View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13113_high_4 (Length: 270)

Name: NF13113_high_4
Description: NF13113
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13113_high_4
NF13113_high_4
[»] chr8 (61 HSPs)
chr8 (17-254)||(8054787-8055060)
chr8 (190-254)||(41996615-41996679)
chr8 (190-253)||(32104819-32104882)
chr8 (190-254)||(9270091-9270155)
chr8 (190-254)||(44295386-44295450)
chr8 (199-254)||(5457150-5457205)
chr8 (133-187)||(9992656-9992710)
chr8 (131-189)||(16937406-16937464)
chr8 (192-249)||(16996873-16996930)
chr8 (135-186)||(31874077-31874128)
chr8 (190-253)||(36545762-36545825)
chr8 (131-186)||(44295305-44295360)
chr8 (131-185)||(10042750-10042804)
chr8 (131-187)||(9270010-9270066)
chr8 (190-254)||(32412860-32412924)
chr8 (190-254)||(5989700-5989764)
chr8 (131-187)||(15665528-15665584)
chr8 (190-254)||(31874154-31874218)
chr8 (190-253)||(7269445-7269508)
chr8 (207-254)||(14115808-14115855)
chr8 (207-254)||(17019205-17019252)
chr8 (207-254)||(17549642-17549689)
chr8 (190-249)||(31147786-31147845)
chr8 (131-185)||(37658955-37659009)
chr8 (217-254)||(9992764-9992801)
chr8 (190-246)||(5917730-5917786)
chr8 (190-254)||(7281107-7281171)
chr8 (131-187)||(36545850-36545906)
chr8 (136-187)||(5989624-5989675)
chr8 (131-185)||(32256792-32256847)
chr8 (190-252)||(5328037-5328099)
chr8 (79-164)||(1810337-1810421)
chr8 (79-154)||(12329556-12329628)
chr8 (131-184)||(26937514-26937567)
chr8 (190-242)||(3680993-3681045)
chr8 (134-174)||(14115875-14115914)
chr8 (131-187)||(14530977-14531033)
chr8 (190-254)||(16937319-16937383)
chr8 (131-175)||(27534480-27534524)
chr8 (190-249)||(37129659-37129715)
chr8 (86-142)||(41996511-41996567)
chr8 (135-185)||(7269535-7269585)
chr8 (69-123)||(9501503-9501557)
chr8 (131-189)||(13977390-13977448)
chr8 (137-187)||(15237706-15237756)
chr8 (136-189)||(23766736-23766787)
chr8 (208-250)||(26582872-26582914)
chr8 (134-187)||(11655979-11656032)
chr8 (209-254)||(15827099-15827144)
chr8 (74-123)||(31202371-31202420)
chr8 (135-187)||(284544-284596)
chr8 (135-187)||(631281-631333)
chr8 (135-187)||(817093-817145)
chr8 (190-250)||(6833550-6833610)
chr8 (190-254)||(10042842-10042906)
chr8 (206-254)||(12244196-12244244)
chr8 (131-187)||(14327468-14327524)
chr8 (194-254)||(16808951-16809010)
chr8 (137-165)||(31147891-31147919)
chr8 (131-183)||(32061783-32061835)
chr8 (131-187)||(32920641-32920697)
[»] chr2 (64 HSPs)
chr2 (68-254)||(7640336-7640544)
chr2 (190-254)||(43929336-43929400)
chr2 (190-254)||(3390502-3390566)
chr2 (190-254)||(5930493-5930557)
chr2 (190-254)||(25771515-25771579)
chr2 (192-249)||(43566946-43567003)
chr2 (192-249)||(44167695-44167752)
chr2 (190-254)||(3603055-3603119)
chr2 (135-187)||(5930416-5930468)
chr2 (190-254)||(27024119-27024183)
chr2 (131-186)||(3390421-3390476)
chr2 (131-186)||(25771434-25771489)
chr2 (131-189)||(6089882-6089940)
chr2 (131-189)||(25516483-25516541)
chr2 (131-189)||(27191402-27191460)
chr2 (131-189)||(27841216-27841274)
chr2 (131-189)||(40125378-40125436)
chr2 (131-189)||(42105819-42105877)
chr2 (131-189)||(44167776-44167834)
chr2 (132-185)||(10589028-10589081)
chr2 (192-249)||(25516565-25516622)
chr2 (192-249)||(27191321-27191378)
chr2 (192-249)||(27841135-27841192)
chr2 (192-249)||(36508002-36508059)
chr2 (131-189)||(3464948-3465006)
chr2 (131-185)||(15674045-15674099)
chr2 (131-189)||(37883642-37883700)
chr2 (131-185)||(41176851-41176905)
chr2 (131-189)||(43566866-43566922)
chr2 (193-246)||(3465030-3465083)
chr2 (131-254)||(16879945-16880084)
chr2 (190-254)||(16992078-16992142)
chr2 (134-186)||(27024209-27024261)
chr2 (135-187)||(29812684-29812736)
chr2 (190-249)||(38822145-38822202)
chr2 (190-253)||(9715525-9715588)
chr2 (134-185)||(9715616-9715667)
chr2 (131-185)||(19581074-19581128)
chr2 (189-254)||(25237306-25237371)
chr2 (190-254)||(41842020-41842082)
chr2 (74-173)||(5754207-5754309)
chr2 (190-249)||(6089963-6090020)
chr2 (69-154)||(41797535-41797617)
chr2 (208-254)||(11931002-11931048)
chr2 (131-189)||(26491292-26491350)
chr2 (135-189)||(36507924-36507978)
chr2 (192-253)||(26491374-26491435)
chr2 (131-187)||(41841938-41841995)
chr2 (190-254)||(7443546-7443610)
chr2 (190-254)||(25623025-25623089)
chr2 (131-187)||(25623114-25623170)
chr2 (190-253)||(40125459-40125522)
chr2 (223-254)||(44951522-44951553)
chr2 (220-254)||(16720884-16720918)
chr2 (192-254)||(42105732-42105794)
chr2 (224-253)||(43929309-43929338)
chr2 (131-187)||(5071439-5071495)
chr2 (131-167)||(17037738-17037774)
chr2 (131-163)||(19953373-19953405)
chr2 (190-246)||(19953640-19953696)
chr2 (86-154)||(34416995-34417063)
chr2 (131-167)||(35353641-35353677)
chr2 (209-253)||(35353732-35353776)
chr2 (190-254)||(37883723-37883787)
[»] chr6 (36 HSPs)
chr6 (64-254)||(19759710-19759922)
chr6 (190-254)||(23843404-23843468)
chr6 (190-254)||(13234088-13234152)
chr6 (190-249)||(16913398-16913457)
chr6 (131-186)||(16913317-16913372)
chr6 (131-189)||(12576545-12576603)
chr6 (190-254)||(20845078-20845142)
chr6 (131-187)||(32457635-32457691)
chr6 (192-250)||(31748029-31748087)
chr6 (208-254)||(32457734-32457780)
chr6 (131-187)||(548934-548990)
chr6 (206-254)||(15128133-15128181)
chr6 (134-185)||(32804286-32804337)
chr6 (131-185)||(4663891-4663945)
chr6 (145-187)||(20845011-20845053)
chr6 (209-254)||(5417178-5417223)
chr6 (189-254)||(33194674-33194739)
chr6 (131-187)||(13234177-13234232)
chr6 (190-254)||(32804365-32804429)
chr6 (210-249)||(8633176-8633215)
chr6 (134-185)||(10744571-10744622)
chr6 (145-187)||(15128218-15128260)
chr6 (135-254)||(32574446-32574570)
chr6 (209-254)||(548846-548891)
chr6 (135-187)||(891581-891633)
chr6 (190-249)||(11426014-11426071)
chr6 (190-242)||(31804318-31804370)
chr6 (135-187)||(33194598-33194650)
chr6 (131-175)||(34020607-34020651)
chr6 (190-261)||(4663793-4663864)
chr6 (207-250)||(7049332-7049375)
chr6 (131-173)||(7049236-7049278)
chr6 (74-123)||(1302647-1302696)
chr6 (134-167)||(8644237-8644270)
chr6 (209-254)||(10744672-10744717)
chr6 (190-249)||(12576465-12576522)
[»] scaffold0722 (1 HSPs)
scaffold0722 (64-254)||(5506-5718)
[»] chr1 (60 HSPs)
chr1 (64-189)||(21326395-21326520)
chr1 (122-254)||(44562729-44562883)
chr1 (190-254)||(23320510-23320574)
chr1 (79-189)||(5832164-5832280)
chr1 (190-254)||(22344892-22344956)
chr1 (192-249)||(4564589-4564646)
chr1 (190-254)||(15276430-15276494)
chr1 (190-249)||(1768036-1768095)
chr1 (131-185)||(52839412-52839466)
chr1 (190-254)||(630764-630829)
chr1 (132-189)||(630852-630909)
chr1 (190-254)||(5832303-5832368)
chr1 (66-189)||(23320376-23320487)
chr1 (189-254)||(27469688-27469753)
chr1 (131-187)||(17579757-17579813)
chr1 (190-254)||(21326543-21326607)
chr1 (190-254)||(38646654-38646718)
chr1 (131-186)||(6212956-6213011)
chr1 (190-249)||(15698270-15698329)
chr1 (131-186)||(22344982-22345037)
chr1 (190-253)||(40488378-40488441)
chr1 (190-249)||(45659112-45659171)
chr1 (133-187)||(13691827-13691881)
chr1 (192-253)||(36621424-36621485)
chr1 (190-254)||(23257158-23257222)
chr1 (206-254)||(38644777-38644825)
chr1 (190-246)||(40992406-40992462)
chr1 (192-254)||(28213120-28213182)
chr1 (131-185)||(44514061-44514115)
chr1 (208-254)||(49651932-49651978)
chr1 (131-185)||(52839510-52839564)
chr1 (190-239)||(900192-900241)
chr1 (193-254)||(52752096-52752157)
chr1 (131-187)||(14717312-14717367)
chr1 (190-254)||(32539170-32539234)
chr1 (131-187)||(38646573-38646629)
chr1 (190-261)||(52839600-52839671)
chr1 (190-252)||(35077872-35077934)
chr1 (141-187)||(45659041-45659087)
chr1 (209-254)||(12967712-12967757)
chr1 (190-246)||(14717230-14717287)
chr1 (131-184)||(46589165-46589217)
chr1 (143-187)||(8893294-8893338)
chr1 (190-254)||(10877416-10877480)
chr1 (86-154)||(15791607-15791675)
chr1 (79-123)||(51417928-51417972)
chr1 (130-185)||(33177667-33177722)
chr1 (132-167)||(48655155-48655190)
chr1 (135-189)||(12148115-12148169)
chr1 (131-176)||(22032169-22032215)
chr1 (137-187)||(35077959-35078009)
chr1 (146-184)||(37685168-37685206)
chr1 (146-184)||(37700312-37700350)
chr1 (134-171)||(8937612-8937648)
chr1 (135-187)||(10877338-10877391)
chr1 (74-123)||(28678295-28678344)
chr1 (91-164)||(32784047-32784119)
chr1 (190-242)||(6212878-6212930)
chr1 (79-123)||(37825474-37825518)
chr1 (93-173)||(42276298-42276377)
[»] chr7 (67 HSPs)
chr7 (91-261)||(43807123-43807315)
chr7 (73-254)||(30992803-30993008)
chr7 (190-254)||(26017638-26017702)
chr7 (190-261)||(23732366-23732437)
chr7 (190-254)||(40775337-40775401)
chr7 (190-254)||(47749804-47749868)
chr7 (131-189)||(24470384-24470442)
chr7 (131-189)||(24475332-24475390)
chr7 (134-187)||(25855289-25855342)
chr7 (190-254)||(135125-135189)
chr7 (190-254)||(25855200-25855264)
chr7 (192-249)||(8611608-8611665)
chr7 (192-249)||(49166998-49167055)
chr7 (190-254)||(13008653-13008717)
chr7 (131-187)||(47749723-47749779)
chr7 (131-186)||(40775256-40775311)
chr7 (191-254)||(42490774-42490837)
chr7 (134-189)||(49166919-49166974)
chr7 (133-187)||(7985883-7985937)
chr7 (131-189)||(8611689-8611747)
chr7 (131-185)||(28015345-28015399)
chr7 (208-250)||(35661612-35661654)
chr7 (192-249)||(24475414-24475471)
chr7 (192-249)||(40476780-40476837)
chr7 (134-183)||(47156388-47156437)
chr7 (190-254)||(7985962-7986026)
chr7 (190-254)||(8319385-8319449)
chr7 (131-187)||(29804745-29804801)
chr7 (131-185)||(43483583-43483637)
chr7 (192-249)||(24470466-24470523)
chr7 (134-187)||(44681454-44681506)
chr7 (190-254)||(9933917-9933981)
chr7 (74-154)||(21990583-21990663)
chr7 (131-187)||(23732462-23732518)
chr7 (190-250)||(35141735-35141795)
chr7 (132-176)||(38649438-38649482)
chr7 (190-254)||(43483670-43483734)
chr7 (190-249)||(47156464-47156521)
chr7 (210-249)||(11001934-11001973)
chr7 (131-186)||(16263376-16263431)
chr7 (134-185)||(35141824-35141875)
chr7 (79-164)||(40761519-40761600)
chr7 (190-253)||(46918470-46918533)
chr7 (80-154)||(28665031-28665105)
chr7 (131-184)||(21329368-21329420)
chr7 (131-187)||(33530537-33530591)
chr7 (134-186)||(14734120-14734172)
chr7 (135-187)||(24045301-24045353)
chr7 (190-246)||(37399696-37399752)
chr7 (190-246)||(39090186-39090242)
chr7 (190-257)||(15123957-15124024)
chr7 (131-185)||(8319303-8319357)
chr7 (134-188)||(10250549-10250603)
chr7 (215-253)||(14734030-14734068)
chr7 (153-187)||(42490713-42490747)
chr7 (219-261)||(43098676-43098718)
chr7 (207-252)||(772530-772575)
chr7 (208-253)||(14707671-14707716)
chr7 (190-255)||(35135162-35135227)
chr7 (206-254)||(5025036-5025084)
chr7 (131-178)||(5025134-5025182)
chr7 (79-123)||(11832939-11832983)
chr7 (190-234)||(19895651-19895695)
chr7 (137-189)||(26017725-26017777)
chr7 (131-167)||(29804977-29805013)
chr7 (190-246)||(41748487-41748543)
chr7 (190-254)||(44681531-44681594)
[»] chr5 (51 HSPs)
chr5 (62-189)||(4726995-4727118)
chr5 (190-254)||(10924113-10924177)
chr5 (190-254)||(4726908-4726972)
chr5 (190-254)||(6887158-6887222)
chr5 (190-254)||(31645899-31645963)
chr5 (131-187)||(34893985-34894041)
chr5 (207-254)||(29310334-29310381)
chr5 (190-253)||(41063377-41063440)
chr5 (131-189)||(28618593-28618651)
chr5 (192-249)||(28618675-28618732)
chr5 (131-187)||(9035017-9035073)
chr5 (131-186)||(6887248-6887303)
chr5 (131-186)||(31645818-31645873)
chr5 (208-254)||(9034922-9034968)
chr5 (131-185)||(29310420-29310474)
chr5 (131-185)||(33486641-33486695)
chr5 (132-189)||(4070545-4070601)
chr5 (135-187)||(41358031-41358084)
chr5 (135-187)||(2415393-2415445)
chr5 (190-254)||(5378372-5378436)
chr5 (190-254)||(22397528-22397592)
chr5 (138-185)||(18472796-18472843)
chr5 (190-249)||(32390632-32390691)
chr5 (208-254)||(2415488-2415534)
chr5 (131-185)||(41554475-41554529)
chr5 (131-184)||(37424982-37425035)
chr5 (131-187)||(19646110-19646166)
chr5 (131-187)||(41988173-41988229)
chr5 (210-249)||(4070642-4070681)
chr5 (131-186)||(6647983-6648038)
chr5 (190-240)||(28500787-28500837)
chr5 (132-177)||(8812231-8812276)
chr5 (206-254)||(28423783-28423831)
chr5 (190-254)||(33486549-33486613)
chr5 (190-246)||(34893904-34893960)
chr5 (64-122)||(5378254-5378313)
chr5 (190-253)||(19646022-19646085)
chr5 (207-246)||(35906384-35906423)
chr5 (208-254)||(20270802-20270848)
chr5 (192-254)||(34866499-34866561)
chr5 (130-186)||(34873848-34873905)
chr5 (71-123)||(6682030-6682082)
chr5 (190-254)||(8812131-8812195)
chr5 (190-246)||(13007762-13007818)
chr5 (190-246)||(13079215-13079271)
chr5 (190-246)||(13080223-13080279)
chr5 (134-187)||(15710532-15710587)
chr5 (137-185)||(22397619-22397667)
chr5 (70-110)||(39179987-39180027)
chr5 (131-187)||(40565224-40565280)
chr5 (143-187)||(41063465-41063509)
[»] chr4 (68 HSPs)
chr4 (96-254)||(42971992-42972172)
chr4 (130-254)||(23067828-23067974)
chr4 (90-189)||(52555788-52555887)
chr4 (64-254)||(46716874-46717095)
chr4 (190-254)||(50003156-50003220)
chr4 (190-254)||(9474519-9474583)
chr4 (190-254)||(9661923-9661987)
chr4 (190-254)||(14542492-14542556)
chr4 (134-187)||(28588553-28588606)
chr4 (190-254)||(4634353-4634417)
chr4 (131-187)||(9661842-9661898)
chr4 (190-254)||(12519726-12519790)
chr4 (190-254)||(44375244-44375308)
chr4 (131-186)||(14542582-14542637)
chr4 (134-189)||(54420779-54420834)
chr4 (135-189)||(16991865-16991919)
chr4 (190-254)||(31601338-31601403)
chr4 (190-254)||(2945207-2945271)
chr4 (131-187)||(3673612-3673668)
chr4 (131-187)||(41486564-41486620)
chr4 (190-254)||(41486645-41486709)
chr4 (131-186)||(4634272-4634327)
chr4 (190-254)||(32189053-32189114)
chr4 (208-254)||(34115631-34115677)
chr4 (131-189)||(46728987-46729044)
chr4 (192-246)||(54420701-54420755)
chr4 (134-187)||(4959644-4959697)
chr4 (190-239)||(52555716-52555765)
chr4 (190-261)||(1657539-1657610)
chr4 (137-187)||(1646010-1646060)
chr4 (135-185)||(3169033-3169083)
chr4 (190-252)||(9549537-9549599)
chr4 (131-184)||(43156765-43156819)
chr4 (192-246)||(53903681-53903735)
chr4 (79-164)||(478121-478205)
chr4 (135-176)||(1657650-1657691)
chr4 (131-187)||(5388504-5388560)
chr4 (190-249)||(20961521-20961578)
chr4 (190-254)||(28990368-28990432)
chr4 (139-187)||(34115721-34115769)
chr4 (190-254)||(44021551-44021615)
chr4 (71-164)||(394384-394473)
chr4 (132-187)||(7242838-7242893)
chr4 (208-254)||(38434687-38434733)
chr4 (79-164)||(43244491-43244578)
chr4 (119-189)||(44375331-44375401)
chr4 (136-185)||(37869488-37869536)
chr4 (131-187)||(4622780-4622836)
chr4 (131-187)||(11817061-11817117)
chr4 (190-254)||(40859716-40859780)
chr4 (147-187)||(46775925-46775965)
chr4 (132-187)||(29577154-29577209)
chr4 (210-249)||(30470107-30470145)
chr4 (190-253)||(37869398-37869461)
chr4 (135-185)||(1124929-1124979)
chr4 (210-244)||(4622699-4622733)
chr4 (135-185)||(6408433-6408483)
chr4 (196-254)||(6789856-6789914)
chr4 (86-123)||(24825562-24825599)
chr4 (208-253)||(29589342-29589387)
chr4 (132-185)||(30416693-30416746)
chr4 (190-254)||(7242749-7242813)
chr4 (206-254)||(15729961-15730009)
chr4 (190-254)||(43156846-43156910)
chr4 (206-254)||(46728900-46728948)
chr4 (137-185)||(51646088-51646136)
chr4 (190-234)||(51646163-51646207)
chr4 (149-189)||(53903617-53903657)
[»] chr3 (64 HSPs)
chr3 (190-254)||(54240156-54240220)
chr3 (131-259)||(45664218-45664360)
chr3 (190-254)||(1165376-1165440)
chr3 (131-187)||(20201127-20201183)
chr3 (131-187)||(20203309-20203365)
chr3 (190-254)||(43029753-43029817)
chr3 (190-249)||(47914578-47914637)
chr3 (134-189)||(50519782-50519837)
chr3 (192-249)||(3088648-3088705)
chr3 (131-187)||(1165465-1165521)
chr3 (190-254)||(21803600-21803664)
chr3 (190-254)||(43839498-43839562)
chr3 (190-249)||(14741310-14741369)
chr3 (131-189)||(22286816-22286874)
chr3 (131-189)||(41882475-41882533)
chr3 (192-249)||(22286735-22286792)
chr3 (134-187)||(35501828-35501881)
chr3 (192-249)||(41882394-41882451)
chr3 (190-254)||(29182588-29182652)
chr3 (208-261)||(22893688-22893741)
chr3 (134-187)||(25374139-25374192)
chr3 (131-187)||(1220284-1220340)
chr3 (131-187)||(21803519-21803575)
chr3 (190-254)||(35501739-35501803)
chr3 (190-253)||(20201039-20201102)
chr3 (190-253)||(20203221-20203284)
chr3 (131-182)||(22844040-22844091)
chr3 (131-186)||(43029672-43029727)
chr3 (137-187)||(53426799-53426849)
chr3 (131-187)||(1806529-1806585)
chr3 (131-187)||(4019591-4019646)
chr3 (210-254)||(20251747-20251791)
chr3 (190-249)||(28995293-28995350)
chr3 (190-242)||(32089922-32089974)
chr3 (131-187)||(37051613-37051669)
chr3 (135-187)||(40462064-40462116)
chr3 (190-253)||(25374051-25374114)
chr3 (191-254)||(27831183-27831246)
chr3 (210-249)||(33977909-33977948)
chr3 (190-253)||(40365296-40365359)
chr3 (190-245)||(53426868-53426923)
chr3 (131-177)||(42106100-42106146)
chr3 (131-187)||(20251640-20251697)
chr3 (134-167)||(25939565-25939598)
chr3 (134-187)||(43242803-43242856)
chr3 (139-187)||(7656546-7656592)
chr3 (190-246)||(21585969-21586025)
chr3 (190-254)||(32237976-32238040)
chr3 (190-242)||(33076382-33076434)
chr3 (131-174)||(25631692-25631735)
chr3 (191-254)||(29776670-29776732)
chr3 (91-164)||(30156399-30156468)
chr3 (140-187)||(33070152-33070199)
chr3 (191-254)||(40461975-40462038)
chr3 (135-185)||(2598076-2598126)
chr3 (134-187)||(34766973-34767024)
chr3 (132-185)||(40797023-40797075)
chr3 (134-187)||(43839587-43839638)
chr3 (222-254)||(7656495-7656527)
chr3 (189-253)||(25939460-25939524)
chr3 (159-187)||(29182677-29182705)
chr3 (135-185)||(33977994-33978041)
chr3 (210-250)||(34767075-34767115)
chr3 (192-232)||(50519861-50519901)
[»] scaffold0316 (2 HSPs)
scaffold0316 (190-254)||(12183-12247)
scaffold0316 (141-187)||(12272-12318)
[»] scaffold0157 (1 HSPs)
scaffold0157 (190-254)||(1121-1185)
[»] scaffold0024 (1 HSPs)
scaffold0024 (190-254)||(36599-36663)
[»] scaffold0045 (2 HSPs)
scaffold0045 (131-189)||(9715-9773)
scaffold0045 (217-249)||(9642-9674)
[»] scaffold0012 (1 HSPs)
scaffold0012 (190-254)||(244706-244770)
[»] scaffold0665 (2 HSPs)
scaffold0665 (207-254)||(1107-1154)
scaffold0665 (134-174)||(1174-1213)
[»] scaffold0150 (1 HSPs)
scaffold0150 (191-254)||(10291-10354)
[»] scaffold1294 (1 HSPs)
scaffold1294 (136-184)||(774-822)
[»] scaffold0340 (1 HSPs)
scaffold0340 (137-189)||(11844-11896)
[»] scaffold0018 (1 HSPs)
scaffold0018 (190-254)||(137038-137102)
[»] scaffold0011 (2 HSPs)
scaffold0011 (134-187)||(11011-11064)
scaffold0011 (209-254)||(11107-11148)
[»] scaffold0536 (1 HSPs)
scaffold0536 (91-154)||(2839-2902)
[»] scaffold0627 (1 HSPs)
scaffold0627 (208-254)||(6765-6811)


Alignment Details
Target: chr8 (Bit Score: 127; Significance: 1e-65; HSPs: 61)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 17 - 254
Target Start/End: Complemental strand, 8055060 - 8054787
Alignment:
Q  17 ttaagatgtttgaatgaatttttaaaactaaatttgataaagatatcaagccttttt-------------ctctttctcttatctcattctcaaacccta 103  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||             |||||||||||||||| |||||||||||||    
T  8055060 ttaagatgtttgaatgaatttttaaaactaaatttgataaagatatcaagcttttttttaagccttttttctctttctcttatctccttctcaaacccta 8054961  T
Q  104 gccgtcattcctttcttcttttcatcggaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttctat-------------- 189  Q
    ||||||| ||||||||||||||| | |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||                  
T  8054960 gccgtcactcctttcttcttttcgttggaggggtgatttagggtcaatttttgacccaaaattatccctctaactcgtttttctatttcccttatattga 8054861  T
Q  190 --------attttcacatctgttacg-ttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 254  Q
            |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  8054860 aataagtgattttcacatctgttacgtttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 8054787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 190 - 254
Target Start/End: Original strand, 41996615 - 41996679
Alignment:
Q  190 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 254  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  41996615 attttcacatctgttacgttttttattttgtgatttcatcgtcttcgtgcgacgttggtttgttc 41996679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 190 - 253
Target Start/End: Complemental strand, 32104882 - 32104819
Alignment:
Q  190 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgtt 253  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  32104882 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtacgacgttggtttgtt 32104819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 190 - 254
Target Start/End: Original strand, 9270091 - 9270155
Alignment:
Q  190 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 254  Q
    |||||||||||| || ||||||||||||||||||||||| |||||||||||||||||||||||||    
T  9270091 attttcacatctatttcgttttttattttgtgatttcgttgtcttcgtgcgacgttggtttgttc 9270155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 190 - 254
Target Start/End: Original strand, 44295386 - 44295450
Alignment:
Q  190 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 254  Q
    |||||||||||| ||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  44295386 attttcacatctattttgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 44295450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 199 - 254
Target Start/End: Original strand, 5457150 - 5457205
Alignment:
Q  199 tctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 254  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  5457150 tctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggttagttc 5457205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 133 - 187
Target Start/End: Original strand, 9992656 - 9992710
Alignment:
Q  133 ggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 187  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  9992656 ggggtgatttagggtcaatttttgacccaaaatcacccctctaactcgtttttct 9992710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 131 - 189
Target Start/End: Complemental strand, 16937464 - 16937406
Alignment:
Q  131 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttctat 189  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  16937464 gaggggtgatttagggtcaatttttgatccaaaatcatccctctaacttgtttttctat 16937406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 192 - 249
Target Start/End: Complemental strand, 16996930 - 16996873
Alignment:
Q  192 tttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtt 249  Q
    |||||||||| || ||||||||||||||||||||||||||||||||||||||||||||    
T  16996930 tttcacatctatttcgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtt 16996873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 135 - 186
Target Start/End: Original strand, 31874077 - 31874128
Alignment:
Q  135 ggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttc 186  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  31874077 ggtgatttagggtcaatttttgacccaaaatcacccctctaactcgtttttc 31874128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 190 - 253
Target Start/End: Complemental strand, 36545825 - 36545762
Alignment:
Q  190 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgtt 253  Q
    |||||||||||| || |||||||||||||||||||| |||||||| ||||||||||||||||||    
T  36545825 attttcacatctatttcgttttttattttgtgattttgtcgtctttgtgcgacgttggtttgtt 36545762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 131 - 186
Target Start/End: Original strand, 44295305 - 44295360
Alignment:
Q  131 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttc 186  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||| |||||||    
T  44295305 gaggggtgatttagggtcaatttttgacccaaaatcatctctctaacttgtttttc 44295360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 131 - 185
Target Start/End: Original strand, 10042750 - 10042804
Alignment:
Q  131 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgttttt 185  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||    
T  10042750 gaggggtgatttatggtcaatttttgacccaaaatcacccctctaactcgttttt 10042804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 131 - 187
Target Start/End: Original strand, 9270010 - 9270066
Alignment:
Q  131 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 187  Q
    ||||||||||||| | ||||||||||||||||||||| |||||||||||||||||||    
T  9270010 gaggggtgatttatgatcaatttttgacccaaaatcacccctctaactcgtttttct 9270066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 190 - 254
Target Start/End: Original strand, 32412860 - 32412924
Alignment:
Q  190 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 254  Q
    |||||||||| | ||  ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  32412860 attttcacatttattttgttttttatcttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 32412924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 190 - 254
Target Start/End: Original strand, 5989700 - 5989764
Alignment:
Q  190 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 254  Q
    |||||||||||| || |||||||||||||||||||| ||||| || ||||||||||||| |||||    
T  5989700 attttcacatctatttcgttttttattttgtgattttgtcgttttagtgcgacgttggtatgttc 5989764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 131 - 187
Target Start/End: Original strand, 15665528 - 15665584
Alignment:
Q  131 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 187  Q
    |||||||||||||||||||| ||||||| |||||||| |||||||||| ||||||||    
T  15665528 gaggggtgatttagggtcaacttttgacacaaaatcacccctctaacttgtttttct 15665584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 190 - 254
Target Start/End: Original strand, 31874154 - 31874218
Alignment:
Q  190 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 254  Q
    |||||||||||| ||  ||||||||||||||||||| |||||||| |||| ||||||||||||||    
T  31874154 attttcacatctattttgttttttattttgtgattttgtcgtctttgtgcaacgttggtttgttc 31874218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 190 - 253
Target Start/End: Complemental strand, 7269508 - 7269445
Alignment:
Q  190 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgtt 253  Q
    |||||||||||| ||  ||||||||||||||||||| |||||| | ||||||||||||||||||    
T  7269508 attttcacatctattttgttttttattttgtgattttgtcgtcatagtgcgacgttggtttgtt 7269445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 207 - 254
Target Start/End: Complemental strand, 14115855 - 14115808
Alignment:
Q  207 gttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 254  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||||    
T  14115855 gttttttattttgtgatttcgtcatcttcgtgtgacgttggtttgttc 14115808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 207 - 254
Target Start/End: Original strand, 17019205 - 17019252
Alignment:
Q  207 gttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 254  Q
    ||||||||||||||||||| |||||||| |||||||||||||||||||    
T  17019205 gttttttattttgtgatttggtcgtcttagtgcgacgttggtttgttc 17019252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 207 - 254
Target Start/End: Original strand, 17549642 - 17549689
Alignment:
Q  207 gttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 254  Q
    ||||||||||||||||||| |||||||| |||||||||||||||||||    
T  17549642 gttttttattttgtgatttggtcgtcttagtgcgacgttggtttgttc 17549689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 190 - 249
Target Start/End: Complemental strand, 31147845 - 31147786
Alignment:
Q  190 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtt 249  Q
    |||||||||||| || || |||||||||||||||||||||||||| |||||| |||||||    
T  31147845 attttcacatctatttcgctttttattttgtgatttcgtcgtcttagtgcgaggttggtt 31147786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 131 - 185
Target Start/End: Original strand, 37658955 - 37659009
Alignment:
Q  131 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgttttt 185  Q
    |||||||||||||||||||||||||||| |||||||| |||||||| | ||||||    
T  37658955 gaggggtgatttagggtcaatttttgacacaaaatcacccctctaatttgttttt 37659009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 217 - 254
Target Start/End: Original strand, 9992764 - 9992801
Alignment:
Q  217 ttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 254  Q
    ||||||||||||||||||||||||||||||||||||||    
T  9992764 ttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 9992801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 190 - 246
Target Start/End: Complemental strand, 5917786 - 5917730
Alignment:
Q  190 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttg 246  Q
    |||||||||||| || |||||||| ||| |||||||||||||||| |||||||||||    
T  5917786 attttcacatctatttcgttttttctttcgtgatttcgtcgtcttagtgcgacgttg 5917730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 190 - 254
Target Start/End: Complemental strand, 7281171 - 7281107
Alignment:
Q  190 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 254  Q
    |||||||||||| ||  ||||||||||||||||||||| |||| | ||||||| |||||||||||    
T  7281171 attttcacatctattttgttttttattttgtgatttcgccgtcatagtgcgacattggtttgttc 7281107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 131 - 187
Target Start/End: Complemental strand, 36545906 - 36545850
Alignment:
Q  131 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 187  Q
    ||||| ||||||| ||||||||| |||||||| |||| |||||||||||||||||||    
T  36545906 gagggatgatttaaggtcaatttgtgacccaatatcacccctctaactcgtttttct 36545850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 187
Target Start/End: Original strand, 5989624 - 5989675
Alignment:
Q  136 gtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 187  Q
    |||||||||||||||||||| |||||||||||   |||||||||||||||||    
T  5989624 gtgatttagggtcaatttttaacccaaaatcacatctctaactcgtttttct 5989675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 131 - 185
Target Start/End: Complemental strand, 32256847 - 32256792
Alignment:
Q  131 gaggggtgatttagggtcaat-ttttgacccaaaatcatccctctaactcgttttt 185  Q
    ||||||||||||||||||||| |||| ||||||||||| |||||||||| ||||||    
T  32256847 gaggggtgatttagggtcaatttttttacccaaaatcacccctctaacttgttttt 32256792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 190 - 252
Target Start/End: Original strand, 5328037 - 5328099
Alignment:
Q  190 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgt 252  Q
    |||||||||||| ||  |||||||||||||||||||| | || ||||| ||||||||||||||    
T  5328037 attttcacatctattttgttttttattttgtgatttctttgttttcgtccgacgttggtttgt 5328099  T

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Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 79 - 164
Target Start/End: Complemental strand, 1810421 - 1810337
Alignment:
Q  79 tctcttatctcattctcaaaccctagccgtcattcctttcttcttttcatcggaggggtgatttagggtcaatttttgacccaaaa 164  Q
    ||||||||||| ||| |||||||||| |||||  | ||||||||| |  |  |||||||||||||||||||| |||||||||||||    
T  1810421 tctcttatctccttcccaaaccctagtcgtcacccttttcttcttctttttagaggggtgatttagggtcaa-ttttgacccaaaa 1810337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 79 - 154
Target Start/End: Original strand, 12329556 - 12329628
Alignment:
Q  79 tctcttatctcattctcaaaccctagccgtcattcctttcttcttttcatcggaggggtgatttagggtcaatttt 154  Q
    |||||| |||| ||||||||||||| |||||| || |||||||||||||   || ||||||||||| |||||||||    
T  12329556 tctcttctctccttctcaaaccctaaccgtcactcatttcttcttttca---gatgggtgatttagagtcaatttt 12329628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 131 - 184
Target Start/End: Original strand, 26937514 - 26937567
Alignment:
Q  131 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttt 184  Q
    ||||||| ||||||||| || ||||||| |||||||| ||||||||||||||||    
T  26937514 gaggggttatttagggttaagttttgactcaaaatcacccctctaactcgtttt 26937567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 190 - 242
Target Start/End: Original strand, 3680993 - 3681045
Alignment:
Q  190 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgac 242  Q
    |||||||||||| || |||||||||||||||||||| ||||| || |||||||    
T  3680993 attttcacatctatttcgttttttattttgtgattttgtcgttttagtgcgac 3681045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 174
Target Start/End: Complemental strand, 14115914 - 14115875
Alignment:
Q  134 gggtgatttagggtcaatttttgacccaaaatcatccctct 174  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  14115914 gggtgatttagg-tcaatttttgacccaaaatcatccctct 14115875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 187
Target Start/End: Complemental strand, 14531033 - 14530977
Alignment:
Q  131 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 187  Q
    |||||||| ||||||||||||||||||| | |||||| || ||||| ||||||||||    
T  14531033 gaggggtggtttagggtcaatttttgactccaaatcacccttctaaatcgtttttct 14530977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 190 - 254
Target Start/End: Complemental strand, 16937383 - 16937319
Alignment:
Q  190 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 254  Q
    |||| ||||||| || ||||| || |||||||||||||||||||| ||||||| ||| |||||||    
T  16937383 atttacacatctatttcgtttctttttttgtgatttcgtcgtcttagtgcgaccttgttttgttc 16937319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 175
Target Start/End: Complemental strand, 27534524 - 27534480
Alignment:
Q  131 gaggggtgatttagggtcaatttttgacccaaaatcatccctcta 175  Q
    ||||||||||||||||||||||||||| || ||||| ||||||||    
T  27534524 gaggggtgatttagggtcaatttttgatcccaaatcgtccctcta 27534480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 190 - 249
Target Start/End: Complemental strand, 37129715 - 37129659
Alignment:
Q  190 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtt 249  Q
    |||||||||||| || ||||||  ||||||||||||||||||||| ||||||||||||||    
T  37129715 attttcacatctatttcgtttt--attttgtgatttcgtcgtctt-gtgcgacgttggtt 37129659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 142
Target Start/End: Original strand, 41996511 - 41996567
Alignment:
Q  86 tctcattctcaaaccctagccgtcattcctttcttcttttcatcggaggggtgattt 142  Q
    |||| |||| ||| ||||||||||| || |||||||||||| |||||||||||||||    
T  41996511 tctccttcttaaatcctagccgtcactcatttcttcttttcgtcggaggggtgattt 41996567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 185
Target Start/End: Complemental strand, 7269585 - 7269535
Alignment:
Q  135 ggtgatttagggtcaatttttgacccaaaatcatccctctaactcgttttt 185  Q
    |||||||||| ||||||||||||||| |||||| || ||||||||| ||||    
T  7269585 ggtgatttagagtcaatttttgaccctaaatcacccttctaactcgctttt 7269535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 123
Target Start/End: Original strand, 9501503 - 9501557
Alignment:
Q  69 tttttctctttctcttatctcattctcaaaccctagccgtcattcctttcttctt 123  Q
    |||||| | ||||||| |||| ||||||||||||||||||||| | |||||||||    
T  9501503 tttttccccttctcttctctccttctcaaaccctagccgtcatccttttcttctt 9501557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 189
Target Start/End: Original strand, 13977390 - 13977448
Alignment:
Q  131 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttctat 189  Q
    ||||||||||||| |||||| |||| ||||||||| | || ||||| ||||||||||||    
T  13977390 gaggggtgatttatggtcaaatttttacccaaaattacccatctaattcgtttttctat 13977448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 187
Target Start/End: Complemental strand, 15237756 - 15237706
Alignment:
Q  137 tgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 187  Q
    ||||||||||||||||||| || | |||||| || ||||||||||||||||    
T  15237756 tgatttagggtcaatttttaactctaaatcacccatctaactcgtttttct 15237706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 189
Target Start/End: Original strand, 23766736 - 23766787
Alignment:
Q  136 gtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttctat 189  Q
    |||||||| |||||||||||||||||||||||  ||  ||||||||||||||||    
T  23766736 gtgatttaaggtcaatttttgacccaaaatca--cccataactcgtttttctat 23766787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 208 - 250
Target Start/End: Complemental strand, 26582914 - 26582872
Alignment:
Q  208 ttttttattttgtgatttcgtcgtcttcgtgcgacgttggttt 250  Q
    ||||||||||||||||||||| ||||| |||||| ||||||||    
T  26582914 ttttttattttgtgatttcgttgtcttagtgcgatgttggttt 26582872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 134 - 187
Target Start/End: Complemental strand, 11656032 - 11655979
Alignment:
Q  134 gggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 187  Q
    |||||||||||| |||||||||||||| ||||||  | || |||||||||||||    
T  11656032 gggtgatttaggatcaatttttgacccgaaatcactcttccaactcgtttttct 11655979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 209 - 254
Target Start/End: Original strand, 15827099 - 15827144
Alignment:
Q  209 tttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 254  Q
    ||||| ||| |||||||||||||||| ||||||||||| |||||||    
T  15827099 tttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgttc 15827144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 74 - 123
Target Start/End: Original strand, 31202371 - 31202420
Alignment:
Q  74 ctctttctcttatctcattctcaaaccctagccgtcattcctttcttctt 123  Q
    ||||||||||| | || ||||||||||||||||||||  |||||||||||    
T  31202371 ctctttctcttctatccttctcaaaccctagccgtcacccctttcttctt 31202420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 187
Target Start/End: Complemental strand, 284596 - 284544
Alignment:
Q  135 ggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 187  Q
    ||||||||| | ||||||||||||||||||| | | || ||||||||||||||    
T  284596 ggtgatttatgatcaatttttgacccaaaattaccgctttaactcgtttttct 284544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 187
Target Start/End: Original strand, 631281 - 631333
Alignment:
Q  135 ggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 187  Q
    ||||||||| | ||||||||||||||||||| | | || ||||||||||||||    
T  631281 ggtgatttatgatcaatttttgacccaaaattaccgctttaactcgtttttct 631333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 187
Target Start/End: Original strand, 817093 - 817145
Alignment:
Q  135 ggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 187  Q
    ||||||||| | ||||||||||||||||||| | | || ||||||||||||||    
T  817093 ggtgatttatgatcaatttttgacccaaaattaccgctttaactcgtttttct 817145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 190 - 250
Target Start/End: Original strand, 6833550 - 6833610
Alignment:
Q  190 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggttt 250  Q
    ||||| |||||| ||  ||||||||||||||||||| || ||||| |||||| ||||||||    
T  6833550 atttttacatctattttgttttttattttgtgattttgttgtcttagtgcgatgttggttt 6833610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 190 - 254
Target Start/End: Original strand, 10042842 - 10042906
Alignment:
Q  190 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 254  Q
    |||||||| ||| || |||||||| |||  ||||||||||||||| |||| |||||| |||||||    
T  10042842 attttcacttctatttcgttttttctttcatgatttcgtcgtcttagtgcaacgttgttttgttc 10042906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 206 - 254
Target Start/End: Complemental strand, 12244244 - 12244196
Alignment:
Q  206 cgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 254  Q
    |||||||| ||| ||||||||||| |||| ||||||||||| |||||||    
T  12244244 cgttttttctttcgtgatttcgtcatcttagtgcgacgttgttttgttc 12244196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 131 - 187
Target Start/End: Original strand, 14327468 - 14327524
Alignment:
Q  131 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 187  Q
    |||||||| ||||||||||||||||||||| || ||| ||||| |  ||||||||||    
T  14327468 gaggggtggtttagggtcaatttttgaccccaattcacccctccatatcgtttttct 14327524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 194 - 254
Target Start/End: Original strand, 16808951 - 16809010
Alignment:
Q  194 tcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 254  Q
    |||||||| || |||||||||||||||||||| |||||||  ||| |||||||| ||||||    
T  16808951 tcacatctatttcgttttttattttgtgattt-gtcgtctaagtgggacgttgggttgttc 16809010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 137 - 165
Target Start/End: Complemental strand, 31147919 - 31147891
Alignment:
Q  137 tgatttagggtcaatttttgacccaaaat 165  Q
    |||||||||||||||||||||||||||||    
T  31147919 tgatttagggtcaatttttgacccaaaat 31147891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 131 - 183
Target Start/End: Original strand, 32061783 - 32061835
Alignment:
Q  131 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgttt 183  Q
    |||||||  ||||||||||||||||||||| |||||| || ||||| ||||||    
T  32061783 gaggggtagtttagggtcaatttttgaccccaaatcacccttctaaatcgttt 32061835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 131 - 187
Target Start/End: Original strand, 32920641 - 32920697
Alignment:
Q  131 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 187  Q
    |||||||| |||||||||||| |||| ||| |||||| | |||||| ||||||||||    
T  32920641 gaggggtggtttagggtcaatctttgcccctaaatcaccgctctaaatcgtttttct 32920697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 114; Significance: 7e-58; HSPs: 64)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 68 - 254
Target Start/End: Complemental strand, 7640544 - 7640336
Alignment:
Q  68 ctttttctctttctcttatctcattctcaaaccctagccgtcattcctttcttcttttcatcggaggggtgatttagggtcaatttttgacccaaaatca 167  Q
    ||||||||||||||||| |||| |||||||||||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||    
T  7640544 ctttttctctttctcttctctccttctcaaaccctagccgtcactcctttcttcttttcgttggaggggtgatttagggtcaatttttgacccaaaatca 7640445  T
Q  168 tccctctaactcgtttttctat----------------------attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgtt 245  Q
     |||||||||||||||||||||                      ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7640444 cccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgtt 7640345  T
Q  246 ggtttgttc 254  Q
    |||||||||    
T  7640344 ggtttgttc 7640336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 190 - 254
Target Start/End: Complemental strand, 43929400 - 43929336
Alignment:
Q  190 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 254  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  43929400 attttcacatatgttacgttttttattttgtgatttcgtcgtcttcgtgcgacattggtttgttc 43929336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 190 - 254
Target Start/End: Original strand, 3390502 - 3390566
Alignment:
Q  190 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 254  Q
    |||||||||||| ||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  3390502 attttcacatctattttgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 3390566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 190 - 254
Target Start/End: Original strand, 5930493 - 5930557
Alignment:
Q  190 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 254  Q
    |||||||||||| || |||||||||||||||||||||||||||||||||||| ||||||||||||    
T  5930493 attttcacatctatttcgttttttattttgtgatttcgtcgtcttcgtgcgatgttggtttgttc 5930557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 190 - 254
Target Start/End: Original strand, 25771515 - 25771579
Alignment:
Q  190 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 254  Q
    |||||||||||| ||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  25771515 attttcacatctattttgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 25771579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 192 - 249
Target Start/End: Original strand, 43566946 - 43567003
Alignment:
Q  192 tttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtt 249  Q
    |||||||||| || ||||||||||||||||||||||||||||||||||||||||||||    
T  43566946 tttcacatctatttcgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtt 43567003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 192 - 249
Target Start/End: Complemental strand, 44167752 - 44167695
Alignment:
Q  192 tttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtt 249  Q
    |||||||||| || ||||||||||||||||||||||||||||||||||||||||||||    
T  44167752 tttcacatctatttcgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtt 44167695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 190 - 254
Target Start/End: Original strand, 3603055 - 3603119
Alignment:
Q  190 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 254  Q
    ||||||| |||| || ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  3603055 attttcatatctatttcgttttttattttgtgatttcatcgtcttcgtgcgacgttggtttgttc 3603119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 135 - 187
Target Start/End: Original strand, 5930416 - 5930468
Alignment:
Q  135 ggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 187  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  5930416 ggtgatttagggttaatttttgacccaaaatcatccctctaactcgtttttct 5930468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 190 - 254
Target Start/End: Complemental strand, 27024183 - 27024119
Alignment:
Q  190 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 254  Q
    |||||||||||| ||  |||||||||||||||||||||||||||||||||||| |||||||||||    
T  27024183 attttcacatctattttgttttttattttgtgatttcgtcgtcttcgtgcgacattggtttgttc 27024119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 131 - 186
Target Start/End: Original strand, 3390421 - 3390476
Alignment:
Q  131 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttc 186  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||| |||||||    
T  3390421 gaggggtgatttagggtcaatttttgacccaaaatcacccctctaacttgtttttc 3390476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 131 - 186
Target Start/End: Original strand, 25771434 - 25771489
Alignment:
Q  131 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttc 186  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||| |||||||    
T  25771434 gaggggtgatttagggtcaatttttgacccaaaatcacccctctaacttgtttttc 25771489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 131 - 189
Target Start/End: Original strand, 6089882 - 6089940
Alignment:
Q  131 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttctat 189  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||| ||||||||||||    
T  6089882 gaggggtgatttaaggtcaatttttgacccaaaatcacccctctaattcgtttttctat 6089940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 131 - 189
Target Start/End: Original strand, 25516483 - 25516541
Alignment:
Q  131 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttctat 189  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||||||| |||||||||    
T  25516483 gaggggtgatttagggtcaatatttgacccaaaatcacccctctaactcatttttctat 25516541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 131 - 189
Target Start/End: Complemental strand, 27191460 - 27191402
Alignment:
Q  131 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttctat 189  Q
    ||||| |||||||||||||||||||||||| |||||| |||||||||||||||||||||    
T  27191460 gagggatgatttagggtcaatttttgaccctaaatcacccctctaactcgtttttctat 27191402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 131 - 189
Target Start/End: Complemental strand, 27841274 - 27841216
Alignment:
Q  131 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttctat 189  Q
    ||||| |||||||||||||||||||||||| |||||| |||||||||||||||||||||    
T  27841274 gagggatgatttagggtcaatttttgaccctaaatcacccctctaactcgtttttctat 27841216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 131 - 189
Target Start/End: Original strand, 40125378 - 40125436
Alignment:
Q  131 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttctat 189  Q
    ||||||||||||||||| ||||||||||||||||||| |||||||||| ||||||||||    
T  40125378 gaggggtgatttagggttaatttttgacccaaaatcacccctctaacttgtttttctat 40125436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 131 - 189
Target Start/End: Complemental strand, 42105877 - 42105819
Alignment:
Q  131 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttctat 189  Q
    |||||||| |||||||||||||||||||||||||||| | |||||||||||||||||||    
T  42105877 gaggggtgctttagggtcaatttttgacccaaaatcaccactctaactcgtttttctat 42105819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 131 - 189
Target Start/End: Complemental strand, 44167834 - 44167776
Alignment:
Q  131 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttctat 189  Q
    |||||||||| || ||||||||||||||||||||||| |||||||||||||||||||||    
T  44167834 gaggggtgatatatggtcaatttttgacccaaaatcacccctctaactcgtttttctat 44167776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 132 - 185
Target Start/End: Original strand, 10589028 - 10589081
Alignment:
Q  132 aggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgttttt 185  Q
    |||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  10589028 aggggtgatttagggtcaatttttgacccaaaatcacccctctaacttgttttt 10589081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 192 - 249
Target Start/End: Original strand, 25516565 - 25516622
Alignment:
Q  192 tttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtt 249  Q
    |||||||||| || ||||||||||||||||||||| ||||||||||||||||||||||    
T  25516565 tttcacatctatttcgttttttattttgtgatttcttcgtcttcgtgcgacgttggtt 25516622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 192 - 249
Target Start/End: Complemental strand, 27191378 - 27191321
Alignment:
Q  192 tttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtt 249  Q
    |||||||||| || |||||||||||||||||||||||||||||||| |||||||||||    
T  27191378 tttcacatctatttcgttttttattttgtgatttcgtcgtcttcgtacgacgttggtt 27191321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 192 - 249
Target Start/End: Complemental strand, 27841192 - 27841135
Alignment:
Q  192 tttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtt 249  Q
    |||||||||| || |||||||||||||||||||||||||||||||| |||||||||||    
T  27841192 tttcacatctatttcgttttttattttgtgatttcgtcgtcttcgtacgacgttggtt 27841135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 192 - 249
Target Start/End: Original strand, 36508002 - 36508059
Alignment:
Q  192 tttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtt 249  Q
    |||||||||| ||  |||||||||||||||||||||||||||||||||||||||||||    
T  36508002 tttcacatctattttgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtt 36508059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 131 - 189
Target Start/End: Original strand, 3464948 - 3465006
Alignment:
Q  131 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttctat 189  Q
    ||||||||||||||||||||||||||| ||||||||| | | |||||||||||||||||    
T  3464948 gaggggtgatttagggtcaatttttgatccaaaatcaccacactaactcgtttttctat 3465006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 131 - 185
Target Start/End: Complemental strand, 15674099 - 15674045
Alignment:
Q  131 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgttttt 185  Q
    |||||||||||||||||||||||||||||||||||||  ||||||||| ||||||    
T  15674099 gaggggtgatttagggtcaatttttgacccaaaatcactcctctaacttgttttt 15674045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 131 - 189
Target Start/End: Original strand, 37883642 - 37883700
Alignment:
Q  131 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttctat 189  Q
    ||||||||||||||||||||||||| | ||||||||| |||||||| ||||||||||||    
T  37883642 gaggggtgatttagggtcaatttttaatccaaaatcacccctctaattcgtttttctat 37883700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 131 - 185
Target Start/End: Original strand, 41176851 - 41176905
Alignment:
Q  131 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgttttt 185  Q
    |||||||||||||||||||||||||||||||||| || || ||||||||||||||    
T  41176851 gaggggtgatttagggtcaatttttgacccaaaaccacccatctaactcgttttt 41176905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 131 - 189
Target Start/End: Original strand, 43566866 - 43566922
Alignment:
Q  131 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttctat 189  Q
    ||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||    
T  43566866 gaggggtgatt-agggtcaatttttgacccaaaatca-ccctctaactcgtttttctat 43566922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 193 - 246
Target Start/End: Original strand, 3465030 - 3465083
Alignment:
Q  193 ttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttg 246  Q
    ||||||||| || ||||||||||||||||||||||||||||| |||||||||||    
T  3465030 ttcacatctatttcgttttttattttgtgatttcgtcgtctttgtgcgacgttg 3465083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 131 - 254
Target Start/End: Complemental strand, 16880084 - 16879945
Alignment:
Q  131 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttc-----tat-----------attttcacatctgttacgtttttta 214  Q
    ||||||||||||  ||||||||||||||||||||||| |||||| |||||||||||     |||           |||||||||| | ||  ||||||||    
T  16880084 gaggggtgatttttggtcaatttttgacccaaaatcacccctctcactcgtttttcccttttattgaaataagtgattttcacatttattttgtttttta 16879985  T
Q  215 ttttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 254  Q
    | |||||||||| |||||||||||||||||||||||||||    
T  16879984 tcttgtgatttcatcgtcttcgtgcgacgttggtttgttc 16879945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 190 - 254
Target Start/End: Complemental strand, 16992142 - 16992078
Alignment:
Q  190 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 254  Q
    |||||||||| | ||  ||||||||| |||||||||| |||||||||||||||||||||||||||    
T  16992142 attttcacatttattttgttttttatcttgtgatttcatcgtcttcgtgcgacgttggtttgttc 16992078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 134 - 186
Target Start/End: Complemental strand, 27024261 - 27024209
Alignment:
Q  134 gggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttc 186  Q
    |||||||||||||||| ||||||||||||||||| |||||||||| |||||||    
T  27024261 gggtgatttagggtcattttttgacccaaaatcacccctctaacttgtttttc 27024209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 135 - 187
Target Start/End: Complemental strand, 29812736 - 29812684
Alignment:
Q  135 ggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 187  Q
    |||||||||||||||||||||||| |||||||| ||||||||||| |||||||    
T  29812736 ggtgatttagggtcaatttttgacacaaaatcacccctctaactcatttttct 29812684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 190 - 249
Target Start/End: Original strand, 38822145 - 38822202
Alignment:
Q  190 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtt 249  Q
    |||||||||||| || ||||||  ||||||||||||||||||||||||||||||||||||    
T  38822145 attttcacatctatttcgtttt--attttgtgatttcgtcgtcttcgtgcgacgttggtt 38822202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 190 - 253
Target Start/End: Complemental strand, 9715588 - 9715525
Alignment:
Q  190 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgtt 253  Q
    |||||||||||| || ||||||||||||||||||||||||||||| || | |||||| ||||||    
T  9715588 attttcacatctatttcgttttttattttgtgatttcgtcgtcttagtacaacgttgatttgtt 9715525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 134 - 185
Target Start/End: Complemental strand, 9715667 - 9715616
Alignment:
Q  134 gggtgatttagggtcaatttttgacccaaaatcatccctctaactcgttttt 185  Q
    |||||||||||||||||||||||| ||||||||||| ||| |||||||||||    
T  9715667 gggtgatttagggtcaatttttgatccaaaatcatctctccaactcgttttt 9715616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 131 - 185
Target Start/End: Complemental strand, 19581128 - 19581074
Alignment:
Q  131 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgttttt 185  Q
    |||||||||||| |||||||||||| || |||||||| |||||||||||||||||    
T  19581128 gaggggtgattttgggtcaatttttaacacaaaatcacccctctaactcgttttt 19581074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 189 - 254
Target Start/End: Complemental strand, 25237371 - 25237306
Alignment:
Q  189 tattttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 254  Q
    ||||||||||||| || |||||||| |||  ||||||||||||||| ||||||||||| |||||||    
T  25237371 tattttcacatctatttcgttttttctttcatgatttcgtcgtcttagtgcgacgttgttttgttc 25237306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 190 - 254
Target Start/End: Original strand, 41842020 - 41842082
Alignment:
Q  190 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 254  Q
    |||||||||||| || ||||| ||  ||||||||||||||||||| |||||||||||||||||||    
T  41842020 attttcacatctatttcgtttctt--tttgtgatttcgtcgtcttagtgcgacgttggtttgttc 41842082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 74 - 173
Target Start/End: Original strand, 5754207 - 5754309
Alignment:
Q  74 ctctttctcttatctcattctcaaaccctagccgtcattcctttcttctt-ttc--atcggaggggtgatttagggtcaatttttgaccc-aaaatcatc 169  Q
    |||| |||||| ||||||||||||||||||||||||||   ||||||||| |||   |  |||||||||||||||||||| ||||||||| |||||||||    
T  5754207 ctctctctcttctctcattctcaaaccctagccgtcatcattttcttcttcttctttttagaggggtgatttagggtcaa-ttttgacccaaaaatcatc 5754305  T
Q  170 cctc 173  Q
    ||||    
T  5754306 cctc 5754309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 190 - 249
Target Start/End: Original strand, 6089963 - 6090020
Alignment:
Q  190 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtt 249  Q
    |||||||||||| || ||||||  |||||||||||||||||||||||||||| |||||||    
T  6089963 attttcacatctatttcgtttt--attttgtgatttcgtcgtcttcgtgcgatgttggtt 6090020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 69 - 154
Target Start/End: Original strand, 41797535 - 41797617
Alignment:
Q  69 tttttctctttctcttatctcattctcaaaccctagccgtcattcctttcttcttttcatcggaggggtgatttagggtcaatttt 154  Q
    ||||||||  |||||| ||||||||||||||||||||||| |  ||||| ||||| |||   ||||||||||||||||| ||||||    
T  41797535 tttttctccctctcttctctcattctcaaaccctagccgttaccccttttttcttgtca---gaggggtgatttagggttaatttt 41797617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 208 - 254
Target Start/End: Original strand, 11931002 - 11931048
Alignment:
Q  208 ttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 254  Q
    ||||||||||||||||||| ||||||| ||| |||||||||||||||    
T  11931002 ttttttattttgtgatttcatcgtcttagtgtgacgttggtttgttc 11931048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 131 - 189
Target Start/End: Original strand, 26491292 - 26491350
Alignment:
Q  131 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttctat 189  Q
    ||||||| ||||| | ||||||||||||||||||||| |||| |||||| |||||||||    
T  26491292 gaggggtaatttaagttcaatttttgacccaaaatcacccctttaactcatttttctat 26491350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 135 - 189
Target Start/End: Original strand, 36507924 - 36507978
Alignment:
Q  135 ggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttctat 189  Q
    ||||| ||||||||||||||||||||||||||| | |||| |||| |||||||||    
T  36507924 ggtgacttagggtcaatttttgacccaaaatcacctctctgactcatttttctat 36507978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 192 - 253
Target Start/End: Original strand, 26491374 - 26491435
Alignment:
Q  192 tttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgtt 253  Q
    |||||||||| || | |||||| ||| |||||||||||||||| ||||||||||| ||||||    
T  26491374 tttcacatctatttcattttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtt 26491435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 131 - 187
Target Start/End: Original strand, 41841938 - 41841995
Alignment:
Q  131 gaggggtgatttagggtcaatttttgaccc-aaaatcatccctctaactcgtttttct 187  Q
    ||||| ||||||| |||||||||||||||| ||||||| |||| ||||||||||||||    
T  41841938 gagggttgatttatggtcaatttttgacccaaaaatcacccctttaactcgtttttct 41841995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 190 - 254
Target Start/End: Complemental strand, 7443610 - 7443546
Alignment:
Q  190 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 254  Q
    |||||||||||| || |||||||  ||| ||||||||| |||||| ||||||||||| |||||||    
T  7443610 attttcacatctatttcgtttttgctttcgtgatttcgccgtcttagtgcgacgttgttttgttc 7443546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 190 - 254
Target Start/End: Complemental strand, 25623089 - 25623025
Alignment:
Q  190 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 254  Q
    |||||||||||| ||  ||||||| ||| |||||||||||||||| ||||||| ||| |||||||    
T  25623089 attttcacatctattttgttttttctttcgtgatttcgtcgtcttagtgcgacattgttttgttc 25623025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 187
Target Start/End: Complemental strand, 25623170 - 25623114
Alignment:
Q  131 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 187  Q
    |||||||||||||   ||||||||||||||||||||| || | ||||||||||||||    
T  25623170 gaggggtgatttattatcaatttttgacccaaaatcacccatataactcgtttttct 25623114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 190 - 253
Target Start/End: Original strand, 40125459 - 40125522
Alignment:
Q  190 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgtt 253  Q
    |||||||||||| ||  ||||||||||||||||||| ||| |||| |||| |||||| ||||||    
T  40125459 attttcacatctattttgttttttattttgtgattttgtcatcttagtgcaacgttgttttgtt 40125522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 223 - 254
Target Start/End: Original strand, 44951522 - 44951553
Alignment:
Q  223 tttcgtcgtcttcgtgcgacgttggtttgttc 254  Q
    ||||||||||||||||||||||||||||||||    
T  44951522 tttcgtcgtcttcgtgcgacgttggtttgttc 44951553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 220 - 254
Target Start/End: Complemental strand, 16720918 - 16720884
Alignment:
Q  220 tgatttcgtcgtcttcgtgcgacgttggtttgttc 254  Q
    ||||||||||||||| |||||||||||||||||||    
T  16720918 tgatttcgtcgtctttgtgcgacgttggtttgttc 16720884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 192 - 254
Target Start/End: Complemental strand, 42105794 - 42105732
Alignment:
Q  192 tttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 254  Q
    |||||||||| ||  ||||||| |||||||||||||||||||| || | |||||| |||||||    
T  42105794 tttcacatctattttgttttttcttttgtgatttcgtcgtcttagtacaacgttgttttgttc 42105732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 224 - 253
Target Start/End: Complemental strand, 43929338 - 43929309
Alignment:
Q  224 ttcgtcgtcttcgtgcgacgttggtttgtt 253  Q
    ||||||||||||||||||||||||||||||    
T  43929338 ttcgtcgtcttcgtgcgacgttggtttgtt 43929309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 131 - 187
Target Start/End: Complemental strand, 5071495 - 5071439
Alignment:
Q  131 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 187  Q
    |||||||| |||| |||||||||||||||  |||||| || ||||| ||||||||||    
T  5071495 gaggggtggtttatggtcaatttttgaccttaaatcacccttctaaatcgtttttct 5071439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 131 - 167
Target Start/End: Complemental strand, 17037774 - 17037738
Alignment:
Q  131 gaggggtgatttagggtcaatttttgacccaaaatca 167  Q
    ||||||||||||  |||||||||||||||||||||||    
T  17037774 gaggggtgatttttggtcaatttttgacccaaaatca 17037738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 131 - 163
Target Start/End: Original strand, 19953373 - 19953405
Alignment:
Q  131 gaggggtgatttagggtcaatttttgacccaaa 163  Q
    ||||||||||||| |||||||||||||||||||    
T  19953373 gaggggtgatttatggtcaatttttgacccaaa 19953405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 190 - 246
Target Start/End: Original strand, 19953640 - 19953696
Alignment:
Q  190 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttg 246  Q
    |||||||||||| || |||||||| ||| || ||||||||||||| || ||||||||    
T  19953640 attttcacatctatttcgttttttctttcgtaatttcgtcgtcttagtacgacgttg 19953696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 86 - 154
Target Start/End: Complemental strand, 34417063 - 34416995
Alignment:
Q  86 tctcattctcaaaccctagccgtcattcctttcttcttttcatcggaggggtgatttagggtcaatttt 154  Q
    |||| ||||||||||||| |||||| |||||||| ||| |  |  ||||||||||||| ||||||||||    
T  34417063 tctccttctcaaaccctaaccgtcactcctttctacttctttttagaggggtgatttaaggtcaatttt 34416995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 131 - 167
Target Start/End: Original strand, 35353641 - 35353677
Alignment:
Q  131 gaggggtgatttagggtcaatttttgacccaaaatca 167  Q
    |||||||| ||||||||||||||||||||| ||||||    
T  35353641 gaggggtggtttagggtcaatttttgaccccaaatca 35353677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 209 - 253
Target Start/End: Original strand, 35353732 - 35353776
Alignment:
Q  209 tttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgtt 253  Q
    ||||| ||| |||||||||||||||| ||||||||||| ||||||    
T  35353732 tttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtt 35353776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 190 - 254
Target Start/End: Original strand, 37883723 - 37883787
Alignment:
Q  190 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 254  Q
    ||||| |||||| || |||||||| ||| ||| |||||| ||||| ||||||||||| |||||||    
T  37883723 attttaacatctatttcgttttttctttcgtggtttcgttgtcttagtgcgacgttgttttgttc 37883787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 98; Significance: 2e-48; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 64 - 254
Target Start/End: Original strand, 19759710 - 19759922
Alignment:
Q  64 aagcctttttctctttctcttatctcattctcaaaccctagccgtcattcctttcttcttttcatcggaggggtgatttagggtcaatttttgacccaaa 163  Q
    |||| |||||||||||||||| |||| ||||||||| || ||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  19759710 aagcatttttctctttctcttctctccttctcaaactcttgccgtcactcctttcttcttttcgtcggaggggtgatttagggtcaatttttgacccaaa 19759809  T
Q  164 atcatccctctaactcgtttttctat----------------------attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcga 241  Q
    |||| |||||||||||||||||||||                      |||||||||| ||||||||||||||||||||||||||||| |||||| ||||    
T  19759810 atcacccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatttgttacgttttttattttgtgatttcgtcatcttcgagcga 19759909  T
Q  242 cgttggtttgttc 254  Q
    |||||||||||||    
T  19759910 cgttggtttgttc 19759922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 190 - 254
Target Start/End: Complemental strand, 23843468 - 23843404
Alignment:
Q  190 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 254  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23843468 attttcacatcttttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 23843404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 190 - 254
Target Start/End: Complemental strand, 13234152 - 13234088
Alignment:
Q  190 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 254  Q
    |||||||||||| ||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  13234152 attttcacatctattttgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 13234088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 190 - 249
Target Start/End: Original strand, 16913398 - 16913457
Alignment:
Q  190 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtt 249  Q
    |||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||    
T  16913398 attttcacatctatttcgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtt 16913457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 131 - 186
Target Start/End: Original strand, 16913317 - 16913372
Alignment:
Q  131 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttc 186  Q
    |||||||||||||||||||||||||||||| |||||| ||||||||||||||||||    
T  16913317 gaggggtgatttagggtcaatttttgacccgaaatcacccctctaactcgtttttc 16913372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 131 - 189
Target Start/End: Complemental strand, 12576603 - 12576545
Alignment:
Q  131 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttctat 189  Q
    |||||||||||||||||||||||||||||| |||||| |||||||||| ||||||||||    
T  12576603 gaggggtgatttagggtcaatttttgaccctaaatcacccctctaacttgtttttctat 12576545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 190 - 254
Target Start/End: Original strand, 20845078 - 20845142
Alignment:
Q  190 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 254  Q
    |||||||||||| || |||||||||||||||||||| ||| |||||||||||| |||||||||||    
T  20845078 attttcacatctatttcgttttttattttgtgattttgtcatcttcgtgcgacattggtttgttc 20845142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 131 - 187
Target Start/End: Original strand, 32457635 - 32457691
Alignment:
Q  131 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 187  Q
    |||||||||||||| |||||||||||||||||||||| || ||||||||||||||||    
T  32457635 gaggggtgatttagcgtcaatttttgacccaaaatcacccatctaactcgtttttct 32457691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 192 - 250
Target Start/End: Original strand, 31748029 - 31748087
Alignment:
Q  192 tttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggttt 250  Q
    |||||||||| || |||||||||||||||||||||| |||||||||||||| |||||||    
T  31748029 tttcacatctatttcgttttttattttgtgatttcgacgtcttcgtgcgacattggttt 31748087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 208 - 254
Target Start/End: Original strand, 32457734 - 32457780
Alignment:
Q  208 ttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 254  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||    
T  32457734 ttttttattttgtgatttcgtcgtcttcgtgcgacgttgatttgttc 32457780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 131 - 187
Target Start/End: Complemental strand, 548990 - 548934
Alignment:
Q  131 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 187  Q
    |||| ||||| || ||||||||||||||||||||||| |||||||||||||||||||    
T  548990 gaggagtgatataaggtcaatttttgacccaaaatcacccctctaactcgtttttct 548934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 206 - 254
Target Start/End: Complemental strand, 15128181 - 15128133
Alignment:
Q  206 cgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 254  Q
    ||||||| ||||||||||||||||||||| |||||||||||||||||||    
T  15128181 cgtttttaattttgtgatttcgtcgtcttagtgcgacgttggtttgttc 15128133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 134 - 185
Target Start/End: Original strand, 32804286 - 32804337
Alignment:
Q  134 gggtgatttagggtcaatttttgacccaaaatcatccctctaactcgttttt 185  Q
    |||||||||||||||||||||||||||||||||| || |||||||| |||||    
T  32804286 gggtgatttagggtcaatttttgacccaaaatcacccatctaactcattttt 32804337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 131 - 185
Target Start/End: Complemental strand, 4663945 - 4663891
Alignment:
Q  131 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgttttt 185  Q
    |||||||||||  |||||||||||||||||||||||| ||||||||| |||||||    
T  4663945 gaggggtgattgtgggtcaatttttgacccaaaatcacccctctaacacgttttt 4663891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 145 - 187
Target Start/End: Original strand, 20845011 - 20845053
Alignment:
Q  145 ggtcaatttttgacccaaaatcatccctctaactcgtttttct 187  Q
    ||||||||||||||||||||||| |||||||||||||||||||    
T  20845011 ggtcaatttttgacccaaaatcacccctctaactcgtttttct 20845053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 209 - 254
Target Start/End: Complemental strand, 5417223 - 5417178
Alignment:
Q  209 tttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 254  Q
    |||| ||||||||||||||||||||| |||||||||||||||||||    
T  5417223 ttttcattttgtgatttcgtcgtctttgtgcgacgttggtttgttc 5417178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 189 - 254
Target Start/End: Original strand, 33194674 - 33194739
Alignment:
Q  189 tattttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 254  Q
    ||||||||||||| ||  ||||||||||||||||||||||||| || ||| || ||||||||||||    
T  33194674 tattttcacatctattttgttttttattttgtgatttcgtcgtgttagtgtgatgttggtttgttc 33194739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 131 - 187
Target Start/End: Complemental strand, 13234232 - 13234177
Alignment:
Q  131 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 187  Q
    ||||||||||||||||||||||||||||| ||||||| || ||||| ||||||||||    
T  13234232 gaggggtgatttagggtcaatttttgacctaaaatca-ccttctaattcgtttttct 13234177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 190 - 254
Target Start/End: Original strand, 32804365 - 32804429
Alignment:
Q  190 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 254  Q
    |||||||||||| ||  |||||||||||||||||||| ||||||| ||| || ||||||||||||    
T  32804365 attttcacatcttttttgttttttattttgtgatttcatcgtcttagtgagatgttggtttgttc 32804429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 210 - 249
Target Start/End: Complemental strand, 8633215 - 8633176
Alignment:
Q  210 ttttattttgtgatttcgtcgtcttcgtgcgacgttggtt 249  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  8633215 ttttattttgtgatttcgtcgttttcgtgcgacgttggtt 8633176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 134 - 185
Target Start/End: Original strand, 10744571 - 10744622
Alignment:
Q  134 gggtgatttagggtcaatttttgacccaaaatcatccctctaactcgttttt 185  Q
    ||||||||||||||||| ||||||||||||||||  ||||||||| ||||||    
T  10744571 gggtgatttagggtcaacttttgacccaaaatcactcctctaacttgttttt 10744622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 187
Target Start/End: Complemental strand, 15128260 - 15128218
Alignment:
Q  145 ggtcaatttttgacccaaaatcatccctctaactcgtttttct 187  Q
    |||||||||||| |||||||||| |||||||||||||||||||    
T  15128260 ggtcaatttttgtcccaaaatcacccctctaactcgtttttct 15128218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 135 - 254
Target Start/End: Original strand, 32574446 - 32574570
Alignment:
Q  135 ggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttctat------attttcacatctgttacgttttttattttgtgatttcgt 228  Q
    |||| ||||| |||||||||||||||||||| | |||||||||||| |||||| |      ||||| | |||| || |  |||||||||| |||||||||    
T  32574446 ggtgttttagagtcaatttttgacccaaaattaaccctctaactcgcttttctctttcccgatttttaaatctatttcactttttatttt-tgatttcgt 32574544  T
Q  229 cgtcttcgtgcgacgttggtttgttc 254  Q
    ||||||  ||||| ||||||||||||    
T  32574545 cgtcttaatgcgatgttggtttgttc 32574570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 209 - 254
Target Start/End: Complemental strand, 548891 - 548846
Alignment:
Q  209 tttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 254  Q
    |||||||||||||||||| |||||||||||| | ||||||||||||    
T  548891 tttttattttgtgatttcatcgtcttcgtgcaatgttggtttgttc 548846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 135 - 187
Target Start/End: Original strand, 891581 - 891633
Alignment:
Q  135 ggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 187  Q
    ||||||| |||||| |||||||||||||||| | |||| ||||||||||||||    
T  891581 ggtgattaagggtcgatttttgacccaaaattacccctataactcgtttttct 891633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 190 - 249
Target Start/End: Original strand, 11426014 - 11426071
Alignment:
Q  190 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtt 249  Q
    |||||||||||| || ||||||  |||||||||||||||| ||||||||||| |||||||    
T  11426014 attttcacatctatttcgtttt--attttgtgatttcgtcatcttcgtgcgatgttggtt 11426071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 190 - 242
Target Start/End: Original strand, 31804318 - 31804370
Alignment:
Q  190 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgac 242  Q
    |||||||||||| || |||||||| ||| |||||||||||||||| |||||||    
T  31804318 attttcacatctatttcgttttttctttcgtgatttcgtcgtcttagtgcgac 31804370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 135 - 187
Target Start/End: Original strand, 33194598 - 33194650
Alignment:
Q  135 ggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 187  Q
    ||||||||||||||||||||||| |||||||||   |||||| ||||||||||    
T  33194598 ggtgatttagggtcaatttttgatccaaaatcacatctctaattcgtttttct 33194650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 175
Target Start/End: Original strand, 34020607 - 34020651
Alignment:
Q  131 gaggggtgatttagggtcaatttttgacccaaaatcatccctcta 175  Q
    |||||||| ||||||||||||||||||||||| ||||||| ||||    
T  34020607 gaggggtggtttagggtcaatttttgacccaacatcatccatcta 34020651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 190 - 261
Target Start/End: Complemental strand, 4663864 - 4663793
Alignment:
Q  190 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttcttcatct 261  Q
    ||||||||| || || |||| |||  ||||||||||||||||||| ||||||||||  ||||||| ||||||    
T  4663864 attttcacaactatttcgttgttttctttgtgatttcgtcgtcttagtgcgacgttattttgttcgtcatct 4663793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 207 - 250
Target Start/End: Original strand, 7049332 - 7049375
Alignment:
Q  207 gttttttattttgtgatttcgtcgtcttcgtgcgacgttggttt 250  Q
    ||||||| ||||||||||| ||| ||||||||||||||||||||    
T  7049332 gttttttgttttgtgattttgtcatcttcgtgcgacgttggttt 7049375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 173
Target Start/End: Original strand, 7049236 - 7049278
Alignment:
Q  131 gaggggtgatttagggtcaatttttgacccaaaatcatccctc 173  Q
    |||||||||||||||||||| ||||||| |||||||| |||||    
T  7049236 gaggggtgatttagggtcaacttttgactcaaaatcacccctc 7049278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 74 - 123
Target Start/End: Original strand, 1302647 - 1302696
Alignment:
Q  74 ctctttctcttatctcattctcaaaccctagccgtcattcctttcttctt 123  Q
    |||| |||||| |||| ||||||||||||||||||||  |||||||||||    
T  1302647 ctctctctcttttctccttctcaaaccctagccgtcacccctttcttctt 1302696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 134 - 167
Target Start/End: Original strand, 8644237 - 8644270
Alignment:
Q  134 gggtgatttagggtcaatttttgacccaaaatca 167  Q
    |||||||||||||||||||||||||| |||||||    
T  8644237 gggtgatttagggtcaatttttgaccaaaaatca 8644270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 209 - 254
Target Start/End: Original strand, 10744672 - 10744717
Alignment:
Q  209 tttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 254  Q
    ||||| |||||||||||||||||||| ||||||| ||| |||||||    
T  10744672 ttttttttttgtgatttcgtcgtcttagtgcgaccttgttttgttc 10744717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 190 - 249
Target Start/End: Complemental strand, 12576522 - 12576465
Alignment:
Q  190 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtt 249  Q
    |||||||||||| || ||||||  ||||||||||| ||||||||| ||| ||||||||||    
T  12576522 attttcacatctatttcgtttt--attttgtgattccgtcgtctttgtgtgacgttggtt 12576465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0722 (Bit Score: 86; Significance: 4e-41; HSPs: 1)
Name: scaffold0722
Description:

Target: scaffold0722; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 64 - 254
Target Start/End: Complemental strand, 5718 - 5506
Alignment:
Q  64 aagcctttttctctttctcttatctcattctcaaaccctagccgtcattcctttcttcttttcatcggaggggtgatttagggtcaatttttgacccaaa 163  Q
    ||||||||||||||||||||| ||||||||||||||  ||||| ||| | |||||||||||||||||||| ||| |||||||||||||||||||| ||||    
T  5718 aagcctttttctctttctcttctctcattctcaaactttagccatcacttctttcttcttttcatcggagaggttatttagggtcaatttttgactcaaa 5619  T
Q  164 atcatccctctaactcgtttttctat----------------------attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcga 241  Q
    ||   |||| ||||||||||||||||                      |||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  5618 attgcccctttaactcgtttttctatttctcttttattgaaataagtgattttcacatctgttatgttttttattttgtgatttcgtcgtcttcgtgcga 5519  T
Q  242 cgttggtttgttc 254  Q
    |||||||||||||    
T  5518 cgttggtttgttc 5506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 86; Significance: 4e-41; HSPs: 60)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 64 - 189
Target Start/End: Original strand, 21326395 - 21326520
Alignment:
Q  64 aagcctttttctctttctcttatctcattctcaaaccctagccgtcattcctttcttcttttcatcggaggggtgatttagggtcaatttttgacccaaa 163  Q
    ||||||||||||||||||||| |||| |||||||||||||||||||| | ||||||||||||| | |||||||||||||||| ||||||||||| | |||    
T  21326395 aagcctttttctctttctcttctctctttctcaaaccctagccgtcacttctttcttcttttcgttggaggggtgatttaggatcaatttttgaacaaaa 21326494  T
Q  164 atcatccctctaactcgtttttctat 189  Q
    |||| |||||||||||||||||||||    
T  21326495 atcacccctctaactcgtttttctat 21326520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 122 - 254
Target Start/End: Complemental strand, 44562883 - 44562729
Alignment:
Q  122 ttttcatcggaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttctat----------------------attttcacat 199  Q
    ||||| ||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||                      ||||||||||    
T  44562883 ttttcgtcggatgggtgatttagggtcaatttttgacccaaaatcacccctctaactcgtttttctatttcccttttattgaaataagtgattttcacat 44562784  T
Q  200 ctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 254  Q
    |||||||||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  44562783 ctgttacgttttatattttgtgatttcgtcatcttcgtgcgacgttggtttgttc 44562729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 190 - 254
Target Start/End: Original strand, 23320510 - 23320574
Alignment:
Q  190 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 254  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  23320510 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgtgacgttggtttgttc 23320574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 79 - 189
Target Start/End: Original strand, 5832164 - 5832280
Alignment:
Q  79 tctcttatctcattctcaaaccctagccgtcattcctttcttctt------ttcatcggaggggtgatttagggtcaatttttgacccaaaatcatccct 172  Q
    |||||| |||| |||| ||||||||||||||| ||||||||||||      ||  |  |||||||||||||||||||||||||||||| |||||| ||||    
T  5832164 tctcttctctccttcttaaaccctagccgtcactcctttcttcttcttctttttgtaagaggggtgatttagggtcaatttttgaccctaaatcacccct 5832263  T
Q  173 ctaactcgtttttctat 189  Q
    |||||||||||||||||    
T  5832264 ctaactcgtttttctat 5832280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 190 - 254
Target Start/End: Complemental strand, 22344956 - 22344892
Alignment:
Q  190 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 254  Q
    |||||||||||| ||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  22344956 attttcacatctattttgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 22344892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 192 - 249
Target Start/End: Original strand, 4564589 - 4564646
Alignment:
Q  192 tttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtt 249  Q
    |||||||||| || ||||||||||||||||||||||||||||||||||||||||||||    
T  4564589 tttcacatctatttcgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtt 4564646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 190 - 254
Target Start/End: Complemental strand, 15276494 - 15276430
Alignment:
Q  190 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 254  Q
    |||||||||||| ||  ||||||||||||||||||||||||| ||||||||||||||||||||||    
T  15276494 attttcacatctattttgttttttattttgtgatttcgtcgttttcgtgcgacgttggtttgttc 15276430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 190 - 249
Target Start/End: Original strand, 1768036 - 1768095
Alignment:
Q  190 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtt 249  Q
    |||||||||||| || ||||||||||||||||||||||||||||||||| ||||||||||    
T  1768036 attttcacatctatttcgttttttattttgtgatttcgtcgtcttcgtgtgacgttggtt 1768095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 131 - 185
Target Start/End: Original strand, 52839412 - 52839466
Alignment:
Q  131 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgttttt 185  Q
    ||||||||||||||||||||||||||||||||||||| || ||||||||||||||    
T  52839412 gaggggtgatttagggtcaatttttgacccaaaatcacccttctaactcgttttt 52839466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 190 - 254
Target Start/End: Complemental strand, 630829 - 630764
Alignment:
Q  190 attttcacatctgttacgtttttt-attttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 254  Q
    |||||||||||| || |||||||| |||||||||||||||||||||| ||||||||||||||||||    
T  630829 attttcacatctatttcgtttttttattttgtgatttcgtcgtcttcttgcgacgttggtttgttc 630764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 132 - 189
Target Start/End: Complemental strand, 630909 - 630852
Alignment:
Q  132 aggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttctat 189  Q
    ||||||||||||||||||||||||||||| |||||| || ||||||||||||||||||    
T  630909 aggggtgatttagggtcaatttttgaccctaaatcacccatctaactcgtttttctat 630852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 190 - 254
Target Start/End: Original strand, 5832303 - 5832368
Alignment:
Q  190 attttcacatctgttacgtttt-ttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 254  Q
    |||||||||||| || |||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  5832303 attttcacatctatttcgtttttttattttgtgatttcgtcgtcttcttgcgacgttggtttgttc 5832368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 66 - 189
Target Start/End: Original strand, 23320376 - 23320487
Alignment:
Q  66 gcctttttctctttctcttatctcattctcaaaccctagccgtcattcctttcttcttttcatcggaggggtgatttagggtcaatttttgacccaaaat 165  Q
    ||||||||||||||||||| |||| |||||||||||||| ||||| |||||||||||||||           | || |||||  ||||||||||||||||    
T  23320376 gcctttttctctttctcttctctccttctcaaaccctagtcgtcactcctttcttcttttc-----------gtttgagggt-gatttttgacccaaaat 23320463  T
Q  166 catccctctaactcgtttttctat 189  Q
    || |||||||||||||||||||||    
T  23320464 cacccctctaactcgtttttctat 23320487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 189 - 254
Target Start/End: Complemental strand, 27469753 - 27469688
Alignment:
Q  189 tattttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 254  Q
    ||||||||||||| || |||||||| |||||||||||||||||||| ||||||||||| |||||||    
T  27469753 tattttcacatctatttcgttttttcttttgtgatttcgtcgtcttagtgcgacgttgttttgttc 27469688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 131 - 187
Target Start/End: Original strand, 17579757 - 17579813
Alignment:
Q  131 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 187  Q
    ||||||||| ||||||||||||||||| ||||||||||||||||||||| |||||||    
T  17579757 gaggggtgacttagggtcaatttttgaaccaaaatcatccctctaactcatttttct 17579813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 190 - 254
Target Start/End: Original strand, 21326543 - 21326607
Alignment:
Q  190 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 254  Q
    ||||||||||||||| |||||||||||||  |||||||||||||||||| ||| |||||||||||    
T  21326543 attttcacatctgttgcgttttttattttacgatttcgtcgtcttcgtgtgacattggtttgttc 21326607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 190 - 254
Target Start/End: Original strand, 38646654 - 38646718
Alignment:
Q  190 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 254  Q
    ||||| |||||| || | |||||||||||||||||| ||||||||||||||||||||||||||||    
T  38646654 attttaacatctatttcattttttattttgtgattttgtcgtcttcgtgcgacgttggtttgttc 38646718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 131 - 186
Target Start/End: Complemental strand, 6213011 - 6212956
Alignment:
Q  131 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttc 186  Q
    ||||||||||||| |||||||||||||||||||||||  |||||||||||||||||    
T  6213011 gaggggtgatttatggtcaatttttgacccaaaatcacacctctaactcgtttttc 6212956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 190 - 249
Target Start/End: Original strand, 15698270 - 15698329
Alignment:
Q  190 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtt 249  Q
    |||||||||||| || ||||||||||||||||||||||||||||| ||| ||||||||||    
T  15698270 attttcacatctatttcgttttttattttgtgatttcgtcgtctttgtgtgacgttggtt 15698329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 131 - 186
Target Start/End: Complemental strand, 22345037 - 22344982
Alignment:
Q  131 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttc 186  Q
    ||||||||||||||| ||||||||||||||||||||| |||||||||| |||||||    
T  22345037 gaggggtgatttaggttcaatttttgacccaaaatcacccctctaacttgtttttc 22344982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 190 - 253
Target Start/End: Complemental strand, 40488441 - 40488378
Alignment:
Q  190 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgtt 253  Q
    |||||||||||| || |||||||| |||||||||||||||||||| ||||||||||| ||||||    
T  40488441 attttcacatctatttcgttttttcttttgtgatttcgtcgtcttagtgcgacgttgttttgtt 40488378  T

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Target: chr1; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 190 - 249
Target Start/End: Original strand, 45659112 - 45659171
Alignment:
Q  190 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtt 249  Q
    |||||||||||| || | ||||||||||||||||||||||||||| ||||||||||||||    
T  45659112 attttcacatctatttcattttttattttgtgatttcgtcgtctttgtgcgacgttggtt 45659171  T

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Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 133 - 187
Target Start/End: Complemental strand, 13691881 - 13691827
Alignment:
Q  133 ggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 187  Q
    |||||| |||||||||||||||||||||||||||| |||||||| ||||||||||    
T  13691881 ggggtggtttagggtcaatttttgacccaaaatcacccctctaaatcgtttttct 13691827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 192 - 253
Target Start/End: Original strand, 36621424 - 36621485
Alignment:
Q  192 tttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgtt 253  Q
    |||||||||| || |||||||| ||||||||||| |||||||||||||| ||||||||||||    
T  36621424 tttcacatctatttcgttttttgttttgtgattttgtcgtcttcgtgcggcgttggtttgtt 36621485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 190 - 254
Target Start/End: Original strand, 23257158 - 23257222
Alignment:
Q  190 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 254  Q
    |||||||||| | ||  ||||||||| |||||||||| |||||||||||||||||||||||||||    
T  23257158 attttcacatttattttgttttttatcttgtgatttcatcgtcttcgtgcgacgttggtttgttc 23257222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 206 - 254
Target Start/End: Complemental strand, 38644825 - 38644777
Alignment:
Q  206 cgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 254  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||||||    
T  38644825 cgttttttattttgtgatttcttcgtcttcgtgcgacattggtttgttc 38644777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 190 - 246
Target Start/End: Original strand, 40992406 - 40992462
Alignment:
Q  190 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttg 246  Q
    |||||||||| | || |||||||||||||||||||||||| ||||||||||||||||    
T  40992406 attttcacatttatttcgttttttattttgtgatttcgtcatcttcgtgcgacgttg 40992462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 192 - 254
Target Start/End: Original strand, 28213120 - 28213182
Alignment:
Q  192 tttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 254  Q
    |||||||||| || |||||||||||||||||||| |||||||| ||||| |||| ||||||||    
T  28213120 tttcacatctatttcgttttttattttgtgattttgtcgtctttgtgcggcgttagtttgttc 28213182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 131 - 185
Target Start/End: Complemental strand, 44514115 - 44514061
Alignment:
Q  131 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgttttt 185  Q
    ||||||||||||||||||||||||||||||||||||| | || ||||| ||||||    
T  44514115 gaggggtgatttagggtcaatttttgacccaaaatcacctctttaacttgttttt 44514061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 208 - 254
Target Start/End: Original strand, 49651932 - 49651978
Alignment:
Q  208 ttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 254  Q
    ||||||||||||||||||||||||||||||| |||||| ||||||||    
T  49651932 ttttttattttgtgatttcgtcgtcttcgtgtgacgttcgtttgttc 49651978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 131 - 185
Target Start/End: Original strand, 52839510 - 52839564
Alignment:
Q  131 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgttttt 185  Q
    ||||||||||||| | ||||||||||||||||||||| || ||||||||||||||    
T  52839510 gaggggtgatttatgatcaatttttgacccaaaatcacccttctaactcgttttt 52839564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 190 - 239
Target Start/End: Original strand, 900192 - 900241
Alignment:
Q  190 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgc 239  Q
    |||||||||||| || ||||||||||||||||||||||||||||| ||||    
T  900192 attttcacatctatttcgttttttattttgtgatttcgtcgtctttgtgc 900241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 193 - 254
Target Start/End: Original strand, 52752096 - 52752157
Alignment:
Q  193 ttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 254  Q
    ||||||||| ||  ||||||||||||||||||| ||||||||||| |||| |||||||||||    
T  52752096 ttcacatctattttgttttttattttgtgattttgtcgtcttcgtacgacattggtttgttc 52752157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 131 - 187
Target Start/End: Complemental strand, 14717367 - 14717312
Alignment:
Q  131 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 187  Q
    ||||||||||||||||||||||||||||  ||| ||| |||||||||||||||||||    
T  14717367 gaggggtgatttagggtcaatttttgacttaaattca-ccctctaactcgtttttct 14717312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 190 - 254
Target Start/End: Complemental strand, 32539234 - 32539170
Alignment:
Q  190 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 254  Q
    |||||| ||||| ||  ||||||||||||||||||| |||||||| || ||||||||||||||||    
T  32539234 attttcgcatctattttgttttttattttgtgattttgtcgtcttagtacgacgttggtttgttc 32539170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 131 - 187
Target Start/End: Original strand, 38646573 - 38646629
Alignment:
Q  131 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 187  Q
    |||| |||||||| ||||||||||||||||||||||| || | ||||||||||||||    
T  38646573 gaggagtgatttatggtcaatttttgacccaaaatcacccatgtaactcgtttttct 38646629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 190 - 261
Target Start/End: Original strand, 52839600 - 52839671
Alignment:
Q  190 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttcttcatct 261  Q
    |||||||||| | || |||||||| ||| ||||||| |||||||| ||||||||||| ||||||| ||||||    
T  52839600 attttcacatttatttcgttttttctttcgtgattttgtcgtcttagtgcgacgttgttttgttcgtcatct 52839671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 190 - 252
Target Start/End: Complemental strand, 35077934 - 35077872
Alignment:
Q  190 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgt 252  Q
    |||||||||||| || |||||||| ||| |||||||||||||||| || |||||||| |||||    
T  35077934 attttcacatctatttcgttttttctttcgtgatttcgtcgtcttagtacgacgttgttttgt 35077872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 141 - 187
Target Start/End: Original strand, 45659041 - 45659087
Alignment:
Q  141 ttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 187  Q
    |||||||||||||||||||||||||||   |||||||||||||||||    
T  45659041 ttagggtcaatttttgacccaaaatcactgctctaactcgtttttct 45659087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 209 - 254
Target Start/End: Complemental strand, 12967757 - 12967712
Alignment:
Q  209 tttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 254  Q
    |||||||||||||||| |||| || |||||||||||||||||||||    
T  12967757 tttttattttgtgattccgtcatcatcgtgcgacgttggtttgttc 12967712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 190 - 246
Target Start/End: Complemental strand, 14717287 - 14717230
Alignment:
Q  190 attttcacatctgttacgttttttatttt-gtgatttcgtcgtcttcgtgcgacgttg 246  Q
    |||||||||||| ||  |||||||||||| |||||||||||||||| |||||||||||    
T  14717287 attttcacatctattttgttttttatttttgtgatttcgtcgtctttgtgcgacgttg 14717230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 131 - 184
Target Start/End: Original strand, 46589165 - 46589217
Alignment:
Q  131 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttt 184  Q
    ||||||||||||| | |||||||||||| |||||||| ||||||||||||||||    
T  46589165 gaggggtgatttatgatcaatttttgactcaaaatca-ccctctaactcgtttt 46589217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 187
Target Start/End: Original strand, 8893294 - 8893338
Alignment:
Q  143 agggtcaatttttgacccaaaatcatccctctaactcgtttttct 187  Q
    ||||| ||||||||||||||||||| || ||||||||||||||||    
T  8893294 agggttaatttttgacccaaaatcacccttctaactcgtttttct 8893338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 190 - 254
Target Start/End: Original strand, 10877416 - 10877480
Alignment:
Q  190 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 254  Q
    ||||||| |||| || |||||||| ||| ||||||||||| |||| ||||||||||| |||||||    
T  10877416 attttcatatctatttcgttttttctttcgtgatttcgtcatcttagtgcgacgttgttttgttc 10877480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 154
Target Start/End: Complemental strand, 15791675 - 15791607
Alignment:
Q  86 tctcattctcaaaccctagccgtcattcctttcttcttttcatcggaggggtgatttagggtcaatttt 154  Q
    |||| |||||||||||||| ||||||  |||||||||| |  |||||||| ||||||||| ||||||||    
T  15791675 tctccttctcaaaccctagtcgtcatctctttcttcttcttgtcggagggctgatttaggatcaatttt 15791607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 79 - 123
Target Start/End: Original strand, 51417928 - 51417972
Alignment:
Q  79 tctcttatctcattctcaaaccctagccgtcattcctttcttctt 123  Q
    ||||||||||| ||||||||||||| ||||||| |||||||||||    
T  51417928 tctcttatctccttctcaaaccctaaccgtcatccctttcttctt 51417972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 130 - 185
Target Start/End: Complemental strand, 33177722 - 33177667
Alignment:
Q  130 ggaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgttttt 185  Q
    |||||||||||||| ||  |||||||||| ||||||||||| |||||||| |||||    
T  33177722 ggaggggtgatttatggctaatttttgactcaaaatcatccatctaactccttttt 33177667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 132 - 167
Target Start/End: Complemental strand, 48655190 - 48655155
Alignment:
Q  132 aggggtgatttagggtcaatttttgacccaaaatca 167  Q
    ||||||||||||| ||||||||||||||||||||||    
T  48655190 aggggtgatttagagtcaatttttgacccaaaatca 48655155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 189
Target Start/End: Complemental strand, 12148169 - 12148115
Alignment:
Q  135 ggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttctat 189  Q
    |||||||||| |||| ||||||||||||||  | | |||||||||||||||||||    
T  12148169 ggtgatttagcgtcagtttttgacccaaaaataccactctaactcgtttttctat 12148115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 176
Target Start/End: Complemental strand, 22032215 - 22032169
Alignment:
Q  131 gaggggtgatttagggtcaatttttgaccc-aaaatcatccctctaa 176  Q
    ||||| |||||||||||||||||||||||| ||||||| ||||||||    
T  22032215 gagggatgatttagggtcaatttttgacccaaaaatcacccctctaa 22032169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 187
Target Start/End: Complemental strand, 35078009 - 35077959
Alignment:
Q  137 tgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 187  Q
    ||||||| | |||| |||||||||||||||| | |||||||||||||||||    
T  35078009 tgatttatgatcaaattttgacccaaaatcacctctctaactcgtttttct 35077959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 184
Target Start/End: Complemental strand, 37685206 - 37685168
Alignment:
Q  146 gtcaatttttgacccaaaatcatccctctaactcgtttt 184  Q
    ||||||||||||||||||||||  |||||||||||||||    
T  37685206 gtcaatttttgacccaaaatcaatcctctaactcgtttt 37685168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 184
Target Start/End: Original strand, 37700312 - 37700350
Alignment:
Q  146 gtcaatttttgacccaaaatcatccctctaactcgtttt 184  Q
    ||||||||||||||||||||||  |||||||||||||||    
T  37700312 gtcaatttttgacccaaaatcaatcctctaactcgtttt 37700350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 134 - 171
Target Start/End: Original strand, 8937612 - 8937648
Alignment:
Q  134 gggtgatttagggtcaatttttgacccaaaatcatccc 171  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  8937612 gggtgatttagggtcaa-ttttgacccaaaatcatccc 8937648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 135 - 187
Target Start/End: Original strand, 10877338 - 10877391
Alignment:
Q  135 ggtgatttagggtcaatttttg-acccaaaatcatccctctaactcgtttttct 187  Q
    ||||||||| |||||||||||  |||||||||||  ||||||||||||||||||    
T  10877338 ggtgatttatggtcaatttttttacccaaaatcacacctctaactcgtttttct 10877391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 74 - 123
Target Start/End: Complemental strand, 28678344 - 28678295
Alignment:
Q  74 ctctttctcttatctcattctcaaaccctagccgtcattcctttcttctt 123  Q
    |||| |||||| |||| ||||||||||||||||||||  |||||||||||    
T  28678344 ctctctctcttctctccttctcaaaccctagccgtcacccctttcttctt 28678295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 91 - 164
Target Start/End: Original strand, 32784047 - 32784119
Alignment:
Q  91 ttctcaaaccctagccgtcattcctttcttcttttcatcggaggggtgatttagggtcaatttttgacccaaaa 164  Q
    ||||||||||| ||| ||||  ||||||||||| |  ||  ||||||||||||||||||| |||||||||||||    
T  32784047 ttctcaaaccccagctgtcacccctttcttcttcttttcaaaggggtgatttagggtcaa-ttttgacccaaaa 32784119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 190 - 242
Target Start/End: Complemental strand, 6212930 - 6212878
Alignment:
Q  190 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgac 242  Q
    |||||||||||| |   ||||||||||||| |||||||||||||| |||||||    
T  6212930 attttcacatctatcttgttttttattttgggatttcgtcgtctttgtgcgac 6212878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 79 - 123
Target Start/End: Complemental strand, 37825518 - 37825474
Alignment:
Q  79 tctcttatctcattctcaaaccctagccgtcattcctttcttctt 123  Q
    |||||| |||| |||||||||||||||||||| || |||||||||    
T  37825518 tctcttctctccttctcaaaccctagccgtcactcttttcttctt 37825474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 93 - 173
Target Start/End: Original strand, 42276298 - 42276377
Alignment:
Q  93 ctcaaaccctagccgtcattcctttcttcttttcatcggaggggtgatttagggtcaatttttgacccaaaatcatccctc 173  Q
    |||||||||||| |||||  | ||||||||| |  || |||||||||||||||||  ||||||||| |||||||| |||||    
T  42276298 ctcaaaccctagtcgtcacccttttcttcttcttttcagaggggtgatttagggt-tatttttgacacaaaatcacccctc 42276377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 78; Significance: 2e-36; HSPs: 67)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 91 - 261
Target Start/End: Complemental strand, 43807315 - 43807123
Alignment:
Q  91 ttctcaaaccctagccgtcattcctttcttcttttcatcggaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttctat- 189  Q
    |||||||||||||||| ||| || |||||||||||| |||||| ||||||||| ||||||||||||||||||||||| | |||||||||||||||||||     
T  43807315 ttctcaaaccctagccatcactcttttcttcttttcgtcggagaggtgatttatggtcaatttttgacccaaaatcacctctctaactcgtttttctatt 43807216  T
Q  190 ---------------------attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttcttcatct 261  Q
                         ||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||| ||||||    
T  43807215 tctcttttattaaaataagcaattttcacatctgttacgtattttattttgtgatttcgtcgtcttcgtgcgatgttggtttgttcgtcatct 43807123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 73 - 254
Target Start/End: Complemental strand, 30993008 - 30992803
Alignment:
Q  73 tctctttctcttatctcattctc--aaaccctagccgtcattcctttcttcttttcatcggaggggtgatttagggtcaatttttgacccaaaatcatcc 170  Q
    |||||||||||| |||| |||||  |||||||| | |||| | ||||||||||||| |||||||||||||||| ||| ||||||||||||||||||| ||    
T  30993008 tctctttctcttctctccttctctcaaaccctacctgtcacttctttcttcttttcgtcggaggggtgatttaaggttaatttttgacccaaaatcaccc 30992909  T
Q  171 ctctaactcgtttttctat----------------------attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggt 248  Q
    |||||||| ||||||||||                      |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |    
T  30992908 ctctaacttgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgattttgtcgtcttcgtgcgacgttgat 30992809  T
Q  249 ttgttc 254  Q
    ||||||    
T  30992808 ttgttc 30992803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 190 - 254
Target Start/End: Complemental strand, 26017702 - 26017638
Alignment:
Q  190 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 254  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  26017702 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgatgttggtttgttc 26017638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 190 - 261
Target Start/End: Complemental strand, 23732437 - 23732366
Alignment:
Q  190 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttcttcatct 261  Q
    |||||||||||| ||  |||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  23732437 attttcacatctattttgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttcgtcatct 23732366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 190 - 254
Target Start/End: Original strand, 40775337 - 40775401
Alignment:
Q  190 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 254  Q
    |||||||||||| ||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  40775337 attttcacatctattttgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 40775401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 190 - 254
Target Start/End: Original strand, 47749804 - 47749868
Alignment:
Q  190 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 254  Q
    |||||||||||| || ||||||||||||||||||||||| |||||||||||||||||||||||||    
T  47749804 attttcacatctatttcgttttttattttgtgatttcgttgtcttcgtgcgacgttggtttgttc 47749868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 131 - 189
Target Start/End: Original strand, 24470384 - 24470442
Alignment:
Q  131 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttctat 189  Q
    |||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||    
T  24470384 gaggggtgatttaggggcaatttttgacccaaaatcacccctctaactcgtttttctat 24470442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 131 - 189
Target Start/End: Original strand, 24475332 - 24475390
Alignment:
Q  131 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttctat 189  Q
    |||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||    
T  24475332 gaggggtgatttaggggcaatttttgacccaaaatcacccctctaactcgtttttctat 24475390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 134 - 187
Target Start/End: Complemental strand, 25855342 - 25855289
Alignment:
Q  134 gggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 187  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  25855342 gggtgatttagggtcaatttttgatccaaaatcatccctctaactcgtttttct 25855289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 190 - 254
Target Start/End: Complemental strand, 135189 - 135125
Alignment:
Q  190 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 254  Q
    |||||||||||| || | |||| ||||||||||||||||||||||||||||||||||||||||||    
T  135189 attttcacatctatttcattttgtattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 135125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 190 - 254
Target Start/End: Complemental strand, 25855264 - 25855200
Alignment:
Q  190 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 254  Q
    ||||||| |||| || |||||||||||||||||||| ||||||||||||||||||||||||||||    
T  25855264 attttcatatctatttcgttttttattttgtgattttgtcgtcttcgtgcgacgttggtttgttc 25855200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 192 - 249
Target Start/End: Complemental strand, 8611665 - 8611608
Alignment:
Q  192 tttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtt 249  Q
    |||||||||| ||  |||||||||||||||||||||||||||||||||||||||||||    
T  8611665 tttcacatctattttgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtt 8611608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 192 - 249
Target Start/End: Original strand, 49166998 - 49167055
Alignment:
Q  192 tttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtt 249  Q
    |||||||||| || |||||||||||| |||||||||||||||||||||||||||||||    
T  49166998 tttcacatctatttcgttttttatttcgtgatttcgtcgtcttcgtgcgacgttggtt 49167055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 190 - 254
Target Start/End: Complemental strand, 13008717 - 13008653
Alignment:
Q  190 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 254  Q
    |||||||||||| ||  ||||||||||||||||||| |||||||| |||||||||||||||||||    
T  13008717 attttcacatctattttgttttttattttgtgattttgtcgtcttagtgcgacgttggtttgttc 13008653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 131 - 187
Target Start/End: Original strand, 47749723 - 47749779
Alignment:
Q  131 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 187  Q
    ||||||||||||| ||||||||||||||||||||||| ||||||| |||||||||||    
T  47749723 gaggggtgatttatggtcaatttttgacccaaaatcacccctctatctcgtttttct 47749779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 131 - 186
Target Start/End: Original strand, 40775256 - 40775311
Alignment:
Q  131 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttc 186  Q
    ||||||||||||||||||||||||||| ||||||||| |||| |||||||||||||    
T  40775256 gaggggtgatttagggtcaatttttgatccaaaatcacccctataactcgtttttc 40775311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 191 - 254
Target Start/End: Original strand, 42490774 - 42490837
Alignment:
Q  191 ttttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 254  Q
    ||||||||||| || |||| |||||||||||||||| ||||||||||| |||||||||||||||    
T  42490774 ttttcacatctatttcgttctttattttgtgatttcatcgtcttcgtgtgacgttggtttgttc 42490837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 134 - 189
Target Start/End: Original strand, 49166919 - 49166974
Alignment:
Q  134 gggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttctat 189  Q
    |||||||||||||||||||||||||| ||||||| |||||||||| ||||||||||    
T  49166919 gggtgatttagggtcaatttttgacctaaaatcacccctctaacttgtttttctat 49166974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 133 - 187
Target Start/End: Original strand, 7985883 - 7985937
Alignment:
Q  133 ggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 187  Q
    |||||||||||||||||| |||||||| |||| ||||||||||||||||||||||    
T  7985883 ggggtgatttagggtcaacttttgacctaaaaccatccctctaactcgtttttct 7985937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 131 - 189
Target Start/End: Complemental strand, 8611747 - 8611689
Alignment:
Q  131 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttctat 189  Q
    ||||||||||||||||||  |||||||||||| |||| |||||||||||||||||||||    
T  8611747 gaggggtgatttagggtctctttttgacccaatatcacccctctaactcgtttttctat 8611689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 131 - 185
Target Start/End: Original strand, 28015345 - 28015399
Alignment:
Q  131 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgttttt 185  Q
    ||||||||||||||||||||||||||| ||||||||| |||||||||| ||||||    
T  28015345 gaggggtgatttagggtcaatttttgatccaaaatcacccctctaacttgttttt 28015399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 208 - 250
Target Start/End: Original strand, 35661612 - 35661654
Alignment:
Q  208 ttttttattttgtgatttcgtcgtcttcgtgcgacgttggttt 250  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  35661612 ttttttattttgtgatttcgtcgtcttcgtgcgacgttggttt 35661654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 192 - 249
Target Start/End: Original strand, 24475414 - 24475471
Alignment:
Q  192 tttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtt 249  Q
    |||||||||| || |||||||||||||||||||||||||||  |||||||||||||||    
T  24475414 tttcacatctatttcgttttttattttgtgatttcgtcgtccacgtgcgacgttggtt 24475471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 192 - 249
Target Start/End: Original strand, 40476780 - 40476837
Alignment:
Q  192 tttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtt 249  Q
    |||||||||| || |||||||||||||||||||||||||||||||| | |||||||||    
T  40476780 tttcacatctatttcgttttttattttgtgatttcgtcgtcttcgtacaacgttggtt 40476837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 134 - 183
Target Start/End: Original strand, 47156388 - 47156437
Alignment:
Q  134 gggtgatttagggtcaatttttgacccaaaatcatccctctaactcgttt 183  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  47156388 gggtgatttaaggtcaatttttgatccaaaatcatccctctaactcgttt 47156437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 190 - 254
Target Start/End: Original strand, 7985962 - 7986026
Alignment:
Q  190 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 254  Q
    |||||||||||| || | |||| ||||||||||||||||| |||||||| |||||||||||||||    
T  7985962 attttcacatctatttcattttgtattttgtgatttcgtcatcttcgtgtgacgttggtttgttc 7986026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 190 - 254
Target Start/End: Original strand, 8319385 - 8319449
Alignment:
Q  190 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 254  Q
    |||||||||| | ||  ||||||||||||||||||| ||||||||||| ||||||||||||||||    
T  8319385 attttcacatatatttagttttttattttgtgattttgtcgtcttcgtacgacgttggtttgttc 8319449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 131 - 187
Target Start/End: Complemental strand, 29804801 - 29804745
Alignment:
Q  131 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 187  Q
    |||||||| ||||||||||||||||||||| |||||| |||||||| ||||||||||    
T  29804801 gaggggtggtttagggtcaatttttgaccccaaatcacccctctaaatcgtttttct 29804745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 131 - 185
Target Start/End: Original strand, 43483583 - 43483637
Alignment:
Q  131 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgttttt 185  Q
    |||| |||||||||||||||||||||| | |||||||||||||||||| ||||||    
T  43483583 gaggagtgatttagggtcaatttttgatctaaaatcatccctctaacttgttttt 43483637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 192 - 249
Target Start/End: Original strand, 24470466 - 24470523
Alignment:
Q  192 tttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtt 249  Q
    |||||||||| || ||||||||||||||||||||| |||||  |||||||||||||||    
T  24470466 tttcacatctatttcgttttttattttgtgatttcatcgtcaacgtgcgacgttggtt 24470523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 134 - 187
Target Start/End: Original strand, 44681454 - 44681506
Alignment:
Q  134 gggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 187  Q
    |||||||||||| ||||||||||||| ||||||| |||||||||||||||||||    
T  44681454 gggtgatttaggttcaatttttgacctaaaatca-ccctctaactcgtttttct 44681506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 190 - 254
Target Start/End: Original strand, 9933917 - 9933981
Alignment:
Q  190 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 254  Q
    ||||| |||||| || |||||||| ||||||||||||| |||||| ||||||||||| |||||||    
T  9933917 atttttacatctatttcgttttttcttttgtgatttcgccgtcttagtgcgacgttgttttgttc 9933981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 74 - 154
Target Start/End: Original strand, 21990583 - 21990663
Alignment:
Q  74 ctctttctcttatctcattctcaaaccctagccgtcattcctttcttcttttcatcggaggggtgatttagggtcaatttt 154  Q
    |||| |||||| |||| ||||||||||||||||||||  |||||||  || |  || ||||||||||||||||||||||||    
T  21990583 ctctctctcttctctccttctcaaaccctagccgtcacccctttctctttcttttcagaggggtgatttagggtcaatttt 21990663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 131 - 187
Target Start/End: Complemental strand, 23732518 - 23732462
Alignment:
Q  131 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 187  Q
    ||||||||||||| |||||||||||||| ||||||||   |||||||||||||||||    
T  23732518 gaggggtgatttaaggtcaatttttgactcaaaatcacttctctaactcgtttttct 23732462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 190 - 250
Target Start/End: Complemental strand, 35141795 - 35141735
Alignment:
Q  190 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggttt 250  Q
    |||||||||||| || | ||||||||||||||||| ||||||||| |||||||||| ||||    
T  35141795 attttcacatctatttcattttttattttgtgattccgtcgtcttagtgcgacgttagttt 35141735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 132 - 176
Target Start/End: Complemental strand, 38649482 - 38649438
Alignment:
Q  132 aggggtgatttagggtcaatttttgacccaaaatcatccctctaa 176  Q
    ||||||||||||| |||||||||||||||||||||| ||||||||    
T  38649482 aggggtgatttagagtcaatttttgacccaaaatcacccctctaa 38649438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 190 - 254
Target Start/End: Original strand, 43483670 - 43483734
Alignment:
Q  190 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 254  Q
    |||||||||||| || |||||||  ||||||||||||| |||||| ||||||||||| |||||||    
T  43483670 attttcacatctatttcgtttttgcttttgtgatttcgccgtcttagtgcgacgttgttttgttc 43483734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 190 - 249
Target Start/End: Original strand, 47156464 - 47156521
Alignment:
Q  190 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtt 249  Q
    |||||||||||| || ||||||  ||||||||||||||||||||||||| ||||||||||    
T  47156464 attttcacatctatttcgtttt--attttgtgatttcgtcgtcttcgtgtgacgttggtt 47156521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 210 - 249
Target Start/End: Original strand, 11001934 - 11001973
Alignment:
Q  210 ttttattttgtgatttcgtcgtcttcgtgcgacgttggtt 249  Q
    ||||||||||||||||||||||||||||| ||||||||||    
T  11001934 ttttattttgtgatttcgtcgtcttcgtgagacgttggtt 11001973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 131 - 186
Target Start/End: Original strand, 16263376 - 16263431
Alignment:
Q  131 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttc 186  Q
    ||||||||||||||| ||||||||||| ||||||||| | |||||||| |||||||    
T  16263376 gaggggtgatttaggatcaatttttgatccaaaatcacctctctaacttgtttttc 16263431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 134 - 185
Target Start/End: Complemental strand, 35141875 - 35141824
Alignment:
Q  134 gggtgatttagggtcaatttttgacccaaaatcatccctctaactcgttttt 185  Q
    |||||||||||||||||||||||||| ||||||| || |||||||| |||||    
T  35141875 gggtgatttagggtcaatttttgaccaaaaatcacccttctaactcattttt 35141824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 79 - 164
Target Start/End: Original strand, 40761519 - 40761600
Alignment:
Q  79 tctcttatctcattctcaaaccctagccgtcattcctttcttcttttcatcggaggggtgatttagggtcaatttttgacccaaaa 164  Q
    |||||| |||| ||| |||||||||||||||   |||||||||||||||   ||||| |||||||||||||| |||||||||||||    
T  40761519 tctcttctctccttcccaaaccctagccgtcgcccctttcttcttttca---gagggatgatttagggtcaa-ttttgacccaaaa 40761600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 190 - 253
Target Start/End: Original strand, 46918470 - 46918533
Alignment:
Q  190 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgtt 253  Q
    |||||||||||| ||  ||||||||||||||||||||||| |||| |||| || ||||||||||    
T  46918470 attttcacatctattttgttttttattttgtgatttcgtcatctttgtgcaacattggtttgtt 46918533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 80 - 154
Target Start/End: Complemental strand, 28665105 - 28665031
Alignment:
Q  80 ctcttatctcattctcaaaccctagccgtcattcctttcttcttttcatcggaggggtgatttagggtcaatttt 154  Q
    ||||| |||||||||||||||||  ||||||  ||||||||||| |  || || |||||||||||||||||||||    
T  28665105 ctcttctctcattctcaaaccctgaccgtcacccctttcttcttcttgtcagatgggtgatttagggtcaatttt 28665031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 131 - 184
Target Start/End: Complemental strand, 21329420 - 21329368
Alignment:
Q  131 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttt 184  Q
    |||||||| ||||||||||||||||||||| |||||| |||||||| |||||||    
T  21329420 gaggggtggtttagggtcaatttttgaccc-aaatcacccctctaaatcgtttt 21329368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 131 - 187
Target Start/End: Complemental strand, 33530591 - 33530537
Alignment:
Q  131 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 187  Q
    |||||||||||||||||||||||  ||||||||| || ||||||||| |||||||||    
T  33530591 gaggggtgatttagggtcaattt--gacccaaaaccacccctctaacccgtttttct 33530537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 186
Target Start/End: Complemental strand, 14734172 - 14734120
Alignment:
Q  134 gggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttc 186  Q
    ||||| ||||||||||||||||||||| |||||| ||||||||  ||||||||    
T  14734172 gggtggtttagggtcaatttttgaccccaaatcacccctctaaaacgtttttc 14734120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 135 - 187
Target Start/End: Complemental strand, 24045353 - 24045301
Alignment:
Q  135 ggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 187  Q
    ||||||||| ||||||||||||||||||||||| || |||||| | |||||||    
T  24045353 ggtgatttaaggtcaatttttgacccaaaatcacccgtctaacacatttttct 24045301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 190 - 246
Target Start/End: Original strand, 37399696 - 37399752
Alignment:
Q  190 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttg 246  Q
    |||||||||||| ||   |||||||||||| |||||||||||||| |||||||||||    
T  37399696 attttcacatctattttattttttattttgagatttcgtcgtctttgtgcgacgttg 37399752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 190 - 246
Target Start/End: Original strand, 39090186 - 39090242
Alignment:
Q  190 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttg 246  Q
    |||||||||||| || | |||||| ||||||||||||||| |||| |||||||||||    
T  39090186 attttcacatctatttcattttttcttttgtgatttcgtcatctttgtgcgacgttg 39090242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 190 - 257
Target Start/End: Complemental strand, 15124024 - 15123957
Alignment:
Q  190 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttcttc 257  Q
    |||||||||||| ||  |||||||||||||||||||| ||||| | ||   |||||||||||||||||    
T  15124024 attttcacatctattttgttttttattttgtgatttcatcgtcatagtataacgttggtttgttcttc 15123957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 185
Target Start/End: Original strand, 8319303 - 8319357
Alignment:
Q  131 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgttttt 185  Q
    |||| |||||||| |||||| |||||||||||||||| || | ||||||||||||    
T  8319303 gaggagtgatttatggtcaacttttgacccaaaatcacccatgtaactcgttttt 8319357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 188
Target Start/End: Complemental strand, 10250603 - 10250549
Alignment:
Q  134 gggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttcta 188  Q
    |||||||  |||||||||||| || ||||||||| |||||||| |||||||||||    
T  10250603 gggtgataaagggtcaattttcgatccaaaatcacccctctaattcgtttttcta 10250549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 215 - 253
Target Start/End: Complemental strand, 14734068 - 14734030
Alignment:
Q  215 ttttgtgatttcgtcgtcttcgtgcgacgttggtttgtt 253  Q
    |||||||||||||||||||| ||||||||||| ||||||    
T  14734068 ttttgtgatttcgtcgtcttagtgcgacgttgttttgtt 14734030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 187
Target Start/End: Original strand, 42490713 - 42490747
Alignment:
Q  153 tttgacccaaaatcatccctctaactcgtttttct 187  Q
    ||||||||||||||| |||||||||||||||||||    
T  42490713 tttgacccaaaatcacccctctaactcgtttttct 42490747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 219 - 261
Target Start/End: Original strand, 43098676 - 43098718
Alignment:
Q  219 gtgatttcgtcgtcttcgtgcgacgttggtttgttcttcatct 261  Q
    |||||||||||||||| ||||| ||||| ||||||||||||||    
T  43098676 gtgatttcgtcgtcttagtgcggcgttgttttgttcttcatct 43098718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 207 - 252
Target Start/End: Original strand, 772530 - 772575
Alignment:
Q  207 gttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgt 252  Q
    ||||||| ||| |||||||||||||||| ||||||||||| |||||    
T  772530 gttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgt 772575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 208 - 253
Target Start/End: Original strand, 14707671 - 14707716
Alignment:
Q  208 ttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgtt 253  Q
    |||||||||||||||||||||| |||| ||| | ||||||||||||    
T  14707671 ttttttattttgtgatttcgtcatcttagtgtggcgttggtttgtt 14707716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 190 - 255
Target Start/End: Complemental strand, 35135227 - 35135162
Alignment:
Q  190 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttct 255  Q
    |||||||||||| || |||||||||| |||||||||  |||  || ||| ||||||||||||||||    
T  35135227 attttcacatctatttcgttttttatattgtgattttatcggattagtgtgacgttggtttgttct 35135162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 206 - 254
Target Start/End: Complemental strand, 5025084 - 5025036
Alignment:
Q  206 cgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 254  Q
    ||||| || |||||||||||||||||||| ||||||| ||| |||||||    
T  5025084 cgtttctttttttgtgatttcgtcgtcttagtgcgaccttgttttgttc 5025036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 131 - 178
Target Start/End: Complemental strand, 5025182 - 5025134
Alignment:
Q  131 gaggggtgatttagggtcaattttt-gacccaaaatcatccctctaact 178  Q
    |||||||||||| | |||||||||| |||||||||||| ||||||||||    
T  5025182 gaggggtgattttgagtcaattttttgacccaaaatcacccctctaact 5025134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 79 - 123
Target Start/End: Original strand, 11832939 - 11832983
Alignment:
Q  79 tctcttatctcattctcaaaccctagccgtcattcctttcttctt 123  Q
    |||||| |||| |||||||||||||||||||||  ||||||||||    
T  11832939 tctcttctctccttctcaaaccctagccgtcatctctttcttctt 11832983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 190 - 234
Target Start/End: Complemental strand, 19895695 - 19895651
Alignment:
Q  190 attttcacatctgttacgttttttattttgtgatttcgtcgtctt 234  Q
    |||||| ||||| ||  ||||||||||||||||||||||||||||    
T  19895695 attttcgcatctattttgttttttattttgtgatttcgtcgtctt 19895651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 137 - 189
Target Start/End: Complemental strand, 26017777 - 26017725
Alignment:
Q  137 tgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttctat 189  Q
    ||||||| ||| ||||||||||| ||||||| |||||||| |||||||| |||    
T  26017777 tgatttatggttaatttttgacctaaaatcacccctctaattcgtttttttat 26017725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 131 - 167
Target Start/End: Complemental strand, 29805013 - 29804977
Alignment:
Q  131 gaggggtgatttagggtcaatttttgacccaaaatca 167  Q
    |||||||| ||||||||||||||||||||| ||||||    
T  29805013 gaggggtggtttagggtcaatttttgaccccaaatca 29804977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 190 - 246
Target Start/End: Complemental strand, 41748543 - 41748487
Alignment:
Q  190 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttg 246  Q
    |||||||||||| || |||||||  ||| ||||||||| |||||| |||||||||||    
T  41748543 attttcacatctatttcgtttttgctttcgtgatttcgccgtcttagtgcgacgttg 41748487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 190 - 254
Target Start/End: Original strand, 44681531 - 44681594
Alignment:
Q  190 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 254  Q
    |||||||||||| || ||||||  |||||||| |||||||||||  ||| |||||||||||||||    
T  44681531 attttcacatctatttcgttttg-attttgtggtttcgtcgtctcagtgtgacgttggtttgttc 44681594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 74; Significance: 5e-34; HSPs: 51)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 62 - 189
Target Start/End: Complemental strand, 4727118 - 4726995
Alignment:
Q  62 tcaagcctttttctctttctcttatctcattctcaaaccctagccgtcattcctttcttcttttcatcggaggggtgatttagggtcaatttttgaccca 161  Q
    ||||||||||||||||||||||| ||||   |||||||||||||| ||| ||||| ||||||||  |||||||||| |||||||||||||||||||||||    
T  4727118 tcaagcctttttctctttctcttctctc---ctcaaaccctagccatcactcctt-cttctttttgtcggaggggtaatttagggtcaatttttgaccca 4727023  T
Q  162 aaatcatccctctaactcgtttttctat 189  Q
    ||||||||| | ||||||||||||||||    
T  4727022 aaatcatccatataactcgtttttctat 4726995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 190 - 254
Target Start/End: Complemental strand, 10924177 - 10924113
Alignment:
Q  190 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 254  Q
    ||||| |||||| || |||||||||||||||||||||||||||||||||||||||||||||||||    
T  10924177 atttttacatctatttcgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 10924113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 190 - 254
Target Start/End: Complemental strand, 4726972 - 4726908
Alignment:
Q  190 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 254  Q
    ||||||||||||||||| ||| |||||||||||||||||||||||||||||| ||||||| ||||    
T  4726972 attttcacatctgttacatttcttattttgtgatttcgtcgtcttcgtgcgatgttggttagttc 4726908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 190 - 254
Target Start/End: Complemental strand, 6887222 - 6887158
Alignment:
Q  190 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 254  Q
    |||||||||||| ||  ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  6887222 attttcacatctattttgttttttcttttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 6887158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 190 - 254
Target Start/End: Original strand, 31645899 - 31645963
Alignment:
Q  190 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 254  Q
    |||||||||||| ||  |||||||||||||||||||| |||||||||||||||||||||||||||    
T  31645899 attttcacatctattttgttttttattttgtgatttcttcgtcttcgtgcgacgttggtttgttc 31645963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 131 - 187
Target Start/End: Complemental strand, 34894041 - 34893985
Alignment:
Q  131 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 187  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||    
T  34894041 gaggggtgatttacggtcaatttttgacccaaaatcacccctctaactcgtttttct 34893985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 207 - 254
Target Start/End: Complemental strand, 29310381 - 29310334
Alignment:
Q  207 gttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 254  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  29310381 gttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 29310334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 190 - 253
Target Start/End: Complemental strand, 41063440 - 41063377
Alignment:
Q  190 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgtt 253  Q
    |||||||||||| || ||||||||||||||||||||||||||||||||  ||||||||||||||    
T  41063440 attttcacatctatttcgttttttattttgtgatttcgtcgtcttcgtatgacgttggtttgtt 41063377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 131 - 189
Target Start/End: Original strand, 28618593 - 28618651
Alignment:
Q  131 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttctat 189  Q
    ||||||||||||| ||||||||||| ||||||||||| |||||||||||||||||||||    
T  28618593 gaggggtgatttaaggtcaatttttaacccaaaatcacccctctaactcgtttttctat 28618651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 192 - 249
Target Start/End: Original strand, 28618675 - 28618732
Alignment:
Q  192 tttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtt 249  Q
    |||||||||| ||  |||||||||||||||||||||||||||||||||||||||||||    
T  28618675 tttcacatctattttgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtt 28618732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 131 - 187
Target Start/End: Complemental strand, 9035073 - 9035017
Alignment:
Q  131 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 187  Q
    ||||||||||||| | |||||||||||| ||||||||||||||||||||||||||||    
T  9035073 gaggggtgatttatgatcaatttttgactcaaaatcatccctctaactcgtttttct 9035017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 131 - 186
Target Start/End: Complemental strand, 6887303 - 6887248
Alignment:
Q  131 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttc 186  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||||| |||||||    
T  6887303 gaggggtgatttagggtcaatttttaacccaaaatcacccctctaacttgtttttc 6887248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 131 - 186
Target Start/End: Original strand, 31645818 - 31645873
Alignment:
Q  131 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttc 186  Q
    ||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||    
T  31645818 gaggggtgatttagggtcaatttttgatccaaaatcacccctctaacttgtttttc 31645873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 208 - 254
Target Start/End: Complemental strand, 9034968 - 9034922
Alignment:
Q  208 ttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 254  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||    
T  9034968 ttttttattttgtgatttcatcgtcttcgtgcgacgttggtttgttc 9034922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 131 - 185
Target Start/End: Complemental strand, 29310474 - 29310420
Alignment:
Q  131 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgttttt 185  Q
    ||||||||||||||||||||||||||| ||||||||| |||||||||| ||||||    
T  29310474 gaggggtgatttagggtcaatttttgatccaaaatcacccctctaacttgttttt 29310420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 131 - 185
Target Start/End: Complemental strand, 33486695 - 33486641
Alignment:
Q  131 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgttttt 185  Q
    ||||||||||||||||||||||||||||||||||||| || ||||||| ||||||    
T  33486695 gaggggtgatttagggtcaatttttgacccaaaatcacccatctaacttgttttt 33486641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 132 - 189
Target Start/End: Original strand, 4070545 - 4070601
Alignment:
Q  132 aggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttctat 189  Q
    |||||||||||||||||| ||||||||||||||||| |||||| ||||||||||||||    
T  4070545 aggggtgatttagggtca-tttttgacccaaaatcacccctctgactcgtttttctat 4070601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 135 - 187
Target Start/End: Original strand, 41358031 - 41358084
Alignment:
Q  135 ggtgatttagggtcaatttttgacccaaaatca-tccctctaactcgtttttct 187  Q
    |||||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  41358031 ggtgatttagggtcaatttttgacccaaaatcaccccctctaactcgtttttct 41358084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 135 - 187
Target Start/End: Original strand, 2415393 - 2415445
Alignment:
Q  135 ggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 187  Q
    ||||||||||||||||||||||||||||||||| || ||||||| ||||||||    
T  2415393 ggtgatttagggtcaatttttgacccaaaatcacccttctaacttgtttttct 2415445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 190 - 254
Target Start/End: Original strand, 5378372 - 5378436
Alignment:
Q  190 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 254  Q
    ||||||| || |||| | ||||||||||||||||||||||||||||||||||  |||||||||||    
T  5378372 attttcatatttgttgcattttttattttgtgatttcgtcgtcttcgtgcgaaattggtttgttc 5378436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 190 - 254
Target Start/End: Complemental strand, 22397592 - 22397528
Alignment:
Q  190 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 254  Q
    |||||||||||| || || ||||| |||||||||||||||||||| ||||||||||| |||||||    
T  22397592 attttcacatctatttcggtttttcttttgtgatttcgtcgtcttagtgcgacgttgttttgttc 22397528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 138 - 185
Target Start/End: Complemental strand, 18472843 - 18472796
Alignment:
Q  138 gatttagggtcaatttttgacccaaaatcatccctctaactcgttttt 185  Q
    |||||||||||||||||||||||||||||| |||||||||| ||||||    
T  18472843 gatttagggtcaatttttgacccaaaatcacccctctaacttgttttt 18472796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 190 - 249
Target Start/End: Complemental strand, 32390691 - 32390632
Alignment:
Q  190 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtt 249  Q
    |||||||||||| || |||||||||||||||||||||||| | || ||||||||||||||    
T  32390691 attttcacatctatttcgttttttattttgtgatttcgtcatattagtgcgacgttggtt 32390632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 208 - 254
Target Start/End: Original strand, 2415488 - 2415534
Alignment:
Q  208 ttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 254  Q
    |||||||||||||||||| ||||||||| ||||||||||||||||||    
T  2415488 ttttttattttgtgattttgtcgtcttcatgcgacgttggtttgttc 2415534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 131 - 185
Target Start/End: Original strand, 41554475 - 41554529
Alignment:
Q  131 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgttttt 185  Q
    ||||||||||||||| ||||||||||| ||||||||| |||||||||| ||||||    
T  41554475 gaggggtgatttaggatcaatttttgatccaaaatcacccctctaacttgttttt 41554529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 131 - 184
Target Start/End: Original strand, 37424982 - 37425035
Alignment:
Q  131 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttt 184  Q
    ||||||||||||| ||||||||| |||||||||||||  |||||||||||||||    
T  37424982 gaggggtgatttatggtcaatttctgacccaaaatcacgcctctaactcgtttt 37425035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 131 - 187
Target Start/End: Complemental strand, 19646166 - 19646110
Alignment:
Q  131 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 187  Q
    |||||||| |||| ||||||| ||||||||||||||| ||||||||||| |||||||    
T  19646166 gaggggtggtttaaggtcaatgtttgacccaaaatcacccctctaactcatttttct 19646110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 131 - 187
Target Start/End: Original strand, 41988173 - 41988229
Alignment:
Q  131 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 187  Q
    ||||||||||||||| |||||||||||  |||||||  |||||||||||||||||||    
T  41988173 gaggggtgatttaggatcaatttttgattcaaaatcgcccctctaactcgtttttct 41988229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 210 - 249
Target Start/End: Original strand, 4070642 - 4070681
Alignment:
Q  210 ttttattttgtgatttcgtcgtcttcgtgcgacgttggtt 249  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  4070642 ttttattttgtgatttcgtcgtattcgtgcgacgttggtt 4070681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 131 - 186
Target Start/End: Complemental strand, 6648038 - 6647983
Alignment:
Q  131 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttc 186  Q
    |||||| |||||| |||||| ||||||||||||||||  |||||||||||||||||    
T  6648038 gaggggcgatttatggtcaaattttgacccaaaatcactcctctaactcgtttttc 6647983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 190 - 240
Target Start/End: Original strand, 28500787 - 28500837
Alignment:
Q  190 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcg 240  Q
    |||||||||||| || ||||||||||||||||||||| ||||||| |||||    
T  28500787 attttcacatctatttcgttttttattttgtgatttcttcgtcttagtgcg 28500837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 132 - 177
Target Start/End: Complemental strand, 8812276 - 8812231
Alignment:
Q  132 aggggtgatttagggtcaatttttgacccaaaatcatccctctaac 177  Q
    ||||||||| |||||||||||||| ||||||||||| |||||||||    
T  8812276 aggggtgatatagggtcaatttttaacccaaaatcacccctctaac 8812231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 206 - 254
Target Start/End: Complemental strand, 28423831 - 28423783
Alignment:
Q  206 cgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 254  Q
    ||||||||||||||||||||||||||| || || ||| |||||||||||    
T  28423831 cgttttttattttgtgatttcgtcgtcatcttgtgacattggtttgttc 28423783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 190 - 254
Target Start/End: Complemental strand, 33486613 - 33486549
Alignment:
Q  190 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 254  Q
    |||| ||||||| || ||||| || |||||||||||||||||||| ||||||| ||| |||||||    
T  33486613 atttacacatctatttcgtttctttttttgtgatttcgtcgtcttagtgcgaccttgttttgttc 33486549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 190 - 246
Target Start/End: Complemental strand, 34893960 - 34893904
Alignment:
Q  190 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttg 246  Q
    ||||||| |||| || | |||||||||||||||||| |||||||| |||||||||||    
T  34893960 attttcatatctatttcattttttattttgtgattttgtcgtctttgtgcgacgttg 34893904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 64 - 122
Target Start/End: Original strand, 5378254 - 5378313
Alignment:
Q  64 aagcctttttctctttctcttatctcattctcaaaccctag-ccgtcattcctttcttct 122  Q
    ||||||||||||||||| ||| |||  |||||||||||||| |||||| |||||||||||    
T  5378254 aagcctttttctctttcacttctctgcttctcaaaccctagcccgtcactcctttcttct 5378313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 190 - 253
Target Start/End: Complemental strand, 19646085 - 19646022
Alignment:
Q  190 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgtt 253  Q
    |||||||||||| || ||||||||||||||||||||  ||||||| ||||| |||  |||||||    
T  19646085 attttcacatctatttcgttttttattttgtgattttatcgtctttgtgcggcgtcagtttgtt 19646022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 207 - 246
Target Start/End: Original strand, 35906384 - 35906423
Alignment:
Q  207 gttttttattttgtgatttcgtcgtcttcgtgcgacgttg 246  Q
    |||||||||||||| ||||||||||||| |||||||||||    
T  35906384 gttttttattttgtaatttcgtcgtctttgtgcgacgttg 35906423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 208 - 254
Target Start/End: Original strand, 20270802 - 20270848
Alignment:
Q  208 ttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 254  Q
    |||||| | |||||||||||||||||| ||||||||||| |||||||    
T  20270802 ttttttttgttgtgatttcgtcgtcttagtgcgacgttgttttgttc 20270848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 192 - 254
Target Start/End: Original strand, 34866499 - 34866561
Alignment:
Q  192 tttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 254  Q
    ||||| |||| || |||||||| ||| |||||||||||||||| ||||||||||  |||||||    
T  34866499 tttcatatctatttcgttttttctttcgtgatttcgtcgtcttagtgcgacgttattttgttc 34866561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 130 - 186
Target Start/End: Original strand, 34873848 - 34873905
Alignment:
Q  130 ggaggggtgatttagggtcaa-tttttgacccaaaatcatccctctaactcgtttttc 186  Q
    ||||||||||||||||||||| ||||| | | ||||||| || |||||||||||||||    
T  34873848 ggaggggtgatttagggtcaatttttttatcgaaaatcacccttctaactcgtttttc 34873905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 6682082 - 6682030
Alignment:
Q  71 tttctctttctcttatctcattctcaaaccctagccgtcattcctttcttctt 123  Q
    ||||||| ||||||||||  ||||||||||| | ||||||| |||||||||||    
T  6682082 tttctctctctcttatctacttctcaaaccccaaccgtcatccctttcttctt 6682030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 190 - 254
Target Start/End: Complemental strand, 8812195 - 8812131
Alignment:
Q  190 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 254  Q
    ||||||| |||| || |||||||  ||| ||||||||| |||||| ||||||||||| |||||||    
T  8812195 attttcatatctatttcgtttttgctttcgtgatttcgccgtcttagtgcgacgttgttttgttc 8812131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 190 - 246
Target Start/End: Original strand, 13007762 - 13007818
Alignment:
Q  190 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttg 246  Q
    |||||||||||| || | |||||| ||| |||||||||||||||| |||| ||||||    
T  13007762 attttcacatctatttctttttttctttcgtgatttcgtcgtcttagtgcaacgttg 13007818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 190 - 246
Target Start/End: Original strand, 13079215 - 13079271
Alignment:
Q  190 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttg 246  Q
    |||||||||||| || | |||||| ||| |||||||||||||||| |||| ||||||    
T  13079215 attttcacatctatttctttttttctttcgtgatttcgtcgtcttagtgcaacgttg 13079271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 190 - 246
Target Start/End: Original strand, 13080223 - 13080279
Alignment:
Q  190 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttg 246  Q
    |||||||||||| || | |||||| ||| |||||||||||||||| |||| ||||||    
T  13080223 attttcacatctatttctttttttctttcgtgatttcgtcgtcttagtgcaacgttg 13080279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 134 - 187
Target Start/End: Original strand, 15710532 - 15710587
Alignment:
Q  134 gggtgatttagggtcaatttttg--acccaaaatcatccctctaactcgtttttct 187  Q
    |||||||||| |||||||||||   | ||||||||| |||||||||||||||||||    
T  15710532 gggtgatttatggtcaattttttttatccaaaatcacccctctaactcgtttttct 15710587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 137 - 185
Target Start/End: Complemental strand, 22397667 - 22397619
Alignment:
Q  137 tgatttagggtcaatttttgacccaaaatcatccctctaactcgttttt 185  Q
    ||||||||||||||| ||||| | |||||||||  ||||||||||||||    
T  22397667 tgatttagggtcaatatttgatcgaaaatcatcaatctaactcgttttt 22397619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 70 - 110
Target Start/End: Complemental strand, 39180027 - 39179987
Alignment:
Q  70 ttttctctttctcttatctcattctcaaaccctagccgtca 110  Q
    |||| ||| |||||| |||||||||||||||||||||||||    
T  39180027 ttttatctctctcttctctcattctcaaaccctagccgtca 39179987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 131 - 187
Target Start/End: Complemental strand, 40565280 - 40565224
Alignment:
Q  131 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 187  Q
    |||||||| ||||||||  ||||||||||| |||||| | |||||| ||||||||||    
T  40565280 gaggggtggtttagggttgatttttgaccccaaatcacctctctaaatcgtttttct 40565224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 143 - 187
Target Start/End: Complemental strand, 41063509 - 41063465
Alignment:
Q  143 agggtcaatttttgacccaaaatcatccctctaactcgtttttct 187  Q
    |||||||||||||||| ||||||||  | ||||||||||||||||    
T  41063509 agggtcaatttttgactcaaaatcactcatctaactcgtttttct 41063465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 70; Significance: 1e-31; HSPs: 68)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 96 - 254
Target Start/End: Original strand, 42971992 - 42972172
Alignment:
Q  96 aaaccctagccgtcattcctttcttcttttcatcggaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttctat------ 189  Q
    ||||||||||||||| ||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||  | ||||||| ||||||||||          
T  42971992 aaaccctagccgtcactcctttcttgttttcgtcggaagggtgatttagggtcaatttttgacccaaaatcactcatctaacttgtttttctattttgct 42972091  T
Q  190 ----------------attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 254  Q
                    |||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  42972092 tttattgaaataagtgattttcacatttgttacgttttttattttgtggtttcgtcgtcttcgtgcgacgttggtttgttc 42972172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 130 - 254
Target Start/End: Complemental strand, 23067974 - 23067828
Alignment:
Q  130 ggaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttctat----------------------attttcacatctgttacg 207  Q
    ||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||                      ||||||||||||||||||    
T  23067974 ggaggggtgatttagggtcaatttttgaccctaaatcacccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacg 23067875  T
Q  208 ttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 254  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  23067874 ttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 23067828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 90 - 189
Target Start/End: Complemental strand, 52555887 - 52555788
Alignment:
Q  90 attctcaaaccctagccgtcattcctttcttcttttcatcggaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttctat 189  Q
    |||||||||| |||  ||||| ||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| | |||||||||||||||||||    
T  52555887 attctcaaactctaatcgtcactcctttcttcttttcgtcggaggggtgatttagggacaatttttgacccaaaatcacctctctaactcgtttttctat 52555788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 64 - 254
Target Start/End: Complemental strand, 46717095 - 46716874
Alignment:
Q  64 aagcctttttctctttctcttatctcattctcaaaccctagccgtcattcctttcttcttttcatcggaggggtgatttagggtcaattttt-------- 155  Q
    ||||||||||||||||||||| |||| ||||||||  |||| ||||| ||||||||||||||||||||| ||||||||||||||||||||||            
T  46717095 aagcctttttctctttctcttctctccttctcaaattctagtcgtcactcctttcttcttttcatcggatgggtgatttagggtcaatttttgatcaaat 46716996  T
Q  156 -gacccaaaatcatccctctaactcgtttttctat----------------------attttcacatctgttacgttttttattttgtgatttcgtcgtc 232  Q
     ||||| |||||| | |||||||||||||||||||                      |||||| ||||| ||||||||||||||||||||||||||| ||    
T  46716995 tgaccctaaatcacctctctaactcgtttttctattttccttttattgaaataagtgattttcgcatctattacgttttttattttgtgatttcgtcatc 46716896  T
Q  233 ttcgtgcgacgttggtttgttc 254  Q
    ||||||||||||||||||||||    
T  46716895 ttcgtgcgacgttggtttgttc 46716874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 190 - 254
Target Start/End: Complemental strand, 50003220 - 50003156
Alignment:
Q  190 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 254  Q
    |||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||    
T  50003220 attttcacatctatttcgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 50003156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 190 - 254
Target Start/End: Complemental strand, 9474583 - 9474519
Alignment:
Q  190 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 254  Q
    |||||||||||| || |||||||||||||||||||||||||| ||||||||||||||||||||||    
T  9474583 attttcacatctatttcgttttttattttgtgatttcgtcgtattcgtgcgacgttggtttgttc 9474519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 190 - 254
Target Start/End: Original strand, 9661923 - 9661987
Alignment:
Q  190 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 254  Q
    |||||||||||| ||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  9661923 attttcacatctattttgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 9661987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 190 - 254
Target Start/End: Complemental strand, 14542556 - 14542492
Alignment:
Q  190 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 254  Q
    |||||||||||| ||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  14542556 attttcacatctattttgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 14542492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 134 - 187
Target Start/End: Original strand, 28588553 - 28588606
Alignment:
Q  134 gggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 187  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  28588553 gggtgatttagggtcaatttttgacccaaaatcacccctctaactcgtttttct 28588606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 190 - 254
Target Start/End: Original strand, 4634353 - 4634417
Alignment:
Q  190 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 254  Q
    |||||||||||| ||  |||||||| |||||||||||||||||||||||||||||||||||||||    
T  4634353 attttcacatctattttgttttttaatttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 4634417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 131 - 187
Target Start/End: Original strand, 9661842 - 9661898
Alignment:
Q  131 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 187  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||    
T  9661842 gaggggtgatttagggtcaatttttgacccaaaatcacccctctaacttgtttttct 9661898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 190 - 254
Target Start/End: Original strand, 12519726 - 12519790
Alignment:
Q  190 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 254  Q
    |||||||||||| ||  |||||||||||||||||||||||||||| |||||||||||||||||||    
T  12519726 attttcacatctattttgttttttattttgtgatttcgtcgtcttagtgcgacgttggtttgttc 12519790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 190 - 254
Target Start/End: Complemental strand, 44375308 - 44375244
Alignment:
Q  190 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 254  Q
    |||||||||||| || | |||||||||||||||||||||||||||||||||||||| ||||||||    
T  44375308 attttcacatctatttctttttttattttgtgatttcgtcgtcttcgtgcgacgttcgtttgttc 44375244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 131 - 186
Target Start/End: Complemental strand, 14542637 - 14542582
Alignment:
Q  131 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttc 186  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||| |||||||    
T  14542637 gaggggtgatttagggtcaatttttgacccaaaatcatctctctaacttgtttttc 14542582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 134 - 189
Target Start/End: Complemental strand, 54420834 - 54420779
Alignment:
Q  134 gggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttctat 189  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||    
T  54420834 gggtgatttagggtcaatttttgacccaaaatcactcctctaactcgtttttctat 54420779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 135 - 189
Target Start/End: Original strand, 16991865 - 16991919
Alignment:
Q  135 ggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttctat 189  Q
    ||||||||||||||||||||||||||||||||| || ||||||||||||||||||    
T  16991865 ggtgatttagggtcaatttttgacccaaaatcacccatctaactcgtttttctat 16991919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 190 - 254
Target Start/End: Complemental strand, 31601403 - 31601338
Alignment:
Q  190 attttcacatctgttacgtttttt-attttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 254  Q
    |||||||||||| || |||||||| |||||||||||||||||||||| ||||||||||||||||||    
T  31601403 attttcacatctatttcgtttttttattttgtgatttcgtcgtcttcttgcgacgttggtttgttc 31601338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 190 - 254
Target Start/End: Original strand, 2945207 - 2945271
Alignment:
Q  190 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 254  Q
    |||||||||||| || ||||||||||||||||||||| ||||| | |||||||||||||||||||    
T  2945207 attttcacatctatttcgttttttattttgtgatttcatcgtcatagtgcgacgttggtttgttc 2945271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 131 - 187
Target Start/End: Original strand, 3673612 - 3673668
Alignment:
Q  131 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 187  Q
    |||||||||||||||||||||||||||||| |||||| |||||||| ||||||||||    
T  3673612 gaggggtgatttagggtcaatttttgaccccaaatcacccctctaaatcgtttttct 3673668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 131 - 187
Target Start/End: Original strand, 41486564 - 41486620
Alignment:
Q  131 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 187  Q
    ||||||| ||||||||||||||||||| ||||||||| |||||||||||||||||||    
T  41486564 gaggggttatttagggtcaatttttgatccaaaatcacccctctaactcgtttttct 41486620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 190 - 254
Target Start/End: Original strand, 41486645 - 41486709
Alignment:
Q  190 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 254  Q
    |||||||||||| || |||||||||||||||||||| |||||||| |||||| ||||||||||||    
T  41486645 attttcacatctatttcgttttttattttgtgattttgtcgtctttgtgcgatgttggtttgttc 41486709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 131 - 186
Target Start/End: Original strand, 4634272 - 4634327
Alignment:
Q  131 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttc 186  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||||| |||||||    
T  4634272 gaggggtgatttaaggtcaatttttgacccaaaatcacccctctaacttgtttttc 4634327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 190 - 254
Target Start/End: Original strand, 32189053 - 32189114
Alignment:
Q  190 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 254  Q
    |||||||||||| || ||||||||   ||||||||||||||||||||||||||||||||||||||    
T  32189053 attttcacatctatttcgtttttt---ttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 32189114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 208 - 254
Target Start/End: Complemental strand, 34115677 - 34115631
Alignment:
Q  208 ttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 254  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  34115677 ttttttattttgtgatttcgtcgtcttcgtgcgacgttggtatgttc 34115631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 131 - 189
Target Start/End: Complemental strand, 46729044 - 46728987
Alignment:
Q  131 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttctat 189  Q
    ||||||||||||||||||||||||||||||||||||| |||||||| | ||||||||||    
T  46729044 gaggggtgatttagggtcaatttttgacccaaaatca-ccctctaatttgtttttctat 46728987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 192 - 246
Target Start/End: Complemental strand, 54420755 - 54420701
Alignment:
Q  192 tttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttg 246  Q
    |||||||||| || ||||||||||||||||||||||||||||| |||||||||||    
T  54420755 tttcacatctatttcgttttttattttgtgatttcgtcgtctttgtgcgacgttg 54420701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 134 - 187
Target Start/End: Complemental strand, 4959697 - 4959644
Alignment:
Q  134 gggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 187  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||| |||||||    
T  4959697 gggtgatttagggtcaatttttgatccaaaatcatcactctaactcatttttct 4959644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 190 - 239
Target Start/End: Complemental strand, 52555765 - 52555716
Alignment:
Q  190 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgc 239  Q
    |||||||||||| ||||||||||||||||||||||| |||||||||||||    
T  52555765 attttcacatcttttacgttttttattttgtgattttgtcgtcttcgtgc 52555716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 190 - 261
Target Start/End: Complemental strand, 1657610 - 1657539
Alignment:
Q  190 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttcttcatct 261  Q
    |||||||||||| || || ||||| |||||||||||||||||||| ||||||| ||| ||||||| ||||||    
T  1657610 attttcacatctatttcgctttttcttttgtgatttcgtcgtcttagtgcgacattgttttgttcgtcatct 1657539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 137 - 187
Target Start/End: Complemental strand, 1646060 - 1646010
Alignment:
Q  137 tgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 187  Q
    ||||||||||| |||| |||||||||||||| |||||||||||||||||||    
T  1646060 tgatttagggttaattgttgacccaaaatcacccctctaactcgtttttct 1646010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 135 - 185
Target Start/End: Original strand, 3169033 - 3169083
Alignment:
Q  135 ggtgatttagggtcaatttttgacccaaaatcatccctctaactcgttttt 185  Q
    |||||||||| ||||||| |||||||||||||| |||||||||||||||||    
T  3169033 ggtgatttagagtcaattattgacccaaaatcacccctctaactcgttttt 3169083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 190 - 252
Target Start/End: Original strand, 9549537 - 9549599
Alignment:
Q  190 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgt 252  Q
    |||| ||||||| || ||||||||||||| ||||||||||||| |||||| ||||||||||||    
T  9549537 atttccacatctatttcgttttttattttttgatttcgtcgtcgtcgtgctacgttggtttgt 9549599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 131 - 184
Target Start/End: Original strand, 43156765 - 43156819
Alignment:
Q  131 gaggggtgattta-gggtcaatttttgacccaaaatcatccctctaactcgtttt 184  Q
    ||||||||||||| |||||||||||||||||||||||| ||||||||| ||||||    
T  43156765 gaggggtgatttacgggtcaatttttgacccaaaatcacccctctaacacgtttt 43156819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 192 - 246
Target Start/End: Original strand, 53903681 - 53903735
Alignment:
Q  192 tttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttg 246  Q
    |||||||||| || | |||||||||||||||||||||||||||||| ||||||||    
T  53903681 tttcacatctatttcattttttattttgtgatttcgtcgtcttcgtacgacgttg 53903735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 79 - 164
Target Start/End: Complemental strand, 478205 - 478121
Alignment:
Q  79 tctcttatctcattctcaaaccctagccgtcattcctttcttcttttcatcggaggggtgatttagggtcaatttttgacccaaaa 164  Q
    |||||| |||| ||||||||||||||||||||  ||||||||||| |  |  ||||||||||||| |||||| |||||||||||||    
T  478205 tctcttctctccttctcaaaccctagccgtcacccctttcttcttctttttagaggggtgatttatggtcaa-ttttgacccaaaa 478121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 135 - 176
Target Start/End: Complemental strand, 1657691 - 1657650
Alignment:
Q  135 ggtgatttagggtcaatttttgacccaaaatcatccctctaa 176  Q
    ||||||||||||||||||||||||||||||||| ||||||||    
T  1657691 ggtgatttagggtcaatttttgacccaaaatcacccctctaa 1657650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 131 - 187
Target Start/End: Original strand, 5388504 - 5388560
Alignment:
Q  131 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 187  Q
    ||||||||||||||||||||||||||| |  |||||| |||||||| ||||||||||    
T  5388504 gaggggtgatttagggtcaatttttgaactcaaatcacccctctaaatcgtttttct 5388560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 190 - 249
Target Start/End: Original strand, 20961521 - 20961578
Alignment:
Q  190 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtt 249  Q
    |||||||||||| || ||||||  ||||||||||||| ||||||||||||||||||||||    
T  20961521 attttcacatctatttcgtttt--attttgtgatttcatcgtcttcgtgcgacgttggtt 20961578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 190 - 254
Target Start/End: Original strand, 28990368 - 28990432
Alignment:
Q  190 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 254  Q
    |||||||||||| ||  ||||||||||||| ||||| |||||| | |||||||||||||||||||    
T  28990368 attttcacatctattttgttttttattttgggattttgtcgtcatagtgcgacgttggtttgttc 28990432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 139 - 187
Target Start/End: Complemental strand, 34115769 - 34115721
Alignment:
Q  139 atttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 187  Q
    ||||||||||||||||||||||||||||| |||||||  ||||||||||    
T  34115769 atttagggtcaatttttgacccaaaatcacccctctagttcgtttttct 34115721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 190 - 254
Target Start/End: Complemental strand, 44021615 - 44021551
Alignment:
Q  190 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 254  Q
    |||||||||||| |  |||||||||||||||||||| ||||||||  || |||||||||||||||    
T  44021615 attttcacatctatatcgttttttattttgtgattttgtcgtcttaatgtgacgttggtttgttc 44021551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 71 - 164
Target Start/End: Complemental strand, 394473 - 394384
Alignment:
Q  71 tttctctttctcttatctcattctcaaaccctagccgtcattcctttcttcttttcatcggaggggtgatttagggtcaatttttgacccaaaa 164  Q
    ||||||| |||||| |||| ||||||||||||||  ||||  | |||||||||||    ||||||||||||||||||||| |||||||||||||    
T  394473 tttctctctctcttctctctttctcaaaccctagttgtcacccttttcttcttttt---ggaggggtgatttagggtcaa-ttttgacccaaaa 394384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 132 - 187
Target Start/End: Complemental strand, 7242893 - 7242838
Alignment:
Q  132 aggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 187  Q
    ||||| |||||||||||||||||||||||||||||| |  ||||||| ||||||||    
T  7242893 aggggcgatttagggtcaatttttgacccaaaatcacctttctaacttgtttttct 7242838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 208 - 254
Target Start/End: Original strand, 38434687 - 38434733
Alignment:
Q  208 ttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 254  Q
    |||||| |||||||||||||||||||| ||||||||||| |||||||    
T  38434687 ttttttcttttgtgatttcgtcgtcttagtgcgacgttgttttgttc 38434733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 79 - 164
Target Start/End: Complemental strand, 43244578 - 43244491
Alignment:
Q  79 tctcttatctcattctcaaaccctagccgtcattcct---ttcttcttttcatcggaggggtgatttagggtcaatttttgacccaaaa 164  Q
    |||||| |||| ||||||||||||||||||||| | |   ||||||||||  |  |||||||||||||||||||| |||||||||||||    
T  43244578 tctcttctctctttctcaaaccctagccgtcatccttttcttcttcttttttttagaggggtgatttagggtcaa-ttttgacccaaaa 43244491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 119 - 189
Target Start/End: Complemental strand, 44375401 - 44375331
Alignment:
Q  119 ttcttttcatcggaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttctat 189  Q
    ||||||| ||| || | |||||||| |||||||||||||| ||||||||  ||||||| ||||||||||||    
T  44375401 ttctttttatcagatgagtgatttaaggtcaatttttgactcaaaatcactcctctaattcgtttttctat 44375331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 136 - 185
Target Start/End: Complemental strand, 37869536 - 37869488
Alignment:
Q  136 gtgatttagggtcaatttttgacccaaaatcatccctctaactcgttttt 185  Q
    ||||||||||||||||| || ||| |||||||||||||||||||||||||    
T  37869536 gtgatttagggtcaattgtttacc-aaaatcatccctctaactcgttttt 37869488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 187
Target Start/End: Complemental strand, 4622836 - 4622780
Alignment:
Q  131 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 187  Q
    ||||||||||||| ||||||||||||| ||||||||| | || || |||||||||||    
T  4622836 gaggggtgatttaaggtcaatttttgatccaaaatcacctctgtatctcgtttttct 4622780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 187
Target Start/End: Original strand, 11817061 - 11817117
Alignment:
Q  131 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 187  Q
    |||||||| |||||||| || |||||||||||||||| |||||||  ||||||||||    
T  11817061 gaggggtggtttagggttaagttttgacccaaaatcacccctctacatcgtttttct 11817117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 190 - 254
Target Start/End: Original strand, 40859716 - 40859780
Alignment:
Q  190 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 254  Q
    |||||||||||| || |||||||  ||| ||||||||| |||||| ||||||||||| |||||||    
T  40859716 attttcacatctatttcgtttttgctttcgtgatttcgccgtcttagtgcgacgttgttttgttc 40859780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 187
Target Start/End: Complemental strand, 46775965 - 46775925
Alignment:
Q  147 tcaatttttgacccaaaatcatccctctaactcgtttttct 187  Q
    ||||||||||||||||||||||| ||||| |||||||||||    
T  46775965 tcaatttttgacccaaaatcatcactctatctcgtttttct 46775925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 132 - 187
Target Start/End: Complemental strand, 29577209 - 29577154
Alignment:
Q  132 aggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 187  Q
    |||||||||||||||||| |||||||| ||||||   ||||||| |||||||||||    
T  29577209 aggggtgatttagggtcactttttgactcaaaatatcccctctatctcgtttttct 29577154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 210 - 249
Target Start/End: Complemental strand, 30470145 - 30470107
Alignment:
Q  210 ttttattttgtgatttcgtcgtcttcgtgcgacgttggtt 249  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  30470145 ttttattttgtgatt-cgtcgtcttcgtgcgacgttggtt 30470107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 190 - 253
Target Start/End: Complemental strand, 37869461 - 37869398
Alignment:
Q  190 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgtt 253  Q
    |||||||||||| ||   |||| |||| |||||||| ||||||||| |||||||||||||||||    
T  37869461 attttcacatctattttattttgtattatgtgattttgtcgtcttcttgcgacgttggtttgtt 37869398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 185
Target Start/End: Original strand, 1124929 - 1124979
Alignment:
Q  135 ggtgatttagggtcaatttttgacccaaaatcatccctctaactcgttttt 185  Q
    ||||||||||  |||||||||||||||||||||| | |||||||| |||||    
T  1124929 ggtgatttagaatcaatttttgacccaaaatcattcatctaactcattttt 1124979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 244
Target Start/End: Complemental strand, 4622733 - 4622699
Alignment:
Q  210 ttttattttgtgatttcgtcgtcttcgtgcgacgt 244  Q
    ||||||||||||||||||||||||| |||||||||    
T  4622733 ttttattttgtgatttcgtcgtcttagtgcgacgt 4622699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 185
Target Start/End: Original strand, 6408433 - 6408483
Alignment:
Q  135 ggtgatttagggtcaatttttgacccaaaatcatccctctaactcgttttt 185  Q
    ||||||| ||||||||||||| ||||||||||| | || ||||||||||||    
T  6408433 ggtgattaagggtcaattttttacccaaaatcacctctttaactcgttttt 6408483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 254
Target Start/End: Complemental strand, 6789914 - 6789856
Alignment:
Q  196 acatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 254  Q
    |||||| || |||||||||||||||||||| |||||||| ||||  |||| ||||||||    
T  6789914 acatctatttcgttttttattttgtgattttgtcgtcttagtgcagcgtttgtttgttc 6789856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 86 - 123
Target Start/End: Original strand, 24825562 - 24825599
Alignment:
Q  86 tctcattctcaaaccctagccgtcattcctttcttctt 123  Q
    |||| |||||||||||||||||||| ||||||||||||    
T  24825562 tctctttctcaaaccctagccgtcactcctttcttctt 24825599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 208 - 253
Target Start/End: Complemental strand, 29589387 - 29589342
Alignment:
Q  208 ttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgtt 253  Q
    |||||| |||||| ||||||||||||| ||||||||||| ||||||    
T  29589387 ttttttcttttgttatttcgtcgtcttagtgcgacgttgttttgtt 29589342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 132 - 185
Target Start/End: Complemental strand, 30416746 - 30416693
Alignment:
Q  132 aggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgttttt 185  Q
    |||||| ||||| ||||||||||||| |||||||||  ||||||||| ||||||    
T  30416746 aggggtaatttatggtcaatttttgaaccaaaatcacacctctaacttgttttt 30416693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 190 - 254
Target Start/End: Complemental strand, 7242813 - 7242749
Alignment:
Q  190 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 254  Q
    |||||||||||| || | ||||||||| |||||| | |||||||| ||||||||| | |||||||    
T  7242813 attttcacatctatttcattttttattctgtgatattgtcgtcttagtgcgacgtcgatttgttc 7242749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 206 - 254
Target Start/End: Complemental strand, 15730009 - 15729961
Alignment:
Q  206 cgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 254  Q
    ||||| || |||||||||||||||||||| ||||||| ||| |||||||    
T  15730009 cgtttctttttttgtgatttcgtcgtcttagtgcgaccttgttttgttc 15729961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 190 - 254
Target Start/End: Original strand, 43156846 - 43156910
Alignment:
Q  190 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 254  Q
    ||||||||||||  |  |||||||  ||||||||||||||||||| |||| |||||| |||||||    
T  43156846 attttcacatctactttgtttttttctttgtgatttcgtcgtcttagtgcaacgttgttttgttc 43156910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 206 - 254
Target Start/End: Complemental strand, 46728948 - 46728900
Alignment:
Q  206 cgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 254  Q
    ||||| || |||||||||||||||||||| ||||||| ||| |||||||    
T  46728948 cgtttctttttttgtgatttcgtcgtcttagtgcgaccttgttttgttc 46728900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 137 - 185
Target Start/End: Original strand, 51646088 - 51646136
Alignment:
Q  137 tgatttagggtcaatttttgacccaaaatcatccctctaactcgttttt 185  Q
    ||||||| ||||||||||| ||| ||||||| |||||||| ||||||||    
T  51646088 tgatttatggtcaatttttaacctaaaatcacccctctaattcgttttt 51646136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 190 - 234
Target Start/End: Original strand, 51646163 - 51646207
Alignment:
Q  190 attttcacatctgttacgttttttattttgtgatttcgtcgtctt 234  Q
    |||||||||||| || |||||||| ||| ||||||||||||||||    
T  51646163 attttcacatctatttcgttttttctttcgtgatttcgtcgtctt 51646207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 189
Target Start/End: Original strand, 53903617 - 53903657
Alignment:
Q  149 aatttttgacccaaaatcatccctctaactcgtttttctat 189  Q
    |||||||||||| ||||||  ||||||||||||||||||||    
T  53903617 aatttttgaccctaaatcactcctctaactcgtttttctat 53903657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 57; Significance: 7e-24; HSPs: 64)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 190 - 254
Target Start/End: Original strand, 54240156 - 54240220
Alignment:
Q  190 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 254  Q
    |||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||    
T  54240156 attttcacatctatttcgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 54240220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 131 - 259
Target Start/End: Original strand, 45664218 - 45664360
Alignment:
Q  131 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttctat--------------attttcacatctgttacgttttttatt 216  Q
    ||||||||||||||| |||| |||||||||||||||| |||||||||||||||||||||              |||||||||||| || |||||||||||    
T  45664218 gaggggtgatttaggatcaaattttgacccaaaatcacccctctaactcgtttttctatttctcttttaagtgattttcacatctatttcgttttttatt 45664317  T
Q  217 ttgtgatttcgtcgtcttcgtgcgacgttggtttgttcttcat 259  Q
    |||||||||||| |||||||||| ||||| |||| ||| ||||    
T  45664318 ttgtgatttcgttgtcttcgtgctacgttcgttttttcgtcat 45664360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 190 - 254
Target Start/End: Complemental strand, 1165440 - 1165376
Alignment:
Q  190 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 254  Q
    |||||||||||| ||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  1165440 attttcacatctattttgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 1165376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 131 - 187
Target Start/End: Complemental strand, 20201183 - 20201127
Alignment:
Q  131 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 187  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  20201183 gaggggtgatttagggtcaatttttgacccaaaatcacccctctaactcgtttttct 20201127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 131 - 187
Target Start/End: Complemental strand, 20203365 - 20203309
Alignment:
Q  131 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 187  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  20203365 gaggggtgatttagggtcaatttttgacccaaaatcacccctctaactcgtttttct 20203309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 190 - 254
Target Start/End: Original strand, 43029753 - 43029817
Alignment:
Q  190 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 254  Q
    |||||||||||| ||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  43029753 attttcacatctattttgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 43029817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 190 - 249
Target Start/End: Complemental strand, 47914637 - 47914578
Alignment:
Q  190 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtt 249  Q
    |||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||    
T  47914637 attttcacatctatttcgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtt 47914578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 134 - 189
Target Start/End: Original strand, 50519782 - 50519837
Alignment:
Q  134 gggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttctat 189  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  50519782 gggtgatttagggtcaatttttgacccaaaatcacccctctaactcgtttttctat 50519837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 192 - 249
Target Start/End: Complemental strand, 3088705 - 3088648
Alignment:
Q  192 tttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtt 249  Q
    |||||||||| || ||||||||||||||||||||||||||||||||||||||||||||    
T  3088705 tttcacatctatttcgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtt 3088648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 131 - 187
Target Start/End: Complemental strand, 1165521 - 1165465
Alignment:
Q  131 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 187  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||    
T  1165521 gaggggtgatttagggtcaatttttgacccaaaatcacccctctaacttgtttttct 1165465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 190 - 254
Target Start/End: Original strand, 21803600 - 21803664
Alignment:
Q  190 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 254  Q
    |||||||||||| || ||||||||||||||||||||||| ||||||||||||| |||||||||||    
T  21803600 attttcacatctatttcgttttttattttgtgatttcgtagtcttcgtgcgacattggtttgttc 21803664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 190 - 254
Target Start/End: Complemental strand, 43839562 - 43839498
Alignment:
Q  190 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 254  Q
    |||||||||||| || |||||||||||||||||||||||| ||||||||||| ||||||||||||    
T  43839562 attttcacatctatttcgttttttattttgtgatttcgtcatcttcgtgcgatgttggtttgttc 43839498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 190 - 249
Target Start/End: Complemental strand, 14741369 - 14741310
Alignment:
Q  190 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtt 249  Q
    |||||||||||| || | ||||||||||||||||||||||||||||||||||||||||||    
T  14741369 attttcacatctatttcattttttattttgtgatttcgtcgtcttcgtgcgacgttggtt 14741310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 131 - 189
Target Start/End: Complemental strand, 22286874 - 22286816
Alignment:
Q  131 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttctat 189  Q
    ||||||||||||||||||||||||||||| ||||| | |||||||||||||||||||||    
T  22286874 gaggggtgatttagggtcaatttttgacctaaaattacccctctaactcgtttttctat 22286816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 131 - 189
Target Start/End: Complemental strand, 41882533 - 41882475
Alignment:
Q  131 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttctat 189  Q
    |||| |||||||||||||||||||||||||||||| | |||||||||||||||||||||    
T  41882533 gaggagtgatttagggtcaatttttgacccaaaattacccctctaactcgtttttctat 41882475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 192 - 249
Target Start/End: Complemental strand, 22286792 - 22286735
Alignment:
Q  192 tttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtt 249  Q
    |||||||||| || ||||||||||||||||||||||||||||||| ||||||||||||    
T  22286792 tttcacatctatttcgttttttattttgtgatttcgtcgtcttcgcgcgacgttggtt 22286735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 134 - 187
Target Start/End: Complemental strand, 35501881 - 35501828
Alignment:
Q  134 gggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 187  Q
    |||||||||||||| ||||||||||||||||||| |||||||||||||||||||    
T  35501881 gggtgatttagggttaatttttgacccaaaatcacccctctaactcgtttttct 35501828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 192 - 249
Target Start/End: Complemental strand, 41882451 - 41882394
Alignment:
Q  192 tttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtt 249  Q
    |||||||||| ||  |||||||||||||||||||||||||||||||||||||||||||    
T  41882451 tttcacatctattttgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtt 41882394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 190 - 254
Target Start/End: Complemental strand, 29182652 - 29182588
Alignment:
Q  190 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 254  Q
    ||||||| |||| ||  |||||||||||||||||||||||||||||||| |||||||||||||||    
T  29182652 attttcatatctattttgttttttattttgtgatttcgtcgtcttcgtgtgacgttggtttgttc 29182588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 208 - 261
Target Start/End: Complemental strand, 22893741 - 22893688
Alignment:
Q  208 ttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttcttcatct 261  Q
    |||||||||||||||||||||| |||| ||||||||||||||||||| ||||||    
T  22893741 ttttttattttgtgatttcgtcttcttagtgcgacgttggtttgttcgtcatct 22893688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 134 - 187
Target Start/End: Complemental strand, 25374192 - 25374139
Alignment:
Q  134 gggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 187  Q
    |||||||||||||| ||||||||||| ||||||| |||||||||||||||||||    
T  25374192 gggtgatttagggttaatttttgacctaaaatcacccctctaactcgtttttct 25374139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 131 - 187
Target Start/End: Complemental strand, 1220340 - 1220284
Alignment:
Q  131 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 187  Q
    ||||||||||||||| |||||||||||  |||||||| |||||||||||||||||||    
T  1220340 gaggggtgatttaggatcaatttttgattcaaaatcacccctctaactcgtttttct 1220284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 131 - 187
Target Start/End: Original strand, 21803519 - 21803575
Alignment:
Q  131 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 187  Q
    |||| |||||| || |||||||||||||||||||||| |||||||||||||||||||    
T  21803519 gaggagtgattcagtgtcaatttttgacccaaaatcacccctctaactcgtttttct 21803575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 190 - 254
Target Start/End: Complemental strand, 35501803 - 35501739
Alignment:
Q  190 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 254  Q
    |||||||||||| || |||||||||||||||||||| ||||||||| || |||||| ||||||||    
T  35501803 attttcacatctatttcgttttttattttgtgattttgtcgtcttcatgtgacgttagtttgttc 35501739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 190 - 253
Target Start/End: Complemental strand, 20201102 - 20201039
Alignment:
Q  190 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgtt 253  Q
    |||||||||||| ||  |||||||||||| |||||||||||| |||||||||| ||||||||||    
T  20201102 attttcacatctattttgttttttattttatgatttcgtcgttttcgtgcgacattggtttgtt 20201039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 190 - 253
Target Start/End: Complemental strand, 20203284 - 20203221
Alignment:
Q  190 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgtt 253  Q
    |||||||||||| ||  |||||||||||| |||||||||||| |||||||||| ||||||||||    
T  20203284 attttcacatctattttgttttttattttatgatttcgtcgttttcgtgcgacattggtttgtt 20203221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 131 - 182
Target Start/End: Original strand, 22844040 - 22844091
Alignment:
Q  131 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtt 182  Q
    ||||| ||||||| ||||||||||||||||||||||| ||||||||||||||    
T  22844040 gagggctgatttaaggtcaatttttgacccaaaatcacccctctaactcgtt 22844091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 131 - 186
Target Start/End: Original strand, 43029672 - 43029727
Alignment:
Q  131 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttc 186  Q
    ||||||||||||||| ||| ||||||||||||||||| |||||||||| |||||||    
T  43029672 gaggggtgatttaggatcattttttgacccaaaatcacccctctaacttgtttttc 43029727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 137 - 187
Target Start/End: Original strand, 53426799 - 53426849
Alignment:
Q  137 tgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 187  Q
    ||||||||||||||||||| || |||||||| |||||||||||||||||||    
T  53426799 tgatttagggtcaattttttacgcaaaatcacccctctaactcgtttttct 53426849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 131 - 187
Target Start/End: Complemental strand, 1806585 - 1806529
Alignment:
Q  131 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 187  Q
    |||||||| |||||||||||||||||| || |||||| |||||||| ||||||||||    
T  1806585 gaggggtggtttagggtcaatttttgatcccaaatcacccctctaaatcgtttttct 1806529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 131 - 187
Target Start/End: Original strand, 4019591 - 4019646
Alignment:
Q  131 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 187  Q
    |||||||||||||||||||| ||||||| |||||||| | |||||||||||||||||    
T  4019591 gaggggtgatttagggtcaa-ttttgactcaaaatcacctctctaactcgtttttct 4019646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 210 - 254
Target Start/End: Original strand, 20251747 - 20251791
Alignment:
Q  210 ttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 254  Q
    |||| ||||||||||| ||||||||||||||||||||||||||||    
T  20251747 ttttgttttgtgattttgtcgtcttcgtgcgacgttggtttgttc 20251791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 190 - 249
Target Start/End: Complemental strand, 28995350 - 28995293
Alignment:
Q  190 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtt 249  Q
    |||||||||||| || ||||||  |||||||||||| |||||||||||||||||||||||    
T  28995350 attttcacatctatttcgtttt--attttgtgattttgtcgtcttcgtgcgacgttggtt 28995293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 190 - 242
Target Start/End: Complemental strand, 32089974 - 32089922
Alignment:
Q  190 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgac 242  Q
    |||||||||||| || | ||||||||||||||||||||||||||| |||||||    
T  32089974 attttcacatctatttcattttttattttgtgatttcgtcgtcttagtgcgac 32089922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 131 - 187
Target Start/End: Original strand, 37051613 - 37051669
Alignment:
Q  131 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 187  Q
    ||||| ||||||||||||||||||||||||  ||||| |||||||| ||||||||||    
T  37051613 gagggatgatttagggtcaatttttgaccctgaatcacccctctaaatcgtttttct 37051669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 135 - 187
Target Start/End: Complemental strand, 40462116 - 40462064
Alignment:
Q  135 ggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 187  Q
    |||||||||| ||||| |||||||||||||||| |||||||||| ||||||||    
T  40462116 ggtgatttagagtcaaattttgacccaaaatcacccctctaacttgtttttct 40462064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 190 - 253
Target Start/End: Complemental strand, 25374114 - 25374051
Alignment:
Q  190 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgtt 253  Q
    |||||||||||| || | |||||||||||||||||||  |||||| ||||||| ||||||||||    
T  25374114 attttcacatctatttcattttttattttgtgatttctccgtcttagtgcgactttggtttgtt 25374051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 191 - 254
Target Start/End: Original strand, 27831183 - 27831246
Alignment:
Q  191 ttttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 254  Q
    ||||||||||| || ||||||| ||||||||||||  | ||||| |||||||||||||||||||    
T  27831183 ttttcacatctattccgtttttgattttgtgatttttttgtcttagtgcgacgttggtttgttc 27831246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 210 - 249
Target Start/End: Complemental strand, 33977948 - 33977909
Alignment:
Q  210 ttttattttgtgatttcgtcgtcttcgtgcgacgttggtt 249  Q
    ||||||||||||||||| ||||||||||||||||||||||    
T  33977948 ttttattttgtgatttcatcgtcttcgtgcgacgttggtt 33977909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 190 - 253
Target Start/End: Original strand, 40365296 - 40365359
Alignment:
Q  190 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgtt 253  Q
    |||||||||||| ||  ||||||||||||||||||| ||| ||||  |||||||||||||||||    
T  40365296 attttcacatctattttgttttttattttgtgattttgtcatcttaatgcgacgttggtttgtt 40365359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 190 - 245
Target Start/End: Original strand, 53426868 - 53426923
Alignment:
Q  190 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgtt 245  Q
    |||||||||||| || | |||||| |||||||||||||||||||| ||||||||||    
T  53426868 attttcacatctatttcattttttcttttgtgatttcgtcgtcttagtgcgacgtt 53426923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 131 - 177
Target Start/End: Original strand, 42106100 - 42106146
Alignment:
Q  131 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaac 177  Q
    ||||||||||||||||||||||||||||| ||||||| || ||||||    
T  42106100 gaggggtgatttagggtcaatttttgacctaaaatcacccatctaac 42106146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 131 - 187
Target Start/End: Original strand, 20251640 - 20251697
Alignment:
Q  131 gaggggtgatttagggtcaatttttg-acccaaaatcatccctctaactcgtttttct 187  Q
    |||||||||||||||||| ||||||  ||||||||||| || ||||||||||||||||    
T  20251640 gaggggtgatttagggtcgatttttttacccaaaatcacccttctaactcgtttttct 20251697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 134 - 167
Target Start/End: Complemental strand, 25939598 - 25939565
Alignment:
Q  134 gggtgatttagggtcaatttttgacccaaaatca 167  Q
    ||||||||||||||||||||||||||||||||||    
T  25939598 gggtgatttagggtcaatttttgacccaaaatca 25939565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 134 - 187
Target Start/End: Original strand, 43242803 - 43242856
Alignment:
Q  134 gggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 187  Q
    |||||||||||||||| |||||||| |||||||| || | ||||||||||||||    
T  43242803 gggtgatttagggtcagtttttgacacaaaatcacccatttaactcgtttttct 43242856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 187
Target Start/End: Complemental strand, 7656592 - 7656546
Alignment:
Q  139 atttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 187  Q
    |||||||||||||||||||||| |||||| |||||||||||||||||||    
T  7656592 atttagggtcaatttttgaccc-aaatca-ccctctaactcgtttttct 7656546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 190 - 246
Target Start/End: Original strand, 21585969 - 21586025
Alignment:
Q  190 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttg 246  Q
    |||||||||||| ||  ||||||||||||||||||||||| |||| ||| |||||||    
T  21585969 attttcacatctattttgttttttattttgtgatttcgtcatcttagtgtgacgttg 21586025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 190 - 254
Target Start/End: Complemental strand, 32238040 - 32237976
Alignment:
Q  190 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 254  Q
    ||||||| |||| || | |||||||||||||||||| ||| |||| |||||| ||||||||||||    
T  32238040 attttcatatctatttcattttttattttgtgattttgtcatctttgtgcgatgttggtttgttc 32237976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 190 - 242
Target Start/End: Original strand, 33076382 - 33076434
Alignment:
Q  190 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgac 242  Q
    ||||| |||||| || |||||||||||||||||||| ||||| ||||||||||    
T  33076382 atttttacatctatttcgttttttattttgtgattttgtcgttttcgtgcgac 33076434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 131 - 174
Target Start/End: Complemental strand, 25631735 - 25631692
Alignment:
Q  131 gaggggtgatttagggtcaatttttgacccaaaatcatccctct 174  Q
    |||||||| ||| |||||||||||||||| ||||||||||||||    
T  25631735 gaggggtggttttgggtcaatttttgacctaaaatcatccctct 25631692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 191 - 254
Target Start/End: Complemental strand, 29776732 - 29776670
Alignment:
Q  191 ttttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 254  Q
    ||||||||||| || ||||||| |||||||||||| ||| |||| |||||||||| ||||||||    
T  29776732 ttttcacatctatttcgttttt-attttgtgattttgtcatctttgtgcgacgtttgtttgttc 29776670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 91 - 164
Target Start/End: Complemental strand, 30156468 - 30156399
Alignment:
Q  91 ttctcaaaccctagccgtcattcctttcttcttttcatcggaggggtgatttagggtcaatttttgacccaaaa 164  Q
    ||||||||| ||| || ||| || |||||||||||||   |||||||||||||||||||| |||||||||||||    
T  30156468 ttctcaaactctaaccatcactcatttcttcttttca---gaggggtgatttagggtcaa-ttttgacccaaaa 30156399  T

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Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 140 - 187
Target Start/End: Original strand, 33070152 - 33070199
Alignment:
Q  140 tttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 187  Q
    |||||||||||||||| |||| |||||| |||||||| ||||||||||    
T  33070152 tttagggtcaatttttaaccccaaatcacccctctaaatcgtttttct 33070199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 191 - 254
Target Start/End: Complemental strand, 40462038 - 40461975
Alignment:
Q  191 ttttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 254  Q
    |||| |||||| || || ||||||||||||||||| |||||||| |||||| |||| |||||||    
T  40462038 tttttacatctatttcggtttttattttgtgattttgtcgtcttagtgcgatgttgatttgttc 40461975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 185
Target Start/End: Original strand, 2598076 - 2598126
Alignment:
Q  135 ggtgatttagggtcaatttttgacccaaaatcatccctctaactcgttttt 185  Q
    |||||||||  ||| ||||||||||||||||||  ||||||||||||||||    
T  2598076 ggtgatttaaagtcgatttttgacccaaaatcactcctctaactcgttttt 2598126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 134 - 187
Target Start/End: Original strand, 34766973 - 34767024
Alignment:
Q  134 gggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 187  Q
    |||||||||||||| ||| || |||||||||||| |||||||||||||||||||    
T  34766973 gggtgatttagggttaatatt-gacccaaaatca-ccctctaactcgtttttct 34767024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 132 - 185
Target Start/End: Original strand, 40797023 - 40797075
Alignment:
Q  132 aggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgttttt 185  Q
    |||||||||||||||| || |||||| ||||||||| |||||||||| ||||||    
T  40797023 aggggtgatttagggttaa-ttttgagccaaaatcacccctctaacttgttttt 40797075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 134 - 187
Target Start/End: Complemental strand, 43839638 - 43839587
Alignment:
Q  134 gggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 187  Q
    |||||||||||||||||||||||| ||||| ||| |||||||||||| ||||||    
T  43839638 gggtgatttagggtcaatttttga-ccaaagtca-ccctctaactcgcttttct 43839587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 254
Target Start/End: Complemental strand, 7656527 - 7656495
Alignment:
Q  222 atttcgtcgtcttcgtgcgacgttggtttgttc 254  Q
    |||||| ||||||||||||||||||||||||||    
T  7656527 atttcgccgtcttcgtgcgacgttggtttgttc 7656495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 189 - 253
Target Start/End: Complemental strand, 25939524 - 25939460
Alignment:
Q  189 tattttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgtt 253  Q
    ||||||||||||| ||  ||||||| ||| |||||||||| ||||  ||||||||||| ||||||    
T  25939524 tattttcacatctattctgttttttctttcgtgatttcgttgtctcagtgcgacgttgttttgtt 25939460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 159 - 187
Target Start/End: Complemental strand, 29182705 - 29182677
Alignment:
Q  159 ccaaaatcatccctctaactcgtttttct 187  Q
    |||||||||||||||||||||||||||||    
T  29182705 ccaaaatcatccctctaactcgtttttct 29182677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 185
Target Start/End: Complemental strand, 33978041 - 33977994
Alignment:
Q  135 ggtgatttagggtcaatttttgacccaaaatcatccctctaactcgttttt 185  Q
    ||||||||| |||||||||||||||||||   |||||| ||||||||||||    
T  33978041 ggtgatttaaggtcaatttttgacccaaa---atccctttaactcgttttt 33977994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 210 - 250
Target Start/End: Original strand, 34767075 - 34767115
Alignment:
Q  210 ttttattttgtgatttcgtcgtcttcgtgcgacgttggttt 250  Q
    |||||||||||||| |||||||||| |||||| ||||||||    
T  34767075 ttttattttgtgatctcgtcgtctttgtgcgatgttggttt 34767115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 192 - 232
Target Start/End: Original strand, 50519861 - 50519901
Alignment:
Q  192 tttcacatctgttacgttttttattttgtgatttcgtcgtc 232  Q
    |||||||||| || ||||||||||||| |||||||||||||    
T  50519861 tttcacatctatttcgttttttattttttgatttcgtcgtc 50519901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 190 - 254
Target Start/End: Complemental strand, 12247 - 12183
Alignment:
Q  190 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 254  Q
    ||||||||| || || |||||||||||||||||||||||||||||||||||||||||||||||||    
T  12247 attttcacacctatttcgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 12183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 141 - 187
Target Start/End: Complemental strand, 12318 - 12272
Alignment:
Q  141 ttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 187  Q
    ||||||||||||||||||||||||||||| ||||| |||||| ||||    
T  12318 ttagggtcaatttttgacccaaaatcatctctctagctcgttcttct 12272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 190 - 254
Target Start/End: Complemental strand, 1185 - 1121
Alignment:
Q  190 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 254  Q
    |||||||||||| ||  |||||||||||||||||||||||||||| |||||||||||||||||||    
T  1185 attttcacatctattttgttttttattttgtgatttcgtcgtcttagtgcgacgttggtttgttc 1121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 190 - 254
Target Start/End: Original strand, 36599 - 36663
Alignment:
Q  190 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 254  Q
    |||||||||||| ||   |||||||||||||||||||||||||||||||||||||||||||||||    
T  36599 attttcacatctattttattttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 36663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 47; Significance: 7e-18; HSPs: 2)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 131 - 189
Target Start/End: Complemental strand, 9773 - 9715
Alignment:
Q  131 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttctat 189  Q
    ||||| |||||||||||||||||||||||||||||||  ||||||||||||||||||||    
T  9773 gagggatgatttagggtcaatttttgacccaaaatcactcctctaactcgtttttctat 9715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 249
Target Start/End: Complemental strand, 9674 - 9642
Alignment:
Q  217 ttgtgatttcgtcgtcttcgtgcgacgttggtt 249  Q
    ||||||||||||||||||||| |||||||||||    
T  9674 ttgtgatttcgtcgtcttcgtacgacgttggtt 9642  T

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Target: scaffold0012 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 190 - 254
Target Start/End: Original strand, 244706 - 244770
Alignment:
Q  190 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 254  Q
    |||||||||||| || ||||||||| |||||||||| |||||||||||||||| |||||||||||    
T  244706 attttcacatctatttcgttttttagtttgtgattttgtcgtcttcgtgcgaccttggtttgttc 244770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0665 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0665
Description:

Target: scaffold0665; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 207 - 254
Target Start/End: Complemental strand, 1154 - 1107
Alignment:
Q  207 gttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 254  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||||    
T  1154 gttttttattttgtgatttcgtcatcttcgtgtgacgttggtttgttc 1107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0665; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 174
Target Start/End: Complemental strand, 1213 - 1174
Alignment:
Q  134 gggtgatttagggtcaatttttgacccaaaatcatccctct 174  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  1213 gggtgatttagg-tcaatttttgacccaaaatcatccctct 1174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 191 - 254
Target Start/End: Complemental strand, 10354 - 10291
Alignment:
Q  191 ttttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 254  Q
    ||||||||||| ||  ||||||||||||||||||| || ||||| |||||||||||||||||||    
T  10354 ttttcacatctatttagttttttattttgtgatttggttgtcttagtgcgacgttggtttgttc 10291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1294 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold1294
Description:

Target: scaffold1294; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 136 - 184
Target Start/End: Original strand, 774 - 822
Alignment:
Q  136 gtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttt 184  Q
    |||||||| ||||||||||||||| ||||||||| ||||||||||||||    
T  774 gtgatttaaggtcaatttttgaccaaaaatcatcactctaactcgtttt 822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0340 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0340
Description:

Target: scaffold0340; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 137 - 189
Target Start/End: Complemental strand, 11896 - 11844
Alignment:
Q  137 tgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttctat 189  Q
    |||||||| ||||||||||||||||||||||  | ||||||||||||||||||    
T  11896 tgatttagtgtcaatttttgacccaaaatcactcatctaactcgtttttctat 11844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 190 - 254
Target Start/End: Complemental strand, 137102 - 137038
Alignment:
Q  190 attttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 254  Q
    ||||| |||||| || |||||||| |||||||||||||||||||| || |||||||| |||||||    
T  137102 attttaacatctatttcgttttttcttttgtgatttcgtcgtcttagtacgacgttgttttgttc 137038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 34; Significance: 0.0000000004; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 134 - 187
Target Start/End: Original strand, 11011 - 11064
Alignment:
Q  134 gggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 187  Q
    ||||||||| |||||||||||||||  ||||||| ||||||||||| |||||||    
T  11011 gggtgattttgggtcaatttttgacttaaaatcacccctctaactcatttttct 11064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 209 - 254
Target Start/End: Original strand, 11107 - 11148
Alignment:
Q  209 tttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 254  Q
    ||||||||||||||||||||    ||||||||||||||||||||||    
T  11107 tttttattttgtgatttcgt----ttcgtgcgacgttggtttgttc 11148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0536 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0536
Description:

Target: scaffold0536; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 91 - 154
Target Start/End: Original strand, 2839 - 2902
Alignment:
Q  91 ttctcaaaccctagccgtcattcctttcttcttttcatcggaggggtgatttagggtcaatttt 154  Q
    |||||||||||||| |||||  ||||||||||| |  |  ||||||||||||||||||||||||    
T  2839 ttctcaaaccctagtcgtcacccctttcttcttcttgttagaggggtgatttagggtcaatttt 2902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0627 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0627
Description:

Target: scaffold0627; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 208 - 254
Target Start/End: Complemental strand, 6811 - 6765
Alignment:
Q  208 ttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttc 254  Q
    |||||||||||||||||| || ||||| |||| ||||||||||||||    
T  6811 ttttttattttgtgattttgttgtcttagtgcaacgttggtttgttc 6765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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