View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13132_high_7 (Length: 359)
Name: NF13132_high_7
Description: NF13132
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13132_high_7 |
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Alignment Details
Target: chr3 (Bit Score: 325; Significance: 0; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 325; E-Value: 0
Query Start/End: Original strand, 1 - 337
Target Start/End: Complemental strand, 44696614 - 44696278
Alignment:
| Q |
1 |
tcaaaacccaatttcagcttcttcttcacaaacagtactaagctgccatcaaataggattagggtttgaagataagggtttaggtttagaatcaattaga |
100 |
Q |
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| T |
44696614 |
tcaaaacccaatttcagcttcttcttcacaaacagtactaagctgccctcaaataggattagggtttgaagataagggtttaggtttagaatcaattaga |
44696515 |
T |
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| Q |
101 |
aaaggtaaagaaggattggaaggcttgaattgctataatgaccatcatcataatggcatgttatcatcaccaccatcatcatcctcatgtcaaattatga |
200 |
Q |
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| T |
44696514 |
aaaggtaaagaaggattagaaggcttgaattgctataatgaccatcatcataatggcatgttatcatcaccaccatcatcatcctcatgtcaaattatga |
44696415 |
T |
|
| Q |
201 |
atcctcgtggtgaagacttggctacaccgattcctagtgattctcatcattacttcgccggatcaaataatgttaatcatcatcacaaccaatctggttt |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
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| T |
44696414 |
atcctcgtggtgaagacttggctacaccgattcctagtgattctcatcattacttcgccggatcaaataatgttaatcatcatcgcaaccaatctggttt |
44696315 |
T |
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| Q |
301 |
gtggtttacgctacgctcctttaccaaccggtgagct |
337 |
Q |
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||||||||||||||||||||||||||||||||||||| |
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| T |
44696314 |
gtggtttacgctacgctcctttaccaaccggtgagct |
44696278 |
T |
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