View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13117_high_5 (Length: 230)
Name: NF13117_high_5
Description: NF13117
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13117_high_5 |
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Alignment Details
Target: chr4 (Bit Score: 190; Significance: 1e-103; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 19 - 212
Target Start/End: Original strand, 49593619 - 49593812
Alignment:
| Q |
19 |
atactaaaaattgttacatattatatcacactatgataatgaagagtgcatgactaactggtacatattcttcgttttttgtgatgatttcaggttcaga |
118 |
Q |
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| T |
49593619 |
atactaaaaaatgttacatattatatcacactatgataatgaagagtgcatgactaactggtacatattcttcgttttttgtgatgatttcaggttcaga |
49593718 |
T |
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| Q |
119 |
gtagttgttgttacttgtttgtagggtgtgcgaattattattttttatttgaagatgagcttgtttgacatggatttgagtgtagtgatcccat |
212 |
Q |
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| T |
49593719 |
gtagttgttgttacttgtttgtagggtgtgcgaattattattttttatttgaagatgagcttgtttgacatggatttgagtgtagtgatcccat |
49593812 |
T |
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