand, 15729490 - 15729575
Alignment:
Q  206 ttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaatttg 292  Q
    |||||||| | || ||||||||  |||||||| | ||||||||||||||| || |||||| ||| |||||||||| |||||||||||    
T  15729490 ttgggttgatttagtggtattggtttgagatt-gagagtgtgctcctcctcgatgtctcaagttcgattctcaccggtgtcaatttg 15729575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 202 - 276
Target Start/End: Complemental strand, 41347036 - 41346962
Alignment:
Q  202 ccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattct 276  Q
    ||||||||||||| || |||||||||  ||||||| ||||||| |||||||||| || |||||| ||| ||||||    
T  41347036 ccacttgggttggcctgatggtattggtttgagatctgggagtatgctcctcctcgaagtctcaggttcgattct 41346962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 197 - 255
Target Start/End: Original strand, 46545709 - 46545767
Alignment:
Q  197 ataacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctcct 255  Q
    |||||||||||||||||| ||| |||||||| |||||||  || |||||||||||||||    
T  46545709 ataacccacttgggttggcctagtggtattggcttgagacctgagagtgtgctcctcct 46545767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 220 - 269
Target Start/End: Original strand, 17618302 - 17618351
Alignment:
Q  220 tggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtt 269  Q
    |||||||| |||||||  |||||||||||||||||| |||||||||||||    
T  17618302 tggtattggcttgagacctgggagtgtgctcctcctcgaggtctcatgtt 17618351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 203 - 276
Target Start/End: Original strand, 18469501 - 18469574
Alignment:
Q  203 cacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattct 276  Q
    ||||| |||||||||  ||||||| |||||| |||||| || |||||||||||  |||||||||||| ||||||    
T  18469501 cactttggttggtcttgtggtattaacttgaaatttggtagcgtgctcctcctcaaggtctcatgttggattct 18469574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 206 - 295
Target Start/End: Complemental strand, 23284327 - 23284238
Alignment:
Q  206 ttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaatttgggt 295  Q
    |||||||  ||| |||| ||||||||||||| ||  | ||| ||| |||| ||||||||| ||||||||||| ||||||| |||||||||    
T  23284327 ttgggttcatctgatggcattgacttgagatctgaaaatgtactcttcctcgaggtctcaggtttgattctctccagtgttaatttgggt 23284238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 203 - 251
Target Start/End: Original strand, 11418224 - 11418272
Alignment:
Q  203 cacttgggttggtctaatggtattgacttgagatttgggagtgtgctcc 251  Q
    |||||||||||||||| || |||||||||| ||||||| ||||||||||    
T  11418224 cacttgggttggtctagtgatattgacttgggatttggaagtgtgctcc 11418272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 295
Target Start/End: Complemental strand, 51250598 - 51250502
Alignment:
Q  199 aacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaatttgggt 295  Q
    |||||||||||||||| ||  |||||||| |||| ||| |||||||||||||| |||  || ||||| ||| ||||| | || ||| ||||||||||    
T  51250598 aacccacttgggttggcctggtggtattggcttgggatctgggagtgtgctccgcctcaagatctcaagttcgattccctccggtgccaatttgggt 51250502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 202 - 250
Target Start/End: Complemental strand, 51346531 - 51346483
Alignment:
Q  202 ccacttgggttggtctaatggtattgacttgagatttgggagtgtgctc 250  Q
    ||||||||||||| || | ||||||||||||||||||| ||||||||||    
T  51346531 ccacttgggttggcctgacggtattgacttgagatttgagagtgtgctc 51346483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 295
Target Start/End: Complemental strand, 55427276 - 55427180
Alignment:
Q  199 aacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaatttgggt 295  Q
    |||||||||||||||| ||  |||||||| |||| ||  ||||||| ||||||| || ||||||||| ||| |||||||  | ||| ||||||||||    
T  55427276 aacccacttgggttggcctggtggtattggcttgggacctgggagtctgctcctgctcgaggtctcaggttcgattctccgcggtgccaatttgggt 55427180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 199 - 277
Target Start/End: Complemental strand, 27965586 - 27965501
Alignment:
Q  199 aacccacttgggttggtctaatggtattgacttgagatttgggagtgtg-------ctcctccttgaggtctcatgtttgattctc 277  Q
    |||||||||||||||| ||| |||||||| |||| ||| ||||||||||       |||||||||||||||||| ||| |||||||    
T  27965586 aacccacttgggttggcctagtggtattggcttgggatctgggagtgtgcagtggactcctccttgaggtctcaagttcgattctc 27965501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 198 - 253
Target Start/End: Complemental strand, 56236992 - 56236937
Alignment:
Q  198 taacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctc 253  Q
    ||||||| || |||||||||  ||||||||||||| ||| ||||||||||||||||    
T  56236992 taacccaattaggttggtctggtggtattgacttgggatatgggagtgtgctcctc 56236937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 197 - 263
Target Start/End: Complemental strand, 9241103 - 9241037
Alignment:
Q  197 ataacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtct 263  Q
    |||||||||||||||||| ||  |||||||| |||| ||| ||| ||||||||||| || |||||||    
T  9241103 ataacccacttgggttggcctggtggtattggcttgggatctggtagtgtgctcctgctcgaggtct 9241037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 199 - 277
Target Start/End: Original strand, 12798684 - 12798762
Alignment:
Q  199 aacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctc 277  Q
    |||||||||||||||  | | ||||||||  ||||||| |||||||||||| ||||| ||||| ||| ||| |||||||    
T  12798684 aacccacttgggttgaccgagtggtattggtttgagatctgggagtgtgctgctcctcgaggtttcaggttcgattctc 12798762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 199 - 277
Target Start/End: Original strand, 20608922 - 20609000
Alignment:
Q  199 aacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctc 277  Q
    ||||||||||||||| ||| ||||||||| ||||||||  ||||||||| | ||| |  |||||||| ||| |||||||    
T  20608922 aacccacttgggttgatctgatggtattggcttgagatccgggagtgtgtttctcatcaaggtctcaagttcgattctc 20609000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 199 - 265
Target Start/End: Original strand, 24827825 - 24827891
Alignment:
Q  199 aacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctca 265  Q
    ||||||||| ||||||||   ||||||||||||| ||  |||||||| ||||||||| |||||||||    
T  24827825 aacccactttggttggtccggtggtattgacttgggacctgggagtgcgctcctcctcgaggtctca 24827891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 213 - 291
Target Start/End: Complemental strand, 30938281 - 30938203
Alignment:
Q  213 ggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaattt 291  Q
    |||||| ||||||||  ||| ||| | |||||||||||||||| ||||||||| ||| ||||||| ||| || ||||||    
T  30938281 ggtctagtggtattggtttgggatcttggagtgtgctcctcctcgaggtctcaggttcgattctccccaatgccaattt 30938203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 198 - 295
Target Start/End: Complemental strand, 8325456 - 8325359
Alignment:
Q  198 taacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaatttgggt 295  Q
    ||||||||||||||||| |   |||| ||| |||||||  | ||||||||||| ||||  |||||| | ||| ||||||| || ||||||||||||||    
T  8325456 taacccacttgggttgggccggtggtgttggcttgagaccttggagtgtgctcatcctcaaggtcttaggttcgattctccccggtgtcaatttgggt 8325359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 277
Target Start/End: Complemental strand, 21404872 - 21404819
Alignment:
Q  224 attgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctc 277  Q
    ||||||||||||  || |||| ||||||||||  ||||||||||||||||||||    
T  21404872 attgacttgagacctgagagtatgctcctcctcaaggtctcatgtttgattctc 21404819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 263
Target Start/End: Complemental strand, 24124108 - 24124067
Alignment:
Q  222 gtattgacttgagatttgggagtgtgctcctccttgaggtct 263  Q
    |||||| |||| |||||||||||||| |||||||||||||||    
T  24124108 gtattggcttgggatttgggagtgtggtcctccttgaggtct 24124067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 198 - 295
Target Start/End: Original strand, 46295096 - 46295193
Alignment:
Q  198 taacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaatttgggt 295  Q
    |||||||||| |||||||||  | || ||| |||| ||  | ||||||||||||||||  |||||||| ||| ||||||| || ||| ||||||||||    
T  46295096 taacccacttaggttggtctggtagtgttggcttgggacattggagtgtgctcctcctcaaggtctcaggttcgattctccccggtgccaatttgggt 46295193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 199 - 291
Target Start/End: Complemental strand, 7949530 - 7949438
Alignment:
Q  199 aacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaattt 291  Q
    |||||||||||| ||| |||  ||||||| |||| ||  | ||||||||||||||||  |||||||| ||| ||||||| |  ||||||||||    
T  7949530 aacccacttgggctggcctagcggtattggcttgggacctcggagtgtgctcctcctcaaggtctcaggttcgattctctctggtgtcaattt 7949438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 205 - 277
Target Start/End: Original strand, 13215091 - 13215163
Alignment:
Q  205 cttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctc 277  Q
    ||||||||| |||| | ||||||  ||||||| || ||||||||| ||| | ||||||||| |||||||||||    
T  13215091 cttgggttgatctagtagtattggtttgagatctgtgagtgtgcttctcttcgaggtctcaagtttgattctc 13215163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 198 - 294
Target Start/End: Original strand, 20216110 - 20216206
Alignment:
Q  198 taacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaatttggg 294  Q
    |||||||||||||||| ||  ||| |||||  |||||| ||| ||||||| | |||||  | |||||||||| ||||||  ||| ||||||||||||    
T  20216110 taacccacttgggttgatcagatgatattggtttgagacttgagagtgtgtttctcctcaaagtctcatgttcgattctttccaatgtcaatttggg 20216206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 199 - 291
Target Start/End: Original strand, 21344817 - 21344908
Alignment:
Q  199 aacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaattt 291  Q
    |||||||||||||||| || ||| | ||| |||| ||  | |||||||||||||| |  ||||||||||||  |||||| |||||||||||||    
T  21344817 aacccacttgggttggcctgatgatgttggcttgggaccttggagtgtgctcctc-tcaaggtctcatgttcaattctccccagtgtcaattt 21344908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 292
Target Start/End: Original strand, 32992653 - 32992705
Alignment:
Q  240 ggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaatttg 292  Q
    ||||||||||||||||  |||||||| ||| ||||||| || |||||||||||    
T  32992653 ggagtgtgctcctcctcaaggtctcaagttcgattctccccggtgtcaatttg 32992705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 210 - 274
Target Start/End: Complemental strand, 44491457 - 44491393
Alignment:
Q  210 gttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgatt 274  Q
    |||||| | ||| |||||||||||||||| |||  |||||||||| |||||| ||| ||||||||    
T  44491457 gttggtttgatgatattgacttgagatttaggatggtgctcctccatgaggtttcaggtttgatt 44491393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 54; Significance: 5e-22; HSPs: 67)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 199 - 308
Target Start/End: Original strand, 25297772 - 25297881
Alignment:
Q  199 aacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaatttgggtaga 298  Q
    |||||||||||||||||||| ||||||||||||  ||| || ||||||||||||||| ||||||| | |||||||||||||| | |||||||| ||| |     
T  25297772 aacccacttgggttggtctagtggtattgacttaggatctgagagtgtgctcctcctcgaggtctgaggtttgattctcaccggcgtcaatttaggtggg 25297871  T
Q  299 ataatatagc 308  Q
    ||||| ||||    
T  25297872 ataatttagc 25297881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 203 - 291
Target Start/End: Complemental strand, 24047174 - 24047086
Alignment:
Q  203 cacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaattt 291  Q
    ||||||||||||||| ||||||||| ||||||| ||||||||||||||||||| ||||| ||| ||| ||||||| |||||| ||||||    
T  24047174 cacttgggttggtctcatggtattggcttgagacttgggagtgtgctcctcctcgaggtttcaagttcgattctccccagtgccaattt 24047086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 199 - 295
Target Start/End: Original strand, 51814494 - 51814590
Alignment:
Q  199 aacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaatttgggt 295  Q
    |||||||||||||||| || |||||||||||||||||| || |||||||||||||||  |||||||| ||| ||||||| || ||| ||||||||||    
T  51814494 aacccacttgggttggcctgatggtattgacttgagatctgagagtgtgctcctcctcaaggtctcaggttcgattctctccggtgccaatttgggt 51814590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 199 - 295
Target Start/End: Original strand, 12259260 - 12259356
Alignment:
Q  199 aacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaatttgggt 295  Q
    ||||||||||||||||  || || |||| ||||| |||||||||||||||||||||| || |||||| ||| ||||||||||  |||||||||||||    
T  12259260 aacccacttgggttggcatagtgatattaacttgggatttgggagtgtgctcctcctcgaagtctcaagttcgattctcaccgatgtcaatttgggt 12259356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 198 - 292
Target Start/End: Original strand, 16893393 - 16893487
Alignment:
Q  198 taacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaatttg 292  Q
    ||||||||||||||||  ||  |||||||| |||||||||||||||||| |||||||| ||||||||| ||| |||| || || |||||||||||    
T  16893393 taacccacttgggttgacctgttggtattggcttgagatttgggagtgtactcctcctcgaggtctcaggttcgattttctccggtgtcaatttg 16893487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 238 - 291
Target Start/End: Original strand, 17439956 - 17440009
Alignment:
Q  238 tgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaattt 291  Q
    |||||||||||||||||| ||||||||||||||||||||| |||||||||||||    
T  17439956 tgggagtgtgctcctcctcgaggtctcatgtttgattctctccagtgtcaattt 17440009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 202 - 263
Target Start/End: Complemental strand, 26232459 - 26232398
Alignment:
Q  202 ccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtct 263  Q
    ||||||||||||||||| |||||||| |||||||| ||||||||||||||| ||||||||||    
T  26232459 ccacttgggttggtctagtggtattggcttgagatctgggagtgtgctcctgcttgaggtct 26232398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 199 - 295
Target Start/End: Original strand, 40257399 - 40257495
Alignment:
Q  199 aacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaatttgggt 295  Q
    |||||||||||||||| ||  |||||||| |||||||  |||||||||||||||||| ||||||||| |||  |||||  || ||||||||||||||    
T  40257399 aacccacttgggttggcctggtggtattggcttgagacctgggagtgtgctcctcctcgaggtctcaagttcaattctatccggtgtcaatttgggt 40257495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 200 - 277
Target Start/End: Complemental strand, 18459307 - 18459229
Alignment:
Q  200 acccacttgggttggtctaatggta-ttgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctc 277  Q
    ||||||||||||||||||| ||||| ||| |||| || ||||||||||||||||||||||||||| |  ||||||||||    
T  18459307 acccacttgggttggtctagtggtaattggcttgggacttgggagtgtgctcctccttgaggtcttagatttgattctc 18459229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 198 - 295
Target Start/End: Original strand, 44961764 - 44961861
Alignment:
Q  198 taacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaatttgggt 295  Q
    |||||||||||||||||||   |||||||  ||||||||||  |||||||||||||||   ||||||| ||| ||||||| | |||||||||||||||    
T  44961764 taacccacttgggttggtcaggtggtattagcttgagatttaagagtgtgctcctcctcagggtctcaggttcgattctctctagtgtcaatttgggt 44961861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 202 - 277
Target Start/End: Complemental strand, 15786393 - 15786318
Alignment:
Q  202 ccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctc 277  Q
    ||||||||||||||||| | |||||| |||| ||| ||||||||||||||||||  |||||||| ||| |||||||    
T  15786393 ccacttgggttggtctagtagtattggcttgggatctgggagtgtgctcctcctcaaggtctcaggttcgattctc 15786318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 199 - 277
Target Start/End: Original strand, 8904414 - 8904492
Alignment:
Q  199 aacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctc 277  Q
    |||||||||||||||| ||| | ||||||||||| ||| || |||||||||||||||  |||||||| ||| |||||||    
T  8904414 aacccacttgggttggcctagtagtattgacttgggatatgtgagtgtgctcctcctcaaggtctcaagttcgattctc 8904492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 198 - 276
Target Start/End: Complemental strand, 11438561 - 11438483
Alignment:
Q  198 taacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattct 276  Q
    ||||||||||| |||||||| |||||||||||||| |||||  ||||||| |||||||  | |||||||||| ||||||    
T  11438561 taacccacttgagttggtctgatggtattgacttgcgatttaagagtgtgatcctcctcaaagtctcatgttcgattct 11438483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 199 - 265
Target Start/End: Complemental strand, 45235455 - 45235389
Alignment:
Q  199 aacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctca 265  Q
    ||||||||||||||||||| |||||||||  ||| || ||||||||||||||||||| ||| |||||    
T  45235455 aacccacttgggttggtctgatggtattggtttgggacttgggagtgtgctcctcctcgagatctca 45235389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 291
Target Start/End: Original strand, 12370202 - 12370255
Alignment:
Q  238 tgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaattt 291  Q
    |||||||||||||||||| ||||||||||||||||||||| || || |||||||    
T  12370202 tgggagtgtgctcctcctcgaggtctcatgtttgattctctccggtatcaattt 12370255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 198 - 291
Target Start/End: Complemental strand, 17745333 - 17745240
Alignment:
Q  198 taacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaattt 291  Q
    |||| |||||||||||| ||| |||||||| |||| ||  || | ||||||||||||| ||||||||||||| ||||||| |  ||||||||||    
T  17745333 taacgcacttgggttggcctagtggtattggcttgggacctgagcgtgtgctcctcctcgaggtctcatgttcgattctctctggtgtcaattt 17745240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 202 - 295
Target Start/End: Original strand, 24730387 - 24730480
Alignment:
Q  202 ccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaatttgggt 295  Q
    ||||||||||||| ||| |||||||| |||||||| |||||||||||||||| |  ||||| || ||||||| |||  | ||| ||||||||||    
T  24730387 ccacttgggttggcctagtggtattgtcttgagatctgggagtgtgctcctcttcaaggtcccaggtttgatcctcctcggtgccaatttgggt 24730480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 198 - 291
Target Start/End: Original strand, 30689011 - 30689104
Alignment:
Q  198 taacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaattt 291  Q
    |||||||||| |||||  || ||||||||| |||  ||  ||||||| ||||||||||||||||||||||||  |||||| |||||| ||||||    
T  30689011 taacccacttaggttgccctgatggtattggcttaggacctgggagtttgctcctccttgaggtctcatgttcaattctccccagtgccaattt 30689104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 200 - 297
Target Start/End: Original strand, 44126396 - 44126493
Alignment:
Q  200 acccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaatttgggtag 297  Q
    ||||||||||||||| ||  |||||||||| || ||  |||||||||||||||||  |||||||||  |||||||||| | |||| |||||| |||||    
T  44126396 acccacttgggttggcctggtggtattgacctgggacctgggagtgtgctcctccacgaggtctcagatttgattctctctagtgccaatttaggtag 44126493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 199 - 295
Target Start/End: Original strand, 6122794 - 6122890
Alignment:
Q  199 aacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaatttgggt 295  Q
    |||||| ||||||||  ||| |||||| | |||| || |||||||||||||||||||  |||||||| ||| ||||| | | |||||||||||||||    
T  6122794 aacccatttgggttgccctagtggtataggcttgggacttgggagtgtgctcctcctcaaggtctcaggttcgattccctctagtgtcaatttgggt 6122890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 199 - 255
Target Start/End: Complemental strand, 31794340 - 31794284
Alignment:
Q  199 aacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctcct 255  Q
    |||||||||||||||| ||| |||||||| |||| || |||||||||||||||||||    
T  31794340 aacccacttgggttggcctagtggtattggcttgggacttgggagtgtgctcctcct 31794284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 201 - 277
Target Start/End: Complemental strand, 33700847 - 33700771
Alignment:
Q  201 cccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctc 277  Q
    |||||||||||||| ||| |||||||| ||||  || ||||||||||||||||||  |||||||| ||| |||||||    
T  33700847 cccacttgggttggcctagtggtattggcttggaatctgggagtgtgctcctcctcaaggtctcaggttcgattctc 33700771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 199 - 274
Target Start/End: Original strand, 521218 - 521293
Alignment:
Q  199 aacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgatt 274  Q
    ||||||||||| |||  ||| || ||||||||||||||||||| |||||||||||||| | |||||| ||| ||||    
T  521218 aacccacttggattgacctactgatattgacttgagatttgggggtgtgctcctccttaaagtctcaggttcgatt 521293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 198 - 277
Target Start/End: Complemental strand, 4280528 - 4280449
Alignment:
Q  198 taacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctc 277  Q
    ||||||||||||||| || | ||| |||||||||| || ||| ||||||||| |||||  |||||||| |||||||||||    
T  4280528 taacccacttgggttagtatgatgatattgacttgggacttgagagtgtgcttctcctgaaggtctcaggtttgattctc 4280449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 199 - 274
Target Start/End: Original strand, 12662282 - 12662357
Alignment:
Q  199 aacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgatt 274  Q
    |||| |||||||||||||| |||||||||||||| |||  || |||||||||||||| || |||||| ||| ||||    
T  12662282 aacctacttgggttggtctgatggtattgacttgtgatacggaagtgtgctcctcctcgatgtctcaggttcgatt 12662357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 199 - 277
Target Start/End: Original strand, 2799862 - 2799940
Alignment:
Q  199 aacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctc 277  Q
    ||||||||| | |||| ||| |||||| | |||||||| ||||||||||||||||||  |||||||| ||| |||||||    
T  2799862 aacccacttcgcttggcctagtggtataggcttgagatctgggagtgtgctcctcctcaaggtctcaggttcgattctc 2799940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 205 - 291
Target Start/End: Complemental strand, 6948147 - 6948061
Alignment:
Q  205 cttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaattt 291  Q
    ||||||||||||   |||||||   |||| || |||||||||||| ||||| |||||||||||||  ||||||||| ||||||||||    
T  6948147 cttgggttggtcgggtggtattagtttgacatctgggagtgtgctgctcctcgaggtctcatgttcaattctcaccggtgtcaattt 6948061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 197 - 255
Target Start/End: Complemental strand, 9165273 - 9165215
Alignment:
Q  197 ataacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctcct 255  Q
    |||||||||||||||||| ||| |||||||| |||| ||  ||||||||||||||||||    
T  9165273 ataacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcct 9165215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 203 - 277
Target Start/End: Original strand, 9224779 - 9224853
Alignment:
Q  203 cacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctc 277  Q
    |||||||||||||||  ||||||||  ||||||| || |||| |||| ||||||||||||||| ||| |||||||    
T  9224779 cacttgggttggtctggtggtattgctttgagatctgagagtatgcttctccttgaggtctcaggttcgattctc 9224853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 199 - 269
Target Start/End: Complemental strand, 11687700 - 11687630
Alignment:
Q  199 aacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtt 269  Q
    |||||||||||||||||| | ||| ||||||||| ||| ||| |||||||||||  | |||||||||||||    
T  11687700 aacccacttgggttggtccagtggcattgacttgggatctggaagtgtgctccttttcgaggtctcatgtt 11687630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 199 - 293
Target Start/End: Original strand, 37400274 - 37400368
Alignment:
Q  199 aacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaatttgg 293  Q
    |||| ||||||||||||||  |||||||| |||||||  ||  ||||||||||||||| |||||||| ||| ||||||  || ||| ||||||||    
T  37400274 aaccaacttgggttggtctggtggtattggcttgagacctgaaagtgtgctcctccttaaggtctcaagttcgattctatccggtgccaatttgg 37400368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 220 - 262
Target Start/End: Complemental strand, 42983429 - 42983387
Alignment:
Q  220 tggtattgacttgagatttgggagtgtgctcctccttgaggtc 262  Q
    ||||||||||||||||| |||||||||| ||||||||||||||    
T  42983429 tggtattgacttgagatctgggagtgtggtcctccttgaggtc 42983387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 197 - 274
Target Start/End: Complemental strand, 7743403 - 7743326
Alignment:
Q  197 ataacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgatt 274  Q
    |||||||||||||||||| ||| ||||||| ||| |  ||||||||||||| |||||||  |||||||| ||| ||||    
T  7743403 ataacccacttgggttggcctagtggtattaactaggaatttgggagtgtggtcctcctctaggtctcaagttcgatt 7743326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 220 - 273
Target Start/End: Original strand, 36124854 - 36124907
Alignment:
Q  220 tggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgat 273  Q
    ||||||||||||| ||  || ||||||||||||||||||||||||| |||||||    
T  36124854 tggtattgacttgggacctgagagtgtgctcctccttgaggtctcaagtttgat 36124907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 198 - 255
Target Start/End: Original strand, 51703778 - 51703835
Alignment:
Q  198 taacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctcct 255  Q
    ||||||| ||||||||||||| |||||||| ||||  || ||||||||||||||||||    
T  51703778 taacccatttgggttggtctagtggtattggcttggaatctgggagtgtgctcctcct 51703835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 291
Target Start/End: Complemental strand, 19940948 - 19940856
Alignment:
Q  199 aacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaattt 291  Q
    |||||||||||||||||||  |||| ||  |||| |   | ||||||||||||||||| |||||||| ||||||||||| || ||| ||||||    
T  19940948 aacccacttgggttggtctggtggtgttagcttgggtccttggagtgtgctcctccttaaggtctcaggtttgattctctccggtgccaattt 19940856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 197 - 276
Target Start/End: Original strand, 9117117 - 9117196
Alignment:
Q  197 ataacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattct 276  Q
    |||||||| ||||||||| |   |||||| | |||| ||| ||| |||||||||||||||||||||||| ||| ||||||    
T  9117117 ataacccatttgggttggccggttggtatgggcttgggatctggaagtgtgctcctccttgaggtctcaggttcgattct 9117196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 198 - 277
Target Start/End: Complemental strand, 18037690 - 18037611
Alignment:
Q  198 taacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctc 277  Q
    |||||||||||||||||||| ||| |||||  ||| || ||||||||||||||||  | ||| ||||| ||| |||||||    
T  18037690 taacccacttgggttggtctgatgatattggtttgggacttgggagtgtgctccttttcgagatctcaagttcgattctc 18037611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 240 - 295
Target Start/End: Original strand, 36428753 - 36428808
Alignment:
Q  240 ggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaatttgggt 295  Q
    ||||| ||||||||||  |||||||||||||||||||| || ||| ||||||||||    
T  36428753 ggagtatgctcctcctcaaggtctcatgtttgattctccccggtgccaatttgggt 36428808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 240 - 291
Target Start/End: Complemental strand, 42949327 - 42949276
Alignment:
Q  240 ggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaattt 291  Q
    |||||||||||||||| |||||||||| |||||||||| || ||| ||||||    
T  42949327 ggagtgtgctcctcctcgaggtctcatatttgattctctccggtgacaattt 42949276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 210 - 293
Target Start/End: Complemental strand, 52336839 - 52336756
Alignment:
Q  210 gttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaatttgg 293  Q
    ||||| ||| |||||||| |||| ||| ||||||||||||||||||| || ||||| ||| |||| || |  ||||||||||||    
T  52336839 gttggcctagtggtattggcttgggatctgggagtgtgctcctccttaagatctcaggttcgattatctctggtgtcaatttgg 52336756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 197 - 291
Target Start/End: Original strand, 1094523 - 1094617
Alignment:
Q  197 ataacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaattt 291  Q
    ||||||||||||||||||| |  |||||||||||||  |  || ||||||||||||||  |||||||||  || ||||||| || ||| ||||||    
T  1094523 ataacccacttgggttggtttgttggtattgacttggaacctgtgagtgtgctcctccacgaggtctcaaattcgattctctccggtgccaattt 1094617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 231 - 293
Target Start/End: Complemental strand, 1600336 - 1600274
Alignment:
Q  231 tgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaatttgg 293  Q
    |||||||||||||||||||||||||| | || ||| ||| ||||||| |  ||||||||||||    
T  1600336 tgagatttgggagtgtgctcctccttaaagtttcaggttcgattctctctggtgtcaatttgg 1600274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 203 - 277
Target Start/End: Original strand, 4824975 - 4825049
Alignment:
Q  203 cacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctc 277  Q
    ||||||||||||||| ||||| ||| |||| ||  | |||||||||||||| |  |||||||| |||||||||||    
T  4824975 cacttgggttggtctgatggtgttggcttgggaccttggagtgtgctcctcttcaaggtctcaggtttgattctc 4825049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 199 - 277
Target Start/End: Complemental strand, 8177258 - 8177180
Alignment:
Q  199 aacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctc 277  Q
    |||||| ||| ||||| ||| |||||||| |||| ||| ||||||||||||||||||  |||| ||| ||| |||||||    
T  8177258 aacccatttgagttggcctagtggtattggcttgggatctgggagtgtgctcctcctcaaggtttcaggttcgattctc 8177180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 284
Target Start/End: Original strand, 9964441 - 9964523
Alignment:
Q  202 ccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtg 284  Q
    ||||||||||| | || ||| |||||||||| ||| ||||||||||||| ||||  | |||||| |||||||| || ||||||    
T  9964441 ccacttgggttagcctgatgttattgacttgggatctgggagtgtgctcttcctcaatgtctcaggtttgattatctccagtg 9964523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 197 - 295
Target Start/End: Original strand, 10526821 - 10526919
Alignment:
Q  197 ataacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaatttgggt 295  Q
    |||||||| ||||||||||| | |||||||| |||| ||  ||||||| ||||||||||  ||||||||  || ||||||| |  | ||||||||||||    
T  10526821 ataacccatttgggttggtccagtggtattggcttgggacctgggagtttgctcctcctcaaggtctcagattcgattctctctggagtcaatttgggt 10526919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 223 - 277
Target Start/End: Original strand, 12587294 - 12587348
Alignment:
Q  223 tattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctc 277  Q
    |||||||||| ||| || ||||||||||||||| ||||||||| ||| |||||||    
T  12587294 tattgacttgggatctgtgagtgtgctcctcctcgaggtctcaggttcgattctc 12587348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 199 - 277
Target Start/End: Complemental strand, 19528403 - 19528325
Alignment:
Q  199 aacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctc 277  Q
    |||||||||||||||| ||  |||||||| |||| ||| |  |||||||||||||||  |||||||| ||| |||||||    
T  19528403 aacccacttgggttggcctggtggtattggcttgggatctatgagtgtgctcctcctcaaggtctcaggttcgattctc 19528325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 199 - 277
Target Start/End: Complemental strand, 21268069 - 21267991
Alignment:
Q  199 aacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctc 277  Q
    |||||||||| ||||| ||| | |||||| |||| || |||||||||||||||||||  ||||||   |||||||||||    
T  21268069 aacccacttgagttgggctagtagtattggcttgggacttgggagtgtgctcctcctctaggtcttgggtttgattctc 21267991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 199 - 277
Target Start/End: Complemental strand, 21547556 - 21547478
Alignment:
Q  199 aacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctc 277  Q
    |||| ||||||||||| ||| |||||||| |||| ||  |||||| ||||||||||| ||||| ||| ||| |||||||    
T  21547556 aaccgacttgggttggcctagtggtattggcttgggacatgggagggtgctcctcctcgaggtttcaggttcgattctc 21547478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 199 - 253
Target Start/End: Original strand, 21694446 - 21694500
Alignment:
Q  199 aacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctc 253  Q
    |||||||||||||||  ||  |||||||| ||||||| |||||||||||||||||    
T  21694446 aacccacttgggttgacctggtggtattggcttgagacttgggagtgtgctcctc 21694500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 219 - 277
Target Start/End: Complemental strand, 27476827 - 27476769
Alignment:
Q  219 atggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctc 277  Q
    ||||||||| |||| || || |||||||||||||||| ||| ||||| |||||||||||    
T  27476827 atggtattggcttgggacttaggagtgtgctcctcctcgagatctcaagtttgattctc 27476769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 199 - 277
Target Start/End: Original strand, 36371470 - 36371548
Alignment:
Q  199 aacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctc 277  Q
    |||||||||||||||| ||| |||||||| ||||  |  ||||||||||||||||||  |||||| | ||| |||||||    
T  36371470 aacccacttgggttggcctagtggtattggcttggaacctgggagtgtgctcctcctcaaggtctgaggttcgattctc 36371548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 249
Target Start/End: Complemental strand, 38979022 - 38978968
Alignment:
Q  195 tgataacccacttgggttggtctaatggtattgacttgagatttgggagtgtgct 249  Q
    |||||||||| ||||||||| ||| ||||||||||||||||  | ||||||||||    
T  38979022 tgataacccatttgggttggcctagtggtattgacttgagacctaggagtgtgct 38978968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 252
Target Start/End: Original strand, 10554639 - 10554688
Alignment:
Q  203 cacttgggttggtctaatggtattgacttgagatttgggagtgtgctcct 252  Q
    ||||||||||||| | ||  |||||||||||||||| |||||||||||||    
T  10554639 cacttgggttggttttataatattgacttgagattttggagtgtgctcct 10554688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 198 - 291
Target Start/End: Complemental strand, 11068920 - 11068827
Alignment:
Q  198 taacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaattt 291  Q
    ||||||| |||||||| |||  ||||||||||||| |||   |||||||||||||| |||||  ||||  ||  |||||| |||||||||||||    
T  11068920 taacccatttgggttgatctggtggtattgacttgggatccaggagtgtgctcctctttgagacctcagattcaattctctccagtgtcaattt 11068827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 277
Target Start/End: Original strand, 17297025 - 17297062
Alignment:
Q  240 ggagtgtgctcctccttgaggtctcatgtttgattctc 277  Q
    ||||||||||||||||  ||||||||||||||||||||    
T  17297025 ggagtgtgctcctcctcaaggtctcatgtttgattctc 17297062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 265
Target Start/End: Original strand, 28411351 - 28411396
Alignment:
Q  220 tggtattgacttgagatttgggagtgtgctcctccttgaggtctca 265  Q
    ||||||||||||| ||| || ||||||||||||| |||||||||||    
T  28411351 tggtattgacttgggatatgagagtgtgctcctctttgaggtctca 28411396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 277
Target Start/End: Complemental strand, 31383853 - 31383796
Alignment:
Q  220 tggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctc 277  Q
    |||||||| |||| ||  |||||||||||||||||||| ||||||| ||| |||||||    
T  31383853 tggtattggcttgggacctgggagtgtgctcctccttggggtctcaggttcgattctc 31383796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 206 - 255
Target Start/End: Original strand, 47720837 - 47720886
Alignment:
Q  206 ttgggttggtctaatggtattgacttgagatttgggagtgtgctcctcct 255  Q
    |||||||| |||  ||||||||||||||||| | ||||||||||||||||    
T  47720837 ttgggttgatctggtggtattgacttgagatataggagtgtgctcctcct 47720886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 206 - 255
Target Start/End: Original strand, 47727829 - 47727878
Alignment:
Q  206 ttgggttggtctaatggtattgacttgagatttgggagtgtgctcctcct 255  Q
    |||||||| |||  ||||||||||||||||| | ||||||||||||||||    
T  47727829 ttgggttgatctggtggtattgacttgagatataggagtgtgctcctcct 47727878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 198 - 255
Target Start/End: Complemental strand, 52116858 - 52116801
Alignment:
Q  198 taacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctcct 255  Q
    ||||||| ||||||||| ||  |||||||| |||| || |||||||||||||||||||    
T  52116858 taacccagttgggttggcctggtggtattggcttgggacttgggagtgtgctcctcct 52116801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 199 - 291
Target Start/End: Original strand, 2219972 - 2220064
Alignment:
Q  199 aacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaattt 291  Q
    ||||||||||||||| |||  |||||||| ||||  |  ||  |||||||| ||||| ||||||||| ||| ||||||| ||| |||||||||    
T  2219972 aacccacttgggttgttctggtggtattggcttggaacctgaaagtgtgcttctcctcgaggtctcaggttcgattctctccaatgtcaattt 2220064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 252
Target Start/End: Original strand, 30360815 - 30360847
Alignment:
Q  220 tggtattgacttgagatttgggagtgtgctcct 252  Q
    |||||||||||||||||| ||||||||||||||    
T  30360815 tggtattgacttgagattagggagtgtgctcct 30360847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 292
Target Start/End: Original strand, 43446004 - 43446056
Alignment:
Q  240 ggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaatttg 292  Q
    ||||||||||||||||  |||||||||||| ||||||| || ||| |||||||    
T  43446004 ggagtgtgctcctcctcaaggtctcatgttcgattctccccggtgccaatttg 43446056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 198 - 265
Target Start/End: Original strand, 50901580 - 50901648
Alignment:
Q  198 taacccacttgggttggtctaatggta-ttgacttgagatttgggagtgtgctcctccttgaggtctca 265  Q
    ||||||||||||||||| ||| ||||| ||| |||| ||  ||| |||||||||||||| |||||||||    
T  50901580 taacccacttgggttggcctagtggtaattggcttgggacctggtagtgtgctcctcctcgaggtctca 50901648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 50; Significance: 1e-19; HSPs: 55)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 199 - 292
Target Start/End: Complemental strand, 31520681 - 31520588
Alignment:
Q  199 aacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaatttg 292  Q
    |||||||||||||||| ||  ||| |||| |||| ||| |||||||||||||||||| ||||||| | ||||||||||| ||||||||||||||    
T  31520681 aacccacttgggttggcctggtggcattggcttgggatctgggagtgtgctcctcctcgaggtcttaggtttgattctctccagtgtcaatttg 31520588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 199 - 291
Target Start/End: Original strand, 36720381 - 36720473
Alignment:
Q  199 aacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaattt 291  Q
    |||||||||||||||||||  |||||||| |||| ||| |||||||||||||||||| ||||| ||| ||| ||||||| | |||||||||||    
T  36720381 aacccacttgggttggtctggtggtattggcttgggatatgggagtgtgctcctcctcgaggtttcaggttcgattctctctagtgtcaattt 36720473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 197 - 277
Target Start/End: Complemental strand, 49494224 - 49494144
Alignment:
Q  197 ataacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctc 277  Q
    ||||| |||||||||| | ||| |||||||||||||| |||||||||||||||| |||| ||||||||| |||||||||||    
T  49494224 ataactcacttgggttagcctagtggtattgacttgaaatttgggagtgtgctcttcctcgaggtctcaggtttgattctc 49494144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 200 - 291
Target Start/End: Complemental strand, 47454692 - 47454601
Alignment:
Q  200 acccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaattt 291  Q
    |||||||||||||| |||| |||||||| |||||||| | |||||||||||||||| ||||||||| ||| ||||||| ||| || ||||||    
T  47454692 acccacttgggttgttctagtggtattggcttgagatcttggagtgtgctcctcctcgaggtctcaggttcgattctccccaatgccaattt 47454601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 199 - 265
Target Start/End: Complemental strand, 16213048 - 16212982
Alignment:
Q  199 aacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctca 265  Q
    ||||||||||||||||||||||| | ||| ||||||| |||||||||||||||||||| ||||||||    
T  16213048 aacccacttgggttggtctaatgatgttgccttgagacttgggagtgtgctcctccttaaggtctca 16212982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 199 - 295
Target Start/End: Complemental strand, 10499185 - 10499089
Alignment:
Q  199 aacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaatttgggt 295  Q
    |||||||||||||||| ||  |||||||| |||| ||| ||||||| ||||| |||||||||||||| ||| ||||||| ||  |||||||||||||    
T  10499185 aacccacttgggttggcctggtggtattggcttgggatctgggagtctgctcttccttgaggtctcaggttcgattctctccgatgtcaatttgggt 10499089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 199 - 265
Target Start/End: Complemental strand, 2597296 - 2597230
Alignment:
Q  199 aacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctca 265  Q
    |||||||||||||||||||  |||||||| |||  ||||| ||||||||||||||||||||||||||    
T  2597296 aacccacttgggttggtctggtggtattggcttcggatttaggagtgtgctcctccttgaggtctca 2597230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 206 - 292
Target Start/End: Complemental strand, 4844580 - 4844494
Alignment:
Q  206 ttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaatttg 292  Q
    ||||||||||||  ||||||||||||| ||| |||||||||||||||||| ||||||||| | | ||||||| || ||| |||||||    
T  4844580 ttgggttggtctggtggtattgacttgggatctgggagtgtgctcctcctcgaggtctcaggatcgattctctccggtgccaatttg 4844494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 206 - 292
Target Start/End: Complemental strand, 4870276 - 4870190
Alignment:
Q  206 ttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaatttg 292  Q
    ||||||||||||  ||||||||||||| ||| |||||||||||||||||| ||||||||| | | ||||||| || ||| |||||||    
T  4870276 ttgggttggtctggtggtattgacttgggatctgggagtgtgctcctcctcgaggtctcaggatcgattctctccggtgccaatttg 4870190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 199 - 277
Target Start/End: Complemental strand, 17108974 - 17108896
Alignment:
Q  199 aacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctc 277  Q
    |||||||||||||| || |  ||||||||||| ||||| ||||||||||||||||||  |||||||| |||||||||||    
T  17108974 aacccacttgggttagtttggtggtattgactggagatgtgggagtgtgctcctcctcaaggtctcaggtttgattctc 17108896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 199 - 277
Target Start/End: Complemental strand, 27093437 - 27093359
Alignment:
Q  199 aacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctc 277  Q
    |||||||||||||||| ||| |||||||| ||||  | |||||||||||||||||||  |||||||| |||||||||||    
T  27093437 aacccacttgggttggcctagtggtattggcttggaacttgggagtgtgctcctcctcaaggtctcaggtttgattctc 27093359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 199 - 263
Target Start/End: Complemental strand, 5499483 - 5499419
Alignment:
Q  199 aacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtct 263  Q
    |||||||||||||||| ||  ||||||||||||||||| || |||||||||||||||| ||||||    
T  5499483 aacccacttgggttggcctggtggtattgacttgagatctgagagtgtgctcctccttaaggtct 5499419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 199 - 277
Target Start/End: Original strand, 46518628 - 46518706
Alignment:
Q  199 aacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctc 277  Q
    ||||||||||||||||  || |||||||| |||| ||| ||||||||||||||||||  |||| ||| |||||||||||    
T  46518628 aacccacttgggttggcatagtggtattggcttgggatctgggagtgtgctcctcctcaaggtttcaggtttgattctc 46518706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 198 - 292
Target Start/End: Complemental strand, 51903955 - 51903861
Alignment:
Q  198 taacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaatttg 292  Q
    |||||||| |||||||  ||  |||||||| |||| ||| |||||||||||||||||| | ||||||| ||| ||||||| || |||||||||||    
T  51903955 taacccacctgggttgacctgttggtattggcttgggatctgggagtgtgctcctcctcgtggtctcaggttcgattctctccggtgtcaatttg 51903861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 198 - 291
Target Start/End: Original strand, 14186647 - 14186739
Alignment:
Q  198 taacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaattt 291  Q
    ||||||||||||||||| ||| |||||||| |||| ||  ||| ||||||||||||||  |||||||| ||| ||||||| || ||||||||||    
T  14186647 taacccacttgggttggcctagtggtattgtcttgggacctgg-agtgtgctcctcctcaaggtctcaggttcgattctctccggtgtcaattt 14186739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 198 - 295
Target Start/End: Complemental strand, 47810821 - 47810724
Alignment:
Q  198 taacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaatttgggt 295  Q
    ||||||||||||||||||||  |||||||| |||  |  ||||||||||||||||||   |||||||  ||||||||||| || ||| ||||||||||    
T  47810821 taacccacttgggttggtctggtggtattggctttggtcttgggagtgtgctcctccgcaaggtctcgggtttgattctctccggtgccaatttgggt 47810724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 199 - 295
Target Start/End: Complemental strand, 31789046 - 31788951
Alignment:
Q  199 aacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaatttgggt 295  Q
    |||||||||||||||| ||| || ||||| |||| ||| |||||||||||||||||| ||||| | | |||||||| ||  | ||||||||||||||    
T  31789046 aacccacttgggttggcctagtgttattggcttgggatctgggagtgtgctcctcctcgaggttttaggtttgattatc-tctgtgtcaatttgggt 31788951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 198 - 274
Target Start/End: Original strand, 35111179 - 35111255
Alignment:
Q  198 taacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgatt 274  Q
    |||||||||||| |||| ||| ||| ||||| ||||||  ||||||||||||| |||| ||||||||||||| ||||    
T  35111179 taacccacttggattggcctagtggcattgatttgagacctgggagtgtgctcatcctcgaggtctcatgttcgatt 35111255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 203 - 258
Target Start/End: Original strand, 36797691 - 36797746
Alignment:
Q  203 cacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttga 258  Q
    ||||||||||||||| ||| ||||||||||| || || ||||||||||||||||||    
T  36797691 cacttgggttggtctgatgatattgacttgaaatatgagagtgtgctcctccttga 36797746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 199 - 277
Target Start/End: Complemental strand, 8368875 - 8368797
Alignment:
Q  199 aacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctc 277  Q
    |||||| ||| ||||| ||| |||||||||||||| |  ||| ||||||||| |||| ||||||||| |||||||||||    
T  8368875 aacccaattgagttggcctagtggtattgacttgaaacctggtagtgtgctcatcctcgaggtctcaggtttgattctc 8368797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 199 - 277
Target Start/End: Original strand, 30311306 - 30311384
Alignment:
Q  199 aacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctc 277  Q
    ||||||| |||||||| ||| |||||| | |||| ||| ||||||||||||||||||  |||||||| ||| |||||||    
T  30311306 aacccacctgggttggcctagtggtataggcttgggatctgggagtgtgctcctcctcaaggtctcaggttcgattctc 30311384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 198 - 292
Target Start/End: Original strand, 40063618 - 40063712
Alignment:
Q  198 taacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaatttg 292  Q
    ||||||||||||||||   || | |||||| |||| ||| || |||| ||||||||||| |||||||| ||| ||||||| |||||| |||||||    
T  40063618 taacccacttgggttgacttagtagtattggcttgggatctgagagtatgctcctccttaaggtctcaagttcgattctctccagtgccaatttg 40063712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 229 - 295
Target Start/End: Complemental strand, 44743901 - 44743835
Alignment:
Q  229 cttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaatttgggt 295  Q
    |||| ||| |||||||||||||||||| ||||||||| ||| |||| || |||||| ||||||||||    
T  44743901 cttgggatctgggagtgtgctcctcctcgaggtctcaggttcgattatctccagtgccaatttgggt 44743835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 206 - 291
Target Start/End: Original strand, 2667869 - 2667954
Alignment:
Q  206 ttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaattt 291  Q
    ||||||||| ||  |||||||| |||| ||| ||||||||||||| |||| ||||||||| ||| |||| || | |||||||||||    
T  2667869 ttgggttggcctggtggtattggcttgggatctgggagtgtgctcttcctcgaggtctcaggttcgattatctctagtgtcaattt 2667954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 198 - 295
Target Start/End: Original strand, 8170671 - 8170768
Alignment:
Q  198 taacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaatttgggt 295  Q
    ||||||| ||||||||| ||| |||||||| ||||| | |||||||||||||||| ||  |||||||| ||| ||||  | |  ||||||||||||||    
T  8170671 taacccatttgggttggcctagtggtattggcttgaaacttgggagtgtgctcctactcaaggtctcaggttcgatttcctctggtgtcaatttgggt 8170768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 197 - 277
Target Start/End: Complemental strand, 10445218 - 10445137
Alignment:
Q  197 ataacccacttgggttggtctaatggta-ttgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctc 277  Q
    |||||||||||||||||| ||| ||| | ||| |||| ||  |||||||||||||||||| ||||||||| ||| |||||||    
T  10445218 ataacccacttgggttggcctagtggcaattggcttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctc 10445137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 198 - 291
Target Start/End: Original strand, 12761511 - 12761604
Alignment:
Q  198 taacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaattt 291  Q
    |||||| | |||||||||||  ||||||||||||| ||  |||||||||| ||||||||||| ||||| ||| |||| || || ||| ||||||    
T  12761511 taacccgcatgggttggtctggtggtattgacttgggacctgggagtgtgttcctccttgagctctcaggttcgattttccccggtgccaattt 12761604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 198 - 255
Target Start/End: Original strand, 19341800 - 19341857
Alignment:
Q  198 taacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctcct 255  Q
    ||||||| ||||||||  ||| |||||| ||||||||| |||||||||||||||||||    
T  19341800 taacccatttgggttgccctagtggtatagacttgagacttgggagtgtgctcctcct 19341857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 199 - 292
Target Start/End: Complemental strand, 37788541 - 37788448
Alignment:
Q  199 aacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaatttg 292  Q
    |||||||||||||||| | | |||||||||||||  |  | ||||||||||||||||  |||||||| ||| ||||||| | |||| |||||||    
T  37788541 aacccacttgggttggcccagtggtattgacttggaacctaggagtgtgctcctcctcaaggtctcaggttcgattctctctagtgccaatttg 37788448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 206 - 263
Target Start/End: Complemental strand, 38550473 - 38550416
Alignment:
Q  206 ttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtct 263  Q
    ||||||||| ||  ||||||||||||  | ||||||||||||||||||||||||||||    
T  38550473 ttgggttggcctgttggtattgacttagggtttgggagtgtgctcctccttgaggtct 38550416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 238 - 291
Target Start/End: Complemental strand, 52770020 - 52769967
Alignment:
Q  238 tgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaattt 291  Q
    |||||||||||||||||||||||||||| ||| |||||||   |||||||||||    
T  52770020 tgggagtgtgctcctccttgaggtctcaggttcgattctctttagtgtcaattt 52769967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 255
Target Start/End: Original strand, 4222141 - 4222197
Alignment:
Q  199 aacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctcct 255  Q
    ||||||||||||||||  || |||||||| |||| ||| ||||||||||||||||||    
T  4222141 aacccacttgggttggcttagtggtattggcttgggatctgggagtgtgctcctcct 4222197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 198 - 290
Target Start/End: Original strand, 14339609 - 14339701
Alignment:
Q  198 taacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaatt 290  Q
    ||||||| |||| |||| ||  |||||||| |||| ||||||||||||||||||||||  | |||||| ||| ||||||| | |||| |||||    
T  14339609 taacccagttggattggcctggtggtattggcttgggatttgggagtgtgctcctcctcaatgtctcaggttcgattctccctagtgccaatt 14339701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 198 - 254
Target Start/End: Complemental strand, 31510795 - 31510739
Alignment:
Q  198 taacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctcc 254  Q
    |||||||||| |||||||||  ||||||||||||| || |||||||| |||||||||    
T  31510795 taacccacttaggttggtctggtggtattgacttgggacttgggagtatgctcctcc 31510739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 229 - 277
Target Start/End: Complemental strand, 31608570 - 31608522
Alignment:
Q  229 cttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctc 277  Q
    |||||||| |||||||||||||||||| |||||||||  ||||||||||    
T  31608570 cttgagatctgggagtgtgctcctcctcgaggtctcagatttgattctc 31608522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 202 - 293
Target Start/End: Complemental strand, 13808958 - 13808867
Alignment:
Q  202 ccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaatttgg 293  Q
    ||||||||||||||||  |  |||||||||| ||| ||| ||||||||||||||  |||||||| |||  |||||| | | |||||||||||    
T  13808958 ccacttgggttggtctggtcttattgacttgggatctggcagtgtgctcctcctctaggtctcaggttcaattctctctaatgtcaatttgg 13808867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 199 - 274
Target Start/End: Complemental strand, 15048137 - 15048062
Alignment:
Q  199 aacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgatt 274  Q
    ||||||||||||||||  ||||||||| | |||| ||| ||||| ||||||||||||  |||||||| ||| ||||    
T  15048137 aacccacttgggttggcttaatggtataggcttgggatctgggaatgtgctcctcctcaaggtctcaggttcgatt 15048062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 198 - 277
Target Start/End: Original strand, 16991541 - 16991620
Alignment:
Q  198 taacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctc 277  Q
    ||||||| ||||||||| ||  |||||||| |||| ||| ||||||||| ||| || |||||||||||  ||||||||||    
T  16991541 taacccatttgggttggcctggtggtattggcttgggatctgggagtgtactcttctttgaggtctcagttttgattctc 16991620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 241 - 292
Target Start/End: Original strand, 20501738 - 20501789
Alignment:
Q  241 gagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaatttg 292  Q
    |||||||||||||||| |||||||| ||| ||||||| |||||| |||||||    
T  20501738 gagtgtgctcctccttaaggtctcaggttcgattctctccagtgccaatttg 20501789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 198 - 277
Target Start/End: Complemental strand, 28703481 - 28703402
Alignment:
Q  198 taacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctc 277  Q
    ||||||||||||||||||| | || ||||  |||| ||| |||||||||||||||| |  |||||||| ||| |||||||    
T  28703481 taacccacttgggttggtccagtgatattagcttgggatctgggagtgtgctcctcttcaaggtctcaggttcgattctc 28703402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 198 - 293
Target Start/End: Complemental strand, 40286934 - 40286839
Alignment:
Q  198 taacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaatttgg 293  Q
    ||||||||||||||||||||  |||| ||  |||||||| | |||||||| |||||||  || ||| |||||| |||||| ||| ||| |||||||    
T  40286934 taacccacttgggttggtctggtggtgttcgcttgagatcttggagtgtggtcctcctcaagatcttatgtttcattctctccaatgttaatttgg 40286839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 202 - 265
Target Start/End: Original strand, 53412948 - 53413011
Alignment:
Q  202 ccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctca 265  Q
    ||||||||||||||||| |||||||| ||||  |  ||||||||||||||||||  ||||||||    
T  53412948 ccacttgggttggtctagtggtattggcttgtaacctgggagtgtgctcctcctcaaggtctca 53413011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 199 - 249
Target Start/End: Original strand, 203090 - 203140
Alignment:
Q  199 aacccacttgggttggtctaatggtattgacttgagatttgggagtgtgct 249  Q
    |||||||||||||||| ||| ||||||||||||| |||  |||||||||||    
T  203090 aacccacttgggttggcctagtggtattgacttgggatcagggagtgtgct 203140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 201 - 291
Target Start/End: Original strand, 8390639 - 8390729
Alignment:
Q  201 cccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaattt 291  Q
    ||||||||| |||||||| |||||||| ||||||| |||| ||||||||| ||||  |||||| |  || ||||||  | |||||||||||    
T  8390639 cccacttggattggtctagtggtattgccttgagacttggaagtgtgctcttcctcaaggtcttagattcgattctttctagtgtcaattt 8390729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 199 - 277
Target Start/End: Complemental strand, 37051370 - 37051292
Alignment:
Q  199 aacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctc 277  Q
    ||||||||||||||| | || || |||||| ||| ||| |||||||||| |||||||| | |||||| ||| |||||||    
T  37051370 aacccacttgggttgatttagtgatattgatttgggatctgggagtgtgttcctccttaaagtctcaggttcgattctc 37051292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 206 - 295
Target Start/End: Complemental strand, 8075196 - 8075107
Alignment:
Q  206 ttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaatttgggt 295  Q
    ||||||||  ||| |||||| | |||| || |||||||||||||||||||  |||| ||| ||| ||||| | | |||||||||||||||    
T  8075196 ttgggttgccctagtggtataggcttgggacttgggagtgtgctcctcctcaaggtttcaggttcgattccctctagtgtcaatttgggt 8075107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 308
Target Start/End: Original strand, 11612307 - 11612408
Alignment:
Q  207 tgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaatttgggtagaataatata 306  Q
    |||||||| ||  ||||||| ||||| ||  ||||||||||||||||||| |||||||| ||| ||| ||| || ||| |||||| ||| || |||| ||    
T  11612307 tgggttggcctggtggtattcacttgggagctgggagtgtgctcctccttaaggtctcaggttcgatgctccccggtgccaatttaggtcgactaattta 11612406  T
Q  307 gc 308  Q
    ||    
T  11612407 gc 11612408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 308
Target Start/End: Complemental strand, 27923119 - 27923010
Alignment:
Q  199 aacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaatttgggtaga 298  Q
    ||||||||| |||||| ||  |||||||| |||| ||  ||| ||||||||||||||    |||||| ||| ||||| |||| |||||||||||||| ||    
T  27923119 aacccacttaggttggcctggtggtattggcttgggacatggaagtgtgctcctcctcatagtctcaggttcgattcccacctgtgtcaatttgggtgga 27923020  T
Q  299 ataatatagc 308  Q
     |||| ||||    
T  27923019 ctaatttagc 27923010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 291
Target Start/End: Complemental strand, 33861771 - 33861718
Alignment:
Q  238 tgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaattt 291  Q
    |||||||||||||||||| ||||||| ||||| ||||||| ||| | |||||||    
T  33861771 tgggagtgtgctcctcctcgaggtctaatgttcgattctccccaatatcaattt 33861718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 274
Target Start/End: Complemental strand, 47279450 - 47279405
Alignment:
Q  229 cttgagatttgggagtgtgctcctccttgaggtctcatgtttgatt 274  Q
    |||| ||| ||||||||||||||||||| |||||||||||| ||||    
T  47279450 cttgggatctgggagtgtgctcctccttaaggtctcatgttcgatt 47279405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 198 - 255
Target Start/End: Original strand, 51766895 - 51766951
Alignment:
Q  198 taacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctcct 255  Q
    ||||||||||||||| |||  |||||||||||||| ||| ||||||||||||| ||||    
T  51766895 taacccacttgggttagtccgatggtattgacttg-gatctgggagtgtgctcttcct 51766951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 42430333 - 42430388
Alignment:
Q  197 ataacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctc 253  Q
    |||||||||||||||||| ||  ||||||||||||| ||| | ||||||||||||||    
T  42430333 ataacccacttgggttgg-ctggtggtattgacttgggatcttggagtgtgctcctc 42430388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 276
Target Start/End: Original strand, 44069779 - 44069835
Alignment:
Q  220 tggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattct 276  Q
    |||| ||| |||||||| | ||||||||||||||||  |||||||| ||||||||||    
T  44069779 tggtgttggcttgagatcttggagtgtgctcctcctcaaggtctcaggtttgattct 44069835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 239 - 295
Target Start/End: Complemental strand, 47237007 - 47236951
Alignment:
Q  239 gggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaatttgggt 295  Q
    ||||||||||||||| |  |||||||||||| ||||||| || ||| ||||||||||    
T  47237007 gggagtgtgctcctcttcaaggtctcatgttcgattctccccggtgccaatttgggt 47236951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 199 - 275
Target Start/End: Original strand, 53956384 - 53956460
Alignment:
Q  199 aacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattc 275  Q
    |||||||||||||||  || |||| |||| |||| ||   |||||||||| ||| |||||||||||||||| |||||    
T  53956384 aacccacttgggttgtcctgatggcattggcttgggacccgggagtgtgccccttcttgaggtctcatgttcgattc 53956460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 49; Significance: 5e-19; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 199 - 295
Target Start/End: Complemental strand, 44780190 - 44780094
Alignment:
Q  199 aacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaatttgggt 295  Q
    |||||||||||||||| ||| ||| |||| |||| || |||||||||||||||||||  |||||||| ||||||||| | | |||||||||||||||    
T  44780190 aacccacttgggttggcctagtggcattggcttgggacttgggagtgtgctcctcctcaaggtctcaggtttgattccctctagtgtcaatttgggt 44780094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 199 - 282
Target Start/End: Complemental strand, 35641977 - 35641894
Alignment:
Q  199 aacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccag 282  Q
    |||||||||||||||||||  |||||| | ||||||||||||||||||||||||||| || |||||| ||| ||||||| ||||    
T  35641977 aacccacttgggttggtctggtggtatcggcttgagatttgggagtgtgctcctcctcgatgtctcaggttcgattctctccag 35641894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 202 - 277
Target Start/End: Original strand, 36205198 - 36205273
Alignment:
Q  202 ccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctc 277  Q
    |||||||||||||||| ||| |||||  ||||||| ||||||||||||||||||  |||||||||||| |||||||    
T  36205198 ccacttgggttggtctgatgttattggtttgagatctgggagtgtgctcctcctcaaggtctcatgttcgattctc 36205273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 199 - 277
Target Start/End: Original strand, 16852340 - 16852418
Alignment:
Q  199 aacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctc 277  Q
    |||||||||||||||| ||| |||||||| |||| ||  |||||||||||||||||| ||||||||| ||| |||||||    
T  16852340 aacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctc 16852418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 198 - 295
Target Start/End: Original strand, 35287715 - 35287812
Alignment:
Q  198 taacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaatttgggt 295  Q
    |||||||||||||| || ||  |||| ||| |||||||||| ||||||||||||||||  |||| ||||||| ||||||| || ||| ||||||||||    
T  35287715 taacccacttgggtaggcctggtggtgttggcttgagattttggagtgtgctcctcctcaaggtatcatgttcgattctctccggtgccaatttgggt 35287812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 199 - 295
Target Start/End: Original strand, 28783060 - 28783156
Alignment:
Q  199 aacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaatttgggt 295  Q
    ||||||||||||||||  |  |||||||| |||||||  ||||||||||||||||||  |||||||||||| |||||||  | ||| ||||||||||    
T  28783060 aacccacttgggttggcttggtggtattggcttgagacctgggagtgtgctcctcctcaaggtctcatgttcgattctcctcggtgccaatttgggt 28783156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 202 - 274
Target Start/End: Complemental strand, 34966923 - 34966851
Alignment:
Q  202 ccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgatt 274  Q
    ||||||| |||||||| ||||||||| ||||||| ||||||||||||| ||| | ||||||||| ||||||||    
T  34966923 ccacttgagttggtctgatggtattggcttgagacttgggagtgtgctactcttcgaggtctcaagtttgatt 34966851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 199 - 290
Target Start/End: Complemental strand, 19703563 - 19703472
Alignment:
Q  199 aacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaatt 290  Q
    |||||||||||||||| ||| |||||||| |||| ||  || |||||||||||||||  |||||||| ||| ||||||| | ||||||||||    
T  19703563 aacccacttgggttggcctagtggtattggcttgggacctgagagtgtgctcctcctcaaggtctcaggttcgattctccctagtgtcaatt 19703472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 199 - 277
Target Start/End: Complemental strand, 6569847 - 6569769
Alignment:
Q  199 aacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctc 277  Q
    ||||||||| |||||| ||| || ||||| |||| ||| ||||||||||||||||||| |||| ||||||| |||||||    
T  6569847 aacccacttaggttggcctagtgatattggcttgggatctgggagtgtgctcctcctttaggtttcatgttcgattctc 6569769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 221 - 295
Target Start/End: Complemental strand, 11492127 - 11492053
Alignment:
Q  221 ggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaatttgggt 295  Q
    ||||||| |||||||| ||||||||||||||| || ||||||| | ||| |||||||  ||||||||||||||||    
T  11492127 ggtattggcttgagatctgggagtgtgctccttctcgaggtcttaggttcgattctcttcagtgtcaatttgggt 11492053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 199 - 277
Target Start/End: Original strand, 29431011 - 29431089
Alignment:
Q  199 aacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctc 277  Q
    |||||||||||||||| ||   ||||||| |||| || |||||||||||||||||||||||| |||| ||| |||||||    
T  29431011 aacccacttgggttggcctggcggtattggcttgggacttgggagtgtgctcctccttgaggcctcaggttcgattctc 29431089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 198 - 295
Target Start/End: Original strand, 11819775 - 11819872
Alignment:
Q  198 taacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaatttgggt 295  Q
    ||||||| ||||||||  ||| |||||| | |||| || |||||||||||||||||||  |||||||| ||| ||||| | | |||||||||||||||    
T  11819775 taacccatttgggttgccctagtggtataggcttgggacttgggagtgtgctcctcctcaaggtctcaggttcgattcactctagtgtcaatttgggt 11819872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 198 - 291
Target Start/End: Complemental strand, 23361726 - 23361633
Alignment:
Q  198 taacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaattt 291  Q
    ||||||||||||||||  ||  ||||||||||||| ||| ||||||||||||||||||  |||||||| |||  |||||| |  ||||||||||    
T  23361726 taacccacttgggttgacctggtggtattgacttgggatatgggagtgtgctcctcctcaaggtctcaggttcaattctctctggtgtcaattt 23361633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 199 - 254
Target Start/End: Complemental strand, 20994534 - 20994479
Alignment:
Q  199 aacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctcc 254  Q
    |||||||||||||||| ||| ||||||||||||| ||  |||||||||||||||||    
T  20994534 aacccacttgggttggcctagtggtattgacttgggacctgggagtgtgctcctcc 20994479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 199 - 277
Target Start/End: Original strand, 968362 - 968440
Alignment:
Q  199 aacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctc 277  Q
    |||||||||| ||||| ||  |||||||| |||| ||  |||||||||||||||||| ||||||||| ||| |||||||    
T  968362 aacccacttgagttggcctggtggtattggcttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctc 968440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 201 - 295
Target Start/End: Original strand, 2203494 - 2203588
Alignment:
Q  201 cccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaatttgggt 295  Q
    |||||||||||||| ||| |||||||| |||| ||  ||||||||||||||||||  |||||||| | |  |||||| || ||| ||||||||||    
T  2203494 cccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaaggtctcagggtcaattctccccggtgccaatttgggt 2203588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 199 - 277
Target Start/End: Complemental strand, 3826853 - 3826775
Alignment:
Q  199 aacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctc 277  Q
    |||||||||||||||| ||| |||||||| ||||  ||||| ||||||||||||||  ||| ||||| ||| |||||||    
T  3826853 aacccacttgggttggcctagtggtattggcttgccatttgagagtgtgctcctccacgagatctcaggttcgattctc 3826775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 199 - 293
Target Start/End: Original strand, 11942453 - 11942547
Alignment:
Q  199 aacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaatttgg 293  Q
    ||||||||||  ||||||||||| ||||   ||  ||||||| ||||||||||| || ||||| |||| || |||||| ||||||||||||||||    
T  11942453 aacccacttgaattggtctaatgatattagtttaggatttggaagtgtgctccttctcgaggtttcatattcgattcttaccagtgtcaatttgg 11942547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 201 - 277
Target Start/End: Original strand, 3624582 - 3624658
Alignment:
Q  201 cccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctc 277  Q
    |||||||||||||| ||| |||||||| |||| ||  |||||||||||||||| |  |||||||| ||| |||||||    
T  3624582 cccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcttcaaggtctcaggttcgattctc 3624658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 291
Target Start/End: Original strand, 8484999 - 8485091
Alignment:
Q  199 aacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaattt 291  Q
    |||||||||||||||| ||  |||||||  |||| ||  || ||||||||||||| |||||||||||| || ||||||| || ||| ||||||    
T  8484999 aacccacttgggttggcctggtggtatttgcttgggacctgtgagtgtgctcctctttgaggtctcattttcgattctctccggtgccaattt 8485091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 197 - 293
Target Start/End: Original strand, 27750728 - 27750824
Alignment:
Q  197 ataacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaatttgg 293  Q
    |||||||| ||||||||  ||  |||||| | |||| || |||||||||||||||||||  |||||||| ||| ||||| | | |||||||||||||    
T  27750728 ataacccatttgggttgccctcgtggtataggcttgggacttgggagtgtgctcctcctcaaggtctcaggttcgattccctctagtgtcaatttgg 27750824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 255
Target Start/End: Complemental strand, 30483960 - 30483904
Alignment:
Q  199 aacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctcct 255  Q
    |||||||||||||||| | | |||||||| |||| ||| ||||||||||||||||||    
T  30483960 aacccacttgggttggcccagtggtattggcttgggatatgggagtgtgctcctcct 30483904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 198 - 293
Target Start/End: Complemental strand, 33727950 - 33727855
Alignment:
Q  198 taacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaatttgg 293  Q
    ||||||| ||||||||  ||| |||||| |  |||||| |||| ||||||||||||||  |||||||| ||| ||||| | | |||||||||||||    
T  33727950 taacccatttgggttgccctagtggtataggtttgagacttggaagtgtgctcctcctcaaggtctcaggttcgattccctctagtgtcaatttgg 33727855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 199 - 265
Target Start/End: Original strand, 5264544 - 5264610
Alignment:
Q  199 aacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctca 265  Q
    |||||||||||||||| ||| |||||||| ||||  |  ||||| |||||||||||| |||||||||    
T  5264544 aacccacttgggttggcctagtggtattggcttggaacctgggaatgtgctcctcctcgaggtctca 5264610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 199 - 265
Target Start/End: Original strand, 8059632 - 8059698
Alignment:
Q  199 aacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctca 265  Q
    |||||||||||||||| || ||||||||||||||  || || ||||||| |||||||  ||||||||    
T  8059632 aacccacttgggttggcctgatggtattgacttggcatgtgagagtgtgatcctcctcaaggtctca 8059698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 199 - 277
Target Start/End: Original strand, 18540298 - 18540376
Alignment:
Q  199 aacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctc 277  Q
    |||||||||||||||| ||| |||||||| |||| ||  ||||||||| || |||||  |||||||| ||| |||||||    
T  18540298 aacccacttgggttggcctagtggtattggcttgggacctgggagtgtacttctcctcaaggtctcaggttcgattctc 18540376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 199 - 265
Target Start/End: Complemental strand, 43969074 - 43969008
Alignment:
Q  199 aacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctca 265  Q
    ||||||||||||||||  | ||||||||| |||| |  || ||||||||||||||| ||||||||||    
T  43969074 aacccacttgggttggcatgatggtattggcttggggcttaggagtgtgctcctccctgaggtctca 43969008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 291
Target Start/End: Complemental strand, 28787529 - 28787480
Alignment:
Q  242 agtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaattt 291  Q
    ||||||||||||||  |||||||| ||||||||||| |||||| ||||||    
T  28787529 agtgtgctcctcctcaaggtctcaggtttgattctccccagtgccaattt 28787480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 198 - 291
Target Start/End: Original strand, 35826310 - 35826403
Alignment:
Q  198 taacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaattt 291  Q
    ||||||| ||||||||| ||| ||||| || |||||||  || |||||||||||||||| | || ||   || |||||||||| ||||||||||    
T  35826310 taacccaattgggttggcctagtggtagtggcttgagacctgtgagtgtgctcctccttaaagtttcggattcgattctcaccggtgtcaattt 35826403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 199 - 295
Target Start/End: Complemental strand, 11793597 - 11793501
Alignment:
Q  199 aacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaatttgggt 295  Q
    |||||||||||||||||||  |||| ||  |||| ||  | ||||||||||||||||  |||||| | ||||||||||  || ||| ||||||||||    
T  11793597 aacccacttgggttggtcttgtggtgttcgcttgggaccttggagtgtgctcctcctcaaggtcttaggtttgattcttcccggtgccaatttgggt 11793501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 199 - 277
Target Start/End: Original strand, 14254727 - 14254802
Alignment:
Q  199 aacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctc 277  Q
    |||||||||||||||  ||| | ||||||  ||||||| ||||||||||   ||||||||| ||||||||| |||||||    
T  14254727 aacccacttgggttgacctagttgtattggtttgagatctgggagtgtg---ctccttgagatctcatgttcgattctc 14254802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 265
Target Start/End: Complemental strand, 23874460 - 23874392
Alignment:
Q  197 ataacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctca 265  Q
    |||||||||||||||||| ||| |||||||| |||| ||  ||||| | ||| |||||| |||||||||    
T  23874460 ataacccacttgggttggcctagtggtattggcttgggacctgggaatctgcgcctcctcgaggtctca 23874392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 47; Significance: 8e-18; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 198 - 292
Target Start/End: Original strand, 11423565 - 11423659
Alignment:
Q  198 taacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaatttg 292  Q
    |||||| |||||| ||||||  ||||||||||||| ||||||||||| |||| ||||| ||||||||| ||| |||| || ||||||||||||||    
T  11423565 taacccgcttgggctggtctggtggtattgacttgggatttgggagtatgcttctcctcgaggtctcaggttcgattttctccagtgtcaatttg 11423659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 198 - 291
Target Start/End: Original strand, 3715451 - 3715544
Alignment:
Q  198 taacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaattt 291  Q
    ||||||| || |||||| ||| ||||||||||||||||| ||||||| |||| ||| | ||||||||| ||| ||||||| |||||||||||||    
T  3715451 taacccattttggttgggctagtggtattgacttgagatctgggagtatgcttctcgtcgaggtctcaagttcgattctctccagtgtcaattt 3715544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 199 - 295
Target Start/End: Complemental strand, 31623067 - 31622971
Alignment:
Q  199 aacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaatttgggt 295  Q
    ||||||||||||||||||   |||||||| |||| ||  |||||||||||||||||| ||||||||| |||||| || | || ||||||||||||||    
T  31623067 aacccacttgggttggtccggtggtattggcttgggacctgggagtgtgctcctcctcgaggtctcaggtttgaatcactccggtgtcaatttgggt 31622971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 199 - 277
Target Start/End: Original strand, 33549104 - 33549182
Alignment:
Q  199 aacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctc 277  Q
    |||||||||||||||||||  |||||||| |||| ||  |||||||||||||||||| ||||||||| ||| |||||||    
T  33549104 aacccacttgggttggtctggtggtattggcttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctc 33549182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 198 - 291
Target Start/End: Original strand, 12633008 - 12633101
Alignment:
Q  198 taacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaattt 291  Q
    ||||||||||||||||  |   || |||||||||| |||||||||||||||||||| | ||| ||||||||| ||||||| ||| |||||||||    
T  12633008 taacccacttgggttgtcccggtgatattgacttgggatttgggagtgtgctcctcttcgagatctcatgttcgattctctccaatgtcaattt 12633101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 199 - 291
Target Start/End: Complemental strand, 12234583 - 12234491
Alignment:
Q  199 aacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaattt 291  Q
    ||||||||| |||||| ||  ||||||||||||| ||  ||||||||||||||  || ||||||||| ||| ||||||| |||||||||||||    
T  12234583 aacccacttaggttggcctggtggtattgacttgggacctgggagtgtgctccctctcgaggtctcaggttcgattctctccagtgtcaattt 12234491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 206 - 293
Target Start/End: Original strand, 8268645 - 8268732
Alignment:
Q  206 ttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaatttgg 293  Q
    |||||||||||| ||||| ||| |||||||||||||||||||||||||||  | ||| |||||| ||||||  | ||||| |||||||    
T  8268645 ttgggttggtctgatggtgttgccttgagatttgggagtgtgctcctcctcaaagtcacatgttcgattctatctagtgtgaatttgg 8268732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 198 - 273
Target Start/End: Original strand, 13661520 - 13661594
Alignment:
Q  198 taacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgat 273  Q
    |||||||| |||||||||||| || ||||| ||||| | ||||||||||||||||||| ||||||||| |||||||    
T  13661520 taacccacatgggttggtctagtg-tattggcttgacacttgggagtgtgctcctcctcgaggtctcaggtttgat 13661594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 198 - 297
Target Start/End: Original strand, 30127399 - 30127498
Alignment:
Q  198 taacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaatttgggtag 297  Q
    ||||||||||||||||||||  |||||||| |||| | | |||||||||||||||| | ||||||||| ||| ||||||  || ||| |||||| |||||    
T  30127399 taacccacttgggttggtctggtggtattggcttggggtctgggagtgtgctcctcttcgaggtctcaggttcgattctttccggtgccaatttaggtag 30127498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 201 - 291
Target Start/End: Complemental strand, 32613214 - 32613124
Alignment:
Q  201 cccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaattt 291  Q
    |||||||||||||| ||  ||||||||||||| | | ||||||||||||||| ||  || ||||||||| |||||||  ||||||||||||    
T  32613214 cccacttgggttggcctggtggtattgacttggggtctgggagtgtgctccttctcaagatctcatgttcgattctcttcagtgtcaattt 32613124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 199 - 292
Target Start/End: Complemental strand, 12188379 - 12188286
Alignment:
Q  199 aacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaatttg 292  Q
    |||||||||||||||| ||| |||||||| |||| ||  ||||||||||||||||||  |||| ||| ||| ||||||| | |||| |||||||    
T  12188379 aacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaaggtttcaagttcgattctctctagtgccaatttg 12188286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 240 - 291
Target Start/End: Original strand, 346571 - 346622
Alignment:
Q  240 ggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaattt 291  Q
    |||||||||| ||||| ||||||||||||| |||||||||| ||||||||||    
T  346571 ggagtgtgcttctcctcgaggtctcatgttcgattctcacccgtgtcaattt 346622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 203 - 277
Target Start/End: Complemental strand, 6776679 - 6776605
Alignment:
Q  203 cacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctc 277  Q
    |||||||||||| ||  |||||||| |||| ||| |||| ||||||||||||| || |||||| |||||||||||    
T  6776679 cacttgggttggcctggtggtattggcttgggatctgggggtgtgctcctcctcgatgtctcaagtttgattctc 6776605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 199 - 308
Target Start/End: Complemental strand, 14200023 - 14199914
Alignment:
Q  199 aacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaatttgggtaga 298  Q
    |||||| |||||||| ||||  ||||| | ||||||| |||||||||||||||||||  ||||||||  || |||||   | ||||||||||||||| ||    
T  14200023 aacccatttgggttgctctagaggtataggcttgagacttgggagtgtgctcctcctcaaggtctcagattcgattccttctagtgtcaatttgggtgga 14199924  T
Q  299 ataatatagc 308  Q
     |||| ||||    
T  14199923 ctaatttagc 14199914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 238 - 295
Target Start/End: Complemental strand, 14278148 - 14278091
Alignment:
Q  238 tgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaatttgggt 295  Q
    |||||||| |||||||||| |||||||| ||||||||||| |  ||||||||||||||    
T  14278148 tgggagtgcgctcctccttaaggtctcaggtttgattctctctggtgtcaatttgggt 14278091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 206 - 254
Target Start/End: Complemental strand, 3968263 - 3968215
Alignment:
Q  206 ttgggttggtctaatggtattgacttgagatttgggagtgtgctcctcc 254  Q
    ||||||||||||| |||||||||||||||| ||  ||||||||||||||    
T  3968263 ttgggttggtctattggtattgacttgagactttagagtgtgctcctcc 3968215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 197 - 277
Target Start/End: Complemental strand, 13227236 - 13227156
Alignment:
Q  197 ataacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctc 277  Q
    |||||||||||||||||| |   ||||||||   |||||| |||||||||||||||||| || |||||| ||| |||||||    
T  13227236 ataacccacttgggttggccatgtggtattggtatgagatctgggagtgtgctcctcctcgaagtctcaagttcgattctc 13227156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 295
Target Start/End: Original strand, 14557962 - 14558057
Alignment:
Q  199 aacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaatttgggt 295  Q
    |||||||||||||||||||  |||| ||| |||| ||  ||| ||||||||||||||   ||||||| ||| ||||||| || ||||||||||||||    
T  14557962 aacccacttgggttggtctggtggtgttggcttgggacctggaagtgtgctcctcctccgggtctcaggttcgattctc-ccggtgtcaatttgggt 14558057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 229 - 269
Target Start/End: Complemental strand, 15951348 - 15951308
Alignment:
Q  229 cttgagatttgggagtgtgctcctccttgaggtctcatgtt 269  Q
    |||||||||||||||||||||||||||  ||||||||||||    
T  15951348 cttgagatttgggagtgtgctcctcctcaaggtctcatgtt 15951308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 220 - 295
Target Start/End: Original strand, 6385883 - 6385958
Alignment:
Q  220 tggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaatttgggt 295  Q
    ||||||||||||| ||  ||||| ||||||||||||| |||||||| ||| ||||||| || |||  |||||||||    
T  6385883 tggtattgacttgggacctgggactgtgctcctccttaaggtctcaggttcgattctctccggtgctaatttgggt 6385958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 200 - 291
Target Start/End: Complemental strand, 6758497 - 6758406
Alignment:
Q  200 acccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaattt 291  Q
    ||||||||| ||||| ||  |||||||| |||  |||||||||||||||||| ||| ||||||||| | | ||||||| |  ||||||||||    
T  6758497 acccacttgtgttggcctggtggtattggcttaggatttgggagtgtgctccacctcgaggtctcaagatcgattctctctggtgtcaattt 6758406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 199 - 290
Target Start/End: Original strand, 21418470 - 21418561
Alignment:
Q  199 aacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaatt 290  Q
    |||||| ||||||||| ||  |||||||| |||| || |||||||||||||||||||  | |||||| ||| ||||||| | |||| |||||    
T  21418470 aacccagttgggttggcctggtggtattggcttgggacttgggagtgtgctcctcctccatgtctcaagttcgattctccctagtgccaatt 21418561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 199 - 265
Target Start/End: Original strand, 3779339 - 3779405
Alignment:
Q  199 aacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctca 265  Q
    ||||||||| |||||  ||| |||||||| ||||||| |||||||||||||||| ||  ||||||||    
T  3779339 aacccacttaggttgacctagtggtattggcttgagacttgggagtgtgctccttctcaaggtctca 3779405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 235 - 277
Target Start/End: Complemental strand, 18562678 - 18562636
Alignment:
Q  235 atttgggagtgtgctcctccttgaggtctcatgtttgattctc 277  Q
    ||||||||||||||||||||||||| | ||| |||||||||||    
T  18562678 atttgggagtgtgctcctccttgagatttcaggtttgattctc 18562636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 199 - 261
Target Start/End: Complemental strand, 24641266 - 24641204
Alignment:
Q  199 aacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggt 261  Q
    |||||| |||||||||  |  ||||||||||||| ||| |||||||||||||||||| |||||    
T  24641266 aacccatttgggttggcttggtggtattgacttgggatctgggagtgtgctcctcctcgaggt 24641204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 297
Target Start/End: Original strand, 9626073 - 9626130
Alignment:
Q  240 ggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaatttgggtag 297  Q
    ||||| |||||||||| ||||||||||||| ||||||| || ||||||| || |||||    
T  9626073 ggagtatgctcctcctcgaggtctcatgttcgattctctccggtgtcaacttaggtag 9626130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 291
Target Start/End: Original strand, 16405124 - 16405177
Alignment:
Q  238 tgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaattt 291  Q
    |||||||||||| ||||| |||||||||  || |||||||||| ||||||||||    
T  16405124 tgggagtgtgcttctcctcgaggtctcagtttcgattctcacctgtgtcaattt 16405177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 199 - 277
Target Start/End: Complemental strand, 15399 - 15321
Alignment:
Q  199 aacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctc 277  Q
    |||||||||||||||||||  |||||||| |||| ||  |||||||||||||||||| ||||||||| ||| |||||||    
T  15399 aacccacttgggttggtctggtggtattggcttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctc 15321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 2)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 198 - 295
Target Start/End: Complemental strand, 41710 - 41613
Alignment:
Q  198 taacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaatttgggt 295  Q
    ||||||||||||||||| ||| |||||||| |||||||| || |||| |||||||||| ||||||||| |||  |||||| |   |||||||||||||    
T  41710 taacccacttgggttggcctagtggtattggcttgagatctgagagtatgctcctcctcgaggtctcaggttcaattctctctgatgtcaatttgggt 41613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 199 - 253
Target Start/End: Complemental strand, 44180 - 44126
Alignment:
Q  199 aacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctc 253  Q
    ||||||||| ||||| |||| || ||||| |||||||| ||||||||||||||||    
T  44180 aacccacttaggttgatctattgatattggcttgagatctgggagtgtgctcctc 44126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 220 - 295
Target Start/End: Complemental strand, 13101 - 13026
Alignment:
Q  220 tggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaatttgggt 295  Q
    |||||||| |||||||| ||||||||||||||||||  |||||||| ||| ||||||| ||  |||||||||||||    
T  13101 tggtattggcttgagatctgggagtgtgctcctcctcaaggtctcaggttcgattctctccgatgtcaatttgggt 13026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 199 - 253
Target Start/End: Original strand, 24053 - 24107
Alignment:
Q  199 aacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctc 253  Q
    |||||||||||||||| ||||||||||||||||| || || ||||||||||||||    
T  24053 aacccacttgggttggcctaatggtattgacttgggacttaggagtgtgctcctc 24107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0517 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0517
Description:

Target: scaffold0517; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 199 - 293
Target Start/End: Complemental strand, 7802 - 7708
Alignment:
Q  199 aacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaatttgg 293  Q
    |||| ||||||||||||||  |||||||| |||||||  ||  ||||||||||||||| |||||||| ||| ||||||  || ||| ||||||||    
T  7802 aaccaacttgggttggtctggtggtattggcttgagacctgaaagtgtgctcctccttaaggtctcaagttcgattctatccggtgccaatttgg 7708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 198 - 276
Target Start/End: Complemental strand, 19924 - 19846
Alignment:
Q  198 taacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattct 276  Q
    |||||||||||  ||||  | ||||||||| |||| ||| ||||||| |||||||||||||||||||| ||| ||||||    
T  19924 taacccacttgaattggcatgatggtattggcttgggatctgggagtctgctcctccttgaggtctcaagttcgattct 19846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0299 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 220 - 277
Target Start/End: Original strand, 11549 - 11606
Alignment:
Q  220 tggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctc 277  Q
    |||||||| |||| ||| |||||||||||||||||| ||||||||| ||| |||||||    
T  11549 tggtattggcttgggatctgggagtgtgctcctcctcgaggtctcaggttcgattctc 11606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 220 - 293
Target Start/End: Complemental strand, 43387 - 43314
Alignment:
Q  220 tggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaatttgg 293  Q
    |||||||| |||| || ||||||||||| |||| ||| |||||||||||| ||||| |  ||||||||||||||    
T  43387 tggtattggcttgggacttgggagtgtgttccttcttaaggtctcatgttcgattcccttcagtgtcaatttgg 43314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0172 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 295
Target Start/End: Complemental strand, 15853 - 15757
Alignment:
Q  199 aacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaatttgggt 295  Q
    |||||||||  ||||| ||  |||||||| |||| ||||| ||||| ||||||||||  |||||||| |||||||||||  | ||| ||||||||||    
T  15853 aacccacttaagttggcctggtggtattggcttgggattttggagtatgctcctcctcaaggtctcaagtttgattctccgcggtgccaatttgggt 15757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0368 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0368
Description:

Target: scaffold0368; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 240 - 291
Target Start/End: Complemental strand, 15000 - 14949
Alignment:
Q  240 ggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaattt 291  Q
    |||||||||||||||| |||||||||| |||||||||| || ||| ||||||    
T  15000 ggagtgtgctcctcctcgaggtctcatatttgattctctccggtgacaattt 14949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 209 - 292
Target Start/End: Complemental strand, 25413 - 25330
Alignment:
Q  209 ggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaatttg 292  Q
    |||| ||||| |||||||| ||||||| |||||||||||||||| ||  |||||||| ||| |||| || |  |||||||||||    
T  25413 ggttcgtctagtggtattggcttgagacttgggagtgtgctccttctcaaggtctcaggttcgattatctctggtgtcaatttg 25330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 240 - 291
Target Start/End: Complemental strand, 45794 - 45743
Alignment:
Q  240 ggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaattt 291  Q
    |||||||| ||||||||||||||||||||| ||||||| |  ||||||||||    
T  45794 ggagtgtgttcctccttgaggtctcatgttcgattctctctggtgtcaattt 45743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 220 - 262
Target Start/End: Complemental strand, 157042 - 157000
Alignment:
Q  220 tggtattgacttgagatttgggagtgtgctcctccttgaggtc 262  Q
    |||||||| |||||||| |||||||||||||||||| ||||||    
T  157042 tggtattggcttgagatctgggagtgtgctcctcctcgaggtc 157000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 221 - 291
Target Start/End: Original strand, 49328 - 49398
Alignment:
Q  221 ggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaattt 291  Q
    ||||||| |||| |||||| ||||||||||||| | ||||| ||| ||| ||||||| || ||||||||||    
T  49328 ggtattggcttgggatttgagagtgtgctcctcttcgaggtatcaggttcgattctctccggtgtcaattt 49398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 263
Target Start/End: Complemental strand, 8695 - 8654
Alignment:
Q  222 gtattgacttgagatttgggagtgtgctcctccttgaggtct 263  Q
    |||||| |||| |||||||||||||| |||||||||||||||    
T  8695 gtattggcttgggatttgggagtgtggtcctccttgaggtct 8654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0300 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0300
Description:

Target: scaffold0300; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 308
Target Start/End: Original strand, 4348 - 4449
Alignment:
Q  207 tgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaatttgggtagaataatata 306  Q
    |||||||  ||| |||||| | |||| ||||||||||||||||||| ||| |||| | | ||| ||||| | | ||||||||||||||| || |||| ||    
T  4348 tgggttgccctagtggtataggcttgggatttgggagtgtgctccttcttaaggttttaggttcgattccctctagtgtcaatttgggtggactaattta 4447  T
Q  307 gc 308  Q
    ||    
T  4448 gc 4449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 276
Target Start/End: Original strand, 92967 - 93024
Alignment:
Q  219 atggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattct 276  Q
    ||||||||||||||  || |||||||||| ||||||||||||||| | ||| ||||||    
T  92967 atggtattgacttggaatctgggagtgtgatcctccttgaggtctgaggttcgattct 93024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 308
Target Start/End: Original strand, 112282 - 112391
Alignment:
Q  199 aacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaatttgggtaga 298  Q
    |||||||||||||||| ||  | |||||| ||||  || |||||||||| ||||| ||||||||| | ||| ||||||| || ||| |||||| ||| ||    
T  112282 aacccacttgggttggcctggttgtattggcttggaatctgggagtgtggtcctctttgaggtctgaggttcgattctctccggtgccaatttaggtgga 112381  T
Q  299 ataatatagc 308  Q
     |||| ||||    
T  112382 ctaatttagc 112391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 206 - 291
Target Start/End: Complemental strand, 163078 - 162993
Alignment:
Q  206 ttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagtgtcaattt 291  Q
    ||||||||||||| |||| |||||||  ||  || |||||||||||||| | |||||| | ||| ||||||| || ||||||||||    
T  163078 ttgggttggtctagtggttttgacttatgacctgagagtgtgctcctccataaggtctgaggttcgattctctccggtgtcaattt 162993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 199 - 283
Target Start/End: Complemental strand, 2546 - 2462
Alignment:
Q  199 aacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctccttgaggtctcatgtttgattctcaccagt 283  Q
    |||||| |||||||||||   ||||||||  ||  ||| ||||||||||||||||||  |||||||| ||| ||||||| |||||    
T  2546 aacccatttgggttggtccggtggtattggttttggatctgggagtgtgctcctcctcaaggtctcaggttcgattctccccagt 2462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 199 - 255
Target Start/End: Complemental strand, 42596 - 42540
Alignment:
Q  199 aacccacttgggttggtctaatggtattgacttgagatttgggagtgtgctcctcct 255  Q
    |||||| ||||||||| ||| |||||||||||||  || ||||||| ||||||||||    
T  42596 aacccagttgggttggcctagtggtattgacttggaatctgggagtatgctcctcct 42540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University