View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF13114_low_8 (Length: 503)
Name: NF13114_low_8
Description: NF13114
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13114_low_8 |
 | |
|
Alignment Details
Target: chr5 (Bit Score: 454; Significance: 0; HSPs: 16)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 454; E-Value: 0
Query Start/End: Original strand, 9 - 486
Target Start/End: Original strand, 39472176 - 39472653
Alignment:
| Q |
9 |
acatcatcaaccttccagaatgttctcttgccccaaacacagatcaaggttcctctatgactgcgctcctcgaagctcagaaaccaaacgtcaaacaagt |
108 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
39472176 |
acatcatcaaccttccagaatgttctcttgccccaaacacagatcaaggtccctctatgactgcgctcctcgaagctcagaaaccaaacgtcaaacaagt |
39472275 |
T |
|
| Q |
109 |
tgtatctaacctcattaccagatcagaaaatggagtccttgccgcttttgttgttgacatgttctgcacaaacatgattgatgttgccaaagagttctct |
208 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
39472276 |
agtatctaacctcattaccagatcagaaaatggagtccttgccgcttttgttgttgacatgttctgcacaaacatgattgatgttgccaaagagttctct |
39472375 |
T |
|
| Q |
209 |
gtccctacgcttgtcttcttcacttccggtgttgcgttccttggattgagttttcatctttacactcttcgtcaacgagacaatgtctattcaactaagt |
308 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
39472376 |
gtccctacgcttgtcttcttcacttccggtgttgcgttccttggattgagttttcatctttacactcttcgtcaacgagacaatgtctattcaactaagt |
39472475 |
T |
|
| Q |
309 |
tgttacaactcactgacttggctgtcccgagtttcactaacttggttccaacaacagcgttgcccagtgcggtgctaagcaaagaatgggagtcgtttat |
408 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||| ||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
39472476 |
tgttacaactcactgacttggctgtcccgagtttcgctaacttggttccaacaaaagcattgcccagtgctgtgctaagcaaagaatgggagtcgtttat |
39472575 |
T |
|
| Q |
409 |
gatgggctattggaaaggcctcaagaacgctgatggctttatagtaaattcatttgaagagctagaatcccacgcagt |
486 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
39472576 |
gatgggctattggaaaggcctcaagaacgctgatggctttatagtaaattcatttgaagagctagaatcccacgcagt |
39472653 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 158 - 486
Target Start/End: Complemental strand, 39464435 - 39464107
Alignment:
| Q |
158 |
gttgttgacatgttctgcacaaacatgattgatgttgccaaagagttctctgtccctacgcttgtcttcttcacttccggtgttgcgttccttggattga |
257 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||||| || || || |||||| || |||| ||||||||||| ||||||| |||||||| |||| |
|
|
| T |
39464435 |
gttgttgacatgttctgcaccaacatgattgatgttgccaaggaattttccgtccctgcgtttgtgttcttcacttcgagtgttgctttccttggtttga |
39464336 |
T |
|
| Q |
258 |
gttttcatctttacactcttcgtcaacgagacaatgtctattcaactaagttgttacaactcactgacttggctgtcccgagtttcactaacttggttcc |
357 |
Q |
| |
|
| ||||| || ||||| | | |||||||||| ||| |||||||| || || ||||| ||||| ||| | ||||||||||| |||||| ||||| |
|
|
| T |
39464335 |
atcttcatattcacactttgtttgaacgagacaacgtcgattcaactcagctggagcaactgactgaattgtccctcccgagtttcgctaactccgttcc |
39464236 |
T |
|
| Q |
358 |
aacaacagcgttgcccagtgcggtgctaagcaaagaatgggagtcgtttatgatgggctattggaaaggcctcaagaacgctgatggctttatagtaaat |
457 |
Q |
| |
|
|||| | ||||||||||||| || || |||| |||| ||||||||| | ||| ||||| |||||||||||||| |||||||| |||||||||||| |
|
|
| T |
39464235 |
tacaaaatcgttgcccagtgcagtaatacgcaaggaatccgagtcgtttttcatgagctatgcaaaaggcctcaagaaggctgatggttttatagtaaat |
39464136 |
T |
|
| Q |
458 |
tcatttgaagagctagaatcccacgcagt |
486 |
Q |
| |
|
||||||||||||||||||||||| ||||| |
|
|
| T |
39464135 |
tcatttgaagagctagaatcccatgcagt |
39464107 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 10 - 257
Target Start/End: Original strand, 39454780 - 39455027
Alignment:
| Q |
10 |
catcatcaaccttccagaatgttctcttgccccaaacacagatcaaggttcctctatgactgcgctcctcgaagctcagaaaccaaacgtcaaacaagtt |
109 |
Q |
| |
|
||||||||||||||||||||| |||||| |||||||||| ||| || |||||| ||| | || | ||| |||||||||||||||||||||||||||| |
|
|
| T |
39454780 |
catcatcaaccttccagaatgctctcttcccccaaacactaatccagtttcctccatgtccgctcaccttgaagctcagaaaccaaacgtcaaacaagcc |
39454879 |
T |
|
| Q |
110 |
gtatctaacctcattaccagatcagaaaatggagtccttgccgcttttgttgttgacatgttctgcacaaacatgattgatgttgccaaagagttctctg |
209 |
Q |
| |
|
||||||||||||||||| | || || ||||||||| || ||||| ||||||||||||| ||||||| ||||||||||||||||||||||||||| |
|
|
| T |
39454880 |
gtatctaacctcattactggtgaagcaagtggagtcctcgcagctttcgttgttgacatgtcctgcacagccatgattgatgttgccaaagagttctcca |
39454979 |
T |
|
| Q |
210 |
tccctacgcttgtcttcttcacttccggtgttgcgttccttggattga |
257 |
Q |
| |
|
||||||| || ||||||||||||||| |||| || |||||||| |||| |
|
|
| T |
39454980 |
tccctacactcgtcttcttcacttccagtgtagctttccttggtttga |
39455027 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 9 - 300
Target Start/End: Original strand, 39475646 - 39475943
Alignment:
| Q |
9 |
acatcatcaaccttccagaatgttctcttgccccaaacacagatcaaggttcctct---atgactgcgctcctcgaagctcagaaaccaaacgtcaaaca |
105 |
Q |
| |
|
|||||||||||||||||||| ||||||| |||||||||| |||| ||||| |||| ||||| || |||||||||||||||||||||||||| ||||| |
|
|
| T |
39475646 |
acatcatcaaccttccagaagtttctcttcccccaaacaccgatccaggtttctcttccatgacagctctcctcgaagctcagaaaccaaacgtaaaaca |
39475745 |
T |
|
| Q |
106 |
agttgtatctaacctcattaccagatcag---aaaatggagtccttgccgcttttgttgttgacatgttctgcacaaacatgattgatgttgccaaagag |
202 |
Q |
| |
|
|| ||| || ||||||| ||| ||| || || ||||| ||| ||||| || |||||||||||||||||||| | |||||| |||||||||| ||| |
|
|
| T |
39475746 |
agctgtctccaacctcactactagagaaggacaacatggacacctcgccgccttcgttgttgacatgttctgcaccaccatgatcaatgttgccaatgag |
39475845 |
T |
|
| Q |
203 |
ttctctgtccctacgcttgtcttcttcacttccggtgttgcgttccttggattgagttttcatctttacactcttcgtcaacgagacaatgtctattc |
300 |
Q |
| |
|
||| |||||||||||| || ||||||||||| |||||||| | |||||| |||| | || | ||||||||||||||| |||||||||||||| |||| |
|
|
| T |
39475846 |
ttcaatgtccctacgctcgttttcttcacttctggtgttgcttcccttggtttgaatctttacctttacactcttcgtgaacgagacaatgtcgattc |
39475943 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 74 - 478
Target Start/End: Complemental strand, 39458258 - 39457853
Alignment:
| Q |
74 |
ctcctcgaagctcagaaaccaaacgtcaaacaagttgtatctaacctcattaccagatcagaaaatggagtccttgccgcttttgttgttgacatgttct |
173 |
Q |
| |
|
|||||| ||||||||||||||||||||||| ||| || || ||||||| || | |||||||||||||||| || || || ||||||||||||||| |
|
|
| T |
39458258 |
ctcctcaaagctcagaaaccaaacgtcaaaaaagccgtctccaacctcactaaagcaccagaaaatggagtcctagctgcattcattgttgacatgttct |
39458159 |
T |
|
| Q |
174 |
gcacaaacatgattgatgttgccaaagagttctctgtccctacgcttgtcttcttcacttccggtgttgcgttccttggattg-agttttcatctttaca |
272 |
Q |
| |
|
|||| | |||||||||||||| ||||| || |||||||||||||| ||||||||||||||||||||||| |||||||| ||| | | ||||| || | | |
|
|
| T |
39458158 |
gcaccaccatgattgatgttgtaaaagaattttctgtccctacgctcgtcttcttcacttccggtgttgctttccttggtttgaaatcttcatattcata |
39458059 |
T |
|
| Q |
273 |
ctcttcgtcaacgagacaatgtctattcaactaagttgttacaactcactgacttggctgtcccgagtttcactaacttggttccaacaacagcgttgcc |
372 |
Q |
| |
|
| | | |||||||||| || |||| ||| ||||| | || | ||||| ||||| ||| ||||| |||||| ||||| ||| | ||||| |
|
|
| T |
39458058 |
atatgtttgaacgagacaacgttgattccactcagttgctgcagcagactgagttggccatccgaggtttcgctaactcagttccttcaaacactttgcc |
39457959 |
T |
|
| Q |
373 |
cagtgcggtgctaagcaaagaatgggagtcgtttatgatgggctattggaaaggcctcaagaacgctgatggctttatagtaaattcatttgaagagcta |
472 |
Q |
| |
|
|||| | |||||| |||| ||||||||||| || | ||| ||||| |||||| |||||||| ||||||| | |||| ||||||||||||||||||||| |
|
|
| T |
39457958 |
cagttcagtgctacgcaaggaatgggagtccttcttcatgagctatgcgaaaggtctcaagaatgctgatgccattattgtaaattcatttgaagagcta |
39457859 |
T |
|
| Q |
473 |
gaatcc |
478 |
Q |
| |
|
|||||| |
|
|
| T |
39457858 |
gaatcc |
39457853 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 9 - 483
Target Start/End: Original strand, 39451140 - 39451620
Alignment:
| Q |
9 |
acatcatcaaccttccagaatgttctcttgccccaaacacagatcaaggttcctct---atgactgcgctcctcgaagctcagaaaccaaacgtcaaaca |
105 |
Q |
| |
|
|||||||||||||||||||| ||||||| | |||||||| ||| ||||| | || ||| |||| ||||||||||||||||||||||| |||||||| |
|
|
| T |
39451140 |
acatcatcaaccttccagaagtttctcttcctccaaacaccaatccaggtttcgcttccatgcctgctctcctcgaagctcagaaaccaaatgtcaaaca |
39451239 |
T |
|
| Q |
106 |
agttgtatctaacctcattaccagatcag---aaaatggagtccttgccgcttttgttgttgacatgttctgcacaaacatgattgatgttgccaaagag |
202 |
Q |
| |
|
|| || |||||||||| ||| || || ||||||||||||| ||| | | |||||||||||||||||||| | |||||||||| |||||||||| |
|
|
| T |
39451240 |
agccgtttctaacctcactactggaggaggagaaaatggagtcctcgccaccatcgttgttgacatgttctgcaccaccatgattgatattgccaaagaa |
39451339 |
T |
|
| Q |
203 |
ttctctgtccctacgcttgtcttcttcacttccggtgttgcgttccttggattgagttttcatctttacactcttcgtcaacgagacaatgtctattcaa |
302 |
Q |
| |
|
|| || || |||| ||| |||||||||||||| || ||||| | |||||| |||| | ||||| || | || || ||| |||||||||| || |||||| |
|
|
| T |
39451340 |
ttttcagttcctatgctcgtcttcttcacttctggcgttgcttcccttggtttgaatcttcatattcataccctccgtgaacgagacaacgttgattcaa |
39451439 |
T |
|
| Q |
303 |
ctaagttgttacaactcactgacttggctgtcccgagtttcactaacttggttccaacaacagcgttgcccagtgcggtgctaagcaaagaatgggagtc |
402 |
Q |
| |
|
|| ||||| || | | || || || |||||| |||| || ||||| |||| ||| | ||||| || | || |||||||| |||||||| | |
|
|
| T |
39451440 |
ctcagttgcagcagcagaaagagttagccatcccgactttcgctcacttgtttccttcaagctcattgcctggttccgtcctaagcaaggaatgggaacc |
39451539 |
T |
|
| Q |
403 |
gtttatgatgggctattggaaaggcctcaagaacgctgatggctttatagtaaattcatttgaagagctagaatcccacgc |
483 |
Q |
| |
|
|||| | ||| ||| ||||||||||||| || |||||| ||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
39451540 |
gtttttcatgagcttcatagaaggcctcaagaatgccgatggcattatagtaaattcatttgaagagctagaatcacacgc |
39451620 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 8 - 252
Target Start/End: Original strand, 39460389 - 39460636
Alignment:
| Q |
8 |
gacatcatcaaccttccagaatgttctcttgccccaaacacagatcaaggttcctctatgactgcgctcctcgaagctcagaaaccaaacgtcaaacaag |
107 |
Q |
| |
|
||||||||||||||||||||| ||||||| ||||||||| || | | |||| |||| || ||||||||||||||||| ||||||||||||||| |
|
|
| T |
39460389 |
gacatcatcaaccttccagaagtttctcttcccccaaacatcgaaccaacttccagaatgatggctttcctcgaagctcagaaatcaaacgtcaaacaag |
39460488 |
T |
|
| Q |
108 |
ttgtatctaacctcattaccagatcagaaaa---tggagtccttgccgcttttgttgttgacatgttctgcacaaacatgattgatgttgccaaagagtt |
204 |
Q |
| |
|
|||||||| |||| ||| | |||||| |||| ||| | || ||||||||||||||||||||||| || ||||||||| |||||||||| || |
|
|
| T |
39460489 |
ccgtatctaatctcactactactagagaaaaacatggaaccctcacagcctttgttgttgacatgttctgcactaaaatgattgatattgccaaagaatt |
39460588 |
T |
|
| Q |
205 |
ctctgtccctacgcttgtcttcttcacttccggtgttgcgttccttgg |
252 |
Q |
| |
|
|| ||||||||||||||||||||||||||||||||||| | |||||| |
|
|
| T |
39460589 |
ttcagtccctacgcttgtcttcttcacttccggtgttgcttcccttgg |
39460636 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 12 - 310
Target Start/End: Original strand, 39486608 - 39486912
Alignment:
| Q |
12 |
tcatcaaccttccagaatgttctcttgccccaaacacagatcaaggttcctctatgactgcgctcctcgaagctcagaaaccaaacgtcaaacaagttgt |
111 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||| || | | ||| |||| || ||||| |||||||||||||||||||||||||||| ||| |
|
|
| T |
39486608 |
tcatcaaccttccagaatgttctcttcccccaaacaccgaaccacgttttgtcatgaacgctctccttgaagctcagaaaccaaacgtcaaacaagctgt |
39486707 |
T |
|
| Q |
112 |
atctaacctcattaccagatcagaaaa------tggagtccttgccgcttttgttgttgacatgttctgcacaaacatgattgatgttgccaaagagttc |
205 |
Q |
| |
|
||| ||||||| ||| ||| || | | |||| ||||||||| || |||||||||||||||||||| | |||||||||| |||||||||| || |
|
|
| T |
39486708 |
atccaacctcactactagagaaggacaaccacctggacaccttgccgccttcgttgttgacatgttctgcaccaccatgattgatattgccaaagaattt |
39486807 |
T |
|
| Q |
206 |
tctgtccctacgcttgtcttcttcacttccggtgttgcgttccttggattgagttttcatctttacactcttcgtcaacgagacaatgtctattcaacta |
305 |
Q |
| |
|
|| ||||| |||| |||||||||||||||||||||| || ||||| |||| | |||||| ||||||| | |||||||||| || |||||||| |
|
|
| T |
39486808 |
tccatccctgcgctcatcttcttcacttccggtgttgcttttcttggtttgatgctccatcttcacactctgtttgaacgagacaacatcgattcaactc |
39486907 |
T |
|
| Q |
306 |
agttg |
310 |
Q |
| |
|
||||| |
|
|
| T |
39486908 |
agttg |
39486912 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 14 - 292
Target Start/End: Original strand, 39483405 - 39483686
Alignment:
| Q |
14 |
atcaaccttccagaatgttctcttgccccaaacacagatcaaggttcctctatgactgcgctcctcgaagctcagaaaccaaacgtcaaacaagttgtat |
113 |
Q |
| |
|
||||||||||||||||||| |||| |||||||| |||| || ||| | || | || ||||| |||||||||||||||||| | | ||||| ||| | |
|
|
| T |
39483405 |
atcaaccttccagaatgttatcttcccccaaacttcgatctagtttctgccatcaacgctctccttgaagctcagaaaccaaacataatacaagctgtct |
39483504 |
T |
|
| Q |
114 |
ctaacctcattaccagatcag---aaaatggagtccttgccgcttttgttgttgacatgttctgcacaaacatgattgatgttgccaaagagttctctgt |
210 |
Q |
| |
|
| ||||||| ||| ||| || || ||||| ||| |||| || |||||||||||||||||||| | |||||||||||||||||| |||||| ||| |
|
|
| T |
39483505 |
ccaacctcactactagagaaggacaacatggacacctctccgccttcgttgttgacatgttctgcaccaccatgattgatgttgccaatgagttcaatgt |
39483604 |
T |
|
| Q |
211 |
ccctacgcttgtcttcttcacttccggtgttgcgttccttggattgagttttcatctttacactcttcgtcaacgagacaat |
292 |
Q |
| |
|
||||||||| || |||| ||||| | ||||||| | |||||| |||| | || ||||| ||||||||||| ||||||||||| |
|
|
| T |
39483605 |
ccctacgctcgttttctacactttcagtgttgcttcccttggtttgaatctttatcttcacactcttcgtgaacgagacaat |
39483686 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 12 - 257
Target Start/End: Complemental strand, 39470783 - 39470538
Alignment:
| Q |
12 |
tcatcaaccttccagaatgttctcttgccccaaacacagatcaaggttcctctatgactgcgctcctcgaagctcagaaaccaaacgtcaaacaagttgt |
111 |
Q |
| |
|
||||||||||||||||| |||| || ||||| | | |||| |||||| ||||| || |||||||||||||| ||| ||||||||||||||| | | |
|
|
| T |
39470783 |
tcatcaaccttccagaagtttctgttctcccaacctctgatccaggttcggatatgaacgctctcctcgaagctcataaagcaaacgtcaaacaagctat |
39470684 |
T |
|
| Q |
112 |
atctaacctcattaccagatcagaaaatggagtccttgccgcttttgttgttgacatgttctgcacaaacatgattgatgttgccaaagagttctctgtc |
211 |
Q |
| |
|
|| ||||||| ||| || | || ||||| ||| |||||| | ||||||||||||||||||||||||||||||||||||||||||| || || || |
|
|
| T |
39470683 |
ctccaacctcactactggagaacaacatggacccctcgccgctgtcattgttgacatgttctgcacaaacatgattgatgttgccaaagaattttccctc |
39470584 |
T |
|
| Q |
212 |
cctacgcttgtcttcttcacttccggtgttgcgttccttggattga |
257 |
Q |
| |
|
||| || |||| || ||||||||||| |||| |||||||| |||| |
|
|
| T |
39470583 |
cctgcgtttgtgttgttcacttccggcattgctttccttggtttga |
39470538 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 158 - 257
Target Start/End: Complemental strand, 43312414 - 43312315
Alignment:
| Q |
158 |
gttgttgacatgttctgcacaaacatgattgatgttgccaaagagttctctgtccctacgcttgtcttcttcacttccggtgttgcgttccttggattga |
257 |
Q |
| |
|
|||||||||||||||||||| | |||||||||||| || || || || ||||||| | || |||| |||||||||||||||||| |||||||| |||| |
|
|
| T |
43312414 |
gttgttgacatgttctgcaccaccatgattgatgtagctaatgactttggtgtcccttccctcgtctacttcacttccggtgttgctttccttggtttga |
43312315 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 425 - 486
Target Start/End: Original strand, 39460809 - 39460870
Alignment:
| Q |
425 |
ggcctcaagaacgctgatggctttatagtaaattcatttgaagagctagaatcccacgcagt |
486 |
Q |
| |
|
||||||||||| || |||| |||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
39460809 |
ggcctcaagaaagcaaatggtattatagtaaattcatttgaagagctagaatcccatgcagt |
39460870 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 12 - 121
Target Start/End: Complemental strand, 39464560 - 39464451
Alignment:
| Q |
12 |
tcatcaaccttccagaatgttctcttgccccaaacacagatcaaggttcctctatgactgcgctcctcgaagctcagaaaccaaacgtcaaacaagttgt |
111 |
Q |
| |
|
||||||||||||||||| ||||||| ||| || | | |||| ||||||| |||||| || ||||| || ||||| ||||||||||||||||||| || |
|
|
| T |
39464560 |
tcatcaaccttccagaagtttctcttccccaaacctctgatccaggttccgctatgaacgctctccttgatgctcacaaaccaaacgtcaaacaagccgt |
39464461 |
T |
|
| Q |
112 |
atctaacctc |
121 |
Q |
| |
|
||||||||| |
|
|
| T |
39464460 |
ctctaacctc |
39464451 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 422 - 478
Target Start/End: Complemental strand, 39470373 - 39470317
Alignment:
| Q |
422 |
aaaggcctcaagaacgctgatggctttatagtaaattcatttgaagagctagaatcc |
478 |
Q |
| |
|
|||||||||||||| || |||||| |||| || |||||||||||||||||||||||| |
|
|
| T |
39470373 |
aaaggcctcaagaatgccgatggcattattgtcaattcatttgaagagctagaatcc |
39470317 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 424 - 483
Target Start/End: Original strand, 39483818 - 39483877
Alignment:
| Q |
424 |
aggcctcaagaacgctgatggctttatagtaaattcatttgaagagctagaatcccacgc |
483 |
Q |
| |
|
|||||||||||| | ||||| ||||||||||||||||| ||||||||||||| ||||| |
|
|
| T |
39483818 |
aggcctcaagaaagtaaatggcattatagtaaattcattttaagagctagaatctcacgc |
39483877 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 424 - 477
Target Start/End: Original strand, 39476067 - 39476120
Alignment:
| Q |
424 |
aggcctcaagaacgctgatggctttatagtaaattcatttgaagagctagaatc |
477 |
Q |
| |
|
|||||||||||| | ||||| |||||||||| |||||||||||||||||||| |
|
|
| T |
39476067 |
aggcctcaagaaagtaaatggcattatagtaaactcatttgaagagctagaatc |
39476120 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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