View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13119_high_41 (Length: 292)
Name: NF13119_high_41
Description: NF13119
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13119_high_41 |
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Alignment Details
Target: chr2 (Bit Score: 223; Significance: 1e-123; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 26 - 276
Target Start/End: Original strand, 37714845 - 37715095
Alignment:
| Q |
26 |
ttataataactttgcttacattaaatgtattttgatgcaatgaaacactttaaatttaaaatgtcaaaccataaattattaccaagcttgtggccaattt |
125 |
Q |
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| T |
37714845 |
ttataataactttgcttacattaaatgtattttgatgcaatgaaacactttaaatttaaaatgtcaaaccataaattattaccaagcttgtggccaattt |
37714944 |
T |
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| Q |
126 |
tctttctccgtatataagcaaacaccaccgtacatgttaagataataatgactatacaaattactgcaagagttaatggctttggatagtgttttgatcc |
225 |
Q |
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| T |
37714945 |
tctttctccgtatataagcaaacaccaccgtacatgttaagataataatgactatacaaattactgcaagagttaatggctttggatagtgtttggatcc |
37715044 |
T |
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| Q |
226 |
tgtccaagnnnnnnnntgaaatacagaaaatatataagagggcatatatat |
276 |
Q |
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| T |
37715045 |
tgtccaagaaaaaaaatgaaatacagaaaatatataagagggcatatatat |
37715095 |
T |
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