View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13133_low_32 (Length: 313)
Name: NF13133_low_32
Description: NF13133
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13133_low_32 |
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Alignment Details
Target: chr7 (Bit Score: 216; Significance: 1e-118; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 1 - 299
Target Start/End: Complemental strand, 21925485 - 21925202
Alignment:
| Q |
1 |
gctatgctcacgggacgaatcacatattaactgtgagatatcggattacgtttacaatctaacattatacgaacgaatatgatatctgtgttttagctaa |
100 |
Q |
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|||||||||||||||||||| | | ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| |
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| T |
21925485 |
gctatgctcacgggacgaat-agacattaactgtgagatatcggattacgtttacaatctaacattattcgaacgaatataatatctgtgttttagctaa |
21925387 |
T |
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| Q |
101 |
atgagcgagatatcaaatattagatattatatattttatccaagagatatcaagatctatgcacggcaattagtgagataattgaaatatgagtatttta |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||| |
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| T |
21925386 |
atgagcgagatatcaaatattagatattatatattttatccaagagatatcgagatctatgcacggcaattagtgggataattgaaatatgagtat---- |
21925291 |
T |
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| Q |
201 |
tagttgttgatagaggaaatatgttagagacctgaccagtgaaacttaatcccaattcaacttgttcattgatggtctaaggacgaacctataatttag |
299 |
Q |
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||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
21925290 |
----------tagaggaaatatgttagagacctgaccggtgaaacttaatcccaattcaacttgttcattgatggtctaaggacgaacctataatttag |
21925202 |
T |
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