View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13136_low_19 (Length: 204)
Name: NF13136_low_19
Description: NF13136
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13136_low_19 |
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Alignment Details
Target: chr3 (Bit Score: 149; Significance: 7e-79; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 149; E-Value: 7e-79
Query Start/End: Original strand, 16 - 191
Target Start/End: Complemental strand, 45133161 - 45132977
Alignment:
| Q |
16 |
aaaacaacctcaattctagtcgcattgtcaattgagttaggccaaaatgatctggttattttcgagcatgaaattaagaagttccgcacagcctaagata |
115 |
Q |
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| T |
45133161 |
aaaacaacctcaattctagtcgcattgtcaattgagttaggccaaaatgatctggttattttcgagcatgaaattaagaagttccgcacagcctaagata |
45133062 |
T |
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| Q |
116 |
---------ttggccagtccatttggttaggccaaaattgacagcgcgaaaaattgcaaaaaccttaatgtcgtaattcatctca |
191 |
Q |
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| T |
45133061 |
ttggtccgtttggccagtccatttggttaggccaaaattgacagcgcgaaaaattgaaaaaaccttaatgtcgtaattcatctca |
45132977 |
T |
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