View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13128_low_10 (Length: 346)
Name: NF13128_low_10
Description: NF13128
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13128_low_10 |
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Alignment Details
Target: chr8 (Bit Score: 272; Significance: 1e-152; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 272; E-Value: 1e-152
Query Start/End: Original strand, 16 - 327
Target Start/End: Original strand, 34839242 - 34839553
Alignment:
| Q |
16 |
agatgaagtcagtataaccgaatctttcttgtatatcaagtgatctcatttaatagttcatgccttaaaattttagttttcagacatcgtactacctccc |
115 |
Q |
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| T |
34839242 |
agatgaagttagtataaccgaatctttcttatgtatcaagtgatctcatttgatcgttaatgccttaaaattttaattttcagacatcgtattacctccc |
34839341 |
T |
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| Q |
116 |
ctaacactctttttactgtcttttatcgtataagttgtagttatataacaatgtaatgaatttattataaaagaatttgatttaagcggttttcccttag |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
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| T |
34839342 |
ctaacactctttttactgtcttttatcgtataagttgtagttatataacaatgtaatgaatttattataaaagaatttgatttaagcggttttcccttgg |
34839441 |
T |
|
| Q |
216 |
caaactatattttcgtatcttttatcattaaattagtggcattctgactttgaaaacaattaaaattaaagttaaatgtcagtaataatctgacagatgt |
315 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
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| T |
34839442 |
caaactatattttcgtatcttttatcattaaattagtggcattctgactttgaaaacaattaaaattaaagttaaatgtgagtaataatctgacagatgt |
34839541 |
T |
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| Q |
316 |
tatagacagatg |
327 |
Q |
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|||||||||||| |
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| T |
34839542 |
tatagacagatg |
34839553 |
T |
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