View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF13134_high_11 (Length: 250)
Name: NF13134_high_11
Description: NF13134
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13134_high_11 |
 |  |
|
| [»] chr8 (10 HSPs) |
 |  |
|
Alignment Details
Target: chr8 (Bit Score: 172; Significance: 2e-92; HSPs: 10)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 8 - 250
Target Start/End: Complemental strand, 9133749 - 9133507
Alignment:
| Q |
8 |
agattattctcactgggggtatctaataggtaccaggtcttaaatagttaagaccctcccaatagagatggtctgaggtctaaagnnnnnnnnngcaggg |
107 |
Q |
| |
|
||||| |||||| ||| |||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
9133749 |
agattcttctcattggaggtacctaataggtaccgggtcttaaatagttaagaccctcccaatagagatggtctgaggtctaaataaaacaaaagcaggg |
9133650 |
T |
 |
| Q |
108 |
ctgtcaaatgcaattatcatatgagtattggtgcaagtttttatattttagggcacattggatttgcctttagactcgagtagacgagttgaacctaaca |
207 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9133649 |
ctgtcaaatgcaattatcatatgagtattggtgcaattttttatattttagggcacattggatttgcctttagactcgagtagacgagttgaacctaaca |
9133550 |
T |
 |
| Q |
208 |
agtcgaaccaggttgctagtaaactttaaacgaatcgaactcg |
250 |
Q |
| |
|
||||||||| | |||||| |||||||||||||| ||||||||| |
|
|
| T |
9133549 |
agtcgaaccggattgctaataaactttaaacgagtcgaactcg |
9133507 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 24 - 81
Target Start/End: Original strand, 5978726 - 5978783
Alignment:
| Q |
24 |
gggtatctaataggtaccaggtcttaaatagttaagaccctcccaatagagatggtct |
81 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||| |||| |||||||||| |
|
|
| T |
5978726 |
gggtacctaataggtaccaggtcttaaatagttaagaccctctcaatggagatggtct |
5978783 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 25 - 81
Target Start/End: Original strand, 31226676 - 31226732
Alignment:
| Q |
25 |
ggtatctaataggtaccaggtcttaaatagttaagaccctcccaatagagatggtct |
81 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
31226676 |
ggtatctaataggtactgggtcttaaatagttaagaccctcctaatagagatggtct |
31226732 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 21 - 80
Target Start/End: Original strand, 18806775 - 18806834
Alignment:
| Q |
21 |
tgggggtatctaataggtaccaggtcttaaatagttaagaccctcccaatagagatggtc |
80 |
Q |
| |
|
|||||||| |||||| ||||||||||||||||||||||||| |||||||| ||||||||| |
|
|
| T |
18806775 |
tgggggtacctaatatgtaccaggtcttaaatagttaagactctcccaatggagatggtc |
18806834 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 21 - 81
Target Start/End: Original strand, 5139878 - 5139941
Alignment:
| Q |
21 |
tgggggtatctaataggtaccaggtcttaaa---tagttaagaccctcccaatagagatggtct |
81 |
Q |
| |
|
||||||||||||||||||||| ||||||||| ||||||||||||||||||| | |||||||| |
|
|
| T |
5139878 |
tgggggtatctaataggtaccgggtcttaaatagtagttaagaccctcccaatggtgatggtct |
5139941 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 21 - 81
Target Start/End: Original strand, 5536001 - 5536061
Alignment:
| Q |
21 |
tgggggtatctaataggtaccaggtcttaaatagttaagaccctcccaatagagatggtct |
81 |
Q |
| |
|
||||| || |||||||||||| ||||||||||||||||||||| ||||| |||||||||| |
|
|
| T |
5536001 |
tggggatacctaataggtaccgtgtcttaaatagttaagacccttccaatggagatggtct |
5536061 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 23 - 81
Target Start/End: Complemental strand, 35468247 - 35468189
Alignment:
| Q |
23 |
ggggtatctaataggtaccaggtcttaaatagttaagaccctcccaatagagatggtct |
81 |
Q |
| |
|
|||||| |||||||||||| |||||||||| |||||||||||||| | |||||||||| |
|
|
| T |
35468247 |
ggggtacctaataggtaccgggtcttaaatgtttaagaccctcccattggagatggtct |
35468189 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 81
Target Start/End: Original strand, 37673978 - 37674029
Alignment:
| Q |
30 |
ctaataggtaccaggtcttaaatagttaagaccctcccaatagagatggtct |
81 |
Q |
| |
|
|||||||||||| ||||||||| |||||||||||||| |||||||||||| |
|
|
| T |
37673978 |
ctaataggtaccgagtcttaaatgtttaagaccctcccattagagatggtct |
37674029 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 79
Target Start/End: Original strand, 6519259 - 6519308
Alignment:
| Q |
30 |
ctaataggtaccaggtcttaaatagttaagaccctcccaatagagatggt |
79 |
Q |
| |
|
|||||||||||| |||||||||| |||||||| |||||| | |||||||| |
|
|
| T |
6519259 |
ctaataggtaccgggtcttaaatggttaagactctcccattggagatggt |
6519308 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 81
Target Start/End: Original strand, 30905747 - 30905807
Alignment:
| Q |
21 |
tgggggtatctaataggtaccaggtcttaaatagttaagaccctcccaatagagatggtct |
81 |
Q |
| |
|
|||||||| ||| |||||| ||| |||||||||||||||||||| ||| || |||||||| |
|
|
| T |
30905747 |
tgggggtacctattaggtatcagctcttaaatagttaagaccctaccattatggatggtct |
30905807 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 45; Significance: 9e-17; HSPs: 10)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 21 - 81
Target Start/End: Original strand, 35332191 - 35332251
Alignment:
| Q |
21 |
tgggggtatctaataggtaccaggtcttaaatagttaagaccctcccaatagagatggtct |
81 |
Q |
| |
|
|||||||| |||||||||||| |||||||||||||||||||||||||| | |||||||||| |
|
|
| T |
35332191 |
tgggggtacctaataggtaccgggtcttaaatagttaagaccctcccattggagatggtct |
35332251 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 21 - 81
Target Start/End: Complemental strand, 43968698 - 43968638
Alignment:
| Q |
21 |
tgggggtatctaataggtaccaggtcttaaatagttaagaccctcccaatagagatggtct |
81 |
Q |
| |
|
|||||||| ||||||||| || |||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
43968698 |
tgggggtacctaataggttccgggtcttaaatagttaagaccctcccaatggagatggtct |
43968638 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 27 - 81
Target Start/End: Complemental strand, 45832478 - 45832424
Alignment:
| Q |
27 |
tatctaataggtaccaggtcttaaatagttaagaccctcccaatagagatggtct |
81 |
Q |
| |
|
||||||||||||| | ||||||||||||| ||||||||| |||| |||||||||| |
|
|
| T |
45832478 |
tatctaataggtatcgggtcttaaatagtaaagaccctctcaatggagatggtct |
45832424 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 81
Target Start/End: Original strand, 35382580 - 35382631
Alignment:
| Q |
30 |
ctaataggtaccaggtcttaaatagttaagaccctcccaatagagatggtct |
81 |
Q |
| |
|
||||||| ||| |||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
35382580 |
ctaatagttactgggtcttaaatagttaagaccctcccaatgaagatggtct |
35382631 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 81
Target Start/End: Complemental strand, 2396218 - 2396164
Alignment:
| Q |
27 |
tatctaataggtaccaggtcttaaatagttaagaccctcccaatagagatggtct |
81 |
Q |
| |
|
||||||||||||||| |||||||||| ||||||| ||||||| | ||||||||| |
|
|
| T |
2396218 |
tatctaataggtaccgggtcttaaatggttaagaacctcccattgaagatggtct |
2396164 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 61
Target Start/End: Original strand, 45081635 - 45081673
Alignment:
| Q |
23 |
ggggtatctaataggtaccaggtcttaaatagttaagac |
61 |
Q |
| |
|
||||||||||||||||||||| |||||||| |||||||| |
|
|
| T |
45081635 |
ggggtatctaataggtaccagatcttaaatggttaagac |
45081673 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 81
Target Start/End: Complemental strand, 8824887 - 8824822
Alignment:
| Q |
16 |
ctcactgggggtatctaataggtaccaggtcttaaatagttaagaccctcccaatagagatggtct |
81 |
Q |
| |
|
|||||||| | || |||||||||||| | ||||||||||||||||| || |||| |||||||||| |
|
|
| T |
8824887 |
ctcactggagatacctaataggtaccggatcttaaatagttaagactctttcaatggagatggtct |
8824822 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 183 - 216
Target Start/End: Original strand, 12673626 - 12673659
Alignment:
| Q |
183 |
tcgagtagacgagttgaacctaacaagtcgaacc |
216 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||| |
|
|
| T |
12673626 |
tcgagtagacgagttgaacctaacgagtcgaacc |
12673659 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 66
Target Start/End: Original strand, 25436118 - 25436154
Alignment:
| Q |
30 |
ctaataggtaccaggtcttaaatagttaagaccctcc |
66 |
Q |
| |
|
||||||| |||||||||||||||| |||||||||||| |
|
|
| T |
25436118 |
ctaatagataccaggtcttaaatatttaagaccctcc |
25436154 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 70
Target Start/End: Original strand, 38865397 - 38865437
Alignment:
| Q |
30 |
ctaataggtaccaggtcttaaatagttaagaccctcccaat |
70 |
Q |
| |
|
|||| ||||| ||| |||||||||||||||||||||||||| |
|
|
| T |
38865397 |
ctaacaggtatcagatcttaaatagttaagaccctcccaat |
38865437 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 3)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 21 - 80
Target Start/End: Original strand, 46006285 - 46006344
Alignment:
| Q |
21 |
tgggggtatctaataggtaccaggtcttaaatagttaagaccctcccaatagagatggtc |
80 |
Q |
| |
|
|||||||| ||||||| ||| |||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
46006285 |
tgggggtacctaatagttacggggtcttaaatagttaagaccctcccaatggagatggtc |
46006344 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 81
Target Start/End: Original strand, 30595264 - 30595329
Alignment:
| Q |
16 |
ctcactgggggtatctaataggtaccaggtcttaaatagttaagaccctcccaatagagatggtct |
81 |
Q |
| |
|
|||| |||||||| ||||||||||| ||||||||||| |||||||||||| || | |||||||||| |
|
|
| T |
30595264 |
ctcaatgggggtacctaataggtacaaggtcttaaatggttaagaccctcacattggagatggtct |
30595329 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 68
Target Start/End: Complemental strand, 22909274 - 22909229
Alignment:
| Q |
23 |
ggggtatctaataggtaccaggtcttaaatagttaagaccctccca |
68 |
Q |
| |
|
|||| ||||| |||||||||||||||||||| ||||||| |||||| |
|
|
| T |
22909274 |
ggggcatctattaggtaccaggtcttaaatatttaagactctccca |
22909229 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 3)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 23 - 81
Target Start/End: Original strand, 5002578 - 5002636
Alignment:
| Q |
23 |
ggggtatctaataggtaccaggtcttaaatagttaagaccctcccaatagagatggtct |
81 |
Q |
| |
|
|||||| |||||||||||| | |||||||||||||||||||| ||||| |||||||||| |
|
|
| T |
5002578 |
ggggtacctaataggtaccggatcttaaatagttaagacccttccaatggagatggtct |
5002636 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 79
Target Start/End: Original strand, 32658635 - 32658671
Alignment:
| Q |
43 |
ggtcttaaatagttaagaccctcccaatagagatggt |
79 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
32658635 |
ggtcttaaatagttaagactctcccaatagagatggt |
32658671 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 81
Target Start/End: Original strand, 32977565 - 32977625
Alignment:
| Q |
21 |
tgggggtatctaataggtaccaggtcttaaatagttaagaccctcccaatagagatggtct |
81 |
Q |
| |
|
|||||||| |||||||||||| |||||||||| ||||||||| ||| | |||||||||| |
|
|
| T |
32977565 |
tgggggtacctaataggtaccgggtcttaaatgtctaagaccctaccattggagatggtct |
32977625 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 35; Significance: 0.00000000009; HSPs: 2)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 79
Target Start/End: Original strand, 6711084 - 6711138
Alignment:
| Q |
25 |
ggtatctaataggtaccaggtcttaaatagttaagaccctcccaatagagatggt |
79 |
Q |
| |
|
|||| ||||||| ||||| ||||| ||||||||||||||||||||| |||||||| |
|
|
| T |
6711084 |
ggtacctaatagataccatgtcttgaatagttaagaccctcccaatggagatggt |
6711138 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 81
Target Start/End: Complemental strand, 11921856 - 11921800
Alignment:
| Q |
25 |
ggtatctaataggtaccaggtcttaaatagttaagaccctcccaatagagatggtct |
81 |
Q |
| |
|
|||| |||||||||| | |||||||||| |||||||||||||| | |||||||||| |
|
|
| T |
11921856 |
ggtacctaataggtatcgggtcttaaatgtttaagaccctcccattggagatggtct |
11921800 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 35; Significance: 0.00000000009; HSPs: 6)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 23 - 81
Target Start/End: Original strand, 24555975 - 24556033
Alignment:
| Q |
23 |
ggggtatctaataggtaccaggtcttaaatagttaagaccctcccaatagagatggtct |
81 |
Q |
| |
|
|||||| |||||||||| | ||||||||||||||||||||| ||||| |||||||||| |
|
|
| T |
24555975 |
ggggtacctaataggtaacgggtcttaaatagttaagacccatccaatggagatggtct |
24556033 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 23 - 81
Target Start/End: Original strand, 32451968 - 32452026
Alignment:
| Q |
23 |
ggggtatctaataggtaccaggtcttaaatagttaagaccctcccaatagagatggtct |
81 |
Q |
| |
|
|||||| |||||| ||||| ||||||||||||||||||||||| ||| |||||||||| |
|
|
| T |
32451968 |
ggggtacctaatatgtaccgggtcttaaatagttaagaccctcataatggagatggtct |
32452026 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 31 - 81
Target Start/End: Original strand, 47783871 - 47783921
Alignment:
| Q |
31 |
taataggtaccaggtcttaaatagttaagaccctcccaatagagatggtct |
81 |
Q |
| |
|
|||||||||| ||||||||||||||||||| |||||||| |||||||||| |
|
|
| T |
47783871 |
taataggtactgggtcttaaatagttaagactctcccaatggagatggtct |
47783921 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 81
Target Start/End: Complemental strand, 11120482 - 11120426
Alignment:
| Q |
25 |
ggtatctaataggtaccaggtcttaaatagttaagaccctcccaatagagatggtct |
81 |
Q |
| |
|
|||| |||||||||||| || ||||| |||||||||||||||||| |||||||||| |
|
|
| T |
11120482 |
ggtacctaataggtaccgagttttaaaaagttaagaccctcccaatggagatggtct |
11120426 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 183 - 250
Target Start/End: Complemental strand, 24575481 - 24575414
Alignment:
| Q |
183 |
tcgagtagacgagttgaacctaacaagtcgaaccaggttgctagtaaactttaaacgaatcgaactcg |
250 |
Q |
| |
|
|||||||||||||||||||||||| || |||||| |||| | || |||||||||||| |||||||| |
|
|
| T |
24575481 |
tcgagtagacgagttgaacctaacgagccgaaccgagttgttcgtgaactttaaacgagccgaactcg |
24575414 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 81
Target Start/End: Complemental strand, 43822710 - 43822650
Alignment:
| Q |
21 |
tgggggtatctaataggtaccaggtcttaaatagttaagaccctcccaatagagatggtct |
81 |
Q |
| |
|
|||||||| |||||||||||| |||||||||| ||||||||| ||| | |||||||||| |
|
|
| T |
43822710 |
tgggggtacctaataggtaccgggtcttaaatgtctaagacccttccattggagatggtct |
43822650 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 33; Significance: 0.000000001; HSPs: 4)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 81
Target Start/End: Original strand, 43302331 - 43302387
Alignment:
| Q |
25 |
ggtatctaataggtaccaggtcttaaatagttaagaccctcccaatagagatggtct |
81 |
Q |
| |
|
|||| ||||||| ||| ||||||||||||||||||| ||||||||| ||||||||| |
|
|
| T |
43302331 |
ggtacctaatagttactaggtcttaaatagttaagatcctcccaatgaagatggtct |
43302387 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 183 - 250
Target Start/End: Original strand, 17025956 - 17026023
Alignment:
| Q |
183 |
tcgagtagacgagttgaacctaacaagtcgaaccaggttgctagtaaactttaaacgaatcgaactcg |
250 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||| |||| | | |||||||||||| |||||||| |
|
|
| T |
17025956 |
tcgagtagacgagttgaacctaacgagtcgaaccgagttgttcgcgaactttaaacgagccgaactcg |
17026023 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 183 - 250
Target Start/End: Original strand, 18740818 - 18740885
Alignment:
| Q |
183 |
tcgagtagacgagttgaacctaacaagtcgaaccaggttgctagtaaactttaaacgaatcgaactcg |
250 |
Q |
| |
|
|||||||||||| ||||||||||| || |||||| |||| | || |||||||||||| ||||||||| |
|
|
| T |
18740818 |
tcgagtagacgaattgaacctaacgagccgaaccgagttgttcgtgaactttaaacgagtcgaactcg |
18740885 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 60
Target Start/End: Complemental strand, 19987075 - 19987037
Alignment:
| Q |
22 |
gggggtatctaataggtaccaggtcttaaatagttaaga |
60 |
Q |
| |
|
||||||| ||||||||||| ||||||||||||||||||| |
|
|
| T |
19987075 |
gggggtacctaataggtactaggtcttaaatagttaaga |
19987037 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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