View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13130_low_3 (Length: 394)

Name: NF13130_low_3
Description: NF13130
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13130_low_3
NF13130_low_3
[»] chr3 (18 HSPs)
chr3 (11-182)||(47413797-47413968)
chr3 (89-188)||(46480221-46480320)
chr3 (85-188)||(46506843-46506951)
chr3 (88-174)||(51944317-51944403)
chr3 (91-178)||(46236395-46236482)
chr3 (85-188)||(46491130-46491233)
chr3 (93-184)||(46498380-46498471)
chr3 (78-178)||(16025895-16025995)
chr3 (107-188)||(46474369-46474450)
chr3 (90-182)||(5156674-5156766)
chr3 (98-182)||(5160714-5160798)
chr3 (90-182)||(46532342-46532434)
chr3 (90-181)||(46553795-46553886)
chr3 (93-181)||(46526015-46526103)
chr3 (95-188)||(46484474-46484567)
chr3 (90-186)||(46535370-46535466)
chr3 (90-181)||(46544913-46545004)
chr3 (10-46)||(16025836-16025872)
[»] chr4 (3 HSPs)
chr4 (85-194)||(15556433-15556542)
chr4 (87-181)||(35155835-35155929)
chr4 (90-174)||(35162858-35162942)
[»] chr8 (3 HSPs)
chr8 (90-188)||(9675303-9675401)
chr8 (90-188)||(9692325-9692423)
chr8 (93-182)||(21463785-21463874)
[»] chr2 (4 HSPs)
chr2 (105-182)||(20168627-20168704)
chr2 (105-182)||(20359580-20359657)
chr2 (105-182)||(20145070-20145147)
chr2 (105-158)||(20251386-20251439)
[»] chr7 (7 HSPs)
chr7 (92-191)||(17699604-17699703)
chr7 (92-182)||(17718537-17718627)
chr7 (92-182)||(17736950-17737040)
chr7 (92-191)||(16722590-16722689)
chr7 (92-182)||(17708713-17708803)
chr7 (92-182)||(17736367-17736457)
chr7 (104-182)||(16730591-16730669)


Alignment Details
Target: chr3 (Bit Score: 144; Significance: 1e-75; HSPs: 18)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 11 - 182
Target Start/End: Complemental strand, 47413968 - 47413797
Alignment:
Q  11 aatgaagaaggaactgaagctgctgcggtcactgcttgtactgttgaaatcaggggcataagtattataagtcatcgactagactttgtagccgaccacc 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  47413968 aatgaagaaggaactgaagctgctgcggtcactgcttgtactgttgaaatcaggggtataagtattataagtcatcgactagactttgtagccgaccacc 47413869  T
Q  111 ctttcttatttctaataagagaagatttgaccggcacaatcctctttgttggacaggtgctcaatcctcttg 182  Q
    |||||||||||||||| ||||||||||  ||||  |||||||||||||||||||| ||||||||||||||||    
T  47413868 ctttcttatttctaattagagaagattcaaccgaaacaatcctctttgttggacatgtgctcaatcctcttg 47413797  T

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Target: chr3; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 89 - 188
Target Start/End: Original strand, 46480221 - 46480320
Alignment:
Q  89 ctagactttgtagccgaccaccctttcttatttctaataagagaagatttgaccggcacaatcctctttgttggacaggtgctcaatcctcttgctgggt 188  Q
    |||||||||||||| |||||||||||||||||| | || |||||||| |||||||| |||||| ||||||||||||||||||||||||||||||||||||    
T  46480221 ctagactttgtagctgaccaccctttcttatttatgattagagaagacttgaccggaacaatcatctttgttggacaggtgctcaatcctcttgctgggt 46480320  T

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Target: chr3; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 85 - 188
Target Start/End: Complemental strand, 46506951 - 46506843
Alignment:
Q  85 tcgactagactttgtagccgaccaccctttcttatttctaataagagaagatttgaccggcacaatcctc-----tttgttggacaggtgctcaatcctc 179  Q
    |||||||||||||||||| |||||||| |||||||||||||| | |||||||| |||||| |||||||||     |||||||||||||||||||||||||    
T  46506951 tcgactagactttgtagctgaccacccattcttatttctaattaaagaagattggaccggaacaatcctctttaatttgttggacaggtgctcaatcctc 46506852  T
Q  180 ttgctgggt 188  Q
    |||||||||    
T  46506851 ttgctgggt 46506843  T

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Target: chr3; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 88 - 174
Target Start/End: Original strand, 51944317 - 51944403
Alignment:
Q  88 actagactttgtagccgaccaccctttcttatttctaataagagaagatttgaccggcacaatcctctttgttggacaggtgctcaa 174  Q
    ||||||||||||||| |||||||||||||||||||| || |||||||||||||| || |||||| ||||||||||||||||||||||    
T  51944317 actagactttgtagctgaccaccctttcttatttctgattagagaagatttgactggaacaatcatctttgttggacaggtgctcaa 51944403  T

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Target: chr3; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 91 - 178
Target Start/End: Complemental strand, 46236482 - 46236395
Alignment:
Q  91 agactttgtagccgaccaccctttcttatttctaataagagaagatttgaccggcacaatcctctttgttggacaggtgctcaatcct 178  Q
    |||||||||||| || ||||||||| |||||||||| ||||||| || |||||| ||||||||||||| |||||||||||||||||||    
T  46236482 agactttgtagctgatcaccctttcctatttctaattagagaagtttcgaccggaacaatcctctttgctggacaggtgctcaatcct 46236395  T

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Target: chr3; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 85 - 188
Target Start/End: Original strand, 46491130 - 46491233
Alignment:
Q  85 tcgactagactttgtagccgaccaccctttcttatttctaataagagaagatttgaccggcacaatcctctttgttggacaggtgctcaatcctcttgct 184  Q
    ||||||||||||||| || | |||||||||||| ||| | || |||||||| ||||| || |||||| ||||||||||||||||| ||||||||||||||    
T  46491130 tcgactagactttgtggctggccaccctttcttgtttatgattagagaagaattgactggaacaatcatctttgttggacaggtgttcaatcctcttgct 46491229  T
Q  185 gggt 188  Q
    ||||    
T  46491230 gggt 46491233  T

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Target: chr3; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 93 - 184
Target Start/End: Original strand, 46498380 - 46498471
Alignment:
Q  93 actttgtagccgaccaccctttcttatttctaataagagaagatttgaccggcacaatcctctttgttggacaggtgctcaatcctcttgct 184  Q
    |||||||||| |||||||| ||||||||| | || ||||||||||||||||| || ||| |||||||||| |||||||||||||||||||||    
T  46498380 actttgtagctgaccacccattcttatttattatcagagaagatttgaccggaactatcgtctttgttgggcaggtgctcaatcctcttgct 46498471  T

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Target: chr3; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 78 - 178
Target Start/End: Original strand, 16025895 - 16025995
Alignment:
Q  78 taagtcatcgactagactttgtagccgaccaccctttcttatttctaataagagaagatttgaccggcacaatcctctttgttggacaggtgctcaatcc 177  Q
    |||||| |||| |||| |||||||| ||||||||||||||||||||||| ||||||||||| ||||  |||||||||||||| || || || ||||||||    
T  16025895 taagtcctcgagtagattttgtagctgaccaccctttcttatttctaattagagaagatttaaccgaaacaatcctctttgtagggcaagtactcaatcc 16025994  T
Q  178 t 178  Q
    |    
T  16025995 t 16025995  T

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Target: chr3; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 107 - 188
Target Start/End: Original strand, 46474369 - 46474450
Alignment:
Q  107 caccctttcttatttctaataagagaagatttgaccggcacaatcctctttgttggacaggtgctcaatcctcttgctgggt 188  Q
    ||||| ||||||| |||||| ||||| |||||| |||| |||||| ||||||||||||||||||| |||||||||| |||||    
T  46474369 cacccattcttatatctaattagagatgatttggccggaacaatcatctttgttggacaggtgcttaatcctcttgatgggt 46474450  T

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Target: chr3; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 90 - 182
Target Start/End: Original strand, 5156674 - 5156766
Alignment:
Q  90 tagactttgtagccgaccaccctttcttatttctaataagagaagatttgaccggcacaatcctctttgttggacaggtgctcaatcctcttg 182  Q
    ||||||||||||| || |||||||||||||||||||| |||||| | | ||| || || || |||||||||||||| ||||||||||| ||||    
T  5156674 tagactttgtagctgatcaccctttcttatttctaattagagaaaactcgactggaaccattctctttgttggacaagtgctcaatccacttg 5156766  T

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Target: chr3; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 98 - 182
Target Start/End: Original strand, 5160714 - 5160798
Alignment:
Q  98 gtagccgaccaccctttcttatttctaataagagaagatttgaccggcacaatcctctttgttggacaggtgctcaatcctcttg 182  Q
    ||||| |||||||||||||||||||| || |||||||||| ||| || || || |||||||||||||| || |||||||||||||    
T  5160714 gtagctgaccaccctttcttatttctgattagagaagattggactggaaccattctctttgttggacaagtactcaatcctcttg 5160798  T

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Target: chr3; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 90 - 182
Target Start/End: Original strand, 46532342 - 46532434
Alignment:
Q  90 tagactttgtagccgaccaccctttcttatttctaataagagaagatttgaccggcacaatcctctttgttggacaggtgctcaatcctcttg 182  Q
    ||||||||||||| |||||||||||| | ||| | |||||||| |||||| | || ||||| ||||||||||| || ||||||||||||||||    
T  46532342 tagactttgtagctgaccaccctttcatgtttttgataagagacgatttgtctggtacaatactctttgttggccaagtgctcaatcctcttg 46532434  T

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Target: chr3; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 90 - 181
Target Start/End: Complemental strand, 46553886 - 46553795
Alignment:
Q  90 tagactttgtagccgaccaccctttcttatttctaataagagaagatttgaccggcacaatcctctttgttggacaggtgctcaatcctctt 181  Q
    ||||||||||||| |||||||||||||| ||| | || |||||||||||| | || ||||| ||||||||||| || || ||||||||||||    
T  46553886 tagactttgtagctgaccaccctttcttgttttttattagagaagatttgtctggtacaatactctttgttggccaagttctcaatcctctt 46553795  T

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Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 93 - 181
Target Start/End: Complemental strand, 46526103 - 46526015
Alignment:
Q  93 actttgtagccgaccaccctttcttatttctaataagagaagatttgaccggcac-aatcctctttgttggacaggtgctcaatcctctt 181  Q
    |||||||||| ||||||| |||||| |||||||| |||||||||||||| || || |||||||||||||||||| || | ||||||||||    
T  46526103 actttgtagcagaccacc-tttcttgtttctaattagagaagatttgactggaacaaatcctctttgttggacaagtacccaatcctctt 46526015  T

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Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 95 - 188
Target Start/End: Original strand, 46484474 - 46484567
Alignment:
Q  95 tttgtagccgaccaccctttcttatttctaataagagaagatttgaccggcacaatcctctttgttggacaggtgctcaatcctcttgctgggt 188  Q
    |||||||| || ||||| ||||||| |||||| ||||| |||||| | || |||||| ||||||||||||| ||||| |||| ||||| |||||    
T  46484474 tttgtagctgatcacccattcttatatctaattagagatgatttggctggaacaatcatctttgttggacatgtgcttaatcatcttgatgggt 46484567  T

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Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 90 - 186
Target Start/End: Original strand, 46535370 - 46535466
Alignment:
Q  90 tagactttgtagccgaccaccctttcttatttctaataagagaagatttgaccggcacaatcctctttgttggacaggtgctcaatcctcttgctgg 186  Q
    ||||||||||||| ||||| |||||||| ||| | ||||||||||||||  | || ||||| | ||||||||| || ||||  ||||||||||||||    
T  46535370 tagactttgtagctgaccatcctttcttgtttttgataagagaagatttatctggtacaatacactttgttgggcaagtgcataatcctcttgctgg 46535466  T

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Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 90 - 181
Target Start/End: Original strand, 46544913 - 46545004
Alignment:
Q  90 tagactttgtagccgaccaccctttcttatttctaataagagaagatttgaccggcacaatcctctttgttggacaggtgctcaatcctctt 181  Q
    ||||||||||||| |||||||||||||| ||| | || |||||||||||| | || ||  | |||||| ||||||| || ||||||||||||    
T  46544913 tagactttgtagctgaccaccctttcttgtttttgatcagagaagatttgtctggaacggtactctttattggacaagttctcaatcctctt 46545004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 46
Target Start/End: Original strand, 16025836 - 16025872
Alignment:
Q  10 aaatgaagaaggaactgaagctgctgcggtcactgct 46  Q
    |||||||||||||||||||| |||||| |||||||||    
T  16025836 aaatgaagaaggaactgaagttgctgcagtcactgct 16025872  T

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Target: chr4 (Bit Score: 94; Significance: 9e-46; HSPs: 3)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 85 - 194
Target Start/End: Original strand, 15556433 - 15556542
Alignment:
Q  85 tcgactagactttgtagccgaccaccctttcttatttctaataagagaagatttgaccggcacaatcctctttgttggacaggtgctcaatcctcttgct 184  Q
    |||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||    
T  15556433 tcgactagactttgtagctgaccacccattcttatttctaataagagaagatttgaccggcacaatcctctttgttggacaggtgcttaatccttttgct 15556532  T
Q  185 gggtaatcat 194  Q
    ||||||||||    
T  15556533 gggtaatcat 15556542  T

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Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 87 - 181
Target Start/End: Original strand, 35155835 - 35155929
Alignment:
Q  87 gactagactttgtagccgaccaccctttcttatttctaataagagaagatttgaccggcacaatcctctttgttggacaggtgctcaatcctctt 181  Q
    ||||||||||| |||| || ||||||||||||||| |||| |||||||||||||||   |||||||||||||  ||||| ||| |||| ||||||    
T  35155835 gactagactttatagctgatcaccctttcttatttttaattagagaagatttgacccaaacaatcctctttgccggacaagtgttcaaccctctt 35155929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 90 - 174
Target Start/End: Original strand, 35162858 - 35162942
Alignment:
Q  90 tagactttgtagccgaccaccctttcttatttctaataagagaagatttgaccggcacaatcctctttgttggacaggtgctcaa 174  Q
    |||||||| |||| || || ||||||||||||||||| |||||||||| ||||   |||||||||||||  ||||| ||||||||    
T  35162858 tagactttatagctgatcatcctttcttatttctaattagagaagattcgacccaaacaatcctctttgcgggacaagtgctcaa 35162942  T

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Target: chr8 (Bit Score: 47; Significance: 1e-17; HSPs: 3)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 90 - 188
Target Start/End: Complemental strand, 9675401 - 9675303
Alignment:
Q  90 tagactttgtagccgaccaccctttcttatttctaataagagaagatttgaccggcacaatcctctttgttggacaggtgctcaatcctcttgctgggt 188  Q
    |||||||| ||||||| ||||||||| |||||||||| |||||||||| ||||   |||||| ||||||  |||||||| ||||||||||||| |||||    
T  9675401 tagactttatagccgatcaccctttcctatttctaattagagaagattcgacccaaacaatcatctttgccggacaggttctcaatcctcttgttgggt 9675303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 90 - 188
Target Start/End: Complemental strand, 9692423 - 9692325
Alignment:
Q  90 tagactttgtagccgaccaccctttcttatttctaataagagaagatttgaccggcacaatcctctttgttggacaggtgctcaatcctcttgctgggt 188  Q
    |||||||| ||||||| ||||||||| |||||||||| |||||||||||||||   || ||| ||||||  |||||||| ||||||||||||| |||||    
T  9692423 tagactttatagccgatcaccctttcctatttctaattagagaagatttgacccaaacgatcatctttgccggacaggttctcaatcctcttgttgggt 9692325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 93 - 182
Target Start/End: Complemental strand, 21463874 - 21463785
Alignment:
Q  93 actttgtagccgaccaccctttcttatttctaataagagaagatttgaccggcacaatcctctttgttggacaggtgctcaatcctcttg 182  Q
    |||| ||||| || ||||||||||| ||| | || |||||||||||| |||| || || |||||| |||| || ||||||||||||||||    
T  21463874 acttcgtagctgatcaccctttcttgtttttgatcagagaagatttgtccggaaccatactctttattgggcaagtgctcaatcctcttg 21463785  T

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Target: chr2 (Bit Score: 46; Significance: 4e-17; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 105 - 182
Target Start/End: Complemental strand, 20168704 - 20168627
Alignment:
Q  105 accaccctttcttatttctaataagagaagatttgaccggcacaatcctctttgttggacaggtgctcaatcctcttg 182  Q
    ||||||| |||||||||||||| || ||||||||||| || |||||||||||||| || || ||||||||||||||||    
T  20168704 accaccccttcttatttctaattagggaagatttgacgggaacaatcctctttgtcgggcaagtgctcaatcctcttg 20168627  T

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Target: chr2; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 105 - 182
Target Start/End: Original strand, 20359580 - 20359657
Alignment:
Q  105 accaccctttcttatttctaataagagaagatttgaccggcacaatcctctttgttggacaggtgctcaatcctcttg 182  Q
    ||||||| |||||||||||||| || ||||||||||| || |||||||||||||| || || ||||||||||||||||    
T  20359580 accaccccttcttatttctaattagggaagatttgacgggaacaatcctctttgtcgggcaagtgctcaatcctcttg 20359657  T

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Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 105 - 182
Target Start/End: Original strand, 20145070 - 20145147
Alignment:
Q  105 accaccctttcttatttctaataagagaagatttgaccggcacaatcctctttgttggacaggtgctcaatcctcttg 182  Q
    ||||||| |||||||||||||| || ||||||||||| ||  ||||||||||||| || || ||||||||||||||||    
T  20145070 accaccccttcttatttctaattagggaagatttgacgggatcaatcctctttgtcgggcaagtgctcaatcctcttg 20145147  T

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Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 105 - 158
Target Start/End: Original strand, 20251386 - 20251439
Alignment:
Q  105 accaccctttcttatttctaataagagaagatttgaccggcacaatcctctttg 158  Q
    ||||||| |||||||||||||| |||||||||||||| || |||||||||||||    
T  20251386 accaccccttcttatttctaattagagaagatttgacgggaacaatcctctttg 20251439  T

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Target: chr7 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 7)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 92 - 191
Target Start/End: Original strand, 17699604 - 17699703
Alignment:
Q  92 gactttgtagccgaccaccctttcttatttctaataagagaagatttgaccggcacaatcctctttgttggacaggtgctcaatcctcttgctgggtaat 191  Q
    ||||||||||| ||||||||||| |||||||| || |||||||| || |  || || || |||||||||||| ||||| |||||||||||| ||| ||||    
T  17699604 gactttgtagctgaccacccttttttatttctgatcagagaagagtttagtggaaccatactctttgttggaaaggtggtcaatcctcttgatggttaat 17699703  T

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Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 92 - 182
Target Start/End: Original strand, 17718537 - 17718627
Alignment:
Q  92 gactttgtagccgaccaccctttcttatttctaataagagaagatttgaccggcacaatcctctttgttggacaggtgctcaatcctcttg 182  Q
    ||||||||||| ||||||||||| |||||||| || |||||||| || |  || || || |||||||||||| ||||| ||||||||||||    
T  17718537 gactttgtagctgaccacccttttttatttctgatcagagaagagtttagtggaaccatactctttgttggaaaggtggtcaatcctcttg 17718627  T

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Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 92 - 182
Target Start/End: Original strand, 17736950 - 17737040
Alignment:
Q  92 gactttgtagccgaccaccctttcttatttctaataagagaagatttgaccggcacaatcctctttgttggacaggtgctcaatcctcttg 182  Q
    ||||||||||| ||||||||||| |||||||| || |||||||| || |  || || || |||||||||||| ||||| ||||||||||||    
T  17736950 gactttgtagctgaccacccttttttatttctgatcagagaagagtttagtggaaccatactctttgttggaaaggtggtcaatcctcttg 17737040  T

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Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 92 - 191
Target Start/End: Original strand, 16722590 - 16722689
Alignment:
Q  92 gactttgtagccgaccaccctttcttatttctaataagagaagatttgaccggcacaatcctctttgttggacaggtgctcaatcctcttgctgggtaat 191  Q
    |||||||| || ||||||||||| |||||||| || |||||||| || |  || || || |||||||||||| ||||| |||||||||||| ||| ||||    
T  16722590 gactttgttgctgaccacccttttttatttctgatcagagaagagtttagtggaaccatactctttgttggaaaggtggtcaatcctcttgatggttaat 16722689  T

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Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 92 - 182
Target Start/End: Original strand, 17708713 - 17708803
Alignment:
Q  92 gactttgtagccgaccaccctttcttatttctaataagagaagatttgaccggcacaatcctctttgttggacaggtgctcaatcctcttg 182  Q
    |||||||| || ||||||||||| |||||||| || |||||||| || |  || || || |||||||||||| ||||| ||||||||||||    
T  17708713 gactttgttgctgaccacccttttttatttctgatcagagaagagtttagtggaaccatactctttgttggaaaggtggtcaatcctcttg 17708803  T

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Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 92 - 182
Target Start/End: Original strand, 17736367 - 17736457
Alignment:
Q  92 gactttgtagccgaccaccctttcttatttctaataagagaagatttgaccggcacaatcctctttgttggacaggtgctcaatcctcttg 182  Q
    |||||||| || ||||||||||| |||||||| || |||||||| || |  || || || |||||||||||| ||||| ||||||||||||    
T  17736367 gactttgttgctgaccacccttttttatttctgatcagagaagagtttagtggaaccatactctttgttggaaaggtggtcaatcctcttg 17736457  T

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Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 104 - 182
Target Start/End: Original strand, 16730591 - 16730669
Alignment:
Q  104 gaccaccctttcttatttctaataagagaagatttgaccggcacaatcctctttgttggacaggtgctcaatcctcttg 182  Q
    ||||||||||| |||||||| || |||||||| || |  || || || |||||||||||| ||||| ||||||||||||    
T  16730591 gaccacccttttttatttctgatcagagaagagtttagtggaaccatactctttgttggaaaggtggtcaatcctcttg 16730669  T

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