View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13133_low_33 (Length: 309)
Name: NF13133_low_33
Description: NF13133
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13133_low_33 |
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Alignment Details
Target: chr5 (Bit Score: 258; Significance: 1e-144; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 258; E-Value: 1e-144
Query Start/End: Original strand, 11 - 288
Target Start/End: Complemental strand, 14232290 - 14232013
Alignment:
| Q |
11 |
cacagattgtggtgtgtatgcctctgcctagatgttggtggttgatcttgtctggtatgctcttacacatgacctccctgcttgtgtaatctggagtgga |
110 |
Q |
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| T |
14232290 |
cacagattgtggtgtgtatgcctctgcctagatgttggtggttgatcttgtctggtatgctcttacacatgacctccctgcttgtgtaatctggagtgga |
14232191 |
T |
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| Q |
111 |
cgtcttagttgtgaaggatgaattcactaagatgtgtgtactggtgaatatatagtgatcaagaattaattaattttttgttgttggaatattgacatgt |
210 |
Q |
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| T |
14232190 |
cgtcttagttgtgaagaatgaattcactaagatgtgtgtagtggtgaatatatagtgatcaagaattaattaattttttgttgttggcatattgacatgc |
14232091 |
T |
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| Q |
211 |
aagttaatttatggttaaacgtgaattttttgctgttggggtttgagaactcatatctctgcaattgaggtatgaata |
288 |
Q |
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| T |
14232090 |
aagttaatttatggttaaacgtgaattttttgctgttggagtttgagaactcatatctctgcaattgaggtatgaata |
14232013 |
T |
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