View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13114_low_26 (Length: 321)
Name: NF13114_low_26
Description: NF13114
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13114_low_26 |
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Alignment Details
Target: chr1 (Bit Score: 275; Significance: 1e-154; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 275; E-Value: 1e-154
Query Start/End: Original strand, 1 - 303
Target Start/End: Original strand, 32103683 - 32103985
Alignment:
| Q |
1 |
taatcatatctaaaacacctttcaaaaagtaggaaaaaagtctgaaacaggtaaaattggtttctgttgtttcatgacaagtaaatagacaatgaaaaat |
100 |
Q |
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| T |
32103683 |
taatcatatctaaaacacctttccaaaagtaggaaaaaagtctgaaacaggtaaaattggtttctgttgtttcatgacaagtaaatagacaacgaaaaat |
32103782 |
T |
|
| Q |
101 |
caagagagaaaagatggtaagctgaactttcaatgaagaaagtatatagaatagaagacttgcaggtatgtgtgtatggcttgtaggtgagactaaggaa |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
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| T |
32103783 |
caagagagaaaagatggtaagctgaactttcaatgaagaaagtatatagaatagaagacttgcaggtatgtgtgtatggcttgtaggtgagactaagaaa |
32103882 |
T |
|
| Q |
201 |
aagctttaactttaaaagggttaagactttgaggtggatacgggagagattcaataaatactactatatgtgtttgtataagatcatatatagaataagg |
300 |
Q |
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|| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
32103883 |
gaggtttaactttaaaagggttatgactttgaggtggatacgggagagattcaataaatactactatatgtgtttgtataagatcatatatagaagaagg |
32103982 |
T |
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| Q |
301 |
ttt |
303 |
Q |
| |
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||| |
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| T |
32103983 |
ttt |
32103985 |
T |
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