View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13118_high_14 (Length: 261)
Name: NF13118_high_14
Description: NF13118
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13118_high_14 |
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Alignment Details
Target: chr1 (Bit Score: 218; Significance: 1e-120; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 6 - 247
Target Start/End: Complemental strand, 40810912 - 40810671
Alignment:
| Q |
6 |
agcagcagagatgtcaaagaaacatacattattgcacaaaggcataacaatcaagccaggagaatactttctaagcagatgagaagtggcattcaaaaag |
105 |
Q |
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|||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40810912 |
agcaccagaaatgtcaaagaaacatacattattgcacaaaggcataacaatcaagccaggagaatactttctaagcagatgagaagtggcattcaaaaag |
40810813 |
T |
|
| Q |
106 |
ataaacaactcaagataactactgaaatacacgcatcacaaccaagtgcatcacgttaagaccctagtaacacaattacttctctgcagaccacaccaga |
205 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
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| T |
40810812 |
ataaacaactcaagataactactgaaatacacgcatcacaaccaagtgcatcacgttaagaccctagtaacacaattccttctctgcagaccacaccaga |
40810713 |
T |
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| Q |
206 |
aacaattagattcacattacaattctgatgtgcatccttttg |
247 |
Q |
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||||||||||| ||| | |||||||||||||||||||||||| |
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| T |
40810712 |
aacaattagatgcacttgacaattctgatgtgcatccttttg |
40810671 |
T |
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