View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13119_high_55 (Length: 250)
Name: NF13119_high_55
Description: NF13119
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13119_high_55 |
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Alignment Details
Target: chr2 (Bit Score: 235; Significance: 1e-130; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 42822803 - 42823045
Alignment:
| Q |
1 |
aggtcttcaaattggcctcttcataacaaatttctacaaattaaaattggatctatttcttgtcactttcaaaagaagcagtgtaaaacactccaaagat |
100 |
Q |
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| T |
42822803 |
aggtcttcaaattggcctcttcataacaaatttctacaaattaaaattggatctatttcttgtcactttcaaaagaagcagtgtaaaacactccaaagat |
42822902 |
T |
|
| Q |
101 |
gtaccataataaatagtaacgtaactaaaatctgctattcattgaatatgagaatatcttggacacccaaattaaatgcaatacaaaatgaatggcccaa |
200 |
Q |
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||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42822903 |
gtaccataataaatactaacgtaactaaaatctgatattcattgaatatgagaatatcttggacacccaaattaaatgcaatacaaaatgaatggcccaa |
42823002 |
T |
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| Q |
201 |
attagatagatattggtaaagaggacttatgccttatctgtgc |
243 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42823003 |
attagatagatattggtaaagaggacttatgccttatctgtgc |
42823045 |
T |
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