View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13134_low_1 (Length: 524)
Name: NF13134_low_1
Description: NF13134
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13134_low_1 |
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Alignment Details
Target: chr2 (Bit Score: 476; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 476; E-Value: 0
Query Start/End: Original strand, 17 - 508
Target Start/End: Complemental strand, 8954999 - 8954508
Alignment:
| Q |
17 |
ctgtgatttgatgaagataagctaccagtgttactgccaattcctttggacacactccttttgtgttctgattgtgaagttttgttgatgacagaatgat |
116 |
Q |
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| T |
8954999 |
ctgtgatttgatgaagagaagctaccagtgttactgccaattcctttggacacactccttttgtgttctgattgtgaagttttgttgatgacagaatgat |
8954900 |
T |
|
| Q |
117 |
caatgtggcttttttcgcttccaaactctgatgtgaaactacctttacttcccctactcctgcggcggtgcaaatggcgtgtagaattgtttttcggtac |
216 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
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| T |
8954899 |
caatgtggcttttttcgcttccaaactctgatgtgaaactacctttacttcccctactcctgcggcggtgcaaatggtgtgtagaattgtttttcggtac |
8954800 |
T |
|
| Q |
217 |
ttcatggcttcctttctccgttgaacttgctttgtgagagtaagtatgagaaggtttcacttcatcaacattaacatgtttgttgaagatctctggattt |
316 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8954799 |
ttcatggcttcctttctccgttgaacttgctttgtgagagtaagtatgagaaggtttcacttcatcaacattaacatgtttgttgaagatctctggattt |
8954700 |
T |
|
| Q |
317 |
tccattggatcattcggatttattatgaatccggccttttctctgcgtgcactctcaaaacatgcactgtatggaatgttgtcagcttcccagttgccaa |
416 |
Q |
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|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8954699 |
tccattggattgttcggatttattatgaatccggccttttctctgcgtgcactctcaaaacatgcactgtatggaatgttgtcagcttcccagttgccaa |
8954600 |
T |
|
| Q |
417 |
actttggaacgtgagaatgctgctaaaatgattcattgtggaaagatttgtcaaacatgatttgatataagcttgaaatatcagcttatttt |
508 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8954599 |
actttggaacgtgagaatgctgctaaaatgattcattgtggaaagatttgtcaaacatgatttgatataagcttgaaatatcagcttatttt |
8954508 |
T |
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