View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13113_low_7 (Length: 262)
Name: NF13113_low_7
Description: NF13113
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13113_low_7 |
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Alignment Details
Target: chr3 (Bit Score: 96; Significance: 4e-47; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 121 - 237
Target Start/End: Complemental strand, 50295222 - 50295102
Alignment:
| Q |
121 |
ctaacccaaacaatagccaaataagccacatcaacatgctaat----aaccaaataaggcacttctgcaatccaattagcatttgggttgaaaccattca |
216 |
Q |
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| T |
50295222 |
ctaacccaaacaatagccaaataagccacatcaacatgctaattaataaccaaataaggcacttctacaatccaattagcatttgggttgaaaccattca |
50295123 |
T |
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| Q |
217 |
cgtgccatcaccaaataatta |
237 |
Q |
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||||||| ||||||||||||| |
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| T |
50295122 |
cgtgccaccaccaaataatta |
50295102 |
T |
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