View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13127_low_1 (Length: 269)
Name: NF13127_low_1
Description: NF13127
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13127_low_1 |
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Alignment Details
Target: chr2 (Bit Score: 210; Significance: 1e-115; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 11 - 250
Target Start/End: Complemental strand, 14783248 - 14783012
Alignment:
| Q |
11 |
catcatcatcatcaatctctcaccatgaaccctaccaacaaagaagacacaattgacattgaagccattgatcatcaagaagaagaaacacaacaacatc |
110 |
Q |
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| T |
14783248 |
catcatcatcatcaatctctcaccacgaaccctaccaacaatgaagacacaattgacattgaagccattgatcatcaagaagaa---acacaacaacatc |
14783152 |
T |
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| Q |
111 |
aaaatcaaccatcaccatttgtcaacaacaaaaaccacctgcatgcaaatgatcaaaaatccattacaaacaaaaggtacatgccacttttgataatcaa |
210 |
Q |
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| T |
14783151 |
aaaatcaaccatcaccatttgtcaacaacaaaaaccacctgcatgcaaatgatcaaaaatccattacaaacaaaaggtacatgccacttttgataatcaa |
14783052 |
T |
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| Q |
211 |
ctttctcttactctttgttggttcaacctcatcaagttta |
250 |
Q |
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| T |
14783051 |
ctatctcttactctttgttggttcaatctcatcaagttta |
14783012 |
T |
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