View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13133_high_47 (Length: 243)

Name: NF13133_high_47
Description: NF13133
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13133_high_47
NF13133_high_47
[»] chr6 (20 HSPs)
chr6 (1-111)||(34883526-34883636)
chr6 (132-239)||(31110759-31110864)
chr6 (137-239)||(17598554-17598656)
chr6 (159-239)||(11427640-11427720)
chr6 (136-239)||(31976247-31976350)
chr6 (128-239)||(23128125-23128236)
chr6 (134-239)||(30341358-30341463)
chr6 (127-239)||(15832567-15832679)
chr6 (135-239)||(15990040-15990144)
chr6 (159-239)||(32869700-32869780)
chr6 (137-239)||(4231548-4231650)
chr6 (137-239)||(15508022-15508124)
chr6 (137-239)||(29857827-29857929)
chr6 (134-239)||(6209463-6209568)
chr6 (142-239)||(22880656-22880753)
chr6 (137-205)||(31109432-31109500)
chr6 (133-239)||(12732478-12732584)
chr6 (136-202)||(22422053-22422119)
chr6 (142-239)||(28536486-28536581)
chr6 (137-239)||(31953028-31953130)
[»] chr3 (32 HSPs)
chr3 (131-239)||(11347920-11348028)
chr3 (137-239)||(26141530-26141632)
chr3 (137-239)||(47531865-47531967)
chr3 (135-239)||(27714889-27714993)
chr3 (135-239)||(41189762-41189866)
chr3 (133-239)||(49607410-49607516)
chr3 (136-239)||(17470404-17470507)
chr3 (137-239)||(51419358-51419460)
chr3 (137-239)||(53982011-53982113)
chr3 (159-239)||(26754717-26754797)
chr3 (135-239)||(54868893-54868997)
chr3 (136-239)||(8956761-8956864)
chr3 (160-239)||(31456712-31456791)
chr3 (137-239)||(33644200-33644302)
chr3 (141-239)||(52629304-52629402)
chr3 (135-239)||(11907369-11907473)
chr3 (191-239)||(25407145-25407193)
chr3 (136-239)||(24699952-24700055)
chr3 (136-239)||(35536625-35536728)
chr3 (135-205)||(11095385-11095455)
chr3 (137-239)||(14623837-14623939)
chr3 (137-239)||(20764913-20765015)
chr3 (142-239)||(13898053-13898150)
chr3 (159-239)||(8076415-8076495)
chr3 (167-239)||(9563029-9563101)
chr3 (135-239)||(33118849-33118953)
chr3 (135-211)||(35093583-35093659)
chr3 (159-239)||(36331327-36331407)
chr3 (159-239)||(48587089-48587169)
chr3 (134-205)||(36707456-36707527)
chr3 (149-195)||(32605956-32606002)
chr3 (137-239)||(45058551-45058652)
[»] chr2 (32 HSPs)
chr2 (132-239)||(42257188-42257295)
chr2 (137-239)||(40613900-40614002)
chr2 (135-239)||(9058478-9058582)
chr2 (131-239)||(38273140-38273248)
chr2 (136-239)||(5574486-5574589)
chr2 (136-239)||(33436210-33436313)
chr2 (133-239)||(45097733-45097839)
chr2 (142-239)||(19930818-19930915)
chr2 (135-239)||(10249380-10249484)
chr2 (132-239)||(33436098-33436205)
chr2 (137-239)||(13438343-13438445)
chr2 (137-239)||(17473020-17473122)
chr2 (137-239)||(27864704-27864806)
chr2 (137-239)||(28381653-28381755)
chr2 (142-239)||(28863460-28863557)
chr2 (136-237)||(32505648-32505749)
chr2 (137-237)||(4060685-4060785)
chr2 (136-235)||(2533123-2533221)
chr2 (137-239)||(38732354-38732456)
chr2 (137-239)||(40701478-40701580)
chr2 (142-239)||(41575142-41575240)
chr2 (159-239)||(2997485-2997565)
chr2 (136-239)||(7465733-7465836)
chr2 (132-239)||(20700810-20700917)
chr2 (136-239)||(36168835-36168938)
chr2 (186-239)||(13365402-13365455)
chr2 (135-239)||(30915461-30915565)
chr2 (134-205)||(38882846-38882916)
chr2 (137-235)||(43490121-43490219)
chr2 (137-202)||(17820039-17820104)
chr2 (187-239)||(3034981-3035033)
chr2 (187-239)||(3154193-3154245)
[»] chr5 (24 HSPs)
chr5 (136-239)||(6679697-6679800)
chr5 (137-239)||(28177775-28177877)
chr5 (136-239)||(2740273-2740376)
chr5 (133-239)||(13811648-13811754)
chr5 (137-239)||(26720516-26720618)
chr5 (137-239)||(26990265-26990367)
chr5 (137-239)||(35943890-35943992)
chr5 (137-237)||(14831814-14831914)
chr5 (135-239)||(15409608-15409712)
chr5 (136-239)||(2252166-2252269)
chr5 (133-239)||(18520882-18520988)
chr5 (137-239)||(35785199-35785301)
chr5 (137-239)||(40145407-40145509)
chr5 (134-239)||(3921263-3921368)
chr5 (133-237)||(31008984-31009088)
chr5 (160-235)||(42414304-42414379)
chr5 (137-239)||(33149636-33149738)
chr5 (137-237)||(20073516-20073616)
chr5 (135-239)||(36732940-36733044)
chr5 (160-239)||(39557515-39557594)
chr5 (149-239)||(33825322-33825412)
chr5 (135-239)||(39688895-39688999)
chr5 (136-205)||(41470448-41470517)
chr5 (159-211)||(16327923-16327975)
[»] chr1 (28 HSPs)
chr1 (134-239)||(32813244-32813349)
chr1 (137-239)||(27564733-27564835)
chr1 (136-237)||(51898683-51898784)
chr1 (136-239)||(37926436-37926539)
chr1 (133-239)||(8346386-8346492)
chr1 (135-239)||(49811525-49811629)
chr1 (133-239)||(5958998-5959104)
chr1 (142-239)||(44548374-44548471)
chr1 (132-236)||(37649193-37649297)
chr1 (135-235)||(38632323-38632423)
chr1 (134-237)||(2581912-2582015)
chr1 (133-239)||(38595150-38595256)
chr1 (137-239)||(41608491-41608593)
chr1 (137-235)||(48716284-48716382)
chr1 (131-239)||(26440728-26440836)
chr1 (137-239)||(43132-43234)
chr1 (137-239)||(9474874-9474976)
chr1 (137-239)||(47452318-47452420)
chr1 (137-239)||(50590998-50591100)
chr1 (142-235)||(26274437-26274530)
chr1 (138-235)||(44453980-44454077)
chr1 (159-239)||(3000341-3000421)
chr1 (159-239)||(50630480-50630560)
chr1 (164-239)||(41758832-41758907)
chr1 (159-237)||(11152378-11152456)
chr1 (186-237)||(3302533-3302584)
chr1 (180-237)||(48489343-48489400)
chr1 (134-206)||(23597122-23597194)
[»] chr7 (33 HSPs)
chr7 (137-239)||(19329842-19329944)
chr7 (142-239)||(3784000-3784097)
chr7 (138-239)||(35522877-35522978)
chr7 (133-237)||(7727902-7728006)
chr7 (135-239)||(19436185-19436289)
chr7 (136-239)||(3434561-3434664)
chr7 (159-239)||(3694389-3694469)
chr7 (136-239)||(22343360-22343463)
chr7 (136-239)||(36361911-36362014)
chr7 (133-239)||(35468853-35468959)
chr7 (134-239)||(40957704-40957809)
chr7 (135-239)||(7389387-7389491)
chr7 (135-239)||(38044195-38044299)
chr7 (160-239)||(8238236-8238315)
chr7 (136-239)||(36362025-36362128)
chr7 (128-239)||(41915732-41915843)
chr7 (137-239)||(21234401-21234503)
chr7 (137-239)||(32564424-32564526)
chr7 (137-239)||(35137533-35137635)
chr7 (137-231)||(46374808-46374902)
chr7 (142-239)||(32951491-32951588)
chr7 (135-239)||(8080381-8080485)
chr7 (135-239)||(36208171-36208275)
chr7 (136-239)||(26296643-26296746)
chr7 (128-239)||(38837208-38837319)
chr7 (132-239)||(40846111-40846218)
chr7 (136-239)||(46033799-46033902)
chr7 (137-239)||(4999512-4999614)
chr7 (137-239)||(38267040-38267142)
chr7 (133-206)||(18207176-18207249)
chr7 (167-239)||(16374822-16374894)
chr7 (133-213)||(45223038-45223118)
chr7 (137-239)||(41423682-41423784)
[»] chr8 (27 HSPs)
chr8 (136-237)||(37038478-37038579)
chr8 (136-239)||(32032724-32032826)
chr8 (133-239)||(5957826-5957932)
chr8 (137-239)||(43414579-43414681)
chr8 (159-239)||(40423941-40424021)
chr8 (137-239)||(15048180-15048281)
chr8 (137-239)||(15197333-15197435)
chr8 (139-239)||(10621085-10621185)
chr8 (137-239)||(504119-504221)
chr8 (137-239)||(1179938-1180040)
chr8 (133-239)||(16056399-16056505)
chr8 (133-239)||(16383373-16383479)
chr8 (159-239)||(14547944-14548024)
chr8 (135-239)||(15258927-15259031)
chr8 (135-239)||(24307791-24307895)
chr8 (137-239)||(12831047-12831149)
chr8 (137-239)||(23122595-23122697)
chr8 (137-239)||(34012294-34012396)
chr8 (135-239)||(4854861-4854965)
chr8 (135-239)||(34307214-34307318)
chr8 (135-239)||(42221513-42221617)
chr8 (137-239)||(30479472-30479574)
chr8 (134-239)||(10284629-10284734)
chr8 (159-239)||(8841430-8841510)
chr8 (136-192)||(25838196-25838252)
chr8 (133-200)||(24307625-24307692)
chr8 (186-239)||(9122234-9122287)
[»] scaffold0321 (1 HSPs)
scaffold0321 (128-239)||(10107-10218)
[»] chr4 (25 HSPs)
chr4 (137-239)||(41236347-41236449)
chr4 (133-239)||(50052426-50052532)
chr4 (137-237)||(50526171-50526271)
chr4 (135-239)||(55475189-55475293)
chr4 (128-239)||(19670714-19670825)
chr4 (136-239)||(47986207-47986310)
chr4 (169-239)||(56300163-56300233)
chr4 (135-235)||(29547961-29548061)
chr4 (135-239)||(32766956-32767060)
chr4 (137-239)||(6034044-6034146)
chr4 (133-239)||(42044365-42044471)
chr4 (134-239)||(29239883-29239988)
chr4 (135-239)||(48183047-48183151)
chr4 (137-239)||(40574779-40574881)
chr4 (136-239)||(44536744-44536846)
chr4 (136-239)||(50813890-50813993)
chr4 (133-239)||(480445-480551)
chr4 (137-239)||(11511460-11511562)
chr4 (137-239)||(31910192-31910294)
chr4 (159-239)||(17983741-17983821)
chr4 (160-239)||(29977908-29977987)
chr4 (137-239)||(3481654-3481756)
chr4 (137-239)||(8343161-8343263)
chr4 (186-239)||(41823931-41823984)
chr4 (137-235)||(54473535-54473633)
[»] scaffold1268 (1 HSPs)
scaffold1268 (137-239)||(927-1029)
[»] scaffold1267 (1 HSPs)
scaffold1267 (137-239)||(927-1029)
[»] scaffold0237 (1 HSPs)
scaffold0237 (137-239)||(4029-4131)
[»] scaffold0018 (1 HSPs)
scaffold0018 (162-239)||(152523-152600)
[»] scaffold0316 (1 HSPs)
scaffold0316 (160-239)||(17077-17156)


Alignment Details
Target: chr6 (Bit Score: 99; Significance: 5e-49; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 34883526 - 34883636
Alignment:
Q  1 cccctcacttttcctaatcattaatagagtaacacaaatagcatccgttttaacgtattctttctaaaatttactttttcattagataaaatatatatgg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||| ||||||||    
T  34883526 cccctcacttttcctaatcattaatagagtaacacaaatagcatccattttaacgtattctttctcaaatttactttttcattagataaaacatatatgg 34883625  T
Q  101 gtcttaccact 111  Q
    |||||||||||    
T  34883626 gtcttaccact 34883636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 132 - 239
Target Start/End: Complemental strand, 31110864 - 31110759
Alignment:
Q  132 taaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcaca 231  Q
    |||||||||||||||| ||||||||  ||||||||||||||| | ||||||| |||||  |||||||||||||| | || ||||| ||||||||||||||    
T  31110864 taaaagagttatgatacatagacatccttaggtggcaatacaccctttgacactcaca--aaaatctgacacgtaaccacatggaccctgcacaagcaca 31110767  T
Q  232 ctttctct 239  Q
    ||||||||    
T  31110766 ctttctct 31110759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 137 - 239
Target Start/End: Original strand, 17598554 - 17598656
Alignment:
Q  137 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 236  Q
    |||| |||||| |||||||   |||||||||||||||||||||||||  ||||||||||||||||||||  |||  |||| || ||||||||||||||||    
T  17598554 gagtaatgatacatagacacccttaggtggcaatacatcttttgacacccacacaaaaatctgacacgttgtcacgtggaccccgcacaagcacactttc 17598653  T
Q  237 tct 239  Q
    |||    
T  17598654 tct 17598656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 11427640 - 11427720
Alignment:
Q  159 ttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 239  Q
    ||||||||||||||||| |||||||  ||||||||||||||||||||  |||  ||||||| |||||||||||||||||||    
T  11427640 ttaggtggcaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctct 11427720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 136 - 239
Target Start/End: Original strand, 31976247 - 31976350
Alignment:
Q  136 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 235  Q
    |||||||||||| ||||||||  ||||||||||||| | | ||| |||  ||||||||||||||||||||| ||| ||| | || |||||||||||||||    
T  31976247 agagttatgatacatagacatccttaggtggcaatataccctttaacacccacacaaaaatctgacacgtggtcacatgaaccccgcacaagcacacttt 31976346  T
Q  236 ctct 239  Q
    ||||    
T  31976347 ctct 31976350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 128 - 239
Target Start/End: Complemental strand, 23128236 - 23128125
Alignment:
Q  128 tttttaaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaag 227  Q
    ||||||||||| | |||||| |||||||  |||| |||  |||||||| |||||||  ||||||||||||||||||||  |||  |||||||  ||||||    
T  23128236 tttttaaaagaataatgatatatagacacctttatgtgataatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggatcccacacaag 23128137  T
Q  228 cacactttctct 239  Q
    ||||||||||||    
T  23128136 cacactttctct 23128125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 134 - 239
Target Start/End: Complemental strand, 30341463 - 30341358
Alignment:
Q  134 aaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacact 233  Q
    |||||||||||||| ||| |||   ||||||||||||||| |  ||||||  ||||||||||||||||| |||  |||||||| || ||||||| |||||    
T  30341463 aaagagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacact 30341364  T
Q  234 ttctct 239  Q
    ||||||    
T  30341363 ttctct 30341358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 127 - 239
Target Start/End: Original strand, 15832567 - 15832679
Alignment:
Q  127 atttttaaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaa 226  Q
    ||||| |||||||| |||||| |||||||  |||||||| ||||| ||| |||||||  ||||||||||| ||||||||  |||  ||||||||||||||    
T  15832567 attttcaaaagagtaatgatacatagacacctttaggtgacaataaatcatttgacacccacacaaaaatttgacacgtagtcacgtggatcctgcacaa 15832666  T
Q  227 gcacactttctct 239  Q
      ||| |||||||    
T  15832667 atacattttctct 15832679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 135 - 239
Target Start/End: Complemental strand, 15990144 - 15990040
Alignment:
Q  135 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactt 234  Q
    ||||||||||||| ||| |||   ||||||||||||||| |  ||||||  ||||||||||||||||| |||  |||||||| || ||||||| ||||||    
T  15990144 aagagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactt 15990045  T
Q  235 tctct 239  Q
    |||||    
T  15990044 tctct 15990040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 32869700 - 32869780
Alignment:
Q  159 ttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 239  Q
    ||||||||||||||| | |||||||  ||||||||||||||||||||  |||  |||| || |||||||||||||||||||    
T  32869700 ttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 32869780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 137 - 239
Target Start/End: Original strand, 4231548 - 4231650
Alignment:
Q  137 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 236  Q
    ||||||||||  ||| ||||  ||||||||||||||| |  ||| ||  |||||||||||||||||||||  |||||||| || ||||||| ||||||||    
T  4231548 gagttatgattcataaacatcattaggtggcaatacaccccttgccacccacacaaaaatctgacacgtggccatatggaccccgcacaagtacactttc 4231647  T
Q  237 tct 239  Q
    |||    
T  4231648 tct 4231650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 137 - 239
Target Start/End: Complemental strand, 15508124 - 15508022
Alignment:
Q  137 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 236  Q
    ||||||||||| ||| |||   ||||||||||||||| |  ||||||  ||||||||||||||||| |||  |||||||| || ||||||| ||||||||    
T  15508124 gagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttc 15508025  T
Q  237 tct 239  Q
    |||    
T  15508024 tct 15508022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 137 - 239
Target Start/End: Original strand, 29857827 - 29857929
Alignment:
Q  137 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 236  Q
    |||| |||||| |||||||  ||||| |||||||||| ||||| |||  ||||||||||||||||||||  | |  ||||||| ||| ||||||||||||    
T  29857827 gagtaatgatacatagacacctttagatggcaatacaccttttaacacccacacaaaaatctgacacgtagttacgtggatcccgcataagcacactttc 29857926  T
Q  237 tct 239  Q
    |||    
T  29857927 tct 29857929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 134 - 239
Target Start/End: Complemental strand, 6209568 - 6209463
Alignment:
Q  134 aaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacact 233  Q
    ||||||| |||||| |||||||   |||||||||||||||   ||||||| ||||||||||||||| |||||  |||  |||| || |||| ||||||||    
T  6209568 aaagagtaatgatacatagacacccttaggtggcaatacactatttgacactcacacaaaaatctgtcacgtagtcacgtggaccccgcactagcacact 6209469  T
Q  234 ttctct 239  Q
    ||||||    
T  6209468 ttctct 6209463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 239
Target Start/End: Complemental strand, 22880753 - 22880656
Alignment:
Q  142 atgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 239  Q
    |||||| |||||||   ||||||||||||||| | |||||||  ||||||||| ||||||||||  |||  |||| || |||||||||||||||||||    
T  22880753 atgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaattctgacacgtagtcacgtggaccccgcacaagcacactttctct 22880656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 137 - 205
Target Start/End: Complemental strand, 31109500 - 31109432
Alignment:
Q  137 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgt 205  Q
    |||| ||||| ||||||||   ||||||||||||||| | |||||||| ||||||||||||||||||||    
T  31109500 gagtaatgattaatagacacccttaggtggcaatacaccctttgacatccacacaaaaatctgacacgt 31109432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 239
Target Start/End: Original strand, 12732478 - 12732584
Alignment:
Q  133 aaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacac 232  Q
    |||||||| |||||| ||||||||| ||| ||||||||| |    ||||||  |||||||||||||||||||||   || |||||||  || |||||||     
T  12732478 aaaagagtaatgatacatagacattcttaagtggcaatataatcattgacacccacacaaaaatctgacacgtggctatgtggatcccacataagcacat 12732577  T
Q  233 tttctct 239  Q
    |||||||    
T  12732578 tttctct 12732584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 202
Target Start/End: Complemental strand, 22422119 - 22422053
Alignment:
Q  136 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgaca 202  Q
    ||||| |||||| ||||||||  ||||||||||||| |||| |||||| ||| |||||| |||||||    
T  22422119 agagtaatgatacatagacatccttaggtggcaatagatctcttgacactcatacaaaattctgaca 22422053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 239
Target Start/End: Complemental strand, 28536581 - 28536486
Alignment:
Q  142 atgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 239  Q
    |||||| ||| ||||  ||||||||||||||| |  ||||||  ||||||||||||||||||  | |||| |||| ||  ||||||||||||||||||    
T  28536581 atgatacataaacatccttaggtggcaatacaacccttgacacccacacaaaaatctgacac--ggtcatgtggaccccacacaagcacactttctct 28536486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 239
Target Start/End: Complemental strand, 31953130 - 31953028
Alignment:
Q  137 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 236  Q
    |||| |||||| ||||||||  ||||||||||||||| |  ||||||  |||| |||||||||||| ||| |||| |||| |   ||||| |||||||||    
T  31953130 gagtaatgatagatagacatccttaggtggcaatacaccccttgacacccacataaaaatctgacatgtgttcatgtggacctcacacaaacacactttc 31953031  T
Q  237 tct 239  Q
    |||    
T  31953030 tct 31953028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 65; Significance: 1e-28; HSPs: 32)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 131 - 239
Target Start/End: Complemental strand, 11348028 - 11347920
Alignment:
Q  131 ttaaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcac 230  Q
    ||||||||||||||||| ||||||||  ||||||| ||||||||| |||||||| |||||||||||||||||||||  || ||||| |||||| ||||||    
T  11348028 ttaaaagagttatgatacatagacatccttaggtgacaatacatcctttgacatccacacaaaaatctgacacgtggccacatggaccctgcataagcac 11347929  T
Q  231 actttctct 239  Q
    |||||||||    
T  11347928 actttctct 11347920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 137 - 239
Target Start/End: Complemental strand, 26141632 - 26141530
Alignment:
Q  137 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 236  Q
    ||||||||||| ||||||||  ||||||||||||||| | ||| |||  ||||||||||||||||||||| ||| ||||| ||  |||||||||||||||    
T  26141632 gagttatgatacatagacatccttaggtggcaatacaccctttaacacccacacaaaaatctgacacgtggtcacatggaccccacacaagcacactttc 26141533  T
Q  237 tct 239  Q
    |||    
T  26141532 tct 26141530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 137 - 239
Target Start/End: Original strand, 47531865 - 47531967
Alignment:
Q  137 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 236  Q
    ||||||||||| ||||||||  |||| |||||||||| ||||| |||| ||||||| |||||||||||||  |||||| | || ||||||||||||||||    
T  47531865 gagttatgatacatagacatccttagatggcaatacaccttttaacatccacacaagaatctgacacgtggccatatgaaccccgcacaagcacactttc 47531964  T
Q  237 tct 239  Q
    |||    
T  47531965 tct 47531967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 135 - 239
Target Start/End: Complemental strand, 27714993 - 27714889
Alignment:
Q  135 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactt 234  Q
    |||||| |||||| |||||||  ||||||||| |||||| | |||||||  ||||||||||||||||||||  |||| |||| || ||||||||||||||    
T  27714993 aagagtaatgatacatagacacctttaggtggtaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacactt 27714894  T
Q  235 tctct 239  Q
    |||||    
T  27714893 tctct 27714889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 135 - 239
Target Start/End: Complemental strand, 41189866 - 41189762
Alignment:
Q  135 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactt 234  Q
    ||||||||||||| ||| ||||  ||||||||||||||||| |||||||  |||| |||||| |||||||||  || ||||| || ||||||||||||||    
T  41189866 aagagttatgatacatatacatccttaggtggcaatacatcatttgacacccacataaaaatttgacacgtggccacatggaccccgcacaagcacactt 41189767  T
Q  235 tctct 239  Q
    |||||    
T  41189766 tctct 41189762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 133 - 239
Target Start/End: Original strand, 49607410 - 49607516
Alignment:
Q  133 aaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacac 232  Q
    |||||||| |||||| |||||||   ||||||||||||||| | |||||||  ||||||||||||||||||||  |||  |||||||  |||||||||||    
T  49607410 aaaagagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccacacaagcacac 49607509  T
Q  233 tttctct 239  Q
    |||||||    
T  49607510 tttctct 49607516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 136 - 239
Target Start/End: Original strand, 17470404 - 17470507
Alignment:
Q  136 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 235  Q
    ||||| |||||| |||||||  |||||||||||||||| ||||| |||  ||||||||||||||||||||  |||  |||| ||  ||||||||||||||    
T  17470404 agagtaatgatacatagacacctttaggtggcaatacaccttttaacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacacttt 17470503  T
Q  236 ctct 239  Q
    ||||    
T  17470504 ctct 17470507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 137 - 239
Target Start/End: Complemental strand, 51419460 - 51419358
Alignment:
Q  137 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 236  Q
    ||||||||||| ||||||||  |||| || ||||||||| ||| |||  |||||||||||||||||||||  || || || || ||||||||||||||||    
T  51419460 gagttatgatacatagacatccttagatgacaatacatcctttaacacccacacaaaaatctgacacgtggccacatagaccccgcacaagcacactttc 51419361  T
Q  237 tct 239  Q
    |||    
T  51419360 tct 51419358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 137 - 239
Target Start/End: Original strand, 53982011 - 53982113
Alignment:
Q  137 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 236  Q
    |||| |||||| |||||||   ||||||||||||||| | |||||||  ||||||||||||||||||||  |||  |||| || ||||||||||||||||    
T  53982011 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 53982110  T
Q  237 tct 239  Q
    |||    
T  53982111 tct 53982113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 26754717 - 26754797
Alignment:
Q  159 ttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 239  Q
    ||||||||||||||| | || ||||| ||||||||||||||||| ||| ||| ||||| || ||||||||||| |||||||    
T  26754717 ttaggtggcaatacacccttggacatccacacaaaaatctgacatgtggtcacatggaccccgcacaagcacattttctct 26754797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 135 - 239
Target Start/End: Complemental strand, 54868997 - 54868893
Alignment:
Q  135 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactt 234  Q
    |||||| |||||| |||||||   ||||||||||||||| |||||||||  ||||||||||||||||||||  | |  |||| || |||||| |||||||    
T  54868997 aagagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagttacgtggaccccgcacaatcacactt 54868898  T
Q  235 tctct 239  Q
    |||||    
T  54868897 tctct 54868893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 136 - 239
Target Start/End: Original strand, 8956761 - 8956864
Alignment:
Q  136 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 235  Q
    ||||| |||||| ||||||||  ||| ||||||||||||| |||||||  |||| |||||| ||||||||| |||| |||| | | |||||||||||||     
T  8956761 agagtaatgatacatagacatccttatgtggcaatacatcctttgacacccacataaaaatgtgacacgtgttcatgtggaccttacacaagcacacttc 8956860  T
Q  236 ctct 239  Q
    ||||    
T  8956861 ctct 8956864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 160 - 239
Target Start/End: Original strand, 31456712 - 31456791
Alignment:
Q  160 taggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 239  Q
    |||| ||||||||| | |||||||  ||||||||||||||||||||  |||| |||| || |||||||||||||||||||    
T  31456712 taggcggcaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacactttctct 31456791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 137 - 239
Target Start/End: Original strand, 33644200 - 33644302
Alignment:
Q  137 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 236  Q
    |||| |||||| |||||||   || |||||||||||| | |||||||  ||||||||||||||||||||  |||  |||| || ||||||||||||||||    
T  33644200 gagtaatgatacatagacacccttgggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 33644299  T
Q  237 tct 239  Q
    |||    
T  33644300 tct 33644302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 141 - 239
Target Start/End: Original strand, 52629304 - 52629402
Alignment:
Q  141 tatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 239  Q
    ||||||| |||||||   ||||||||||||||| | |||||||  ||||||||||||||||||||  |||  |||| || | |||||||||||||||||    
T  52629304 tatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcacactttctct 52629402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 135 - 239
Target Start/End: Original strand, 11907369 - 11907473
Alignment:
Q  135 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactt 234  Q
    ||||||||||||| |||||||   ||||||| |||||||    |  ||| |||||||||||||||||| ||| ||||||||| || ||||||||||| ||    
T  11907369 aagagttatgatacatagacacccttaggtgacaatacacacctgaacactcacacaaaaatctgacatgtggtcatatggaccccgcacaagcacattt 11907468  T
Q  235 tctct 239  Q
    |||||    
T  11907469 tctct 11907473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 191 - 239
Target Start/End: Complemental strand, 25407193 - 25407145
Alignment:
Q  191 aaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 239  Q
    |||||||||||||||||||||||||||||  ||||| ||||||||||||    
T  25407193 aaaaatctgacacgtgatcatatggatcccacacaaacacactttctct 25407145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 239
Target Start/End: Complemental strand, 24700055 - 24699952
Alignment:
Q  136 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 235  Q
    ||||| |||||| ||||||||  |||| |||||||||| |||||||||  |||| ||||||||| ||||||  ||  |||| |||| |||| ||||||||    
T  24700055 agagtaatgatacatagacatccttagttggcaatacaccttttgacacccacataaaaatctggcacgtggccacgtggaccctgtacaaacacacttt 24699956  T
Q  236 ctct 239  Q
    ||||    
T  24699955 ctct 24699952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 239
Target Start/End: Original strand, 35536625 - 35536728
Alignment:
Q  136 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 235  Q
    ||||| |||||| ||||||||  ||| ||||||||||| | |||||||  |||| |||||| ||||||||| |||| |||| | | |||||||||||||     
T  35536625 agagtaatgatacatagacatccttatgtggcaatacaccatttgacacccacataaaaatgtgacacgtggtcatgtggaccttacacaagcacacttc 35536724  T
Q  236 ctct 239  Q
    ||||    
T  35536725 ctct 35536728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 135 - 205
Target Start/End: Complemental strand, 11095455 - 11095385
Alignment:
Q  135 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgt 205  Q
    |||||| |||||| |||||||   ||||||||||||||| | |||||||  ||||||||||||||||||||    
T  11095455 aagagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgt 11095385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 137 - 239
Target Start/End: Complemental strand, 14623939 - 14623837
Alignment:
Q  137 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 236  Q
    |||| |||||| ||||||||  ||||||||||||||| |  ||||||  |||| |||||||||||| ||| |||| |||| |   |||||||||||||||    
T  14623939 gagtaatgatacatagacatccttaggtggcaatacaccccttgacacccacataaaaatctgacatgtgttcatgtggacctcacacaagcacactttc 14623840  T
Q  237 tct 239  Q
    |||    
T  14623839 tct 14623837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 137 - 239
Target Start/End: Complemental strand, 20765015 - 20764913
Alignment:
Q  137 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 236  Q
    ||||||||| | ||||||||  |||||||| ||||||   ||| |||  |||||||||||||||||||||  || ||||| || | ||||||||||||||    
T  20765015 gagttatgagacatagacatccttaggtggtaatacactctttaacacccacacaaaaatctgacacgtggccacatggaccccgtacaagcacactttc 20764916  T
Q  237 tct 239  Q
    |||    
T  20764915 tct 20764913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 239
Target Start/End: Complemental strand, 13898150 - 13898053
Alignment:
Q  142 atgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 239  Q
    |||||| ||| ||||  ||||||||||||||| |  ||||||  |||| |||||||||||||||| |||| |||| |   ||||||||||||||||||    
T  13898150 atgatagataaacatccttaggtggcaatacaccccttgacacccacataaaaatctgacacgtgttcatgtggacctcacacaagcacactttctct 13898053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 8076415 - 8076495
Alignment:
Q  159 ttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 239  Q
    |||||||||| |||| | |||||||  ||||||||||||| ||||||  |||  |||| || |||||||||||||||||||    
T  8076415 ttaggtggcagtacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacactttctct 8076495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 239
Target Start/End: Original strand, 9563029 - 9563101
Alignment:
Q  167 caatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 239  Q
    ||||||| | |||||||| || | |||||||||||||||  |||  |||||||||||||| ||||||||||||    
T  9563029 caatacaacctttgacatccatataaaaatctgacacgtagtcacgtggatcctgcacaaacacactttctct 9563101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 135 - 239
Target Start/End: Complemental strand, 33118953 - 33118849
Alignment:
Q  135 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactt 234  Q
    ||||||||||||| |||||||   ||||||| ||||||| | |||||||  ||||||||||| ||||||||  |||  |||||||  || || |||||||    
T  33118953 aagagttatgatacatagacacccttaggtgacaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggatccctcagaaacacactt 33118854  T
Q  235 tctct 239  Q
    |||||    
T  33118853 tctct 33118849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 135 - 211
Target Start/End: Original strand, 35093583 - 35093659
Alignment:
Q  135 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcat 211  Q
    |||||||| |||| |||||||  |||||||| ||||||| | |||||||| ||| ||||||||||||| ||| ||||    
T  35093583 aagagttacgatacatagacaactttaggtgacaatacaacatttgacatccacgcaaaaatctgacatgtggtcat 35093659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 36331407 - 36331327
Alignment:
Q  159 ttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 239  Q
    |||||||||||| || |  ||||||  ||||||||||||||||| |||  |||||||| || ||||||| |||||||||||    
T  36331407 ttaggtggcaatgcaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctct 36331327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 48587169 - 48587089
Alignment:
Q  159 ttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 239  Q
    ||||||||||||||| | |||||||   ||| |||||||||||||||  |||  ||||||| ||||||| |||||||||||    
T  48587169 ttaggtggcaatacaccctttgacacctacataaaaatctgacacgtagtcacgtggatcccgcacaagtacactttctct 48587089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 134 - 205
Target Start/End: Complemental strand, 36707527 - 36707456
Alignment:
Q  134 aaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgt 205  Q
    ||||||| |||||| ||||| |   ||||||| ||||||| | |||||||| ||||||||||||||||||||    
T  36707527 aaagagtaatgatacatagatacccttaggtgacaatacaccctttgacatccacacaaaaatctgacacgt 36707456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 195
Target Start/End: Complemental strand, 32606002 - 32605956
Alignment:
Q  149 atagacatttttaggtggcaatacatcttttgacattcacacaaaaa 195  Q
    ||||||| | ||||||||||||||||  |||||||||||||||||||    
T  32606002 atagacaatcttaggtggcaatacattctttgacattcacacaaaaa 32605956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 239
Target Start/End: Complemental strand, 45058652 - 45058551
Alignment:
Q  137 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 236  Q
    ||||||||||| ||| |||   ||||||||||||||| | || ||||  |||| |||||||||||| |||| |||||||| || ||||||| | ||||||    
T  45058652 gagttatgatacataaacacccttaggtggcaatacaccctt-gacacccacataaaaatctgacatgtgaccatatggaccccgcacaagtatactttc 45058554  T
Q  237 tct 239  Q
    |||    
T  45058553 tct 45058551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 64; Significance: 4e-28; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 132 - 239
Target Start/End: Original strand, 42257188 - 42257295
Alignment:
Q  132 taaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcaca 231  Q
    |||||||||||||||| |||||||| |||||||||||||||||| |||||||  |||| ||||||||||||||||  || ||||| || |||||||||||    
T  42257188 taaaagagttatgatacatagacatctttaggtggcaatacatcatttgacacccacataaaaatctgacacgtggccacatggaccccgcacaagcaca 42257287  T
Q  232 ctttctct 239  Q
    ||||||||    
T  42257288 ctttctct 42257295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 137 - 239
Target Start/End: Complemental strand, 40614002 - 40613900
Alignment:
Q  137 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 236  Q
    ||||||||||| ||||||||  ||||||||||||||| | |||||||  |||||||||||||||||||||  || ||||| || ||||||||||||||||    
T  40614002 gagttatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtggccacatggaccccgcacaagcacactttc 40613903  T
Q  237 tct 239  Q
    |||    
T  40613902 tct 40613900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 135 - 239
Target Start/End: Original strand, 9058478 - 9058582
Alignment:
Q  135 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactt 234  Q
    |||||| |||||| |||||||   ||||||||||||||| | |||||||  ||||||||||||||||||||  |||| |||| || ||||||||||||||    
T  9058478 aagagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacactt 9058577  T
Q  235 tctct 239  Q
    |||||    
T  9058578 tctct 9058582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 131 - 239
Target Start/End: Complemental strand, 38273248 - 38273140
Alignment:
Q  131 ttaaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcac 230  Q
    ||||||||||||||||| ||||||||| |||| |||||||||| | ||| |||  ||||||||||||||||||||   || ||||| || |||| |||||    
T  38273248 ttaaaagagttatgatacatagacattcttagatggcaatacaccctttaacacccacacaaaaatctgacacgtagccacatggaccccgcactagcac 38273149  T
Q  231 actttctct 239  Q
    |||||||||    
T  38273148 actttctct 38273140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 136 - 239
Target Start/End: Complemental strand, 5574589 - 5574486
Alignment:
Q  136 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 235  Q
    ||||| |||||| ||||||| | ||||||||||||||| | |||||||  |||| |||||||||||||||  |||  ||||||| |||||||||||||||    
T  5574589 agagtaatgatacatagacactcttaggtggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 5574490  T
Q  236 ctct 239  Q
    ||||    
T  5574489 ctct 5574486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 136 - 239
Target Start/End: Original strand, 33436210 - 33436313
Alignment:
Q  136 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 235  Q
    ||||| |||||| ||||||||  |||| |||||||||| |||||||||  |||| ||||||||||||||||| ||| ||||   ||||||||||||||||    
T  33436210 agagtaatgatacatagacatccttagatggcaatacaccttttgacacccacataaaaatctgacacgtgaccatgtggactttgcacaagcacacttt 33436309  T
Q  236 ctct 239  Q
    ||||    
T  33436310 ctct 33436313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 133 - 239
Target Start/End: Complemental strand, 45097839 - 45097733
Alignment:
Q  133 aaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacac 232  Q
    ||||||||||||||| ||| ||||  |||||||||||||||||  ||||||  || |||||||||||||| |||  |||||||| || ||||||| ||||    
T  45097839 aaaagagttatgatacataaacatccttaggtggcaatacatcccttgacacccatacaaaaatctgacatgtggccatatggaccccgcacaagtacac 45097740  T
Q  233 tttctct 239  Q
    |||||||    
T  45097739 tttctct 45097733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 142 - 239
Target Start/End: Complemental strand, 19930915 - 19930818
Alignment:
Q  142 atgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 239  Q
    |||||| |||||||   ||||||||||||||| | |||||||| ||||||||||||||||||||  |||| |||| || |||||| ||||||||||||    
T  19930915 atgatacatagacacccttaggtggcaatacaccctttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaaacacactttctct 19930818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 135 - 239
Target Start/End: Complemental strand, 10249484 - 10249380
Alignment:
Q  135 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactt 234  Q
    |||||| |||||| |||||||   ||||||| ||||||| |||||||||  ||||||||||||||||||||  |||  |||| || ||||||||||||||    
T  10249484 aagagtaatgatacatagacacccttaggtgacaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 10249385  T
Q  235 tctct 239  Q
    |||||    
T  10249384 tctct 10249380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 132 - 239
Target Start/End: Complemental strand, 33436205 - 33436098
Alignment:
Q  132 taaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcaca 231  Q
    ||||||||| |||||| |||||||   ||||||||||||||| | |||||||  ||||||||||||| ||||||  |||  |||| || |||||||||||    
T  33436205 taaaagagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcaca 33436106  T
Q  232 ctttctct 239  Q
    ||||||||    
T  33436105 ctttctct 33436098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 137 - 239
Target Start/End: Original strand, 13438343 - 13438445
Alignment:
Q  137 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 236  Q
    |||| |||||| |||||||   ||||||| ||||||||| |||||||  ||||||||||||||||||||  |||  |||| || ||||||||||||||||    
T  13438343 gagtaatgatacatagacacccttaggtgacaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 13438442  T
Q  237 tct 239  Q
    |||    
T  13438443 tct 13438445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 137 - 239
Target Start/End: Original strand, 17473020 - 17473122
Alignment:
Q  137 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 236  Q
    |||| |||||| |||||||   |||| |||||||||| | |||||||  ||||||||||||||||||||  |||  ||||||| ||||||||||||||||    
T  17473020 gagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 17473119  T
Q  237 tct 239  Q
    |||    
T  17473120 tct 17473122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 137 - 239
Target Start/End: Original strand, 27864704 - 27864806
Alignment:
Q  137 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 236  Q
    |||| |||||| |||||||   ||| ||||||||||| | |||||||| |||||||||||||||||||| ||||  |||| || ||| ||||||||||||    
T  27864704 gagtaatgatacatagacacccttatgtggcaatacaccctttgacatccacacaaaaatctgacacgtaatcacgtggaccccgcaaaagcacactttc 27864803  T
Q  237 tct 239  Q
    |||    
T  27864804 tct 27864806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 137 - 239
Target Start/End: Complemental strand, 28381755 - 28381653
Alignment:
Q  137 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 236  Q
    |||| |||||| |||||||   ||||||||||||||| |||| ||||  ||||||||||||||||||||  ||| |||||  | ||||||||||||||||    
T  28381755 gagtaatgatacatagacacccttaggtggcaatacacctttcgacacccacacaaaaatctgacacgtagtcacatggactccgcacaagcacactttc 28381656  T
Q  237 tct 239  Q
    |||    
T  28381655 tct 28381653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 142 - 239
Target Start/End: Original strand, 28863460 - 28863557
Alignment:
Q  142 atgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 239  Q
    |||||| |||||||   ||||||||||||||| | |||||||  ||||||||||||||||||||  |||  |||| || |||||||||||||||||||    
T  28863460 atgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 28863557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 136 - 237
Target Start/End: Complemental strand, 32505749 - 32505648
Alignment:
Q  136 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 235  Q
    ||||| |||||| |||||||   ||||||| ||||||| |||||||||  ||||||||||||||||||||  |||  |||| || |||||||||||||||    
T  32505749 agagtaatgatacatagacacccttaggtgacaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 32505650  T
Q  236 ct 237  Q
    ||    
T  32505649 ct 32505648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 137 - 237
Target Start/End: Original strand, 4060685 - 4060785
Alignment:
Q  137 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 236  Q
    |||| |||||| |||||||   ||||||| ||||||| |||||||||| ||||||||||||||||||||  | |  ||||||| ||| ||||||||||||    
T  4060685 gagtaatgatacatagacacccttaggtgacaatacaccttttgacatccacacaaaaatctgacacgtagttacgtggatcccgcataagcacactttc 4060784  T
Q  237 t 237  Q
    |    
T  4060785 t 4060785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 136 - 235
Target Start/End: Original strand, 2533123 - 2533221
Alignment:
Q  136 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 235  Q
    |||||||||||| ||||||||  ||| ||||||||||||| |||||||  ||||||||||||||||||||   || || || || |||||||||||||||    
T  2533123 agagttatgatacatagacatccttaagtggcaatacatcctttgaca-ccacacaaaaatctgacacgtagccacatagaccccgcacaagcacacttt 2533221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 137 - 239
Target Start/End: Original strand, 38732354 - 38732456
Alignment:
Q  137 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 236  Q
    ||||||||||| ||| |||   ||| ||| |||||||||  ||||||  ||||||||||||||||| ||| ||||||||| || ||||||| ||||||||    
T  38732354 gagttatgatacataaacacccttatgtgacaatacatcccttgacacccacacaaaaatctgacatgtggtcatatggaccccgcacaagtacactttc 38732453  T
Q  237 tct 239  Q
    |||    
T  38732454 tct 38732456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 137 - 239
Target Start/End: Original strand, 40701478 - 40701580
Alignment:
Q  137 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 236  Q
    |||| |||||| |||||||   ||||||||||||||| |||||||||  ||||||||||||||||||||  | |  |||| || |||||| |||||||||    
T  40701478 gagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagttacgtggaccccgcacaatcacactttc 40701577  T
Q  237 tct 239  Q
    |||    
T  40701578 tct 40701580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 142 - 239
Target Start/End: Original strand, 41575142 - 41575240
Alignment:
Q  142 atgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatgga-tcctgcacaagcacactttctct 239  Q
    |||||| ||||||||  |||| ||| |||||| | |||||||||||||||||||| ||||| ||| |||| ||||  ||| ||||||||||||||||||    
T  41575142 atgatacatagacatccttagatggtaatacaccctttgacattcacacaaaaatttgacatgtggtcatgtggacccctacacaagcacactttctct 41575240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 2997565 - 2997485
Alignment:
Q  159 ttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 239  Q
    ||||||||||||||| |  ||||||  ||||||||||||||||| |||  |||||||| || ||||||| |||||||||||    
T  2997565 ttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctct 2997485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 239
Target Start/End: Complemental strand, 7465836 - 7465733
Alignment:
Q  136 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 235  Q
    ||||| |||||| |||||||   |||| |||||||||| | |||||||  ||||||||||||||||||||  |||  |||| ||  ||||||||||||||    
T  7465836 agagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacacttt 7465737  T
Q  236 ctct 239  Q
    ||||    
T  7465736 ctct 7465733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 132 - 239
Target Start/End: Original strand, 20700810 - 20700917
Alignment:
Q  132 taaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcaca 231  Q
    ||||||||| |||||| ||||||||  ||| ||||||||||| | ||||||    |||||||||||||||||||  |||  |||| || ||| |||||||    
T  20700810 taaaagagtaatgatacatagacatccttatgtggcaatacaccctttgactcctacacaaaaatctgacacgtagtcacgtggaccccgcataagcaca 20700909  T
Q  232 ctttctct 239  Q
    ||||||||    
T  20700910 ctttctct 20700917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 239
Target Start/End: Original strand, 36168835 - 36168938
Alignment:
Q  136 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 235  Q
    |||||||||||| ||||||||  |||| || ||||||||| ||| ||   ||||||||||| |||||||||  || ||||| || ||||||||| |||||    
T  36168835 agagttatgatacatagacatccttagatgacaatacatcctttaactcccacacaaaaatttgacacgtggccacatggaccccgcacaagcatacttt 36168934  T
Q  236 ctct 239  Q
    ||||    
T  36168935 ctct 36168938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 239
Target Start/End: Original strand, 13365402 - 13365455
Alignment:
Q  186 cacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 239  Q
    ||||||||||||||||| |||| |||||||| || ||||||| |||||||||||    
T  13365402 cacacaaaaatctgacatgtgaccatatggaccccgcacaagtacactttctct 13365455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 135 - 239
Target Start/End: Original strand, 30915461 - 30915565
Alignment:
Q  135 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactt 234  Q
    |||||| |||||| |||||||   ||||||||||||||| | ||||||   |||| |||||||||||||||  |||  |||| || | ||||||||||||    
T  30915461 aagagtaatgatacatagacacccttaggtggcaatacaccctttgacccccacataaaaatctgacacgtagtcacgtggaccccgtacaagcacactt 30915560  T
Q  235 tctct 239  Q
    |||||    
T  30915561 tctct 30915565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 134 - 205
Target Start/End: Complemental strand, 38882916 - 38882846
Alignment:
Q  134 aaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgt 205  Q
    ||||||| |||||| |||||||   ||||||||||||| | | |||||||| ||||||||||||||||||||    
T  38882916 aaagagtaatgatacatagacacccttaggtggcaata-accctttgacatccacacaaaaatctgacacgt 38882846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 235
Target Start/End: Original strand, 43490121 - 43490219
Alignment:
Q  137 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 235  Q
    ||||||||||| ||| |||   ||||||| ||||||| |  ||||||  ||||||||||||||||| |||  |||||||| || ||||||| |||||||    
T  43490121 gagttatgatacataaacacccttaggtgacaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacacttt 43490219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 137 - 202
Target Start/End: Complemental strand, 17820104 - 17820039
Alignment:
Q  137 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgaca 202  Q
    ||||||||||| |||||||  | |||||||||||||| |  ||||||  |||||||||||||||||    
T  17820104 gagttatgatacatagacaactataggtggcaatacaccccttgacacccacacaaaaatctgaca 17820039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 239
Target Start/End: Complemental strand, 3035033 - 3034981
Alignment:
Q  187 acacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 239  Q
    |||||||||||||||| ||| ||||||||| || ||||||| | |||||||||    
T  3035033 acacaaaaatctgacatgtggtcatatggaccccgcacaagtatactttctct 3034981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 239
Target Start/End: Original strand, 3154193 - 3154245
Alignment:
Q  187 acacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 239  Q
    |||||||||||||||||||| ||| |||||||| || ||| |||| |||||||    
T  3154193 acacaaaaatctgacacgtggtcacatggatcccgcccaaacacagtttctct 3154245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 60; Significance: 1e-25; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 136 - 239
Target Start/End: Original strand, 6679697 - 6679800
Alignment:
Q  136 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 235  Q
    |||||||||||| |||||||| |||||||||||||||| |||||||||  ||||||||||||||||||||| ||| ||||| || |||||| |||| |||    
T  6679697 agagttatgatacatagacatctttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtggtcacatggaccccgcacaaacacatttt 6679796  T
Q  236 ctct 239  Q
    ||||    
T  6679797 ctct 6679800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 137 - 239
Target Start/End: Original strand, 28177775 - 28177877
Alignment:
Q  137 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 236  Q
    ||||||||||| ||||||||  ||||||||||||||| | |||||||  ||||||||||||||||||||| ||| ||||| || |||||| |||||||||    
T  28177775 gagttatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtggtcacatggaccccgcacaaacacactttc 28177874  T
Q  237 tct 239  Q
    |||    
T  28177875 tct 28177877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 136 - 239
Target Start/End: Original strand, 2740273 - 2740376
Alignment:
Q  136 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 235  Q
    ||||| |||||| ||||||||  ||||||||||||||| | |||||||  ||||||||||||||||||||  |||  ||||||| |||||||||||||||    
T  2740273 agagtaatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 2740372  T
Q  236 ctct 239  Q
    ||||    
T  2740373 ctct 2740376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 133 - 239
Target Start/End: Original strand, 13811648 - 13811754
Alignment:
Q  133 aaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacac 232  Q
    |||||||| | |||| |||||||   ||||||||||||||||| |||||||  ||||||||||||||||||||  |||  |||| || ||||||||||||    
T  13811648 aaaagagtaaagatacatagacacccttaggtggcaatacatcatttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacac 13811747  T
Q  233 tttctct 239  Q
    |||||||    
T  13811748 tttctct 13811754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 137 - 239
Target Start/End: Original strand, 26720516 - 26720618
Alignment:
Q  137 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 236  Q
    ||||||||||| ||||||||  ||||||||||||||| | ||| |||   ||| ||||||||||||||||  || |||||||| ||||||||||||||||    
T  26720516 gagttatgatacatagacatccttaggtggcaatacaccctttaacacctacaaaaaaatctgacacgtggccacatggatcccgcacaagcacactttc 26720615  T
Q  237 tct 239  Q
    |||    
T  26720616 tct 26720618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 137 - 239
Target Start/End: Original strand, 26990265 - 26990367
Alignment:
Q  137 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 236  Q
    ||||||||||| ||||||||  ||||||||||||||| | ||| |||   ||| ||||||||||||||||  || |||||||| ||||||||||||||||    
T  26990265 gagttatgatacatagacatccttaggtggcaatacaccctttaacacctacaaaaaaatctgacacgtggccacatggatcccgcacaagcacactttc 26990364  T
Q  237 tct 239  Q
    |||    
T  26990365 tct 26990367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 137 - 239
Target Start/End: Complemental strand, 35943992 - 35943890
Alignment:
Q  137 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 236  Q
    ||||||||||| |||||||   ||||||||||||||||| |||||||  ||||||||||||||||||||  | |  |||||||  |||||||||||||||    
T  35943992 gagttatgatacatagacacccttaggtggcaatacatcatttgacacccacacaaaaatctgacacgtagttacgtggatcccacacaagcacactttc 35943893  T
Q  237 tct 239  Q
    |||    
T  35943892 tct 35943890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 137 - 237
Target Start/End: Original strand, 14831814 - 14831914
Alignment:
Q  137 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 236  Q
    |||| |||||| ||||||| | ||||||||||||||| | |||||||  |||| |||||||||||||||  |||  ||||||| ||||||||||||||||    
T  14831814 gagtaatgatacatagacactcttaggtggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 14831913  T
Q  237 t 237  Q
    |    
T  14831914 t 14831914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 135 - 239
Target Start/End: Complemental strand, 15409712 - 15409608
Alignment:
Q  135 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactt 234  Q
    ||||||||||||| ||||||||  ||||||| ||||||||  |||||||  ||||||||||||||||||||   || ||||| || |||||||||||||     
T  15409712 aagagttatgatacatagacatccttaggtgacaatacattctttgacacccacacaaaaatctgacacgtagccacatggaccccgcacaagcacactc 15409613  T
Q  235 tctct 239  Q
    |||||    
T  15409612 tctct 15409608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 136 - 239
Target Start/End: Complemental strand, 2252269 - 2252166
Alignment:
Q  136 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 235  Q
    |||||||||||| ||| ||||  ||||||||||||||| |  ||||||  ||||||||||||||||| |||  |||||||| || ||||||| |||||||    
T  2252269 agagttatgatacataaacatccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacacttt 2252170  T
Q  236 ctct 239  Q
    ||||    
T  2252169 ctct 2252166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 133 - 239
Target Start/End: Complemental strand, 18520988 - 18520882
Alignment:
Q  133 aaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacac 232  Q
    |||||| | |||||| |||||||   ||||||||||||||| | |||||||  ||||||||||||||||||||  |||  |||| || ||||||||||||    
T  18520988 aaaagaataatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacac 18520889  T
Q  233 tttctct 239  Q
    |||||||    
T  18520888 tttctct 18520882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 137 - 239
Target Start/End: Original strand, 35785199 - 35785301
Alignment:
Q  137 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 236  Q
    |||| |||||| |||||||   ||||||||||||||| |||||||||  ||||||||||||||||||||  | |  ||||||| |||||| |||||||||    
T  35785199 gagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagttacgtggatcccgcacaatcacactttc 35785298  T
Q  237 tct 239  Q
    |||    
T  35785299 tct 35785301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 137 - 239
Target Start/End: Original strand, 40145407 - 40145509
Alignment:
Q  137 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 236  Q
    |||| |||||| |||||||   ||||||||||||||| | ||| |||| ||||||||||||||||||||  |||  |||| || ||||||||||||||||    
T  40145407 gagtaatgatacatagacacccttaggtggcaatacaccctttaacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 40145506  T
Q  237 tct 239  Q
    |||    
T  40145507 tct 40145509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 134 - 239
Target Start/End: Complemental strand, 3921368 - 3921263
Alignment:
Q  134 aaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacact 233  Q
    |||||||||||||| ||| |||   ||||||||||||||| |  ||||||  ||||||||||||||||| |||  |||||||| || ||||||| |||||    
T  3921368 aaagagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacact 3921269  T
Q  234 ttctct 239  Q
    ||||||    
T  3921268 ttctct 3921263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 133 - 237
Target Start/End: Original strand, 31008984 - 31009088
Alignment:
Q  133 aaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacac 232  Q
    ||||||||||||||| ||| ||||  ||||||| ||||||||  ||  |||  ||||||||||||||||||||  |||  ||||||| ||||||||||||    
T  31008984 aaaagagttatgatacataaacatccttaggtgacaatacattcttccacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacac 31009083  T
Q  233 tttct 237  Q
    |||||    
T  31009084 tttct 31009088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 160 - 235
Target Start/End: Complemental strand, 42414379 - 42414304
Alignment:
Q  160 taggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 235  Q
    |||||||||||||| | |||||||  ||||||||||||||||||||  |||| |||| || |||||||||||||||    
T  42414379 taggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacacttt 42414304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 137 - 239
Target Start/End: Complemental strand, 33149738 - 33149636
Alignment:
Q  137 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 236  Q
    |||| |||||| |||||||   |||||||| |||||| | |||||||  ||||||||||| ||||||||  |||  ||||||| ||||||||||||||||    
T  33149738 gagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggatcccgcacaagcacactttc 33149639  T
Q  237 tct 239  Q
    |||    
T  33149638 tct 33149636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 137 - 237
Target Start/End: Complemental strand, 20073616 - 20073516
Alignment:
Q  137 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 236  Q
    |||| |||||| ||||||||  |||| || ||||||| | ||||||| ||||| ||||||||  ||||||| ||  |||| |||||||||||||||||||    
T  20073616 gagtaatgatatatagacatcattagatgacaatacaccctttgacactcacataaaaatcttgcacgtgaccacgtggaccctgcacaagcacactttc 20073517  T
Q  237 t 237  Q
    |    
T  20073516 t 20073516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 135 - 239
Target Start/End: Complemental strand, 36733044 - 36732940
Alignment:
Q  135 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactt 234  Q
    |||||| |||||| |||||||   |||||| |||||||| | |||||||  |||||||||||||||||| |  |||  |||| || ||||||||||||||    
T  36733044 aagagtaatgatacatagacacccttaggtagcaatacaccctttgacacccacacaaaaatctgacacatagtcacgtggaccccgcacaagcacactt 36732945  T
Q  235 tctct 239  Q
    |||||    
T  36732944 tctct 36732940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 239
Target Start/End: Complemental strand, 39557594 - 39557515
Alignment:
Q  160 taggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 239  Q
    ||||||| |||||| || || |||| ||||||||||||||||||||||||| ||||| ||   |||| ||||||||||||    
T  39557594 taggtggtaatacacctcttaacatccacacaaaaatctgacacgtgatcacatggaccccatacaatcacactttctct 39557515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 149 - 239
Target Start/End: Complemental strand, 33825412 - 33825322
Alignment:
Q  149 atagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 239  Q
    ||||||||| |||||||||||||||    ||||||  |||| |||||||||||||||| |||| || | | | ||||||||||||||||||    
T  33825412 atagacattcttaggtggcaatacactccttgacacccacataaaaatctgacacgtgttcatgtgaaccttacacaagcacactttctct 33825322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 135 - 239
Target Start/End: Complemental strand, 39688999 - 39688895
Alignment:
Q  135 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactt 234  Q
    ||||||||||||| ||| |||   ||| |||||||||||||  ||||||  ||||||||||||||| | ||| ||||||| | || ||| ||| ||||||    
T  39688999 aagagttatgatacataaacacccttaagtggcaatacatcccttgacacccacacaaaaatctgatatgtggtcatatgaaccccgcataagtacactt 39688900  T
Q  235 tctct 239  Q
    |||||    
T  39688899 tctct 39688895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 136 - 205
Target Start/End: Complemental strand, 41470517 - 41470448
Alignment:
Q  136 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgt 205  Q
    ||||| || ||| |||||||  |||||||||||||||||| ||| | ||||| | |||||||||||||||    
T  41470517 agagtaataatacatagacacctttaggtggcaatacatcctttaaaattcatataaaaatctgacacgt 41470448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 211
Target Start/End: Original strand, 16327923 - 16327975
Alignment:
Q  159 ttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcat 211  Q
    |||||||||||||||||  ||||||  |||| |||||||||||||||| ||||    
T  16327923 ttaggtggcaatacatccattgacacccacataaaaatctgacacgtgttcat 16327975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 58; Significance: 2e-24; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 134 - 239
Target Start/End: Original strand, 32813244 - 32813349
Alignment:
Q  134 aaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacact 233  Q
    |||||||||||||| ||||||||  ||||||||||||||| | ||| |||  ||||||||||||||||||||| ||| ||||| || |||||||||||||    
T  32813244 aaagagttatgatacatagacatccttaggtggcaatacaccctttaacacccacacaaaaatctgacacgtggtcacatggaccccgcacaagcacact 32813343  T
Q  234 ttctct 239  Q
    ||||||    
T  32813344 ttctct 32813349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 137 - 239
Target Start/End: Complemental strand, 27564835 - 27564733
Alignment:
Q  137 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 236  Q
    |||| |||||| ||||||||  ||||||||||||||| |||||||||  |||||||||||||||||||| ||||  |||| || ||||||||||||||||    
T  27564835 gagtaatgatacatagacatccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcacactttc 27564736  T
Q  237 tct 239  Q
    |||    
T  27564735 tct 27564733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 136 - 237
Target Start/End: Complemental strand, 51898784 - 51898683
Alignment:
Q  136 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 235  Q
    ||||| |||||| |||||||| |||||||||||||||| | |||||||  ||||||||||||||||||||  |||  ||||||| |||||||||||||||    
T  51898784 agagtaatgatacatagacatctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 51898685  T
Q  236 ct 237  Q
    ||    
T  51898684 ct 51898683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 136 - 239
Target Start/End: Complemental strand, 37926539 - 37926436
Alignment:
Q  136 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 235  Q
    |||||||||||| ||||| || |||||||||||||||||||||| |||  |||| ||||||||||||||||  || |||||||| | ||||| |||||||    
T  37926539 agagttatgatacatagatatctttaggtggcaatacatcttttaacacccacataaaaatctgacacgtggccacatggatcccgtacaagtacacttt 37926440  T
Q  236 ctct 239  Q
    ||||    
T  37926439 ctct 37926436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 133 - 239
Target Start/End: Complemental strand, 8346492 - 8346386
Alignment:
Q  133 aaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacac 232  Q
    |||||||| |||||| |||| ||  |||||||||||||||| | |||||||  ||||||||||||||||||||  |||  |||| |||||||||||||||    
T  8346492 aaaagagtaatgatacatagtcacctttaggtggcaatacaccatttgacacccacacaaaaatctgacacgtagtcacgtggaccctgcacaagcacac 8346393  T
Q  233 tttctct 239  Q
    |||||||    
T  8346392 tttctct 8346386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 135 - 239
Target Start/End: Complemental strand, 49811629 - 49811525
Alignment:
Q  135 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactt 234  Q
    ||||||||||||| ||||||||  ||||||| ||||||| | |||||||| ||||||||||||||||||||   ||||| ||  | ||||||||||||||    
T  49811629 aagagttatgatagatagacatccttaggtgacaatacaccatttgacatccacacaaaaatctgacacgtagccatatagactccgcacaagcacactt 49811530  T
Q  235 tctct 239  Q
    |||||    
T  49811529 tctct 49811525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 133 - 239
Target Start/End: Complemental strand, 5959104 - 5958998
Alignment:
Q  133 aaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacac 232  Q
    ||||||||||||||| ||| |||   ||| ||||||||||| || ||||||  ||||||||||||||||| ||| ||||||||| || ||||||| ||||    
T  5959104 aaaagagttatgatacataaacacccttaagtggcaatacacctcttgacacccacacaaaaatctgacatgtggtcatatggaccccgcacaagtacac 5959005  T
Q  233 tttctct 239  Q
    |||||||    
T  5959004 tttctct 5958998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 142 - 239
Target Start/End: Complemental strand, 44548471 - 44548374
Alignment:
Q  142 atgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 239  Q
    |||||| |||||||| |||||||||||||||| | ||||| |  ||||||||||||||||||||  |||  |||| || |||||||||||||||||||    
T  44548471 atgatacatagacatctttaggtggcaatacaccatttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 44548374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 132 - 236
Target Start/End: Original strand, 37649193 - 37649297
Alignment:
Q  132 taaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcaca 231  Q
    |||| |||| |||||| |||||||| ||||||||||||||||   |||||||  ||||||||||||||||||||| |||  || || | |||||||||||    
T  37649193 taaatgagtaatgatacatagacatctttaggtggcaatacactctttgacacccacacaaaaatctgacacgtggtcacgtgaattccgcacaagcaca 37649292  T
Q  232 ctttc 236  Q
    |||||    
T  37649293 ctttc 37649297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 135 - 235
Target Start/End: Complemental strand, 38632423 - 38632323
Alignment:
Q  135 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactt 234  Q
    |||||| |||||| |||||||   ||||||||||||||| ||||| |||| ||||||||||||||||||||  |||  |||| || ||||||||||||||    
T  38632423 aagagtaatgatacatagacacccttaggtggcaatacaccttttaacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 38632324  T
Q  235 t 235  Q
    |    
T  38632323 t 38632323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 134 - 237
Target Start/End: Original strand, 2581912 - 2582015
Alignment:
Q  134 aaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacact 233  Q
    ||||||| |||||| |||||||   ||||||||||||||| | |||||||  ||||||||||||||||||||  |||  |||| || |||||||||||||    
T  2581912 aaagagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacact 2582011  T
Q  234 ttct 237  Q
    ||||    
T  2582012 ttct 2582015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 133 - 239
Target Start/End: Original strand, 38595150 - 38595256
Alignment:
Q  133 aaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacac 232  Q
    |||||||| |||||| ||| |||  |||||||||||||||| | |||||||  ||||||||||||||||||||  |||  |||| || | ||||||||||    
T  38595150 aaaagagtaatgatacataaacacctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcacac 38595249  T
Q  233 tttctct 239  Q
    |||||||    
T  38595250 tttctct 38595256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 137 - 239
Target Start/End: Complemental strand, 41608593 - 41608491
Alignment:
Q  137 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 236  Q
    ||||||||||| ||| ||||  ||||||||||||||| |  |||||| |||||||||||||||||| |||  |||||||| || | ||||| ||||||||    
T  41608593 gagttatgatacataaacatccttaggtggcaatacaccccttgacactcacacaaaaatctgacatgtggccatatggaccccgtacaagtacactttc 41608494  T
Q  237 tct 239  Q
    |||    
T  41608493 tct 41608491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 137 - 235
Target Start/End: Complemental strand, 48716382 - 48716284
Alignment:
Q  137 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 235  Q
    |||| |||||| |||||||   ||||||||||||||| | |||||||| ||||||||||||||||||||  |||  |||| || |||||||||||||||    
T  48716382 gagtaatgatacatagacacccttaggtggcaatacaccatttgacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 48716284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 131 - 239
Target Start/End: Original strand, 26440728 - 26440836
Alignment:
Q  131 ttaaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcac 230  Q
    ||||| |||||| |||| ||||||||  |||| || ||||||| | ||| |||  |||||||||||||||||||||  || |||||||| ||| ||||||    
T  26440728 ttaaatgagttaggatagatagacatccttagatgacaatacaccctttaacacccacacaaaaatctgacacgtggccacatggatcccgcataagcac 26440827  T
Q  231 actttctct 239  Q
    |||||||||    
T  26440828 actttctct 26440836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 137 - 239
Target Start/End: Original strand, 43132 - 43234
Alignment:
Q  137 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 236  Q
    |||| |||||| ||||||| | ||||| | ||||||||| |||||||  ||||||||||||||||||||  |||  ||||  | ||||||||||||||||    
T  43132 gagtaatgatacatagacagtcttaggagacaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggactccgcacaagcacactttc 43231  T
Q  237 tct 239  Q
    |||    
T  43232 tct 43234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 137 - 239
Target Start/End: Complemental strand, 9474976 - 9474874
Alignment:
Q  137 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 236  Q
    |||| |||||| |||||||   ||||||||||||||| | |||||||  ||||||||||||||||||||  |||  |||| || |||||| |||||||||    
T  9474976 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaaacacactttc 9474877  T
Q  237 tct 239  Q
    |||    
T  9474876 tct 9474874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 137 - 239
Target Start/End: Complemental strand, 47452420 - 47452318
Alignment:
Q  137 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 236  Q
    |||| |||||| |||||||   |||||||| |||||| | |||||||  ||||||||||||| ||||||  |||  ||||||| ||||||||||||||||    
T  47452420 gagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggatcccgcacaagcacactttc 47452321  T
Q  237 tct 239  Q
    |||    
T  47452320 tct 47452318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 137 - 239
Target Start/End: Complemental strand, 50591100 - 50590998
Alignment:
Q  137 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 236  Q
    ||||||||||| ||| |||   ||||||||||||||| |  ||||||  ||||||||||||||||| |||  |||||||| || ||||||| ||||||||    
T  50591100 gagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttc 50591001  T
Q  237 tct 239  Q
    |||    
T  50591000 tct 50590998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 235
Target Start/End: Original strand, 26274437 - 26274530
Alignment:
Q  142 atgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 235  Q
    |||||| |||||||   ||| ||||||||||||| |||||||| |||| ||||||||||||| |  |||  ||||||||||||||| |||||||    
T  26274437 atgatacatagacacccttatgtggcaatacatcatttgacatccacagaaaaatctgacacatagtcacgtggatcctgcacaagtacacttt 26274530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 138 - 235
Target Start/End: Original strand, 44453980 - 44454077
Alignment:
Q  138 agttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 235  Q
    |||||||||| |||||||  |||| |||||||||||||| |||| |  ||||||||||||||||| ||| | |  |||||||  ||||||||||||||    
T  44453980 agttatgatacatagacacctttaagtggcaatacatctcttgatacccacacaaaaatctgacatgtggttacgtggatcccacacaagcacacttt 44454077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 3000341 - 3000421
Alignment:
Q  159 ttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 239  Q
    ||||||||||||||| | |||||||  ||||||||||||||||||||  |||  |||| || | |||||||||||||||||    
T  3000341 ttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcacactttctct 3000421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 50630480 - 50630560
Alignment:
Q  159 ttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 239  Q
    ||||||||||||||||| ||||  |  ||||||||||||||||||||  |||  |||| || |||||||||||||||||||    
T  50630480 ttaggtggcaatacatcctttgttacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 50630560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 239
Target Start/End: Original strand, 41758832 - 41758907
Alignment:
Q  164 tggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 239  Q
    |||||||||| | |||||||  ||||||||||||||||||||  ||| ||||| || |||||| ||||||||||||    
T  41758832 tggcaatacaccctttgacaaccacacaaaaatctgacacgtagtcacatggaccccgcacaaacacactttctct 41758907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 159 - 237
Target Start/End: Complemental strand, 11152456 - 11152378
Alignment:
Q  159 ttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttct 237  Q
    ||||||||||||||| | || ||||| ||||||||||||||||||||  |||| | || || |||||||||| ||||||    
T  11152456 ttaggtggcaatacacccttcgacatccacacaaaaatctgacacgtagtcatgtagaccccgcacaagcacgctttct 11152378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 186 - 237
Target Start/End: Complemental strand, 3302584 - 3302533
Alignment:
Q  186 cacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttct 237  Q
    |||||||||||||||||||| |||||||||| ||   |||||||||||||||    
T  3302584 cacacaaaaatctgacacgtaatcatatggaccccatacaagcacactttct 3302533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 180 - 237
Target Start/End: Original strand, 48489343 - 48489400
Alignment:
Q  180 gacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttct 237  Q
    ||||| ||||||||||||||||| ||| |||  ||||||| ||||||||||| |||||    
T  48489343 gacatccacacaaaaatctgacatgtggtcacgtggatcccgcacaagcacattttct 48489400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 206
Target Start/End: Complemental strand, 23597194 - 23597122
Alignment:
Q  134 aaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtg 206  Q
    ||||||| |||||| ||||||||  |||||||||||||||   ||||| |  |||| ||||||||||||||||    
T  23597194 aaagagtaatgatacatagacatcattaggtggcaatacactctttgatacccacataaaaatctgacacgtg 23597122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 55; Significance: 1e-22; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 137 - 239
Target Start/End: Original strand, 19329842 - 19329944
Alignment:
Q  137 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 236  Q
    |||| |||||| ||||||||  ||||||||||||||| |||||||||  |||||||||||||||||||| ||||  |||| || ||||||||||||||||    
T  19329842 gagtaatgatacatagacatccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcacactttc 19329941  T
Q  237 tct 239  Q
    |||    
T  19329942 tct 19329944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 142 - 239
Target Start/End: Original strand, 3784000 - 3784097
Alignment:
Q  142 atgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 239  Q
    |||||| |||||||   |||||||||||||||||||||||||  ||||||||||||||||||||  |||  ||||||| |||||||||||||||||||    
T  3784000 atgatacatagacacccttaggtggcaatacatcttttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctct 3784097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 138 - 239
Target Start/End: Original strand, 35522877 - 35522978
Alignment:
Q  138 agttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttct 237  Q
    |||||||||| ||||||||  ||| ||||||||||| | ||| |||  |||||||||||||||||||||  ||||||||||| |||||||||||||||||    
T  35522877 agttatgatacatagacatccttaagtggcaatacaccatttaacacccacacaaaaatctgacacgtggccatatggatcccgcacaagcacactttct 35522976  T
Q  238 ct 239  Q
    ||    
T  35522977 ct 35522978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 133 - 237
Target Start/End: Original strand, 7727902 - 7728006
Alignment:
Q  133 aaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacac 232  Q
    ||||||||||||||| ||| |||   |||||||| |||||| || |||||||||||| |||||||||||| ||| ||||||||| || ||||||| ||||    
T  7727902 aaaagagttatgatacataaacacccttaggtggtaatacacctcttgacattcacataaaaatctgacatgtggtcatatggaccccgcacaagtacac 7728001  T
Q  233 tttct 237  Q
    |||||    
T  7728002 tttct 7728006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 135 - 239
Target Start/End: Complemental strand, 19436289 - 19436185
Alignment:
Q  135 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactt 234  Q
    |||||| |||||| ||||||||  ||||||| ||||||| |||||||||  ||||||||||||||||||||  |||  ||||||| ||| ||||||||||    
T  19436289 aagagtaatgatacatagacatccttaggtgacaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcataagcacactt 19436190  T
Q  235 tctct 239  Q
    |||||    
T  19436189 tctct 19436185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 136 - 239
Target Start/End: Original strand, 3434561 - 3434664
Alignment:
Q  136 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 235  Q
    ||||| |||||| ||||||||  ||||||||||||||| | |||||||  |||||||||| |||||||||  |||  ||||||| |||||||||||||||    
T  3434561 agagtaatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaaactgacacgtagtcacgtggatcccgcacaagcacacttt 3434660  T
Q  236 ctct 239  Q
    ||||    
T  3434661 ctct 3434664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 3694389 - 3694469
Alignment:
Q  159 ttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 239  Q
    ||||||| ||||||| ||||| |||  ||||||||||||||||||||  |||| ||||||| |||||||||||||||||||    
T  3694389 ttaggtgacaatacaccttttaacacccacacaaaaatctgacacgtagtcatgtggatcccgcacaagcacactttctct 3694469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 136 - 239
Target Start/End: Original strand, 22343360 - 22343463
Alignment:
Q  136 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 235  Q
    |||||||||||| ||| |||   ||||||||||||||| |  ||||||  ||||||||||||||||| |||| |||||||| || ||||||| |||||||    
T  22343360 agagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtgaccatatggaccccgcacaagtacacttt 22343459  T
Q  236 ctct 239  Q
    ||||    
T  22343460 ctct 22343463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 136 - 239
Target Start/End: Complemental strand, 36362014 - 36361911
Alignment:
Q  136 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 235  Q
    ||||| |||||| |||||||   ||||||||||||||||| |||||||  ||||||||||||||||||||  |||  |||| ||  ||||||||||||||    
T  36362014 agagtaatgatacatagacacccttaggtggcaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacacttt 36361915  T
Q  236 ctct 239  Q
    ||||    
T  36361914 ctct 36361911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 133 - 239
Target Start/End: Complemental strand, 35468959 - 35468853
Alignment:
Q  133 aaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacac 232  Q
    |||||||| |||||| ||||||||  |||| |||||||||||| |||||||  |||| |||||||| | | |||| ||| |||| ||||||||| |||||    
T  35468959 aaaagagtaatgatacatagacatccttagatggcaatacatcatttgacacccacataaaaatctaatatgtgaccatgtggaccctgcacaaacacac 35468860  T
Q  233 tttctct 239  Q
    |||||||    
T  35468859 tttctct 35468853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 134 - 239
Target Start/End: Original strand, 40957704 - 40957809
Alignment:
Q  134 aaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacact 233  Q
    ||||||| |||||| ||||||| | |||||||||||||||   ||||| |  ||||||||||||||||||||  |||  ||||||| | |||||||||||    
T  40957704 aaagagtaatgatacatagacactcttaggtggcaatacactctttgatacccacacaaaaatctgacacgtagtcacgtggatcccgtacaagcacact 40957803  T
Q  234 ttctct 239  Q
    ||||||    
T  40957804 ttctct 40957809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 135 - 239
Target Start/End: Original strand, 7389387 - 7389491
Alignment:
Q  135 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactt 234  Q
    |||||| |||||| |||||||   |||||||||||||||   |||||||  ||||||||||||||||||||  |||  |||| || ||||||||||||||    
T  7389387 aagagtaatgatacatagacacccttaggtggcaatacactctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 7389486  T
Q  235 tctct 239  Q
    |||||    
T  7389487 tctct 7389491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 135 - 239
Target Start/End: Original strand, 38044195 - 38044299
Alignment:
Q  135 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactt 234  Q
    ||||||||||||| ||| |||   ||||||||||||||| |  ||||||| ||||||||||||||||| ||   |||||||| || ||||||| ||||||    
T  38044195 aagagttatgatacataaacacccttaggtggcaatacaccccttgacatccacacaaaaatctgacatgtagccatatggaccccgcacaagtacactt 38044294  T
Q  235 tctct 239  Q
    |||||    
T  38044295 tctct 38044299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 160 - 239
Target Start/End: Original strand, 8238236 - 8238315
Alignment:
Q  160 taggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 239  Q
    |||||||||||||| | |||||||  ||||||||||||||||| ||  ||||||||| || ||||||| |||||||||||    
T  8238236 taggtggcaatacaccctttgacacccacacaaaaatctgacatgtagtcatatggaccccgcacaagtacactttctct 8238315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 136 - 239
Target Start/End: Original strand, 36362025 - 36362128
Alignment:
Q  136 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 235  Q
    ||||| |||||| |||||||   |||||||| |||||||| |||||||  ||||||||||||||||||||  |||  |||| ||  ||||||||||||||    
T  36362025 agagtaatgatacatagacacccttaggtggtaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacacttt 36362124  T
Q  236 ctct 239  Q
    ||||    
T  36362125 ctct 36362128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 128 - 239
Target Start/End: Original strand, 41915732 - 41915843
Alignment:
Q  128 tttttaaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaag 227  Q
    ||||||| |||||||||||| ||| |||   ||||||||||||||| |  ||||||   |||||||||||||||| |||  |||||||| || |||||||    
T  41915732 tttttaatagagttatgatacataaacacccttaggtggcaatacaccccttgacacctacacaaaaatctgacatgtggccatatggaccccgcacaag 41915831  T
Q  228 cacactttctct 239  Q
     |||||||||||    
T  41915832 tacactttctct 41915843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 137 - 239
Target Start/End: Original strand, 21234401 - 21234503
Alignment:
Q  137 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 236  Q
    ||||||||||| ||||||||  ||||||| ||||||| | ||||||| |||||||||||| ||||||||   || ||| | || ||||||||||| ||||    
T  21234401 gagttatgatacatagacatccttaggtgacaatacaccctttgacactcacacaaaaatttgacacgtagccacatgtaccccgcacaagcacattttc 21234500  T
Q  237 tct 239  Q
    |||    
T  21234501 tct 21234503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 137 - 239
Target Start/End: Complemental strand, 32564526 - 32564424
Alignment:
Q  137 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 236  Q
    ||||||||||| ||| ||||| ||||||||||||||| |  ||||||  ||||||||||||||||| |||   ||||||| || ||||||  ||||||||    
T  32564526 gagttatgatacataaacattcttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggctatatggaccccgcacaaatacactttc 32564427  T
Q  237 tct 239  Q
    |||    
T  32564426 tct 32564424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 137 - 239
Target Start/End: Original strand, 35137533 - 35137635
Alignment:
Q  137 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 236  Q
    |||| ||||||||||||||   ||||||||||||||| | |||||||  ||||||||||||| ||||||  |||  |||| || |||||| |||||||||    
T  35137533 gagtaatgataaatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaaacacactttc 35137632  T
Q  237 tct 239  Q
    |||    
T  35137633 tct 35137635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 137 - 231
Target Start/End: Complemental strand, 46374902 - 46374808
Alignment:
Q  137 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcaca 231  Q
    ||||||||||| ||||||||  ||||||||||| ||| | ||| |||  |||||||||||||||||||||  || ||||| || |||||||||||    
T  46374902 gagttatgatacatagacatccttaggtggcaacacaccctttaacacccacacaaaaatctgacacgtggccacatggaccccgcacaagcaca 46374808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 239
Target Start/End: Complemental strand, 32951588 - 32951491
Alignment:
Q  142 atgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 239  Q
    |||||| ||||||| | |||| || ||||||||| ||| |||| ||||||||||||| ||||||  |||  |||| || |||||||||||||||||||    
T  32951588 atgatacatagacactcttagatgacaatacatcctttaacatccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacactttctct 32951491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 135 - 239
Target Start/End: Complemental strand, 8080485 - 8080381
Alignment:
Q  135 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactt 234  Q
    |||||| |||||| |||||||   ||||||||||||||| | |||||||   ||| |||||||||||||||  |||  |||| || ||||||||||||||    
T  8080485 aagagtaatgatacatagacacccttaggtggcaatacaccctttgacacctacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 8080386  T
Q  235 tctct 239  Q
    |||||    
T  8080385 tctct 8080381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 135 - 239
Target Start/End: Original strand, 36208171 - 36208275
Alignment:
Q  135 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactt 234  Q
    ||||||||||||| |||||||   |||||||| |||||||   ||||||  |||||||||| |||||| ||| |||  |||| |||||||||||||| ||    
T  36208171 aagagttatgatacatagacacccttaggtggtaatacattcattgacacccacacaaaaagctgacatgtggtcacgtggaccctgcacaagcacattt 36208270  T
Q  235 tctct 239  Q
    |||||    
T  36208271 tctct 36208275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 239
Target Start/End: Original strand, 26296643 - 26296746
Alignment:
Q  136 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 235  Q
    |||||||||||| ||||||||  ||||||| ||||| | | ||| |||| |||| |||||||||| |||||  |||||||| || |||||||| || |||    
T  26296643 agagttatgatacatagacatccttaggtgacaatataccctttaacatccacataaaaatctgatacgtggccatatggaccccgcacaagcgcatttt 26296742  T
Q  236 ctct 239  Q
    ||||    
T  26296743 ctct 26296746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 239
Target Start/End: Original strand, 38837208 - 38837319
Alignment:
Q  128 tttttaaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaag 227  Q
    |||| |||||||| |||||| |||||||   ||||||||||||||| | ||  |||   |||||||||||||||||||  |||  |||| || |||||||    
T  38837208 ttttcaaaagagtaatgatacatagacacccttaggtggcaatacacccttgtacacctacacaaaaatctgacacgtagtcacgtggaccccgcacaag 38837307  T
Q  228 cacactttctct 239  Q
    ||||||||||||    
T  38837308 cacactttctct 38837319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 132 - 239
Target Start/End: Complemental strand, 40846218 - 40846111
Alignment:
Q  132 taaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcaca 231  Q
    |||| ||||||||||| ||| ||||  ||||||||||||||| |  ||||||| ||||||||||||| ||| ||  | ||||||| || ||||||  |||    
T  40846218 taaaggagttatgatacataaacatccttaggtggcaatacaccccttgacatccacacaaaaatctaacatgtagttatatggaccccgcacaaataca 40846119  T
Q  232 ctttctct 239  Q
    ||||||||    
T  40846118 ctttctct 40846111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 239
Target Start/End: Complemental strand, 46033902 - 46033799
Alignment:
Q  136 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 235  Q
    |||||||||||| ||||| ||| ||||||||||||||| | ||| |||  |||| |||||||||||||||| ||| ||| |  | ||||||||| | |||    
T  46033902 agagttatgatacatagatattcttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatgaactccgcacaagcatatttt 46033803  T
Q  236 ctct 239  Q
    ||||    
T  46033802 ctct 46033799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 137 - 239
Target Start/End: Complemental strand, 4999614 - 4999512
Alignment:
Q  137 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 236  Q
    |||| |||||| |||||||   |||| |||||||||| |||||||||  ||||||||||||||| ||||  |||  |||| || |||||| |||||||||    
T  4999614 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgatacgtagtcacgtggaccccgcacaaacacactttc 4999515  T
Q  237 tct 239  Q
    |||    
T  4999514 tct 4999512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 137 - 239
Target Start/End: Original strand, 38267040 - 38267142
Alignment:
Q  137 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 236  Q
    |||| |||||| |||||||   ||| ||| ||||||| | |||||||  ||||||||||||||||||||  |||  |||| || ||||||||||||||||    
T  38267040 gagtaatgatacatagacacccttatgtgacaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 38267139  T
Q  237 tct 239  Q
    |||    
T  38267140 tct 38267142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 206
Target Start/End: Original strand, 18207176 - 18207249
Alignment:
Q  133 aaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtg 206  Q
    ||||||||||||||| |||||||   ||||||||||||||| || ||||||  || |||||||||| |||||||    
T  18207176 aaaagagttatgatacatagacaaccttaggtggcaatacacctcttgacacccatacaaaaatctaacacgtg 18207249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 239
Target Start/End: Complemental strand, 16374894 - 16374822
Alignment:
Q  167 caatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 239  Q
    |||||||||  ||||||| ||||||||||||||||||||| |||  ||||||   ||||||||||| ||||||    
T  16374894 caatacatcccttgacatccacacaaaaatctgacacgtggtcacgtggatctcacacaagcacacattctct 16374822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 213
Target Start/End: Original strand, 45223038 - 45223118
Alignment:
Q  133 aaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatat 213  Q
    |||||||| |||||| ||| ||||  ||||||||||||||||  ||  ||||  ||||||||||||||||||| |||||||    
T  45223038 aaaagagtaatgatatatatacatccttaggtggcaatacattcttgaacatctacacaaaaatctgacacgtaatcatat 45223118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 239
Target Start/End: Original strand, 41423682 - 41423784
Alignment:
Q  137 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 236  Q
    ||||||||||| ||||||||  |||| ||| |||||| || |||||| | |||||||||||||||| ||| |||  | ||||| | ||||||| | ||||    
T  41423682 gagttatgatacatagacatcattagatggtaatacacctcttgacacttacacaaaaatctgacatgtggtcacgtagatcccgtacaagcatattttc 41423781  T
Q  237 tct 239  Q
    |||    
T  41423782 tct 41423784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 54; Significance: 4e-22; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 136 - 237
Target Start/End: Original strand, 37038478 - 37038579
Alignment:
Q  136 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 235  Q
    ||||| |||||| |||||||| |||||||||||||||| | |||||||  ||||||||||||||||||||  |||  ||||||| |||||||||||||||    
T  37038478 agagtaatgatacatagacatctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 37038577  T
Q  236 ct 237  Q
    ||    
T  37038578 ct 37038579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 136 - 239
Target Start/End: Original strand, 32032724 - 32032826
Alignment:
Q  136 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 235  Q
    |||||||||||| ||| |||   ||||||||||||||||| || ||||| ||||||||||||||||| |||  ||||||||||||||||||| |||||||    
T  32032724 agagttatgatacataaacacccttaggtggcaatacatcctt-gacatccacacaaaaatctgacatgtggccatatggatcctgcacaagtacacttt 32032822  T
Q  236 ctct 239  Q
    ||||    
T  32032823 ctct 32032826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 133 - 239
Target Start/End: Original strand, 5957826 - 5957932
Alignment:
Q  133 aaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacac 232  Q
    |||| ||| |||||| ||||||||| ||||||||||||||| | |||||||  ||||||||||||||||||||  |||  ||||||| |||||| |||||    
T  5957826 aaaaaagtaatgatacatagacattcttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaatcacac 5957925  T
Q  233 tttctct 239  Q
    |||||||    
T  5957926 tttctct 5957932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 137 - 239
Target Start/End: Complemental strand, 43414681 - 43414579
Alignment:
Q  137 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 236  Q
    ||||||||||| ||||||||  |||| |||||| ||| | |||||||  ||||||||||||| ||||||| ||| |||||||| ||||||||||||||||    
T  43414681 gagttatgatacatagacatccttagatggcaacacaccctttgacacccacacaaaaatctaacacgtggtcacatggatcccgcacaagcacactttc 43414582  T
Q  237 tct 239  Q
    |||    
T  43414581 tct 43414579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 40424021 - 40423941
Alignment:
Q  159 ttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 239  Q
    ||||||||||||||| | |||||||| ||||||||||||||||||||  |||| |||| || |||||||||||||||||||    
T  40424021 ttaggtggcaatacaccctttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacactttctct 40423941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 137 - 239
Target Start/End: Complemental strand, 15048281 - 15048180
Alignment:
Q  137 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 236  Q
    ||||||||||| ||||||||  ||||||||||||||| | |||||||  ||||||||||||||||||||   || ||||| || ||||||||||||||||    
T  15048281 gagttatgatacatagacatccttaggtggcaatacaccctttgacac-cacacaaaaatctgacacgtagccacatggaccccgcacaagcacactttc 15048183  T
Q  237 tct 239  Q
    |||    
T  15048182 tct 15048180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 137 - 239
Target Start/End: Original strand, 15197333 - 15197435
Alignment:
Q  137 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 236  Q
    |||| |||||| ||||||| | ||||||||||||||| | |||||||  ||||||||||||||||||||  |||  |||| || ||||||||||||||||    
T  15197333 gagtaatgatacatagacactcttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 15197432  T
Q  237 tct 239  Q
    |||    
T  15197433 tct 15197435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 139 - 239
Target Start/End: Complemental strand, 10621185 - 10621085
Alignment:
Q  139 gttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctc 238  Q
    ||||||||| ||||||||  |||||||| |||||| | |||||||  ||||||||||||||||||||   || || ||||| ||||||||||||||||||    
T  10621185 gttatgatacatagacatccttaggtggtaatacaccctttgacacccacacaaaaatctgacacgtagccacatcgatcccgcacaagcacactttctc 10621086  T
Q  239 t 239  Q
    |    
T  10621085 t 10621085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 137 - 239
Target Start/End: Complemental strand, 504221 - 504119
Alignment:
Q  137 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 236  Q
    |||| |||||| |||||||   ||||||||||||||| |||||||||  ||||||||||||||||||||  |||  |||| || |||||||||||| |||    
T  504221 gagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacattc 504122  T
Q  237 tct 239  Q
    |||    
T  504121 tct 504119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 137 - 239
Target Start/End: Complemental strand, 1180040 - 1179938
Alignment:
Q  137 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 236  Q
    |||| |||||| |||||||   |||||||| |||||| | |||||||  ||||||||||||||||||||  |||| ||||| | ||||||||||||||||    
T  1180040 gagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggattccgcacaagcacactttc 1179941  T
Q  237 tct 239  Q
    |||    
T  1179940 tct 1179938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 133 - 239
Target Start/End: Complemental strand, 16056505 - 16056399
Alignment:
Q  133 aaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacac 232  Q
    ||||||||||||||| ||| ||||  ||| ||| |||||||||  ||||||  ||||||||||||||||| |||  |||||||| || ||||||| ||||    
T  16056505 aaaagagttatgatacataaacatccttatgtgacaatacatcccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacac 16056406  T
Q  233 tttctct 239  Q
    |||||||    
T  16056405 tttctct 16056399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 133 - 239
Target Start/End: Original strand, 16383373 - 16383479
Alignment:
Q  133 aaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacac 232  Q
    ||||||||||||||| ||| |||   ||||||||||||||| |  ||||||  ||||||||||||||||| |||  |||||||| || ||||||| ||||    
T  16383373 aaaagagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacac 16383472  T
Q  233 tttctct 239  Q
    |||||||    
T  16383473 tttctct 16383479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 159 - 239
Target Start/End: Original strand, 14547944 - 14548024
Alignment:
Q  159 ttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 239  Q
    ||||||||||||||| | |||||||  ||||||||||||||||||||  |||  |||| || |||||||||||||||||||    
T  14547944 ttaggtggcaatacaccatttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 14548024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 135 - 239
Target Start/End: Complemental strand, 15259031 - 15258927
Alignment:
Q  135 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactt 234  Q
    ||||||||||||| ||||| | | |||| ||||||||||||  | ||||| |||| |||||||||||| ||| |||  |||| |||||||||||||| ||    
T  15259031 aagagttatgatacatagatactcttagatggcaatacatccctggacatccacataaaaatctgacatgtggtcacgtggaccctgcacaagcacattt 15258932  T
Q  235 tctct 239  Q
    |||||    
T  15258931 tctct 15258927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 135 - 239
Target Start/End: Complemental strand, 24307895 - 24307791
Alignment:
Q  135 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactt 234  Q
    ||||||||||||| ||| |||   |||||||||||||||||  ||||||  ||||||||||||||| | |||  |||||||| || ||||||| ||||||    
T  24307895 aagagttatgatacataaacacccttaggtggcaatacatcccttgacacccacacaaaaatctgatatgtggccatatggaccccgcacaagtacactt 24307796  T
Q  235 tctct 239  Q
    |||||    
T  24307795 tctct 24307791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 137 - 239
Target Start/End: Original strand, 12831047 - 12831149
Alignment:
Q  137 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 236  Q
    |||| |||||| |||||||   ||||||| ||||||| | |||||||  ||||||||||||||||||||  |||  |||| || ||||||||||||||||    
T  12831047 gagtaatgatacatagacacccttaggtgacaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 12831146  T
Q  237 tct 239  Q
    |||    
T  12831147 tct 12831149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 137 - 239
Target Start/End: Complemental strand, 23122697 - 23122595
Alignment:
Q  137 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 236  Q
    |||| |||||| |||||||   ||| ||||||||||| |||||||||  ||||||||||||||||||||  |||  |||| || ||| ||||||||||||    
T  23122697 gagtaatgatacatagacacccttaagtggcaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcataagcacactttc 23122598  T
Q  237 tct 239  Q
    |||    
T  23122597 tct 23122595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 137 - 239
Target Start/End: Complemental strand, 34012396 - 34012294
Alignment:
Q  137 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 236  Q
    |||| |||||| |||||||   |||||||| |||||| | |||||||  ||||||||||| ||||||||  |||  ||||||| ||||||||||||||||    
T  34012396 gagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggatcccgcacaagcacactttc 34012297  T
Q  237 tct 239  Q
    |||    
T  34012296 tct 34012294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 135 - 239
Target Start/End: Complemental strand, 4854965 - 4854861
Alignment:
Q  135 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactt 234  Q
    |||||| |||||| ||||||||  ||||||||||||||| | ||| |||   ||| |||||||||| | |||  || ||||| |||||||||||||||||    
T  4854965 aagagtaatgatacatagacatccttaggtggcaatacaccctttaacacctacataaaaatctgatatgtggccacatggaccctgcacaagcacactt 4854866  T
Q  235 tctct 239  Q
    |||||    
T  4854865 tctct 4854861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 135 - 239
Target Start/End: Original strand, 34307214 - 34307318
Alignment:
Q  135 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactt 234  Q
    ||||||||||||| ||| |||   ||||||||||||||| |  ||||||  ||||||||||||||||| |||  |||||| | || ||||||| ||||||    
T  34307214 aagagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggacatatgaaccccgcacaagtacactt 34307313  T
Q  235 tctct 239  Q
    |||||    
T  34307314 tctct 34307318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 135 - 239
Target Start/End: Original strand, 42221513 - 42221617
Alignment:
Q  135 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactt 234  Q
    |||||| |||||| ||| ||||  ||||||| ||||||||   | ||||  |||||||||||||||||||| |||||||||| ||   ||||||||||||    
T  42221513 aagagtaatgatacatatacatccttaggtgacaatacattcctggacacccacacaaaaatctgacacgtaatcatatggaccccatacaagcacactt 42221612  T
Q  235 tctct 239  Q
    |||||    
T  42221613 tctct 42221617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 137 - 239
Target Start/End: Complemental strand, 30479574 - 30479472
Alignment:
Q  137 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 236  Q
    ||||||||||| ||| |||   ||||||||||||||| | |||||||| |||| |||||||||||| |||   ||||||| |  ||||||| ||||||||    
T  30479574 gagttatgatacataaacacccttaggtggcaatacaccctttgacatccacataaaaatctgacatgtggctatatggacctcgcacaagtacactttc 30479475  T
Q  237 tct 239  Q
    |||    
T  30479474 tct 30479472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 134 - 239
Target Start/End: Complemental strand, 10284734 - 10284629
Alignment:
Q  134 aaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacact 233  Q
    |||||||||||||| |||||||   ||| ||| |||||||   |||||||  ||||||||||| ||||||||  |||  |||| || |||||||||||||    
T  10284734 aaagagttatgatacatagacacccttaagtgacaatacactctttgacacccacacaaaaatttgacacgtagtcacgtggaccccgcacaagcacact 10284635  T
Q  234 ttctct 239  Q
    ||||||    
T  10284634 ttctct 10284629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 8841510 - 8841430
Alignment:
Q  159 ttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 239  Q
    |||||||||| |||| | |||||||  ||||||||||||| ||||||  |||  |||| || |||||||||||||||||||    
T  8841510 ttaggtggcagtacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacactttctct 8841430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 192
Target Start/End: Original strand, 25838196 - 25838252
Alignment:
Q  136 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaa 192  Q
    |||||||||||||||||| ||  |||||||||||||||  ||||||||| |||||||    
T  25838196 agagttatgataaatagatatccttaggtggcaatacactttttgacatccacacaa 25838252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 133 - 200
Target Start/End: Original strand, 24307625 - 24307692
Alignment:
Q  133 aaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctga 200  Q
    ||||||||||||||| ||| |||   |||||||||||||||||  ||||||  |||||||||||||||    
T  24307625 aaaagagttatgatacataaacacccttaggtggcaatacatccattgacacccacacaaaaatctga 24307692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 239
Target Start/End: Original strand, 9122234 - 9122287
Alignment:
Q  186 cacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 239  Q
    ||||||||||||||||| ||  |||  ||||||| |||||||||||||||||||    
T  9122234 cacacaaaaatctgacatgtagtcacgtggatcccgcacaagcacactttctct 9122287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 128 - 239
Target Start/End: Complemental strand, 10218 - 10107
Alignment:
Q  128 tttttaaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaag 227  Q
    |||| ||||||||||||||| |||||||  |||||||||||||||||| |||||||| |||| |||||||||||||||  |||  |||| |  | |||||    
T  10218 ttttaaaaagagttatgatacatagacacctttaggtggcaatacatcctttgacatccacataaaaatctgacacgtagtcacgtggaccgcgtacaag 10119  T
Q  228 cacactttctct 239  Q
    ||||||||||||    
T  10118 cacactttctct 10107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 51; Significance: 2e-20; HSPs: 25)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 137 - 239
Target Start/End: Original strand, 41236347 - 41236449
Alignment:
Q  137 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 236  Q
    |||| |||||| |||||||   ||||||||||||||| |||||||||| ||||||||||||||||||||  |||  |||| || ||||||||||||||||    
T  41236347 gagtaatgatacatagacacccttaggtggcaatacaccttttgacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 41236446  T
Q  237 tct 239  Q
    |||    
T  41236447 tct 41236449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 133 - 239
Target Start/End: Complemental strand, 50052532 - 50052426
Alignment:
Q  133 aaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacac 232  Q
    |||||||| |||||| ||||||||  ||||||||||||||| | |||||||  ||||||||||||||||||||  |||  |||| || ||||||||||||    
T  50052532 aaaagagtaatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacac 50052433  T
Q  233 tttctct 239  Q
    |||||||    
T  50052432 tttctct 50052426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 137 - 237
Target Start/End: Complemental strand, 50526271 - 50526171
Alignment:
Q  137 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 236  Q
    |||| |||||| |||||||| |||||||||||||||| | |||||||  ||||||||||||||||||||| |||  ||||| | |||||||||| |||||    
T  50526271 gagtaatgatacatagacatctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtggtcacgtggattccgcacaagcacgctttc 50526172  T
Q  237 t 237  Q
    |    
T  50526171 t 50526171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 135 - 239
Target Start/End: Original strand, 55475189 - 55475293
Alignment:
Q  135 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactt 234  Q
    ||||||||||||| ||| ||||  ||||||||||||||| | |||||||  ||||||||||||||||| |||  |||||||| |||||| ||| ||||||    
T  55475189 aagagttatgatacataaacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacatgtggccatatggaccctgcataagtacactt 55475288  T
Q  235 tctct 239  Q
    |||||    
T  55475289 tctct 55475293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 128 - 239
Target Start/End: Complemental strand, 19670825 - 19670714
Alignment:
Q  128 tttttaaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaag 227  Q
    |||| ||||||||||||||| ||| |||   ||||||||||||||| |  |||||| |||||||||||||||||| |||  |||||||| || |||||||    
T  19670825 ttttgaaaagagttatgatacataaacacccttaggtggcaatacaccccttgacactcacacaaaaatctgacatgtggccatatggaccccgcacaag 19670726  T
Q  228 cacactttctct 239  Q
     |||||||||||    
T  19670725 tacactttctct 19670714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 136 - 239
Target Start/End: Original strand, 47986207 - 47986310
Alignment:
Q  136 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 235  Q
    |||||||||||| ||| |||   |||||||||||||||||  ||||||| ||||||||||||||||| |||  |||||||| || ||||||| |||||||    
T  47986207 agagttatgatacataaacacccttaggtggcaatacatcccttgacatccacacaaaaatctgacatgtggccatatggaccccgcacaagtacacttt 47986306  T
Q  236 ctct 239  Q
    ||||    
T  47986307 ctct 47986310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 169 - 239
Target Start/End: Complemental strand, 56300233 - 56300163
Alignment:
Q  169 atacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 239  Q
    ||||||| |||||||| ||||||||||||||||| ||| ||||||| ||||||||||| ||||||||||||    
T  56300233 atacatcatttgacatccacacaaaaatctgacatgtggtcatatgaatcctgcacaaacacactttctct 56300163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 135 - 235
Target Start/End: Complemental strand, 29548061 - 29547961
Alignment:
Q  135 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactt 234  Q
    ||||||||||||| ||| ||||  |||||||||||||||||  ||||||  ||||||||||||||||| |||  ||||||||||| ||| ||| ||||||    
T  29548061 aagagttatgatacataaacatccttaggtggcaatacatcccttgacacccacacaaaaatctgacatgtggccatatggatcccgcataagtacactt 29547962  T
Q  235 t 235  Q
    |    
T  29547961 t 29547961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 135 - 239
Target Start/End: Original strand, 32766956 - 32767060
Alignment:
Q  135 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactt 234  Q
    ||||||||||||| ||| ||| | ||||||||||||||| |  ||||||  || |||||||||||||| |||  |||||||| |||||||||| ||||||    
T  32766956 aagagttatgatacataaacactcttaggtggcaatacaccccttgacacccatacaaaaatctgacatgtggccatatggaccctgcacaagtacactt 32767055  T
Q  235 tctct 239  Q
    |||||    
T  32767056 tctct 32767060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 137 - 239
Target Start/End: Original strand, 6034044 - 6034146
Alignment:
Q  137 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 236  Q
    |||| |||||| |||||||   ||||||||||||||| | |||||||  ||||||||||||||||| ||  |||  ||||||| ||||||||||||||||    
T  6034044 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacatgtagtcacgtggatcccgcacaagcacactttc 6034143  T
Q  237 tct 239  Q
    |||    
T  6034144 tct 6034146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 133 - 239
Target Start/End: Complemental strand, 42044471 - 42044365
Alignment:
Q  133 aaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacac 232  Q
    |||||||| |||||| |||||||   ||||||||||||||||| ||  |||  ||||||||||||||||||||  |||  |||| || ||||||||||||    
T  42044471 aaaagagtaatgatacatagacacccttaggtggcaatacatccttgtacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacac 42044372  T
Q  233 tttctct 239  Q
    |||||||    
T  42044371 tttctct 42044365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 134 - 239
Target Start/End: Original strand, 29239883 - 29239988
Alignment:
Q  134 aaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacact 233  Q
    ||||||| |||||| |||||||   ||||||||||||||| | |||||||| ||||||||||||| ||||||  |||  |||| ||  ||||||||||||    
T  29239883 aaagagtaatgatacatagacacccttaggtggcaatacaccatttgacatccacacaaaaatctaacacgtagtcacgtggaccccacacaagcacact 29239982  T
Q  234 ttctct 239  Q
    ||||||    
T  29239983 ttctct 29239988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 135 - 239
Target Start/End: Complemental strand, 48183151 - 48183047
Alignment:
Q  135 aagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactt 234  Q
    |||||| |||||| |||||||   ||| ||||||||||| | |||||||  ||||||||||||||||||||  |||  |||| || ||||||||||||||    
T  48183151 aagagtaatgatacatagacacccttacgtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 48183052  T
Q  235 tctct 239  Q
    |||||    
T  48183051 tctct 48183047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 137 - 239
Target Start/End: Original strand, 40574779 - 40574881
Alignment:
Q  137 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacg-tgatcatatggatcctgcacaagcacacttt 235  Q
    ||||||||||| ||||||||  |||||||| |||||| | |||||||  ||||||||||||||||||| || | | |||||||| | |||||||||||||    
T  40574779 gagttatgatacatagacatccttaggtggtaatacaccctttgacacccacacaaaaatctgacacgctgct-acatggatcccgaacaagcacacttt 40574877  T
Q  236 ctct 239  Q
    ||||    
T  40574878 ctct 40574881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 136 - 239
Target Start/End: Complemental strand, 44536846 - 44536744
Alignment:
Q  136 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 235  Q
    |||||||||||| ||| ||| ||||||||||||||||| | || ||||| ||||||||||||||||| ||| |||||| || ||  || ||| |||||||    
T  44536846 agagttatgatacataaacacttttaggtggcaatacaccctt-gacatccacacaaaaatctgacatgtggtcatatagaccccacataagtacacttt 44536748  T
Q  236 ctct 239  Q
    ||||    
T  44536747 ctct 44536744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 136 - 239
Target Start/End: Complemental strand, 50813993 - 50813890
Alignment:
Q  136 agagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 235  Q
    |||||||||||| ||| ||| | |||||||| |||||| |  ||||||  ||||||||||||||||| ||| ||||||| | || ||||||| |||||||    
T  50813993 agagttatgatacataaacactcttaggtggtaatacaccccttgacacccacacaaaaatctgacatgtggtcatatgaaccccgcacaagtacacttt 50813894  T
Q  236 ctct 239  Q
    ||||    
T  50813893 ctct 50813890  T

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Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 133 - 239
Target Start/End: Complemental strand, 480551 - 480445
Alignment:
Q  133 aaaagagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacac 232  Q
    |||||||| |||||| |||||||   ||||||| ||||||| | |||||||  ||||||||||||||||||||  |||  |||| || | ||||||||||    
T  480551 aaaagagtaatgatacatagacacccttaggtgacaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcacac 480452  T
Q  233 tttctct 239  Q
    |||||||    
T  480451 tttctct 480445  T

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Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 137 - 239
Target Start/End: Complemental strand, 11511562 - 11511460
Alignment:
Q  137 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 236  Q
    |||| |||||| |||||||   ||||||||||||||| | |||||||  |||| |||||||||||||||  |||  |||| || ||||||||||||||||    
T  11511562 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 11511463  T
Q  237 tct 239  Q
    |||    
T  11511462 tct 11511460  T

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Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 137 - 239
Target Start/End: Original strand, 31910192 - 31910294
Alignment:
Q  137 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 236  Q
    ||||||||||| ||||||||  ||||||| |||||||   |||||||  |||||||||||||||||| |   || ||||| || ||||||||||||||||    
T  31910192 gagttatgatacatagacatccttaggtgacaatacactctttgacacccacacaaaaatctgacacatagccacatggaccccgcacaagcacactttc 31910291  T
Q  237 tct 239  Q
    |||    
T  31910292 tct 31910294  T

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Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 17983821 - 17983741
Alignment:
Q  159 ttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 239  Q
    ||||||||||||||| |  ||||||  ||||||||||||||||| |||  |||||||| || ||||||| |||||||||||    
T  17983821 ttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctct 17983741  T

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Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 239
Target Start/End: Original strand, 29977908 - 29977987
Alignment:
Q  160 taggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 239  Q
    |||||||||||||| |  || |||  ||||||||||||||||||||  ||||||||| ||  ||||||||||||||||||    
T  29977908 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtagtcatatggaccccacacaagcacactttctct 29977987  T

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Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 137 - 239
Target Start/End: Original strand, 3481654 - 3481756
Alignment:
Q  137 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 236  Q
    |||| |||||| |||||||  ||||||||||||||||   |||||||  |||||||||||||||||| |  |||  |||| ||  |||||||||||||||    
T  3481654 gagtaatgatacatagacacctttaggtggcaatacactctttgacacccacacaaaaatctgacacatagtcacgtggaccccacacaagcacactttc 3481753  T
Q  237 tct 239  Q
    |||    
T  3481754 tct 3481756  T

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Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 137 - 239
Target Start/End: Complemental strand, 8343263 - 8343161
Alignment:
Q  137 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 236  Q
    ||||||||||| ||| ||||  ||||||||||||||||| |||||||   ||| |||||||||||| |||  |||||||| || ||| ||| | ||||||    
T  8343263 gagttatgatacataaacatccttaggtggcaatacatcctttgacacctacataaaaatctgacatgtggccatatggaccccgcataagtatactttc 8343164  T
Q  237 tct 239  Q
    |||    
T  8343163 tct 8343161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 186 - 239
Target Start/End: Original strand, 41823931 - 41823984
Alignment:
Q  186 cacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 239  Q
    ||||||||||||||||||||  ||| ||||| || |||||||||||||||||||    
T  41823931 cacacaaaaatctgacacgtagtcacatggaccccgcacaagcacactttctct 41823984  T

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Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 235
Target Start/End: Complemental strand, 54473633 - 54473535
Alignment:
Q  137 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacacttt 235  Q
    |||| |||||| |||||||   ||||||| ||||||| | |||||||  ||||||||||||| ||||||  |||  |||| || |||||||||||||||    
T  54473633 gagtaatgatacatagacacccttaggtgacaatacaccatttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacacttt 54473535  T

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Target: scaffold1268 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold1268
Description:

Target: scaffold1268; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 137 - 239
Target Start/End: Complemental strand, 1029 - 927
Alignment:
Q  137 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 236  Q
    |||| |||||| |||||||| |||||||||||||||| | ||| |||| |||||||||| |||||||||  |||  || |||| ||||||||||||||||    
T  1029 gagtaatgatacatagacatctttaggtggcaatacaccctttaacatccacacaaaaaactgacacgtagtcacgtgaatcccgcacaagcacactttc 930  T
Q  237 tct 239  Q
    |||    
T  929 tct 927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1267 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold1267
Description:

Target: scaffold1267; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 137 - 239
Target Start/End: Complemental strand, 1029 - 927
Alignment:
Q  137 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 236  Q
    |||| |||||| |||||||| |||||||||||||||| | ||| |||| |||||||||| |||||||||  |||  || |||| ||||||||||||||||    
T  1029 gagtaatgatacatagacatctttaggtggcaatacaccctttaacatccacacaaaaaactgacacgtagtcacgtgaatcccgcacaagcacactttc 930  T
Q  237 tct 239  Q
    |||    
T  929 tct 927  T

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Target: scaffold0237 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 137 - 239
Target Start/End: Original strand, 4029 - 4131
Alignment:
Q  137 gagttatgataaatagacatttttaggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttc 236  Q
    |||| |||||| |||||||  ||||| |||||||||| ||||| |||  ||||||||||||||||||||  | |  ||||||| ||| ||||||||||||    
T  4029 gagtaatgatacatagacacctttagatggcaatacaccttttaacacccacacaaaaatctgacacgtagttacgtggatcccgcataagcacactttc 4128  T
Q  237 tct 239  Q
    |||    
T  4129 tct 4131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 162 - 239
Target Start/End: Original strand, 152523 - 152600
Alignment:
Q  162 ggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 239  Q
    |||||||||||| |  ||||||  ||||||||||||||||| ||| |||||||||||| ||||||  |||||||||||    
T  152523 ggtggcaatacaccccttgacacccacacaaaaatctgacatgtggtcatatggatcccgcacaaatacactttctct 152600  T

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Target: scaffold0316 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 239
Target Start/End: Original strand, 17077 - 17156
Alignment:
Q  160 taggtggcaatacatcttttgacattcacacaaaaatctgacacgtgatcatatggatcctgcacaagcacactttctct 239  Q
    ||||| ||||||||||  | ||||| ||||||||||||||||| ||| ||| ||||| || ||||||||||| |||||||    
T  17077 taggttgcaatacatccctcgacatccacacaaaaatctgacatgtggtcacatggaccccgcacaagcacattttctct 17156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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