View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13125_low_38 (Length: 238)
Name: NF13125_low_38
Description: NF13125
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13125_low_38 |
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Alignment Details
Target: chr1 (Bit Score: 203; Significance: 1e-111; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 17 - 227
Target Start/End: Original strand, 46774686 - 46774896
Alignment:
| Q |
17 |
tcaaaaacattgggaaaaaagttggtggaattcagcagaaccagttttctttttcttggtcttgttgattttttgttggtagattgatttcttggtcgta |
116 |
Q |
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| T |
46774686 |
tcaaaaacattgggaaaaaagttggtggaattcagcagaaccagttttctttttcttggtcttgttgattttttgttggtagattgatttcttggtcgta |
46774785 |
T |
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| Q |
117 |
tcataacatgtatttatctgttacaaattatagttcactattctcaaatggtactcatgagtgtttcgggaagtttgttgctcgtcaaattcaattggat |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46774786 |
tcataacatgtatttatctgttacaaattatagttcactattctcaaatgttactcatgagtgtttcgggaagtttgttgctcgtcaaattcaattggat |
46774885 |
T |
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| Q |
217 |
tgcatattctt |
227 |
Q |
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||||| ||||| |
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| T |
46774886 |
tgcatcttctt |
46774896 |
T |
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