View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13114_high_30 (Length: 287)
Name: NF13114_high_30
Description: NF13114
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13114_high_30 |
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Alignment Details
Target: chr5 (Bit Score: 271; Significance: 1e-151; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 1 - 279
Target Start/End: Complemental strand, 40130346 - 40130068
Alignment:
| Q |
1 |
tattttcaaacatgagtaaatcctcactttggtcctcgagattataaacatcgaacataaagataaatccaatgtttttaaaagaaaatcaggaaagaaa |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40130346 |
tattttcaaacatgagtaaatcctcactttggtcctcgagtttataaacgtcgaacataaagataaatccaatgtttttaaaagaaaatcaggaaagaaa |
40130247 |
T |
|
| Q |
101 |
aaagggattatctcaactgctttgtttaaataacataatacttgtatgaatgttacagaagtattgaaggaaatcaattttcaggctttattcctgaaga |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40130246 |
aaagggattatctcaactgctttgtttaaataacataatacttgtatgaatgttacagaagtattgaaggaaatcaattttcaggctttattcctgaaga |
40130147 |
T |
|
| Q |
201 |
catagggaagctgatcaacttagaaaaactgtaattcttctgaaactcccgtcttcttattgtaatcatagtctctgct |
279 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40130146 |
catagggaagctgatcaacttagaaaaactgtaattcttctgaaactcccgtcttcttattgtaatcatagtctctgct |
40130068 |
T |
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