View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13112_high_13 (Length: 313)

Name: NF13112_high_13
Description: NF13112
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13112_high_13
NF13112_high_13
[»] chr3 (42 HSPs)
chr3 (3-299)||(54468845-54469141)
chr3 (12-268)||(54468954-54469210)
chr3 (15-192)||(54469111-54469285)
chr3 (12-268)||(11227959-11228212)
chr3 (13-298)||(54468768-54469050)
chr3 (13-286)||(11228097-11228367)
chr3 (12-268)||(11228037-11228290)
chr3 (12-268)||(11228193-11228446)
chr3 (94-268)||(11240568-11240742)
chr3 (13-192)||(11227957-11228133)
chr3 (12-291)||(11228326-11228602)
chr3 (12-268)||(11228427-11228680)
chr3 (94-266)||(11240882-11241054)
chr3 (12-268)||(11228271-11228524)
chr3 (66-286)||(54459161-54459378)
chr3 (13-291)||(11241013-11241288)
chr3 (66-293)||(54468617-54468841)
chr3 (12-166)||(11227905-11228056)
chr3 (94-287)||(11240705-11240898)
chr3 (12-166)||(11241216-11241367)
chr3 (137-268)||(54459479-54459610)
chr3 (66-192)||(54459477-54459600)
chr3 (94-266)||(11241194-11241366)
chr3 (94-166)||(54459125-54459197)
chr3 (12-193)||(54459176-54459354)
chr3 (127-266)||(11240804-11240943)
chr3 (66-194)||(11240486-11240611)
chr3 (94-159)||(49745127-49745192)
chr3 (133-266)||(54459337-54459470)
chr3 (13-85)||(54459125-54459197)
chr3 (66-191)||(54459793-54459915)
chr3 (12-268)||(11240490-11240743)
chr3 (146-266)||(54459874-54459994)
chr3 (224-268)||(54469191-54469235)
chr3 (137-268)||(54459557-54459688)
chr3 (137-268)||(54459794-54459925)
chr3 (127-268)||(11240958-11241099)
chr3 (137-190)||(11241426-11241479)
chr3 (12-85)||(54459818-54459891)
chr3 (139-191)||(11241581-11241633)
chr3 (13-41)||(49745127-49745155)
chr3 (13-111)||(54459480-54459575)


Alignment Details
Target: chr3 (Bit Score: 269; Significance: 1e-150; HSPs: 42)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 3 - 299
Target Start/End: Complemental strand, 54469141 - 54468845
Alignment:
Q  3 agaagcatagggtcttggttcaaaatctttattggctcctttattttctgtaacatcaatattattgtctccatatgctgaaacgtaatttggtcttggt 102  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54469141 agaaacattgggtcttggttcaaaatctttattggctcctttattttctgtaacatcaatattattgtctccatatgctgaaacgtaatttggtcttggt 54469042  T
Q  103 tcaaaatctgtattggctcctttattttccttaacatcaatatcattgtctccataagctgaaacatttggtcttggtttgaaatctttaacgactttct 202  Q
    |||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54469041 tcaaaatccgtattggctcctttattttccttaacatcaataccattgtctccataagctgaaacatttggtcttggtttgaaatctttaacgactttct 54468942  T
Q  203 tctttcccttaacttctacaccattgtctccatatgctgaaacattgggtcttggttcaaaatcttcaatgattcccttctttttcttagcttcaac 299  Q
    |||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  54468941 tctttcccttaacttctacaccattgtctccatatgctgaaacattgtatcttggttcaaaatcttcagtgattcccttctttttcttagcttcaac 54468845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 12 - 268
Target Start/End: Complemental strand, 54469210 - 54468954
Alignment:
Q  12 gggtcttggttcaaaatctttattggctcctttattttctgtaacatcaatattattgtctccatatgctgaaacgtaatttggtcttggttcaaaatct 111  Q
    |||||||||||||||||||||| || |||||||||||||  |||||||||||| | | |||||||| || |||||   ||| ||||||||||||||||||    
T  54469210 gggtcttggttcaaaatctttactgactcctttattttccttaacatcaatatcactatctccataagcagaaac---attgggtcttggttcaaaatct 54469114  T
Q  112 gtattggctcctttattttccttaacatcaatatcattgtctccataagctgaaac---atttggtcttggtttgaaatctttaacgactttcttctttc 208  Q
     |||||||||||||||||||  |||||||||||| |||||||||||| ||||||||   ||||||||||||||  |||||  ||  | ||   || |||     
T  54469113 ttattggctcctttattttctgtaacatcaatattattgtctccatatgctgaaacgtaatttggtcttggttcaaaatccgtattggctcctttatttt 54469014  T
Q  209 ccttaacttctacaccattgtctccatatgctgaaacattgggtcttggttcaaaatctt 268  Q
    ||||||| || | ||||||||||||||| ||||||||||| ||||||||||  |||||||    
T  54469013 ccttaacatcaataccattgtctccataagctgaaacatttggtcttggtttgaaatctt 54468954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 15 - 192
Target Start/End: Complemental strand, 54469285 - 54469111
Alignment:
Q  15 tcttggttcaaaatctttattggctcctttattttctgtaacatcaatattattgtctccatatgctgaaacgtaatttggtcttggttcaaaatctgta 114  Q
    ||||||||||||| |||||||| || ||||||||||||||||||| |||| ||||| |||||||| ||||||||   | |||||||||||||||||| ||    
T  54469285 tcttggttcaaaagctttattgacttctttattttctgtaacatcgatatcattgtttccatatgttgaaacgt---tgggtcttggttcaaaatcttta 54469189  T
Q  115 ttggctcctttattttccttaacatcaatatcattgtctccataagctgaaacatttggtcttggtttgaaatcttta 192  Q
     || ||||||||||||||||||||||||||||| | ||||||||||| |||||||| ||||||||||  |||||||||    
T  54469188 ctgactcctttattttccttaacatcaatatcactatctccataagcagaaacattgggtcttggttcaaaatcttta 54469111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 12 - 268
Target Start/End: Complemental strand, 11228212 - 11227959
Alignment:
Q  12 gggtcttggttcaaaatctttattggctcctttattttctgtaacatcaatattattgtctccatatgctgaaacgtaatttggtcttggttcaaaatct 111  Q
    ||||| ||||||||||||||||   ||||| || |||||  | ||||| || | |||||||||||| ||||||| ||   ||||||||||||||||||||    
T  11228212 gggtcgtggttcaaaatctttagcagctcccttcttttcattcacatctatgtcattgtctccataagctgaaatgt---ttggtcttggttcaaaatct 11228116  T
Q  112 gtattggctcctttattttccttaacatcaatatcattgtctccataagctgaaacatttggtcttggtttgaaatctttaacgactttcttctttccct 211  Q
     || ||||||| || |||||||| |||||||||||||||||||||||||||||||  || ||||||||||  ||||||||| || ||  ||||||| | |    
T  11228115 ttagtggctcccttcttttccttgacatcaatatcattgtctccataagctgaaatgttgggtcttggttcaaaatctttagcggctcccttcttttctt 11228016  T
Q  212 taacttctacaccattgtctccatatgctgaaacattgggtcttggttcaaaatctt 268  Q
    |||| || |   ||||||||||||| |||||||  |||||||| |||||||||||||    
T  11228015 taacatcaatctcattgtctccataagctgaaatgttgggtctaggttcaaaatctt 11227959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 13 - 298
Target Start/End: Complemental strand, 54469050 - 54468768
Alignment:
Q  13 ggtcttggttcaaaatctttattggctcctttattttctgtaacatcaatattattgtctccatatgctgaaacgtaatttggtcttggttcaaaatctg 112  Q
    |||||||||||||||||  |||||||||||||||||||  |||||||||||  |||||||||||| ||||||||   ||||||||||||||  ||||||     
T  54469050 ggtcttggttcaaaatccgtattggctcctttattttccttaacatcaataccattgtctccataagctgaaac---atttggtcttggtttgaaatctt 54468954  T
Q  113 tattggctcctttattttccttaacatcaatatcattgtctccataagctgaaacatttggtcttggtttgaaatctttaacgactttcttctttccctt 212  Q
    ||  | ||   || ||| ||||||| || | | ||||||||||||| |||||||||||   ||||||||  ||||||| |  || |  |||||||  |||    
T  54468953 taacgactttcttctttcccttaacttctacaccattgtctccatatgctgaaacattgtatcttggttcaaaatcttcagtgattcccttctttttctt 54468854  T
Q  213 aacttctacaccattgtctccatatgctgaaacattgggtcttggttcaaaatcttcaatgattcccttctttttcttagcttcaa 298  Q
    | |||| ||  ||||||||||||| ||||||||||||||||||||||||||||| ||||| | ||||||||| | |||||| ||||    
T  54468853 agcttcaacgtcattgtctccataagctgaaacattgggtcttggttcaaaatcatcaataactcccttcttatccttagcatcaa 54468768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 13 - 286
Target Start/End: Complemental strand, 11228367 - 11228097
Alignment:
Q  13 ggtcttggttcaaaatctttattggctcctttattttctgtaacatcaatattattgtctccatatgctgaaacgtaatttggtcttggttcaaaatctg 112  Q
    |||| |||||||||||||||| ||||||| || |||||  |||||||||| | |||||||||||| ||||||| ||   | |||| |||||||||||||     
T  11228367 ggtcgtggttcaaaatctttagtggctcccttcttttccttaacatcaatctcattgtctccataagctgaaatgt---tgggtcgtggttcaaaatctt 11228271  T
Q  113 tattggctcctttattttccttaacatcaatatcattgtctccataagctgaaacatttggtcttggtttgaaatctttaacgactttcttctttccctt 212  Q
    || | ||||| || ||||| |||||||| || ||||||||||||||||||||||  || |||| |||||  ||||||||| |  ||  ||||||| | ||    
T  11228270 tagtagctcccttcttttcattaacatctatgtcattgtctccataagctgaaatgttgggtcgtggttcaaaatctttagcagctcccttcttttcatt 11228171  T
Q  213 aacttctacaccattgtctccatatgctgaaacattgggtcttggttcaaaatcttcaatgattcccttctttt 286  Q
     || ||||   ||||||||||||| |||||||  || ||||||||||||||||||| | ||  |||||||||||    
T  11228170 cacatctatgtcattgtctccataagctgaaatgtttggtcttggttcaaaatctttagtggctcccttctttt 11228097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 12 - 268
Target Start/End: Complemental strand, 11228290 - 11228037
Alignment:
Q  12 gggtcttggttcaaaatctttattggctcctttattttctgtaacatcaatattattgtctccatatgctgaaacgtaatttggtcttggttcaaaatct 111  Q
    ||||| |||||||||||||||| | ||||| || |||||  ||||||| || | |||||||||||| ||||||| |   || |||| |||||||||||||    
T  11228290 gggtcgtggttcaaaatctttagtagctcccttcttttcattaacatctatgtcattgtctccataagctgaaatg---ttgggtcgtggttcaaaatct 11228194  T
Q  112 gtattggctcctttattttccttaacatcaatatcattgtctccataagctgaaacatttggtcttggtttgaaatctttaacgactttcttctttccct 211  Q
     ||   ||||| || ||||| || ||||| || ||||||||||||||||||||||  |||||||||||||  |||||||||  | ||  ||||||| |||    
T  11228193 ttagcagctcccttcttttcattcacatctatgtcattgtctccataagctgaaatgtttggtcttggttcaaaatctttagtggctcccttcttttcct 11228094  T
Q  212 taacttctacaccattgtctccatatgctgaaacattgggtcttggttcaaaatctt 268  Q
    | || || | | ||||||||||||| |||||||  ||||||||||||||||||||||    
T  11228093 tgacatcaatatcattgtctccataagctgaaatgttgggtcttggttcaaaatctt 11228037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 12 - 268
Target Start/End: Complemental strand, 11228446 - 11228193
Alignment:
Q  12 gggtcttggttcaaaatctttattggctcctttattttctgtaacatcaatattattgtctccatatgctgaaacgtaatttggtcttggttcaaaatct 111  Q
    ||||| ||||||||||||||||   ||||| || |||||  | ||||| || | |||||||||||| ||||||| ||   |||||| |||||||||||||    
T  11228446 gggtcgtggttcaaaatctttagcagctcccttcttttcattcacatctatgtcattgtctccataagctgaaatgt---ttggtcgtggttcaaaatct 11228350  T
Q  112 gtattggctcctttattttccttaacatcaatatcattgtctccataagctgaaacatttggtcttggtttgaaatctttaacgactttcttctttccct 211  Q
     || ||||||| || ||||||||||||||||| ||||||||||||||||||||||  || |||| |||||  |||||||||    ||  ||||||| | |    
T  11228349 ttagtggctcccttcttttccttaacatcaatctcattgtctccataagctgaaatgttgggtcgtggttcaaaatctttagtagctcccttcttttcat 11228250  T
Q  212 taacttctacaccattgtctccatatgctgaaacattgggtcttggttcaaaatctt 268  Q
    |||| ||||   ||||||||||||| |||||||  ||||||| ||||||||||||||    
T  11228249 taacatctatgtcattgtctccataagctgaaatgttgggtcgtggttcaaaatctt 11228193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 94 - 268
Target Start/End: Complemental strand, 11240742 - 11240568
Alignment:
Q  94 ggtcttggttcaaaatctgtattggctcctttattttccttaacatcaatatcattgtctccataagctgaaacatttggtcttggtttgaaatctttaa 193  Q
    |||||||||||||||||| || || |||| || ||||  ||||||||||   |||||||| | |||||||||| ||| |||||||||| ||||||||| |    
T  11240742 ggtcttggttcaaaatctttagtgactcccttcttttttttaacatcaacgacattgtcttcgtaagctgaaatattaggtcttggttcgaaatctttga 11240643  T
Q  194 cgactttcttctttcccttaacttctacaccattgtctccatatgctgaaacattgggtcttggttcaaaatctt 268  Q
    |||||||||||||| ||||||| ||||   |||||||||||||||||||||  ||||||| ||| ||||||||||    
T  11240642 cgactttcttcttttccttaacatctatggcattgtctccatatgctgaaatgttgggtcgtggctcaaaatctt 11240568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 13 - 192
Target Start/End: Complemental strand, 11228133 - 11227957
Alignment:
Q  13 ggtcttggttcaaaatctttattggctcctttattttctgtaacatcaatattattgtctccatatgctgaaacgtaatttggtcttggttcaaaatctg 112  Q
    ||||||||||||||||||||| ||||||| || |||||  | |||||||||| |||||||||||| ||||||| ||   | ||||||||||||||||||     
T  11228133 ggtcttggttcaaaatctttagtggctcccttcttttccttgacatcaatatcattgtctccataagctgaaatgt---tgggtcttggttcaaaatctt 11228037  T
Q  113 tattggctcctttattttccttaacatcaatatcattgtctccataagctgaaacatttggtcttggtttgaaatcttta 192  Q
    ||  |||||| || ||||| ||||||||||| ||||||||||||||||||||||  || ||||| ||||  |||||||||    
T  11228036 tagcggctcccttcttttctttaacatcaatctcattgtctccataagctgaaatgttgggtctaggttcaaaatcttta 11227957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 12 - 291
Target Start/End: Complemental strand, 11228602 - 11228326
Alignment:
Q  12 gggtcttggttcaaaatctttattggctcctttattttctgtaacatcaatattattgtctccatatgctgaaacgtaatttggtcttggttcaaaatct 111  Q
    ||||| |||||||||||||||| ||||||| || |||||  |||||||||| | |||||||||||| ||||||| ||   | |||| |||||||||||||    
T  11228602 gggtcgtggttcaaaatctttagtggctcccttcttttccttaacatcaatctcattgtctccataagctgaaatgt---tgggtcgtggttcaaaatct 11228506  T
Q  112 gtattggctcctttattttccttaacatcaatatcattgtctccataagctgaaacatttggtcttggtttgaaatctttaacgactttcttctttccct 211  Q
     || | ||||| || ||||| |||||||| || ||||||||||||||||||||||  || |||| |||||  ||||||||| |  ||  ||||||| | |    
T  11228505 ttagtagctcccttcttttcattaacatctatgtcattgtctccataagctgaaatgttgggtcgtggttcaaaatctttagcagctcccttcttttcat 11228406  T
Q  212 taacttctacaccattgtctccatatgctgaaacattgggtcttggttcaaaatcttcaatgattcccttctttttctta 291  Q
    | || ||||   ||||||||||||| |||||||  || |||| |||||||||||||| | ||  ||||||||||| ||||    
T  11228405 tcacatctatgtcattgtctccataagctgaaatgtttggtcgtggttcaaaatctttagtggctcccttcttttcctta 11228326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 12 - 268
Target Start/End: Complemental strand, 11228680 - 11228427
Alignment:
Q  12 gggtcttggttcaaaatctttattggctcctttattttctgtaacatcaatattattgtctccatatgctgaaacgtaatttggtcttggttcaaaatct 111  Q
    ||||||||||||||||  |||| ||||||| || |||||  |||||||||| |  || |||||||| || |||| ||   | |||| |||||||||||||    
T  11228680 gggtcttggttcaaaaattttagtggctccattgttttccttaacatcaatctcgttatctccataagccgaaatgt---tgggtcgtggttcaaaatct 11228584  T
Q  112 gtattggctcctttattttccttaacatcaatatcattgtctccataagctgaaacatttggtcttggtttgaaatctttaacgactttcttctttccct 211  Q
     || ||||||| || ||||||||||||||||| ||||||||||||||||||||||  || |||| |||||  |||||||||    ||  ||||||| | |    
T  11228583 ttagtggctcccttcttttccttaacatcaatctcattgtctccataagctgaaatgttgggtcgtggttcaaaatctttagtagctcccttcttttcat 11228484  T
Q  212 taacttctacaccattgtctccatatgctgaaacattgggtcttggttcaaaatctt 268  Q
    |||| ||||   ||||||||||||| |||||||  ||||||| ||||||||||||||    
T  11228483 taacatctatgtcattgtctccataagctgaaatgttgggtcgtggttcaaaatctt 11228427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 94 - 266
Target Start/End: Complemental strand, 11241054 - 11240882
Alignment:
Q  94 ggtcttggttcaaaatctgtattggctcctttattttccttaacatcaatatcattgtctccataagctgaaacatttggtcttggtttgaaatctttaa 193  Q
    ||||||||||||||||||  | || |||| || |||| ||||||||||||  ||||||||||  ||||||||| | | |||||||||| ||||||||| |    
T  11241054 ggtcttggttcaaaatcttcagtgactcccttctttttcttaacatcaatgacattgtctccgcaagctgaaatactaggtcttggttcgaaatctttga 11240955  T
Q  194 cgactttcttctttcccttaacttctacaccattgtctccatatgctgaaacattgggtcttggttcaaaatc 266  Q
    || ||||||||||| ||||||| ||||   ||| ||||||||| || |||| |||||||||||||||||||||    
T  11240954 cggctttcttcttttccttaacatctatgacatcgtctccataagccgaaatattgggtcttggttcaaaatc 11240882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 12 - 268
Target Start/End: Complemental strand, 11228524 - 11228271
Alignment:
Q  12 gggtcttggttcaaaatctttattggctcctttattttctgtaacatcaatattattgtctccatatgctgaaacgtaatttggtcttggttcaaaatct 111  Q
    ||||| |||||||||||||||| | ||||| || |||||  ||||||| || | |||||||||||| ||||||| ||   | |||| |||||||||||||    
T  11228524 gggtcgtggttcaaaatctttagtagctcccttcttttcattaacatctatgtcattgtctccataagctgaaatgt---tgggtcgtggttcaaaatct 11228428  T
Q  112 gtattggctcctttattttccttaacatcaatatcattgtctccataagctgaaacatttggtcttggtttgaaatctttaacgactttcttctttccct 211  Q
     ||   ||||| || ||||| || ||||| || ||||||||||||||||||||||  ||||||| |||||  |||||||||  | ||  ||||||| |||    
T  11228427 ttagcagctcccttcttttcattcacatctatgtcattgtctccataagctgaaatgtttggtcgtggttcaaaatctttagtggctcccttcttttcct 11228328  T
Q  212 taacttctacaccattgtctccatatgctgaaacattgggtcttggttcaaaatctt 268  Q
    |||| || |   ||||||||||||| |||||||  ||||||| ||||||||||||||    
T  11228327 taacatcaatctcattgtctccataagctgaaatgttgggtcgtggttcaaaatctt 11228271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 66 - 286
Target Start/End: Complemental strand, 54459378 - 54459161
Alignment:
Q  66 attgtctccatatgctgaaacgtaatttggtcttggttcaaaatctgtattggctcctttattttccttaacatcaatatcattgtctccataagctgaa 165  Q
    |||||||||||| ||||||| ||   | |||||||| ||||||||  |  ||||||| |||||||||||||||||||| |||||||||||||||||||||    
T  54459378 attgtctccataagctgaaatgt---tgggtcttggctcaaaatcgttggtggctcccttattttccttaacatcaatgtcattgtctccataagctgaa 54459282  T
Q  166 acatttggtcttggtttgaaatctttaacgactttcttctttcccttaacttctacaccattgtctccatatgctgaaacattgggtcttggttcaaaat 265  Q
    | ||| ||||||||||  |||||||| ||   |||||||||| | | | | || |   |||| |||||||| ||||||| ||| ||||| ||||||||||    
T  54459281 atattgggtcttggttcaaaatctttgactggtttcttcttttcatcagcatcaatgacattttctccataagctgaaatattaggtctaggttcaaaat 54459182  T
Q  266 cttcaatgattcccttctttt 286  Q
    ||| ||||  ||| |||||||    
T  54459181 ctttaatggctccattctttt 54459161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 13 - 291
Target Start/End: Complemental strand, 11241288 - 11241013
Alignment:
Q  13 ggtcttggttcaaaatctttattggctcctttattttctgtaacatcaatattattgtctccatatgctgaaacgtaatttggtcttggttcaaaatctg 112  Q
    ||||||||||||||||| ||| |||||||  | |||||  || |||||||   |||||||||||| || |||| ||   | |||| ||||||||||||      
T  11241288 ggtcttggttcaaaatcattagtggctcccctcttttccttagcatcaatggcattgtctccataagccgaaatgt---tgggtcgtggttcaaaatcct 11241192  T
Q  113 tattggctcctttattttccttaacatcaatatcattgtctccataagctgaaacatttggtcttggtttgaaatctttaacgactttcttctttccctt 212  Q
    ||  |||| | || ||||| | |||||| || ||||| | ||||||||||||||  |||||||||||||||||| | |||  | ||| ||||||| | ||    
T  11241191 taccggctgccttcttttcatgaacatcgatgtcattctttccataagctgaaatgtttggtcttggtttgaaaccattagtggcttgcttcttttcttt 11241092  T
Q  213 aacttctacaccattgtctccatatgctgaaacattgggtcttggttcaaaatcttcaatgattcccttctttttctta 291  Q
     || || |   |||| |||||||| | ||||| ||||||||||||||||||||||||| ||| ||||||||||||||||    
T  11241091 gacatcaatgtcattttctccataagttgaaatattgggtcttggttcaaaatcttcagtgactcccttctttttctta 11241013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 66 - 293
Target Start/End: Complemental strand, 54468841 - 54468617
Alignment:
Q  66 attgtctccatatgctgaaacgtaatttggtcttggttcaaaatctgtattggctcctttattttccttaacatcaatatcattgtctccataagctgaa 165  Q
    |||||||||||| ||||||||   ||| |||||||||||||||||   | |  |||| || || |||||| ||||||| |||||  ||||||||||||||    
T  54468841 attgtctccataagctgaaac---attgggtcttggttcaaaatcatcaataactcccttcttatccttagcatcaatttcatttgctccataagctgaa 54468745  T
Q  166 acatttggtcttggtttgaaatctttaacgactttcttctttcccttaacttctacaccattgtctccatatgctgaaacattgggtcttggttcaaaat 265  Q
    ||||| ||||||||||  || ||||| |||||| |||||||| ||| | | |  |   |||| ||| |||||  ||||||||| ||||||||||||||||    
T  54468744 acattaggtcttggttcaaagtctttgacgactctcttcttttcctcagcattaatgtcattatcttcatattttgaaacatttggtcttggttcaaaat 54468645  T
Q  266 cttcaatgattcccttctttttcttagc 293  Q
     || | ||| |||||||||| |||||||    
T  54468644 ttttagtgactcccttctttctcttagc 54468617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 12 - 166
Target Start/End: Complemental strand, 11228056 - 11227905
Alignment:
Q  12 gggtcttggttcaaaatctttattggctcctttattttctgtaacatcaatattattgtctccatatgctgaaacgtaatttggtcttggttcaaaatct 111  Q
    ||||||||||||||||||||||  |||||| || |||||| |||||||||| | |||||||||||| ||||||| ||   | ||||| ||||||||||||    
T  11228056 gggtcttggttcaaaatctttagcggctcccttcttttctttaacatcaatctcattgtctccataagctgaaatgt---tgggtctaggttcaaaatct 11227960  T
Q  112 gtattggctcctttattttccttaacatcaatatcattgtctccataagctgaaa 166  Q
     || || |||| || |||||| || ||| ||| ||||| ||||| ||||||||||    
T  11227959 ttagtgtctccattcttttccgtagcattaatgtcattatctccgtaagctgaaa 11227905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 94 - 287
Target Start/End: Complemental strand, 11240898 - 11240705
Alignment:
Q  94 ggtcttggttcaaaatctgtattggctcctttattttccttaacatcaatatcattgtctccataagctgaaacatttggtcttggtttgaaatctttaa 193  Q
    |||||||||||||||||  ||  |||| | || ||||| |||||||| |||||||| ||||||||||||||||  || |||||||||| |||||| ||||    
T  11240898 ggtcttggttcaaaatccttagcggctgccttcttttcattaacatcgatatcattttctccataagctgaaatgttgggtcttggttcgaaatcattaa 11240799  T
Q  194 cgactttcttctttcccttaacttctacaccattgtctccatatgctgaaacattgggtcttggttcaaaatcttcaatgattcccttcttttt 287  Q
     |  || |||||||   || || ||     |||| ||||| || ||||||| ||||||||||||||||||||||| | ||| ||||||||||||    
T  11240798 tggtttgcttcttttgtttgacatcactgtcattttctccgtaagctgaaatattgggtcttggttcaaaatctttagtgactcccttcttttt 11240705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 12 - 166
Target Start/End: Complemental strand, 11241367 - 11241216
Alignment:
Q  12 gggtcttggttcaaaatctttattggctcctttattttctgtaacatcaatattattgtctccatatgctgaaacgtaatttggtcttggttcaaaatct 111  Q
    |||||||||||| ||||||||  ||||||| |  ||||   |||||||||| | |||||||||||| ||||||| ||   |||||||||||||||||||     
T  11241367 gggtcttggttcgaaatctttgatggctccctcctttttattaacatcaatgtcattgtctccataagctgaaatgt---ttggtcttggttcaaaatca 11241271  T
Q  112 gtattggctcctttattttccttaacatcaatatcattgtctccataagctgaaa 166  Q
     || |||||||  | ||||||||| |||||||  |||||||||||||||| ||||    
T  11241270 ttagtggctcccctcttttccttagcatcaatggcattgtctccataagccgaaa 11241216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 137 - 268
Target Start/End: Complemental strand, 54459610 - 54459479
Alignment:
Q  137 catcaatatcattgtctccataagctgaaacatttggtcttggtttgaaatctttaacgactttcttctttcccttaacttctacaccattgtctccata 236  Q
    |||||||  ||||||||||||||||||||| |||||||||||||| ||||||||||    ||  ||||||| | ||||| || |   ||||||||||| |    
T  54459610 catcaatggcattgtctccataagctgaaatatttggtcttggttcgaaatctttagtatctcccttcttttcattaacatcaatgtcattgtctccaaa 54459511  T
Q  237 tgctgaaacattgggtcttggttcaaaatctt 268  Q
     |||||||  ||||||||||||||||||||||    
T  54459510 agctgaaatgttgggtcttggttcaaaatctt 54459479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 66 - 192
Target Start/End: Complemental strand, 54459600 - 54459477
Alignment:
Q  66 attgtctccatatgctgaaacgtaatttggtcttggttcaaaatctgtattggctcctttattttccttaacatcaatatcattgtctccataagctgaa 165  Q
    |||||||||||| |||||||    ||||||||||||||| |||||| || |  |||| || ||||| ||||||||||| |||||||||||| ||||||||    
T  54459600 attgtctccataagctgaaat---atttggtcttggttcgaaatctttagtatctcccttcttttcattaacatcaatgtcattgtctccaaaagctgaa 54459504  T
Q  166 acatttggtcttggtttgaaatcttta 192  Q
    |  || ||||||||||  |||||||||    
T  54459503 atgttgggtcttggttcaaaatcttta 54459477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 94 - 266
Target Start/End: Complemental strand, 11241366 - 11241194
Alignment:
Q  94 ggtcttggttcaaaatctgtattggctcctttattttccttaacatcaatatcattgtctccataagctgaaacatttggtcttggtttgaaatctttaa 193  Q
    ||||||||||| |||||| |  ||||||| |  ||||  ||||||||||| ||||||||||||||||||||||  |||||||||||||  ||||| |||     
T  11241366 ggtcttggttcgaaatctttgatggctccctcctttttattaacatcaatgtcattgtctccataagctgaaatgtttggtcttggttcaaaatcattag 11241267  T
Q  194 cgactttcttctttcccttaacttctacaccattgtctccatatgctgaaacattgggtcttggttcaaaatc 266  Q
     | ||  | ||||| ||||| | || |   ||||||||||||| || ||||  ||||||| ||||||||||||    
T  11241266 tggctcccctcttttccttagcatcaatggcattgtctccataagccgaaatgttgggtcgtggttcaaaatc 11241194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 94 - 166
Target Start/End: Complemental strand, 54459197 - 54459125
Alignment:
Q  94 ggtcttggttcaaaatctgtattggctcctttattttccttaacatcaatatcattgtctccataagctgaaa 166  Q
    ||||| |||||||||||| || ||||||| || ||||| || |||||||| ||||||||||||||||||||||    
T  54459197 ggtctaggttcaaaatctttaatggctccattcttttcttttacatcaatgtcattgtctccataagctgaaa 54459125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 12 - 193
Target Start/End: Complemental strand, 54459354 - 54459176
Alignment:
Q  12 gggtcttggttcaaaatctttattggctcctttattttctgtaacatcaatattattgtctccatatgctgaaacgtaatttggtcttggttcaaaatct 111  Q
    ||||||||| |||||||| ||  ||||||| ||||||||  |||||||||| | |||||||||||| |||||||    ||| ||||||||||||||||||    
T  54459354 gggtcttggctcaaaatcgttggtggctcccttattttccttaacatcaatgtcattgtctccataagctgaaa---tattgggtcttggttcaaaatct 54459258  T
Q  112 gt-attggctcctttattttccttaacatcaatatcattgtctccataagctgaaacatttggtcttggtttgaaatctttaa 193  Q
     | | ||| | | || ||||| | | |||||||  |||| |||||||||||||||| ||| ||||| ||||  ||||||||||    
T  54459257 ttgactggtttc-ttcttttcatcagcatcaatgacattttctccataagctgaaatattaggtctaggttcaaaatctttaa 54459176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 127 - 266
Target Start/End: Complemental strand, 11240943 - 11240804
Alignment:
Q  127 ttttccttaacatcaatatcattgtctccataagctgaaacatttggtcttggtttgaaatctttaacgactttcttctttcccttaacttctacaccat 226  Q
    |||||||||||||| ||  ||| |||||||||||| |||| ||| ||||||||||  ||||| ||| || ||  ||||||| | ||||| || | | |||    
T  11240943 ttttccttaacatctatgacatcgtctccataagccgaaatattgggtcttggttcaaaatccttagcggctgccttcttttcattaacatcgatatcat 11240844  T
Q  227 tgtctccatatgctgaaacattgggtcttggttcaaaatc 266  Q
    | |||||||| |||||||  |||||||||||||| |||||    
T  11240843 tttctccataagctgaaatgttgggtcttggttcgaaatc 11240804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 66 - 194
Target Start/End: Complemental strand, 11240611 - 11240486
Alignment:
Q  66 attgtctccatatgctgaaacgtaatttggtcttggttcaaaatctgtattggctcctttattttccttaacatcaatatcattgtctccataagctgaa 165  Q
    |||||||||||||||||||| ||   | |||| ||| ||||||||| ||  ||  ||||| |||||||||   ||||| |||||||||||||||||||||    
T  11240611 attgtctccatatgctgaaatgt---tgggtcgtggctcaaaatctttaacggtacctttcttttccttattttcaatgtcattgtctccataagctgaa 11240515  T
Q  166 acatttggtcttggtttgaaatctttaac 194  Q
    |  || ||||||||||  |||||||||||    
T  11240514 atgttgggtcttggttcaaaatctttaac 11240486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 94 - 159
Target Start/End: Original strand, 49745127 - 49745192
Alignment:
Q  94 ggtcttggttcaaaatctgtattggctcctttattttccttaacatcaatatcattgtctccataa 159  Q
    |||||||||||||||||| |||||||||| || ||| ||||  ||||||| |||||||||||||||    
T  49745127 ggtcttggttcaaaatctttattggctcccttgtttgcctttgcatcaatctcattgtctccataa 49745192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 133 - 266
Target Start/End: Complemental strand, 54459470 - 54459337
Alignment:
Q  133 ttaacatcaatatcattgtctccataagctgaaacatttggtcttggtttgaaatctttaacgactttcttctttcccttaacttctacaccattgtctc 232  Q
    ||||||||||| ||||| ||||||||||||||||  ||||||||||||| ||||| || |||   ||||||| ||   ||| | || |   |||||||||    
T  54459470 ttaacatcaatgtcattttctccataagctgaaatgtttggtcttggttggaaatattcaactggtttcttcattttattatcatcaatgacattgtctc 54459371  T
Q  233 catatgctgaaacattgggtcttggttcaaaatc 266  Q
    |||| |||||||  ||||||||||| ||||||||    
T  54459370 cataagctgaaatgttgggtcttggctcaaaatc 54459337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 13 - 85
Target Start/End: Complemental strand, 54459197 - 54459125
Alignment:
Q  13 ggtcttggttcaaaatctttattggctcctttattttctgtaacatcaatattattgtctccatatgctgaaa 85  Q
    ||||| ||||||||||||||| ||||||| || |||||| | |||||||| | |||||||||||| |||||||    
T  54459197 ggtctaggttcaaaatctttaatggctccattcttttcttttacatcaatgtcattgtctccataagctgaaa 54459125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 66 - 191
Target Start/End: Complemental strand, 54459915 - 54459793
Alignment:
Q  66 attgtctccatatgctgaaacgtaatttggtcttggttcaaaatctgtattggctcctttattttccttaacatcaatatcattgtctccataagctgaa 165  Q
    |||||||||||| ||||||| ||   | |||||||| ||||||||  |  || |||| || ||||| ||||||||||| |||||||||||||||||||||    
T  54459915 attgtctccataagctgaaatgt---tgggtcttggctcaaaatcgttggtgactcccttcttttctttaacatcaatgtcattgtctccataagctgaa 54459819  T
Q  166 acatttggtcttggtttgaaatcttt 191  Q
    |  || | ||||||||  ||||||||    
T  54459818 atgttggttcttggttcaaaatcttt 54459793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 12 - 268
Target Start/End: Complemental strand, 11240743 - 11240490
Alignment:
Q  12 gggtcttggttcaaaatctttattggctcctttattttctgtaacatcaatattattgtctccatatgctgaaacgtaatttggtcttggttcaaaatct 111  Q
    |||||||||||||||||||||| || |||| || |||| | |||||||||    ||||||| | || |||||||    ||| ||||||||||| ||||||    
T  11240743 gggtcttggttcaaaatctttagtgactcccttcttttttttaacatcaacgacattgtcttcgtaagctgaaat---attaggtcttggttcgaaatct 11240647  T
Q  112 gtattggctcctttattttccttaacatcaatatcattgtctccataagctgaaacatttggtcttggtttgaaatctttaacgactttcttctttccct 211  Q
     |   | ||   || |||||||||||||| ||  ||||||||||||| |||||||  || |||| ||| |  ||||||||||||      |||||| |||    
T  11240646 ttgacgactttcttcttttccttaacatctatggcattgtctccatatgctgaaatgttgggtcgtggctcaaaatctttaacggtacctttcttttcct 11240547  T
Q  212 taacttctacaccattgtctccatatgctgaaacattgggtcttggttcaaaatctt 268  Q
    ||  ||| |   ||||||||||||| |||||||  ||||||||||||||||||||||    
T  11240546 tattttcaatgtcattgtctccataagctgaaatgttgggtcttggttcaaaatctt 11240490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 146 - 266
Target Start/End: Complemental strand, 54459994 - 54459874
Alignment:
Q  146 cattgtctccataagctgaaacatttggtcttggtttgaaatctttaacgactttcttctttcccttaacttctacaccattgtctccatatgctgaaac 245  Q
    ||||||||||||||||||||| | |||||||||||| |||||| | |||   ||||||| ||   ||| | || |   ||||||||||||| |||||||     
T  54459994 cattgtctccataagctgaaatagttggtcttggttggaaatcgtcaactggtttcttcattttattagcatcaatgacattgtctccataagctgaaat 54459895  T
Q  246 attgggtcttggttcaaaatc 266  Q
     ||||||||||| ||||||||    
T  54459894 gttgggtcttggctcaaaatc 54459874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 268
Target Start/End: Complemental strand, 54469235 - 54469191
Alignment:
Q  224 cattgtctccatatgctgaaacattgggtcttggttcaaaatctt 268  Q
    |||||| |||||||| |||||| ||||||||||||||||||||||    
T  54469235 cattgtttccatatgttgaaacgttgggtcttggttcaaaatctt 54469191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 137 - 268
Target Start/End: Complemental strand, 54459688 - 54459557
Alignment:
Q  137 catcaatatcattgtctccataagctgaaacatttggtcttggtttgaaatctttaacgactttcttctttcccttaacttctacaccattgtctccata 236  Q
    |||||||  |||||||||||||||| ||||  |||||| ||||||| ||||||||||    ||||||| || | | | | || |   |||||||||||||    
T  54459688 catcaatgacattgtctccataagccgaaatgtttggttttggtttaaaatctttaattggtttcttcatttcatcatcatcaatggcattgtctccata 54459589  T
Q  237 tgctgaaacattgggtcttggttcaaaatctt 268  Q
     ||||||| ||| ||||||||||| |||||||    
T  54459588 agctgaaatatttggtcttggttcgaaatctt 54459557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 137 - 268
Target Start/End: Complemental strand, 54459925 - 54459794
Alignment:
Q  137 catcaatatcattgtctccataagctgaaacatttggtcttggtttgaaatctttaacgactttcttctttcccttaacttctacaccattgtctccata 236  Q
    |||||||  |||||||||||||||||||||  || |||||||| |  ||||| ||   ||||  ||||||| | ||||| || |   |||||||||||||    
T  54459925 catcaatgacattgtctccataagctgaaatgttgggtcttggctcaaaatcgttggtgactcccttcttttctttaacatcaatgtcattgtctccata 54459826  T
Q  237 tgctgaaacattgggtcttggttcaaaatctt 268  Q
     |||||||  |||| |||||||||||||||||    
T  54459825 agctgaaatgttggttcttggttcaaaatctt 54459794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 268
Target Start/End: Complemental strand, 11241099 - 11240958
Alignment:
Q  127 ttttccttaacatcaatatcattgtctccataagctgaaacatttggtcttggtttgaaatctttaacgactttcttctttcccttaacttctacaccat 226  Q
    ||||| || |||||||| ||||| |||||||||| ||||| ||| ||||||||||  ||||||| |  ||||  |||||||  |||||| || |   |||    
T  11241099 ttttctttgacatcaatgtcattttctccataagttgaaatattgggtcttggttcaaaatcttcagtgactcccttctttttcttaacatcaatgacat 11241000  T
Q  227 tgtctccatatgctgaaacattgggtcttggttcaaaatctt 268  Q
    |||||||  | ||||||| | | ||||||||||| |||||||    
T  11240999 tgtctccgcaagctgaaatactaggtcttggttcgaaatctt 11240958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 137 - 190
Target Start/End: Complemental strand, 11241479 - 11241426
Alignment:
Q  137 catcaatatcattgtctccataagctgaaacatttggtcttggtttgaaatctt 190  Q
    ||||||| ||||||||||| ||||||||||  || |||||||||| ||||||||    
T  11241479 catcaatgtcattgtctccgtaagctgaaatgttgggtcttggttcgaaatctt 11241426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 85
Target Start/End: Complemental strand, 54459891 - 54459818
Alignment:
Q  12 gggtcttggttcaaaatctttattggctcctttattttctgtaacatcaatattattgtctccatatgctgaaa 85  Q
    ||||||||| |||||||| ||  || |||| || |||||| |||||||||| | |||||||||||| |||||||    
T  54459891 gggtcttggctcaaaatcgttggtgactcccttcttttctttaacatcaatgtcattgtctccataagctgaaa 54459818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 139 - 191
Target Start/End: Complemental strand, 11241633 - 11241581
Alignment:
Q  139 tcaatatcattgtctccataagctgaaacatttggtcttggtttgaaatcttt 191  Q
    |||||||||||||  ||||||||||||| |||||| |||||||  ||||||||    
T  11241633 tcaatatcattgttgccataagctgaaatatttggccttggttcaaaatcttt 11241581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 41
Target Start/End: Original strand, 49745127 - 49745155
Alignment:
Q  13 ggtcttggttcaaaatctttattggctcc 41  Q
    |||||||||||||||||||||||||||||    
T  49745127 ggtcttggttcaaaatctttattggctcc 49745155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 111
Target Start/End: Complemental strand, 54459575 - 54459480
Alignment:
Q  13 ggtcttggttcaaaatctttattggctcctttattttctgtaacatcaatattattgtctccatatgctgaaacgtaatttggtcttggttcaaaatct 111  Q
    ||||||||||| ||||||||| |  |||| || |||||  |||||||||| | |||||||||| | ||||||| |   || ||||||||||||||||||    
T  54459575 ggtcttggttcgaaatctttagtatctcccttcttttcattaacatcaatgtcattgtctccaaaagctgaaatg---ttgggtcttggttcaaaatct 54459480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University