View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13133_high_51 (Length: 227)
Name: NF13133_high_51
Description: NF13133
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13133_high_51 |
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Alignment Details
Target: chr1 (Bit Score: 182; Significance: 2e-98; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 18 - 211
Target Start/End: Complemental strand, 8288196 - 8288003
Alignment:
| Q |
18 |
cgaatcactcgtaatacacatacttaagagctatatccagggtttagtctgttcacattgactaaatagctactagtatgttaagaacctactaaatcta |
117 |
Q |
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| T |
8288196 |
cgaatcactcgtaatacacatacttaagagctatatccagggtttagtctgttcacattgactaaatagctactagtatgttaagaacctactaaatcta |
8288097 |
T |
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| Q |
118 |
aggtgtacaaagtatcatgggttagtcaatgactaatctctttagaagaacatgattgaccatgttcatttgggtttcctatctcaactatatt |
211 |
Q |
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| T |
8288096 |
aggtgtacagagtatcatggttttgtcaatgactaatctctttagaagaacatgattgaccatgttcatttgggtttcctatctcaactatatt |
8288003 |
T |
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