View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13125_low_15 (Length: 491)
Name: NF13125_low_15
Description: NF13125
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13125_low_15 |
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Alignment Details
Target: chr2 (Bit Score: 428; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 428; E-Value: 0
Query Start/End: Original strand, 7 - 470
Target Start/End: Original strand, 8031884 - 8032346
Alignment:
| Q |
7 |
gtgagatgaacaaattgctcggttaatccggtcatacgcatcggtacccttccaacctcaagtcgcttccttttttgtgaaatatttgcaaaacaagcct |
106 |
Q |
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| T |
8031884 |
gtgaaatgagcaaattgctcggttaatccggtcatacgcatccgtacgcttccaacctcaagtcgcttccttttttgtgaaatatttgcaaaacaagcct |
8031983 |
T |
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| Q |
107 |
aagctattgattgtggttgctgttcttgaagttgtttgggaataacaattaaaaaaggtggaaaattgatcttggctaaagaactgttagttagggatgg |
206 |
Q |
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| T |
8031984 |
aagctattgattgtggttgctgttgttgaagttgtttgggaataacaattaaaaaaggtggaaaattgatcttggctaaagaactgttggttagggatgg |
8032083 |
T |
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| Q |
207 |
aaatggaaaataagggtttggtagaagagaaagttgtaagctgtaagctaaaagctgtacgttttgcaggtgaatcttagtgctgatcatatttgtttgg |
306 |
Q |
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| T |
8032084 |
aaatggaaaataagggtttggtagaagagaaagttgtaagctgtaagctaaaagctgtacgttttgcaggtgaatcttagtgctgatcatatttgtttgg |
8032183 |
T |
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| Q |
307 |
aattagccaaatcaagagtgaaaaaccagaagtttgggacataggtatggagaaattggaattttggacaaacttaaatggaggtaaaagtgattatttt |
406 |
Q |
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| T |
8032184 |
aattagccaaatcaagagtgaaaaaccagaagtttggga-ataggtatggagaaattggaattttggacaaacttaaattgaggtaaaagtgattatttt |
8032282 |
T |
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| Q |
407 |
gggatgttaatgcatatatgtgaacaagtgtgaattctaatatttattatgcatgtttggattg |
470 |
Q |
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| T |
8032283 |
gggatgttaatgcatatatgtgaacaagtgtgaattctaatatttattatgcatgtttggattg |
8032346 |
T |
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