View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13137_high_9 (Length: 281)
Name: NF13137_high_9
Description: NF13137
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13137_high_9 |
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Alignment Details
Target: chr4 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 55 - 271
Target Start/End: Original strand, 32955585 - 32955801
Alignment:
| Q |
55 |
ctttctacaatctcataacccttgtcgattttctgcgtgtaagcataccctttaagaaataggaaaaggccaatatataaagtggtgataaaggtatata |
154 |
Q |
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| T |
32955585 |
ctttctacaatctcataacccttgtccattttctgcgtgtaagcataccctttaagaaataggaaaaggccaatatataaagtggtgataaaggtatata |
32955684 |
T |
|
| Q |
155 |
gtttcaggtgcacaaataataaaacacatggatgagcctcagagctacacactgacacagtttgatcaaacctggaacgttcactcactgatctgaactc |
254 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
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| T |
32955685 |
gtttcaggtgcacaaataataaaacacatggatgagcctcagagctacacactgacacagtttgatcaaacctgggacgttcactcactgatctgaactc |
32955784 |
T |
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| Q |
255 |
aaaccgcttgtcctatg |
271 |
Q |
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||||||||||||||||| |
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| T |
32955785 |
aaaccgcttgtcctatg |
32955801 |
T |
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