View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13122_high_1 (Length: 632)
Name: NF13122_high_1
Description: NF13122
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13122_high_1 |
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Alignment Details
Target: chr3 (Bit Score: 564; Significance: 0; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 564; E-Value: 0
Query Start/End: Original strand, 1 - 572
Target Start/End: Original strand, 47036105 - 47036676
Alignment:
| Q |
1 |
attctccaaacattggaccaaaagctattagcctccatgttattaaacctgcaaagggacttgtaacttgtaagtggtagcgacaatatcccagggtaac |
100 |
Q |
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| T |
47036105 |
attctccaaacattggaccaaaagctattagcctccatgttattaaacctgcaaagggacttgtaacttgtaagtggtagcgacaatatcccagggtaac |
47036204 |
T |
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| Q |
101 |
acacaaatcagctcttaaattgatatcagattgcactaggctccttatgtcaaggactatatcatctaacaagtggctatttatttaatagagataaatt |
200 |
Q |
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| T |
47036205 |
acacaaatcagctcctaaattgatatcagattgcactaggctccttatgtcaaggactatatcatctaacaagtggctatttatttaatagagataaatt |
47036304 |
T |
|
| Q |
201 |
ccattgctcattactatctattaagtcttctactttcatattactcaaactatttgggacatgtcctttgctatccattaatctcacacccgtttcatca |
300 |
Q |
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| T |
47036305 |
ccattgctcattactatctattaagtcttctactttcatattactcaaactatttgggacatgtcctttgctatccattaatctcacacccgtttcatca |
47036404 |
T |
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| Q |
301 |
aacaagcttgtgattcataacatcaagcccctttgtgccaagacctcccatatttctagggagagtaaatttgtcccactttactgcatcagaaaattgt |
400 |
Q |
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| T |
47036405 |
aacaagcttgtgattcataacatcaagcccctttgtgccaagacctcccatatttctagggagagtaaatttgtcccactttactgcatcagaaaattgt |
47036504 |
T |
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| Q |
401 |
ttttgctggtttactacatgatgaaggagatcaagctatcgatgtttttgccaaatatgagttacatacgactagtttgctgaccaaaaagttgctgcat |
500 |
Q |
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| T |
47036505 |
ttttgctgatttactacatgatgaaggagatcaagctatcgatgtttttgccaaatatgagttacatacgactagtttgctgaccaaaaagttgctgcat |
47036604 |
T |
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| Q |
501 |
tttttaggggctttttgtctttgcaaaattttggttctagtttaatggtcagggcctagcattatgccactt |
572 |
Q |
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| T |
47036605 |
tttttaggggctttttgtctttgcaaaattttggttctagtttaatggtcagggcctagcattatgccactt |
47036676 |
T |
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