View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13125_low_30 (Length: 288)
Name: NF13125_low_30
Description: NF13125
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13125_low_30 |
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Alignment Details
Target: chr1 (Bit Score: 248; Significance: 1e-138; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 248; E-Value: 1e-138
Query Start/End: Original strand, 7 - 277
Target Start/End: Original strand, 15488038 - 15488309
Alignment:
| Q |
7 |
tccaagaatattaaatatttttaacagtcattaagtgaactcaagaacattaagaatcatctcgtataggtgacaaacgaatttgaatcacaaagttaac |
106 |
Q |
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| T |
15488038 |
tccaagaaaattaaatatttttaacagtcactaagtgaactcaagaacattaagaatcatctcgtataggtgacaaacgaatttgaatcacaaagttaat |
15488137 |
T |
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| Q |
107 |
atttcctcttcccacacaaacaattggcacctccacaagaactttaaaaacaaattttaccatagtaaacgtttgataaaactacaagaatagttttaca |
206 |
Q |
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| T |
15488138 |
atttcctcttcccacacaaacaattggcacctccacaagaactttaaaaacaaattttaccatagtaaacgtttgataaaactacaagaatagttttaca |
15488237 |
T |
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| Q |
207 |
tcgtggtcacagtccttgatattgcgaaaaattgtggtcaaattagg-tgatatatggttacaattgtgacc |
277 |
Q |
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| T |
15488238 |
tcgtggtcacaatccttgatattgcgaaaaattgtggtcaaattaggctgatatatggttacaattgtgacc |
15488309 |
T |
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