View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13123_high_1 (Length: 292)
Name: NF13123_high_1
Description: NF13123
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13123_high_1 |
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Alignment Details
Target: chr4 (Bit Score: 181; Significance: 8e-98; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 181; E-Value: 8e-98
Query Start/End: Original strand, 45 - 237
Target Start/End: Original strand, 55865397 - 55865589
Alignment:
| Q |
45 |
aaatcctccctcattcaaaatgctttccaactacaattcaagatcatctatttatatggcaagttagtgttaacttttaaaataacttgtgcgtacaagc |
144 |
Q |
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| T |
55865397 |
aaatcctccctcgttcaaaatgctttccaactacaattcaaaatcatctatttatatggcaagttagtgttaacttttaaaataacttgtgcgtacaagc |
55865496 |
T |
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| Q |
145 |
aatcaatgaatatcaatatataaacaggccaagaacaaccgacacaagcacgatttgtgaaacttgaaaagataacagtcatgagaaacccaa |
237 |
Q |
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| T |
55865497 |
aatcaatgaatatcaatatataaacaggccaagaacaaccgacacaagcacgatttgcgaaacttgaaaagataacagtcatgagaaacccaa |
55865589 |
T |
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