View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13138_high_27 (Length: 300)

Name: NF13138_high_27
Description: NF13138
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13138_high_27
NF13138_high_27
[»] scaffold0139 (2 HSPs)
scaffold0139 (14-278)||(23294-23545)
scaffold0139 (14-56)||(40204-40246)
[»] chr1 (23 HSPs)
chr1 (15-197)||(22145708-22145892)
chr1 (14-186)||(8306444-8306617)
chr1 (94-177)||(7052132-7052215)
chr1 (85-186)||(17901913-17902014)
chr1 (94-186)||(24723579-24723672)
chr1 (85-177)||(21239154-21239245)
chr1 (85-186)||(6834006-6834110)
chr1 (94-186)||(21188152-21188245)
chr1 (84-180)||(35894946-35895041)
chr1 (85-164)||(21243848-21243926)
chr1 (94-157)||(44822249-44822312)
chr1 (29-82)||(14294866-14294920)
chr1 (14-56)||(28476775-28476817)
chr1 (14-56)||(38056713-38056755)
chr1 (14-56)||(50544841-50544883)
chr1 (29-82)||(51131316-51131370)
chr1 (94-186)||(22350510-22350602)
chr1 (118-188)||(38056816-38056887)
chr1 (14-56)||(12710836-12710878)
chr1 (14-56)||(24719551-24719593)
chr1 (133-186)||(45574176-45574230)
chr1 (133-185)||(23194669-23194722)
chr1 (118-185)||(8276133-8276201)
[»] scaffold0679 (1 HSPs)
scaffold0679 (179-278)||(1662-1761)
[»] chr6 (18 HSPs)
chr6 (179-278)||(28709442-28709541)
chr6 (118-196)||(25921832-25921910)
chr6 (85-186)||(29045104-29045205)
chr6 (88-180)||(25601439-25601531)
chr6 (14-136)||(18982461-18982583)
chr6 (94-159)||(35057412-35057477)
chr6 (133-188)||(13765186-13765242)
chr6 (133-188)||(23956702-23956758)
chr6 (133-188)||(31021878-31021934)
chr6 (94-177)||(13285598-13285681)
chr6 (94-157)||(18459176-18459239)
chr6 (94-157)||(18585549-18585612)
chr6 (88-186)||(24506228-24506327)
chr6 (207-261)||(15286054-15286108)
chr6 (14-56)||(15998858-15998900)
chr6 (14-56)||(19825527-19825569)
chr6 (118-185)||(19825630-19825698)
chr6 (133-177)||(23226014-23226058)
[»] scaffold0007 (4 HSPs)
scaffold0007 (14-162)||(16460-16609)
scaffold0007 (14-162)||(18742-18892)
scaffold0007 (94-186)||(158988-159080)
scaffold0007 (94-186)||(18979-19072)
[»] chr3 (20 HSPs)
chr3 (14-185)||(29907477-29907650)
chr3 (14-185)||(29948643-29948816)
chr3 (14-185)||(29997797-29997970)
chr3 (207-278)||(5842749-5842820)
chr3 (108-177)||(12917446-12917515)
chr3 (94-186)||(6805046-6805139)
chr3 (94-186)||(48631172-48631265)
chr3 (14-54)||(14641589-14641629)
chr3 (14-157)||(3160667-3160808)
chr3 (14-56)||(14520415-14520457)
chr3 (133-188)||(42367-42423)
chr3 (85-177)||(45803448-45803539)
chr3 (133-188)||(46722743-46722799)
chr3 (133-188)||(55291758-55291814)
chr3 (108-186)||(13522481-13522560)
chr3 (14-56)||(17208493-17208535)
chr3 (133-186)||(43549812-43549866)
chr3 (118-186)||(14641692-14641761)
chr3 (133-188)||(10555146-10555202)
chr3 (133-188)||(18890263-18890319)
[»] chr7 (23 HSPs)
chr7 (207-278)||(11391139-11391210)
chr7 (84-186)||(13315191-13315293)
chr7 (94-186)||(12754784-12754877)
chr7 (84-185)||(19282887-19282988)
chr7 (84-177)||(38295452-38295544)
chr7 (94-163)||(47975010-47975079)
chr7 (94-176)||(14274074-14274156)
chr7 (94-186)||(708640-708733)
chr7 (77-185)||(37539289-37539397)
chr7 (94-177)||(42565951-42566034)
chr7 (29-82)||(16496153-16496207)
chr7 (98-186)||(19195032-19195121)
chr7 (133-188)||(14105584-14105640)
chr7 (133-188)||(14415601-14415657)
chr7 (118-188)||(17070433-17070504)
chr7 (14-56)||(708470-708512)
chr7 (133-186)||(4325937-4325991)
chr7 (14-48)||(8513794-8513828)
chr7 (14-56)||(15575690-15575732)
chr7 (14-56)||(19195581-19195622)
chr7 (14-56)||(43745625-43745667)
chr7 (133-188)||(14188450-14188506)
chr7 (133-177)||(44190373-44190417)
[»] chr4 (14 HSPs)
chr4 (28-186)||(35660728-35660888)
chr4 (15-186)||(16296711-16296883)
chr4 (94-186)||(14549490-14549583)
chr4 (94-186)||(19434778-19434871)
chr4 (14-56)||(14631104-14631146)
chr4 (133-188)||(28386083-28386139)
chr4 (118-188)||(9638847-9638918)
chr4 (94-157)||(14477502-14477565)
chr4 (14-56)||(16296907-16296949)
chr4 (133-186)||(18230582-18230636)
chr4 (14-56)||(25513820-25513862)
chr4 (94-151)||(18462899-18462956)
chr4 (133-188)||(16277444-16277500)
chr4 (133-188)||(53387054-53387110)
[»] chr2 (18 HSPs)
chr2 (66-186)||(149598-149718)
chr2 (15-180)||(28652593-28652756)
chr2 (94-186)||(1383771-1383864)
chr2 (84-164)||(23801356-23801435)
chr2 (94-186)||(19647074-19647167)
chr2 (94-175)||(45535778-45535859)
chr2 (94-186)||(18388356-18388448)
chr2 (97-157)||(45535666-45535726)
chr2 (101-186)||(28345162-28345248)
chr2 (129-185)||(14183620-14183677)
chr2 (111-186)||(36734588-36734664)
chr2 (94-157)||(24884231-24884294)
chr2 (14-56)||(21315517-21315559)
chr2 (14-56)||(21335307-21335349)
chr2 (85-162)||(12626543-12626619)
chr2 (129-177)||(14179882-14179930)
chr2 (133-188)||(21072845-21072901)
chr2 (133-177)||(41301086-41301130)
[»] scaffold0026 (2 HSPs)
scaffold0026 (94-186)||(21962-22055)
scaffold0026 (94-140)||(9912-9958)
[»] chr5 (15 HSPs)
chr5 (94-186)||(36508862-36508955)
chr5 (14-56)||(16063720-16063762)
chr5 (94-157)||(17875927-17875990)
chr5 (94-177)||(21503989-21504072)
chr5 (133-188)||(27868731-27868787)
chr5 (14-53)||(6551331-6551370)
chr5 (94-157)||(31456721-31456784)
chr5 (14-56)||(18744843-18744885)
chr5 (133-186)||(33472720-33472774)
chr5 (29-82)||(36315304-36315358)
chr5 (108-180)||(21398931-21399003)
chr5 (133-188)||(24594220-24594276)
chr5 (133-188)||(24668314-24668370)
chr5 (133-188)||(24738083-24738139)
chr5 (133-188)||(24750852-24750908)
[»] scaffold0594 (1 HSPs)
scaffold0594 (85-164)||(2103-2181)
[»] scaffold0676 (2 HSPs)
scaffold0676 (66-186)||(2654-2774)
scaffold0676 (14-56)||(2850-2892)
[»] scaffold0149 (1 HSPs)
scaffold0149 (94-163)||(21404-21473)
[»] scaffold0148 (1 HSPs)
scaffold0148 (84-186)||(8681-8783)
[»] scaffold0021 (2 HSPs)
scaffold0021 (14-176)||(16958-17117)
scaffold0021 (14-176)||(26489-26648)
[»] scaffold0004 (1 HSPs)
scaffold0004 (98-173)||(66202-66277)
[»] scaffold0040 (1 HSPs)
scaffold0040 (94-186)||(106280-106373)
[»] scaffold0256 (1 HSPs)
scaffold0256 (118-176)||(1984-2042)
[»] scaffold0217 (1 HSPs)
scaffold0217 (94-175)||(28566-28647)
[»] chr8 (14 HSPs)
chr8 (94-186)||(20517175-20517268)
chr8 (94-175)||(20879325-20879406)
chr8 (85-164)||(12037275-12037353)
chr8 (94-157)||(22344993-22345056)
chr8 (94-157)||(22356653-22356716)
chr8 (14-56)||(4380658-4380700)
chr8 (14-56)||(18816336-18816378)
chr8 (14-56)||(21514660-21514702)
chr8 (133-188)||(8413905-8413961)
chr8 (133-188)||(19882787-19882843)
chr8 (97-157)||(21676713-21676773)
chr8 (94-186)||(42265675-42265767)
chr8 (94-177)||(22483630-22483713)
chr8 (14-56)||(36732453-36732495)
[»] scaffold0730 (1 HSPs)
scaffold0730 (84-186)||(6614-6716)
[»] scaffold0439 (1 HSPs)
scaffold0439 (108-186)||(12081-12160)
[»] scaffold0369 (1 HSPs)
scaffold0369 (17-56)||(15659-15698)
[»] scaffold1256 (1 HSPs)
scaffold1256 (14-56)||(2241-2283)
[»] scaffold1186 (1 HSPs)
scaffold1186 (14-56)||(1989-2031)
[»] scaffold0231 (1 HSPs)
scaffold0231 (14-56)||(17562-17604)
[»] scaffold0184 (1 HSPs)
scaffold0184 (29-82)||(385-439)
[»] scaffold0005 (1 HSPs)
scaffold0005 (14-56)||(186237-186279)
[»] scaffold0125 (1 HSPs)
scaffold0125 (14-180)||(28399-28563)
[»] scaffold0092 (1 HSPs)
scaffold0092 (94-150)||(38561-38617)
[»] scaffold0061 (2 HSPs)
scaffold0061 (14-73)||(14627-14687)
scaffold0061 (14-73)||(23685-23745)
[»] scaffold0878 (1 HSPs)
scaffold0878 (17-56)||(3466-3505)
[»] scaffold0337 (1 HSPs)
scaffold0337 (88-186)||(3045-3144)
[»] scaffold0230 (1 HSPs)
scaffold0230 (94-157)||(6913-6976)
[»] scaffold0213 (2 HSPs)
scaffold0213 (102-177)||(18965-19040)
scaffold0213 (14-56)||(19176-19218)
[»] scaffold0516 (1 HSPs)
scaffold0516 (14-56)||(5346-5388)
[»] scaffold0364 (1 HSPs)
scaffold0364 (133-186)||(8005-8059)
[»] scaffold0247 (1 HSPs)
scaffold0247 (14-56)||(1045-1087)
[»] scaffold0203 (1 HSPs)
scaffold0203 (14-56)||(17981-18023)
[»] scaffold0113 (1 HSPs)
scaffold0113 (95-177)||(35342-35424)
[»] scaffold0056 (1 HSPs)
scaffold0056 (14-56)||(18244-18286)
[»] scaffold0180 (1 HSPs)
scaffold0180 (94-151)||(28495-28552)
[»] scaffold0017 (1 HSPs)
scaffold0017 (94-175)||(23465-23546)
[»] scaffold0001 (2 HSPs)
scaffold0001 (140-188)||(169279-169328)
scaffold0001 (140-188)||(176632-176681)
[»] scaffold1800 (1 HSPs)
scaffold1800 (94-186)||(446-541)
[»] scaffold0308 (1 HSPs)
scaffold0308 (94-186)||(13234-13326)
[»] scaffold0220 (1 HSPs)
scaffold0220 (16-56)||(13918-13958)
[»] scaffold0151 (1 HSPs)
scaffold0151 (133-177)||(9946-9990)
[»] scaffold0116 (1 HSPs)
scaffold0116 (94-186)||(35630-35722)
[»] scaffold0058 (1 HSPs)
scaffold0058 (133-177)||(39969-40013)


Alignment Details
Target: scaffold0139 (Bit Score: 164; Significance: 1e-87; HSPs: 2)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 14 - 278
Target Start/End: Complemental strand, 23545 - 23294
Alignment:
Q  14 ataattctaaaaaggggtttaaccttgtagttgttgttagtttgaggattagagaaattaatgttagaatttaaaattgaattgttgaaagtgcaggtaa 113  Q
    |||| |||||||||||||| ||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| | ||||||    
T  23545 ataaatctaaaaaggggttaaaccttgcagttgttgttagtttgaggattagagaaattaaggttagaatttaaaattgaattgttgaaagagtaggtaa 23446  T
Q  114 tccaatgaattaaggtaataattggtgttcaggttgtaaaataatcataggaaaagtttcctataaatttggggtaagggttgtgtactcatgtgggtag 213  Q
                |||||||||||| ||||||  ||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  23445 ------------aggtaataattg-tgttcaaattgtagaataatcataggaagagtttcctataaatttggggtaagggttgtgtactcatgtgggtag 23359  T
Q  214 tgttgggttttgttttccattgcttttcatgatcttttgataaattcaatgttaaattcgtgtac 278  Q
    | |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||    
T  23358 ttttgggttttgttttccatcgcttttcatgatcttttgataaattcaatgttaaattcatgtac 23294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 56
Target Start/End: Original strand, 40204 - 40246
Alignment:
Q  14 ataattctaaaaaggggtttaaccttgtagttgttgttagttt 56  Q
    ||||||||||||| |||||||||| ||||||||||| ||||||    
T  40204 ataattctaaaaaagggtttaaccatgtagttgttgatagttt 40246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 97; Significance: 1e-47; HSPs: 23)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 15 - 197
Target Start/End: Original strand, 22145708 - 22145892
Alignment:
Q  15 taattctaaaaaggggtttaaccttgtagttgttgttag-tttgaggattagagaaattaatgttagaatttaaaattgaattgttgaaagtgcaggtaa 113  Q
    ||||||| |||| |||||||||||||||||||||||||| ||||||||||||| ||||||| ||||||| ||||||||||||||||||| | | ||||||    
T  22145708 taattctgaaaaagggtttaaccttgtagttgttgttaggtttgaggattagataaattaaggttagaaattaaaattgaattgttgaaggagtaggtaa 22145807  T
Q  114 tccaatgaattaaggtaataattggtgttcaggttgtaaaataatcataggaaaagtttccta-taaatttggggtaagggttgt 197  Q
    ||||||||||||| |||||||||| |||||| |||||| | |||||||||| | ||||| |||  ||||||||||| ||||||||    
T  22145808 tccaatgaattaaagtaataattgatgttcaagttgtagattaatcataggtagagttttctacaaaatttggggttagggttgt 22145892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 14 - 186
Target Start/End: Complemental strand, 8306617 - 8306444
Alignment:
Q  14 ataattctaaaaaggggtttaacct--tgtagttgttgttagttt-gaggattagagaaattaatgttagaatttaaaattgaattgttgaaagtgcagg 110  Q
    ||||||||||||||||||||||| |  ||| ||| |||||||||| || | ||| ||||||||  ||| ||| |||||||||| |||||||||| | |||    
T  8306617 ataattctaaaaaggggtttaacatgttgtcgtt-ttgttagttttgatg-ttatagaaattagggtttgaaattaaaattga-ttgttgaaagagtagg 8306521  T
Q  111 taatccaatgaattaaggtaataattggtgttcaggttgtaaaataatcataggaaaagtttcctat-aaatttggg 186  Q
    |||||| |||||||||||||||||||||||||||| ||||  ||||||||||||  ||||||||||| |||||||||    
T  8306520 taatccgatgaattaaggtaataattggtgttcagattgttgaataatcataggttaagtttcctatcaaatttggg 8306444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 94 - 177
Target Start/End: Original strand, 7052132 - 7052215
Alignment:
Q  94 attgttgaaagtgcaggtaatccaatgaattaaggtaataattggtgttcaggttgtaaaataatcataggaaaagtttcctat 177  Q
    ||||||||||| | ||||||||  |||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||    
T  7052132 attgttgaaagagtaggtaatctgatgaattaaggtaataattggtgttcaggttgtaaaataatcataggttaagtttcctat 7052215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 85 - 186
Target Start/End: Original strand, 17901913 - 17902014
Alignment:
Q  85 taaaattgaattgttgaaagtgcaggtaatccaatgaattaaggtaataattggtgttcaggttgtaaaataatcataggaaaagtttcctat-aaattt 183  Q
    ||||||||| |||||||||| | || |||||| ||||| |||||||||||||||||||||||||||| |||||||||||| | ||||| |||| ||||||    
T  17901913 taaaattga-ttgttgaaagagtagataatccgatgaactaaggtaataattggtgttcaggttgtagaataatcataggtagagttttctatcaaattt 17902011  T
Q  184 ggg 186  Q
    |||    
T  17902012 ggg 17902014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 94 - 186
Target Start/End: Original strand, 24723579 - 24723672
Alignment:
Q  94 attgttgaaagtgcaggtaatccaatgaattaaggtaataattggtgttcaggttgtaaaataatcataggaaaagtttcctat-aaatttggg 186  Q
    ||||||||||| | | |||||   |||||||||||||||||||||||||||||||||| ||||||||||||  ||||||||||| |||||||||    
T  24723579 attgttgaaagagtatgtaatatgatgaattaaggtaataattggtgttcaggttgtagaataatcataggttaagtttcctatcaaatttggg 24723672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 85 - 177
Target Start/End: Original strand, 21239154 - 21239245
Alignment:
Q  85 taaaattgaattgttgaaagtgcaggtaatccaatgaattaaggtaataattggtgttcaggttgtaaaataatcataggaaaagtttcctat 177  Q
    ||||||||| |||||||||| | ||||||||| ||||| |||||||||||||||||||||| ||||| |||||||||||| | ||||| ||||    
T  21239154 taaaattga-ttgttgaaagagtaggtaatccgatgaactaaggtaataattggtgttcagtttgtagaataatcataggtagagttttctat 21239245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 85 - 186
Target Start/End: Complemental strand, 6834110 - 6834006
Alignment:
Q  85 taaaattgaattgttgaaagtgcaggtaatccaatga---attaaggtaataattggtgttcaggttgtaaaataatcataggaaaagtttcctat-aaa 180  Q
    ||||||||| |||||||||| | ||||||||| ||||   | |||||||||||||||||||||||||||| |||||||||||| | ||||| |||| |||    
T  6834110 taaaattga-ttgttgaaagagtaggtaatccgatgatgaactaaggtaataattggtgttcaggttgtagaataatcataggtagagttttctatcaaa 6834012  T
Q  181 tttggg 186  Q
    ||||||    
T  6834011 tttggg 6834006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 94 - 186
Target Start/End: Original strand, 21188152 - 21188245
Alignment:
Q  94 attgttgaaagtgcaggtaatccaatgaattaaggtaataattggtgttcaggttgtaaaataatcataggaaaagtttcctat-aaatttggg 186  Q
    ||||||||||||| |||||||||||||||||||  ||| ||||| ||||||||||||| |||||  ||| | || ||||||||| |||||||||    
T  21188152 attgttgaaagtgtaggtaatccaatgaattaatataaaaattgatgttcaggttgtagaataagaatatgtaatgtttcctatcaaatttggg 21188245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 84 - 180
Target Start/End: Complemental strand, 35895041 - 35894946
Alignment:
Q  84 ttaaaattgaattgttgaaagtgcaggtaatccaatgaattaaggtaataattggtgttcaggttgtaaaataatcataggaaaagtttcctataaa 180  Q
    |||||||||| ||||||||||    |||||||| ||||| |||||||||||||||||||||||| ||  |||||||||| ||| ||||| |||||||    
T  35895041 ttaaaattga-ttgttgaaagaattggtaatccgatgaagtaaggtaataattggtgttcaggtggtggaataatcatatgaagagttttctataaa 35894946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 85 - 164
Target Start/End: Original strand, 21243848 - 21243926
Alignment:
Q  85 taaaattgaattgttgaaagtgcaggtaatccaatgaattaaggtaataattggtgttcaggttgtaaaataatcatagg 164  Q
    ||||||||| |||| ||||| | || |||||| |||||||| | ||||||||||||||||||||||| ||||||||||||    
T  21243848 taaaattga-ttgtagaaagagtagataatccgatgaattaggttaataattggtgttcaggttgtagaataatcatagg 21243926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 94 - 157
Target Start/End: Original strand, 44822249 - 44822312
Alignment:
Q  94 attgttgaaagtgcaggtaatccaatgaattaaggtaataattggtgttcaggttgtaaaataa 157  Q
    ||||||||||||| |||||||||||||||||||  ||  ||||| ||||||||||||| |||||    
T  44822249 attgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgttcaggttgtagaataa 44822312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 82
Target Start/End: Original strand, 14294866 - 14294920
Alignment:
Q  29 ggtttaaccttgtagttgttgttag-tttgaggattagagaaattaatgttagaa 82  Q
    ||||||||||||||||||| ||||| ||||||||||||||||||||  |||||||    
T  14294866 ggtttaaccttgtagttgtcgttaggtttgaggattagagaaattagggttagaa 14294920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 56
Target Start/End: Original strand, 28476775 - 28476817
Alignment:
Q  14 ataattctaaaaaggggtttaaccttgtagttgttgttagttt 56  Q
    |||||||| |||| |||||||||||||||||||||||||||||    
T  28476775 ataattctgaaaaagggtttaaccttgtagttgttgttagttt 28476817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 56
Target Start/End: Original strand, 38056713 - 38056755
Alignment:
Q  14 ataattctaaaaaggggtttaaccttgtagttgttgttagttt 56  Q
    |||||||| |||| |||||||||||||||||||||||||||||    
T  38056713 ataattctgaaaaagggtttaaccttgtagttgttgttagttt 38056755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 56
Target Start/End: Complemental strand, 50544883 - 50544841
Alignment:
Q  14 ataattctaaaaaggggtttaaccttgtagttgttgttagttt 56  Q
    |||||||| |||| |||||||||||||||||||||||||||||    
T  50544883 ataattctgaaaaagggtttaaccttgtagttgttgttagttt 50544841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 82
Target Start/End: Complemental strand, 51131370 - 51131316
Alignment:
Q  29 ggtttaaccttgtagttgttgttag-tttgaggattagagaaattaatgttagaa 82  Q
    ||||||||||||||||||| ||||| ||||||||||||||||||||  |||||||    
T  51131370 ggtttaaccttgtagttgtcgttaggtttgaggattagagaaattagggttagaa 51131316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 186
Target Start/End: Complemental strand, 22350602 - 22350510
Alignment:
Q  94 attgttgaaagtgcaggtaatccaatgaattaaggtaataattggtgttcaggttgtaaaataatcataggaaaagtttcctataaatttggg 186  Q
    ||||||||| ||| ||||||| |||||||||||  ||| ||||| ||||||||||||| | |||| ||| |  | ||||||||| ||||||||    
T  22350602 attgttgaaggtgtaggtaattcaatgaattaatataaaaattgatgttcaggttgtagagtaataataagtgaggtttcctatcaatttggg 22350510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 118 - 188
Target Start/End: Original strand, 38056816 - 38056887
Alignment:
Q  118 atgaattaaggtaataattggtgttcaggttgtaaaataatcataggaaaagtttcctat-aaatttggggt 188  Q
    |||||||| ||||||||||||||| || |||| | | ||||||||||  ||||||||||| |||||||||||    
T  38056816 atgaattagggtaataattggtgtccaagttgcagattaatcataggttaagtttcctatcaaatttggggt 38056887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 56
Target Start/End: Complemental strand, 12710878 - 12710836
Alignment:
Q  14 ataattctaaaaaggggtttaaccttgtagttgttgttagttt 56  Q
    |||||||| |||| |||||||| ||||||||||||||||||||    
T  12710878 ataattctgaaaaagggtttaatcttgtagttgttgttagttt 12710836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 56
Target Start/End: Original strand, 24719551 - 24719593
Alignment:
Q  14 ataattctaaaaaggggtttaaccttgtagttgttgttagttt 56  Q
    |||||||| |||| ||||||||||||||||||||| |||||||    
T  24719551 ataattctgaaaaagggtttaaccttgtagttgttattagttt 24719593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 133 - 186
Target Start/End: Original strand, 45574176 - 45574230
Alignment:
Q  133 aattggtgttcaggttgtaaaataatcataggaaaagtttcctat-aaatttggg 186  Q
    ||||| ||||||||||||| ||||||||||||  ||||||||||| |||||||||    
T  45574176 aattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttggg 45574230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 185
Target Start/End: Original strand, 23194669 - 23194722
Alignment:
Q  133 aattggtgttcaggttgtaaaataatcataggaaaagtttcctat-aaatttgg 185  Q
    ||||| ||||||||||||| ||||||||||||  ||||||||||| ||||||||    
T  23194669 aattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttgg 23194722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 118 - 185
Target Start/End: Original strand, 8276133 - 8276201
Alignment:
Q  118 atgaattaaggtaataattggtgttcaggttgtaaaataatcataggaaaagtttcctat-aaatttgg 185  Q
    |||||||| ||||||||||||||| || |||| | | ||||||||||  ||||||||||| ||||||||    
T  8276133 atgaattagggtaataattggtgtccaagttgcagattaatcataggttaagtttcctatcaaatttgg 8276201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0679 (Bit Score: 88; Significance: 3e-42; HSPs: 1)
Name: scaffold0679
Description:

Target: scaffold0679; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 179 - 278
Target Start/End: Original strand, 1662 - 1761
Alignment:
Q  179 aatttggggtaagggttgtgtactcatgtgggtagtgttgggttttgttttccattgcttttcatgatcttttgataaattcaatgttaaattcgtgtac 278  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  1662 aatttgggattagggttgtgtactcatgtgggtagtgttgggttttgttttccattgcttttcatgatcctttgataaattcaatgttaaattcgtgtac 1761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 88; Significance: 3e-42; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 179 - 278
Target Start/End: Complemental strand, 28709541 - 28709442
Alignment:
Q  179 aatttggggtaagggttgtgtactcatgtgggtagtgttgggttttgttttccattgcttttcatgatcttttgataaattcaatgttaaattcgtgtac 278  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  28709541 aatttgggattagggttgtgtactcatgtgggtagtgttgggttttgttttccattgcttttcatgatcctttgataaattcaatgttaaattcgtgtac 28709442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 118 - 196
Target Start/End: Complemental strand, 25921910 - 25921832
Alignment:
Q  118 atgaattaaggtaataattggtgttcaggttgtaaaataatcataggaaaagtttcctataaatttggggtaagggttg 196  Q
    ||||||||||||||| |||||||||||||||||| |||||||||||||||||||| |||||||||| |||| |||||||    
T  25921910 atgaattaaggtaatgattggtgttcaggttgtagaataatcataggaaaagttttctataaattttgggttagggttg 25921832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 85 - 186
Target Start/End: Complemental strand, 29045205 - 29045104
Alignment:
Q  85 taaaattgaattgttgaaagtgcaggtaatccaatgaattaaggtaataattggtgttcaggttgtaaaataatcataggaaaagtttcctat-aaattt 183  Q
    ||||||||| |||||||||| | ||||||||| ||||| |||||||||||||| ||||||||||||| |||||||||||| | ||||| |||| ||||||    
T  29045205 taaaattga-ttgttgaaagagtaggtaatccgatgaactaaggtaataattgatgttcaggttgtagaataatcataggtagagttttctatcaaattt 29045107  T
Q  184 ggg 186  Q
    |||    
T  29045106 ggg 29045104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 88 - 180
Target Start/End: Original strand, 25601439 - 25601531
Alignment:
Q  88 aattgaattgttgaaagtgcaggtaatccaatgaattaaggtaataattggtgttcaggttgtaaaataatcataggaaaagtttcctataaa 180  Q
    |||| ||||||| |||| | ||||||||||| |||||||||||||||||| |||||| |||||| |||||||||||||| | ||| |||||||    
T  25601439 aatttaattgttaaaagagtaggtaatccaaagaattaaggtaataattgatgttcatgttgtataataatcataggaagaattttctataaa 25601531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 14 - 136
Target Start/End: Complemental strand, 18982583 - 18982461
Alignment:
Q  14 ataattctaaaaaggggtttaaccttgtagttgttgtta-gtttgaggattagagaaattaatgttagaatttaaaattgaattgttgaaagtgcaggta 112  Q
    |||||||| |||| |||||||||||||||||||||| || |||||| ||||||||||||||  ||||||| |||||||||| ||| |||||| | |||||    
T  18982583 ataattctgaaaaagggtttaaccttgtagttgttgctaggtttgatgattagagaaattagggttagaa-ttaaaattgatttggtgaaagagtaggta 18982485  T
Q  113 atccaatgaattaaggtaataatt 136  Q
    ||   ||||||||  |||||||||    
T  18982484 atatgatgaattagagtaataatt 18982461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 94 - 159
Target Start/End: Complemental strand, 35057477 - 35057412
Alignment:
Q  94 attgttgaaagtgcaggtaatccaatgaattaaggtaataattggtgttcaggttgtaaaataatc 159  Q
    ||||||||||||| |||||||||||||||| | ||| | ||||| | ||||||||||| |||||||    
T  35057477 attgttgaaagtgtaggtaatccaatgaatcatggtgaaaattgttattcaggttgtagaataatc 35057412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 133 - 188
Target Start/End: Complemental strand, 13765242 - 13765186
Alignment:
Q  133 aattggtgttcaggttgtaaaataatcataggaaaagtttcctat-aaatttggggt 188  Q
    ||||| ||||||||||||| ||||||||||||  ||||||||||| |||||||||||    
T  13765242 aattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttggggt 13765186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 133 - 188
Target Start/End: Complemental strand, 23956758 - 23956702
Alignment:
Q  133 aattggtgttcaggttgtaaaataatcataggaaaagtttcctat-aaatttggggt 188  Q
    ||||| ||||||||||||| ||||||||||||  ||||||||||| |||||||||||    
T  23956758 aattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttggggt 23956702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 133 - 188
Target Start/End: Original strand, 31021878 - 31021934
Alignment:
Q  133 aattggtgttcaggttgtaaaataatcataggaaaagtttcctat-aaatttggggt 188  Q
    ||||| ||||||||||||| ||||||||||||  ||||||||||| |||||||||||    
T  31021878 aattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttggggt 31021934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 94 - 177
Target Start/End: Complemental strand, 13285681 - 13285598
Alignment:
Q  94 attgttgaaagtgcaggtaatccaatgaattaaggtaataattggtgttcaggttgtaaaataatcataggaaaagtttcctat 177  Q
    ||||||||||||| |||||||||||| ||| | ||| | ||||| | ||||||||||| ||||||| || |  |||||||||||    
T  13285681 attgttgaaagtgtaggtaatccaattaatcatggtgaaaattgttattcaggttgtagaataatcttaagttaagtttcctat 13285598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 94 - 157
Target Start/End: Complemental strand, 18459239 - 18459176
Alignment:
Q  94 attgttgaaagtgcaggtaatccaatgaattaaggtaataattggtgttcaggttgtaaaataa 157  Q
    ||||||||||||| ||| |||||||||||||||  ||| || || ||||||||||||| |||||    
T  18459239 attgttgaaagtgtaggaaatccaatgaattaacataaaaactgttgttcaggttgtagaataa 18459176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 94 - 157
Target Start/End: Complemental strand, 18585612 - 18585549
Alignment:
Q  94 attgttgaaagtgcaggtaatccaatgaattaaggtaataattggtgttcaggttgtaaaataa 157  Q
    ||||||||||||| | ||||| |||||||||||  ||| ||||| ||||||||||||| |||||    
T  18585612 attgttgaaagtgtatgtaattcaatgaattaacataagaattgatgttcaggttgtagaataa 18585549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 88 - 186
Target Start/End: Original strand, 24506228 - 24506327
Alignment:
Q  88 aattgaattgttgaaagtgcaggtaatccaatgaattaaggtaataattggtgttcaggttgtaaaataatcataggaaaagtttcctat-aaatttggg 186  Q
    |||| |||||||||||||| ||||||||||||||||||   ||| ||||| |||||  ||| || |||||| ||||| || ||||| ||| |||||||||    
T  24506228 aatttaattgttgaaagtgtaggtaatccaatgaattagtataaaaattgatgttcttgttttagaataataataggcaatgtttcttatcaaatttggg 24506327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 207 - 261
Target Start/End: Original strand, 15286054 - 15286108
Alignment:
Q  207 tgggtagtgttgggttttgttttccattgcttttcatgatcttttgataaattca 261  Q
    ||||||| || |||||||||||||||||  ||||||||||||||| || ||||||    
T  15286054 tgggtagggtagggttttgttttccattagttttcatgatcttttaatgaattca 15286108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 56
Target Start/End: Complemental strand, 15998900 - 15998858
Alignment:
Q  14 ataattctaaaaaggggtttaaccttgtagttgttgttagttt 56  Q
    |||||||| |||| | |||||||||||||||||||||||||||    
T  15998900 ataattctgaaaaagagtttaaccttgtagttgttgttagttt 15998858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 56
Target Start/End: Original strand, 19825527 - 19825569
Alignment:
Q  14 ataattctaaaaaggggtttaaccttgtagttgttgttagttt 56  Q
    |||||||| |||| || ||||||||||||||||||||||||||    
T  19825527 ataattctgaaaaaggttttaaccttgtagttgttgttagttt 19825569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 118 - 185
Target Start/End: Original strand, 19825630 - 19825698
Alignment:
Q  118 atgaattaaggtaataattggtgttcaggttgtaaaataatcataggaaaagtttcctat-aaatttgg 185  Q
    |||||||| ||||||||||||||| || |||| | | ||||||||||  ||||||||||| ||||||||    
T  19825630 atgaattagggtaataattggtgtccaagttgcagattaatcataggttaagtttcctatcaaatttgg 19825698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 133 - 177
Target Start/End: Original strand, 23226014 - 23226058
Alignment:
Q  133 aattggtgttcaggttgtaaaataatcataggaaaagtttcctat 177  Q
    ||||| ||||||||||||| ||||||||||||  |||||||||||    
T  23226014 aattgatgttcaggttgtagaataatcataggttaagtttcctat 23226058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 74; Significance: 6e-34; HSPs: 4)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 14 - 162
Target Start/End: Original strand, 16460 - 16609
Alignment:
Q  14 ataattctaaaaaggggtttaaccttgtagttgttgttag-tttgaggattagagaaattaatgttagaatttaaaattgaattgttgaaagtgcaggta 112  Q
    |||||||| |||| |||||||||||||||||||||||||| ||||| ||||||||||||||  ||||||  |||||||||| |||||||||| | |||||    
T  16460 ataattctgaaaaagggtttaaccttgtagttgttgttaggtttgatgattagagaaattagggttagagattaaaattgatttgttgaaagagtaggta 16559  T
Q  113 atccaatgaattaaggtaataattggtgttcaggttgtaaaataatcata 162  Q
    ||   |||||||| |||||||||||||||| |||||| | ||||||||||    
T  16560 atatgatgaattagggtaataattggtgtttaggttgcagaataatcata 16609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 14 - 162
Target Start/End: Original strand, 18742 - 18892
Alignment:
Q  14 ataattctaaaaaggggtttaaccttgtagttgttgttagtt--tgaggattagagaaattaatgttagaatttaaaattgaattgttgaaagtgcaggt 111  Q
    |||||||| ||||  |||||| |||||||||||||||||| |  ||| ||||||||||||||  ||||||  |||||||||| |||||||||| | ||||    
T  18742 ataattcttaaaaacggtttagccttgtagttgttgttaggtcatgatgattagagaaattagggttagagattaaaattgatttgttgaaagagtaggt 18841  T
Q  112 aatccaatgaattaaggtaataattggtgttcaggttgtaaaataatcata 162  Q
    |||  ||||||||| |||||||||||||||| |||||| | ||| ||||||    
T  18842 aatataatgaattagggtaataattggtgtttaggttggagaatgatcata 18892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 94 - 186
Target Start/End: Original strand, 158988 - 159080
Alignment:
Q  94 attgttgaaagtgcaggtaatccaatgaattaaggtaataattggtgttcaggttgtaaaataatcataggaaaagtttcctataaatttggg 186  Q
    ||||||||| ||| |||| ||||||||||||||  ||| ||||| ||||||||||||| | |||| ||| | || ||||||||| ||||||||    
T  158988 attgttgaaggtgtaggtgatccaatgaattaatataaaaattgatgttcaggttgtagagtaataataagtaaggtttcctatcaatttggg 159080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 94 - 186
Target Start/End: Original strand, 18979 - 19072
Alignment:
Q  94 attgttgaaagtgcaggtaatccaatgaattaaggtaataattggtgttcaggttgtaaaataatcataggaaaagtttcctat-aaatttggg 186  Q
    ||||||||||||| ||||||||||||||| |||  ||| ||| | ||||||||||||| |||||  |||||  | ||||||||| |||||||||    
T  18979 attgttgaaagtgtaggtaatccaatgaactaatataaaaatcgatgttcaggttgtagaataacaataggtgatgtttcctatcaaatttggg 19072  T

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Target: chr3 (Bit Score: 74; Significance: 6e-34; HSPs: 20)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 14 - 185
Target Start/End: Complemental strand, 29907650 - 29907477
Alignment:
Q  14 ataattctaaaaaggggtttaaccttgtagttgttgttag-tttgaggattagagaaattaatgttagaatttaaaattgaattgttgaaagtgcaggta 112  Q
    |||||||| |||| |||||||||||||||||||||||||| ||||| ||||||||||||||  ||||||| ||||||||||||||||||||||| |||||    
T  29907650 ataattctgaaaaagggtttaaccttgtagttgttgttaggtttgatgattagagaaattagggttagaaattaaaattgaattgttgaaagtgtaggta 29907551  T
Q  113 atccaatgaattaaggtaataattggtgttcaggttgtaaaataatcataggaaaagtttcctat-aaatttgg 185  Q
    ||   |||||||| |||| | ||||||||||  |||| | ||||| |||||| | | |||||||| ||||||||    
T  29907550 atatgatgaattagggtatttattggtgttcgagttgcagaataaacataggtagaatttcctatcaaatttgg 29907477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 14 - 185
Target Start/End: Complemental strand, 29948816 - 29948643
Alignment:
Q  14 ataattctaaaaaggggtttaaccttgtagttgttgttag-tttgaggattagagaaattaatgttagaatttaaaattgaattgttgaaagtgcaggta 112  Q
    |||||||| |||| |||||||||||||||||||||||||| ||||| ||||||||||||||  ||||||| ||||||||||||||||||||||| |||||    
T  29948816 ataattctgaaaaagggtttaaccttgtagttgttgttaggtttgatgattagagaaattagggttagaaattaaaattgaattgttgaaagtgtaggta 29948717  T
Q  113 atccaatgaattaaggtaataattggtgttcaggttgtaaaataatcataggaaaagtttcctat-aaatttgg 185  Q
    ||   |||||||| |||| | ||||||||||  |||| | ||||| |||||| | | |||||||| ||||||||    
T  29948716 atatgatgaattagggtatttattggtgttcgagttgcagaataaacataggtagaatttcctatcaaatttgg 29948643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 14 - 185
Target Start/End: Complemental strand, 29997970 - 29997797
Alignment:
Q  14 ataattctaaaaaggggtttaaccttgtagttgttgttag-tttgaggattagagaaattaatgttagaatttaaaattgaattgttgaaagtgcaggta 112  Q
    |||||||| |||| |||||||||||||||||||||||||| ||||| ||||||||||||||  ||||||| ||||||||||||||||||||||| |||||    
T  29997970 ataattctgaaaaagggtttaaccttgtagttgttgttaggtttgatgattagagaaattagggttagaaattaaaattgaattgttgaaagtgtaggta 29997871  T
Q  113 atccaatgaattaaggtaataattggtgttcaggttgtaaaataatcataggaaaagtttcctat-aaatttgg 185  Q
    ||   |||||||| |||| | ||||||||||  |||| | ||||| |||||| | | |||||||| ||||||||    
T  29997870 atatgatgaattagggtatttattggtgttcgagttgcagaataaacataggtagaatttcctatcaaatttgg 29997797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 207 - 278
Target Start/End: Complemental strand, 5842820 - 5842749
Alignment:
Q  207 tgggtagtgttgggttttgttttccattgcttttcatgatcttttgataaattcaatgttaaattcgtgtac 278  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  5842820 tgggtagtgttgggttttgttttccattgcttttcatgatcctttgataaattcaatgttaaattcgtgtac 5842749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 108 - 177
Target Start/End: Original strand, 12917446 - 12917515
Alignment:
Q  108 aggtaatccaatgaattaaggtaataattggtgttcaggttgtaaaataatcataggaaaagtttcctat 177  Q
    ||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| | ||||||||||    
T  12917446 aggtaatccgatgaagtaaggtaataattggtgttcaggttgtaaaataatcataggtagagtttcctat 12917515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 94 - 186
Target Start/End: Original strand, 6805046 - 6805139
Alignment:
Q  94 attgttgaaagtgcaggtaatccaatgaattaaggtaataattggtgttcaggttgtaaaataatcataggaaaagtttcctat-aaatttggg 186  Q
    ||||||||||| | ||||||||  |||||||||||||||||||||||||||||||||| |||||||||| |  |||||| |||| |||||||||    
T  6805046 attgttgaaagagtaggtaatctgatgaattaaggtaataattggtgttcaggttgtagaataatcatatgttaagttttctatcaaatttggg 6805139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 94 - 186
Target Start/End: Complemental strand, 48631265 - 48631172
Alignment:
Q  94 attgttgaaagtgcaggtaatccaatgaattaaggtaataattggtgttcaggttgtaaaataatcataggaaaagtttcctat-aaatttggg 186  Q
    ||||||||||||| ||||||| |||||||||||  ||| ||||| ||||||||||||| |||||  ||||| || ||||||||| |||||||||    
T  48631265 attgttgaaagtgtaggtaattcaatgaattaacataagaattgatgttcaggttgtagaataacaataggtaatgtttcctatcaaatttggg 48631172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 14 - 54
Target Start/End: Original strand, 14641589 - 14641629
Alignment:
Q  14 ataattctaaaaaggggtttaaccttgtagttgttgttagt 54  Q
    ||||||||||||| |||||||||||||||||||||||||||    
T  14641589 ataattctaaaaaagggtttaaccttgtagttgttgttagt 14641629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 14 - 157
Target Start/End: Original strand, 3160667 - 3160808
Alignment:
Q  14 ataattctaaaaaggggtttaaccttgtagttgttgttagtttgaggattagagaaattaatgttagaatttaaaattgaattgttgaaagtgcaggtaa 113  Q
    ||||||||||||| ||||||||| |||||||||||| ||||||    |||| ||||||| | |||  ||||  || ||| ||||||||||| | ||||||    
T  3160667 ataattctaaaaatgggtttaactttgtagttgttgatagttttgatattatagaaatt-aggtttaaattgcaatttg-attgttgaaagagtaggtaa 3160764  T
Q  114 tccaatgaattaaggtaataattggtgttcaggttgtaaaataa 157  Q
    | |||||||||||  ||| ||||| |||| |||||||| |||||    
T  3160765 ttcaatgaattaatataaaaattgatgtttaggttgtagaataa 3160808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 56
Target Start/End: Complemental strand, 14520457 - 14520415
Alignment:
Q  14 ataattctaaaaaggggtttaaccttgtagttgttgttagttt 56  Q
    |||||||||||||  ||||||||||||||||||||||||||||    
T  14520457 ataattctaaaaaaaggtttaaccttgtagttgttgttagttt 14520415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 133 - 188
Target Start/End: Complemental strand, 42423 - 42367
Alignment:
Q  133 aattggtgttcaggttgtaaaataatcataggaaaagtttcctat-aaatttggggt 188  Q
    ||||| ||||||||||||| ||||||||||||  ||||||||||| |||||||||||    
T  42423 aattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttggggt 42367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 85 - 177
Target Start/End: Original strand, 45803448 - 45803539
Alignment:
Q  85 taaaattgaattgttgaaagtgcaggtaatccaatgaattaaggtaataattggtgttcaggttgtaaaataatcataggaaaagtttcctat 177  Q
    ||||||||| |||||||||| | ||||||||| |||||||||  ||| ||||| ||| ||||||||| ||||| ||||||   ||||||||||    
T  45803448 taaaattga-ttgttgaaagagtaggtaatccgatgaattaacataagaattgatgtccaggttgtagaataaacataggttgagtttcctat 45803539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 133 - 188
Target Start/End: Original strand, 46722743 - 46722799
Alignment:
Q  133 aattggtgttcaggttgtaaaataatcataggaaaagtttcctat-aaatttggggt 188  Q
    ||||| ||||||||||||| ||||||||||||  ||||||||||| |||||||||||    
T  46722743 aattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttggggt 46722799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 133 - 188
Target Start/End: Original strand, 55291758 - 55291814
Alignment:
Q  133 aattggtgttcaggttgtaaaataatcataggaaaagtttcctat-aaatttggggt 188  Q
    ||||| ||||||||||||| ||||||||||||  ||||||||||| |||||||||||    
T  55291758 aattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttggggt 55291814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 108 - 186
Target Start/End: Original strand, 13522481 - 13522560
Alignment:
Q  108 aggtaatccaatgaattaaggtaataattggtgttcaggttgtaaaataatcataggaaaagtttcctat-aaatttggg 186  Q
    |||||||||||||||||||  ||| ||||| ||||||||||||| |||||  |||||  | ||||||||| |||||||||    
T  13522481 aggtaatccaatgaattaacataagaattgatgttcaggttgtagaataacaataggtgatgtttcctatcaaatttggg 13522560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 56
Target Start/End: Complemental strand, 17208535 - 17208493
Alignment:
Q  14 ataattctaaaaaggggtttaaccttgtagttgttgttagttt 56  Q
    |||||||| |||| || ||||||||||||||||||||||||||    
T  17208535 ataattctgaaaaaggatttaaccttgtagttgttgttagttt 17208493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 133 - 186
Target Start/End: Original strand, 43549812 - 43549866
Alignment:
Q  133 aattggtgttcaggttgtaaaataatcataggaaaagtttcctat-aaatttggg 186  Q
    ||||| ||||||||||||| ||||||||||||  ||||||||||| |||||||||    
T  43549812 aattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttggg 43549866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 186
Target Start/End: Original strand, 14641692 - 14641761
Alignment:
Q  118 atgaattaaggtaataattggtgttcaggttgtaaaataatcataggaaaagtttcctat-aaatttggg 186  Q
    |||||||| ||||||||||||||| || |||| | | ||||||||||  ||||||||||| |||||||||    
T  14641692 atgaattagggtaataattggtgtccaagttgcagattaatcataggttaagtttcctatcaaatttggg 14641761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 133 - 188
Target Start/End: Complemental strand, 10555202 - 10555146
Alignment:
Q  133 aattggtgttcaggttgtaaaataatcataggaaaagtttcctat-aaatttggggt 188  Q
    ||||| ||||||||| ||| ||||||||||||  ||||||||||| |||||||||||    
T  10555202 aattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggt 10555146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 133 - 188
Target Start/End: Complemental strand, 18890319 - 18890263
Alignment:
Q  133 aattggtgttcaggttgtaaaataatcataggaaaagtttcctat-aaatttggggt 188  Q
    ||||| ||||||||||||  ||||||||||||  ||||||||||| |||||||||||    
T  18890319 aattgatgttcaggttgtggaataatcataggttaagtttcctatcaaatttggggt 18890263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 68; Significance: 2e-30; HSPs: 23)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 207 - 278
Target Start/End: Original strand, 11391139 - 11391210
Alignment:
Q  207 tgggtagtgttgggttttgttttccattgcttttcatgatcttttgataaattcaatgttaaattcgtgtac 278  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  11391139 tgggtagtgttgggttttgttttccattgcttttcatgatcctttgataaattcaatgttaaattcgtgtac 11391210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 84 - 186
Target Start/End: Original strand, 13315191 - 13315293
Alignment:
Q  84 ttaaaattgaattgttgaaagtgcaggtaatccaatgaattaaggtaataattggtgttcaggttgtaaaataatcataggaaaagtttcctat-aaatt 182  Q
    |||||||||| |||||||||| | |||||| |||||||||||||| |||||||||||||||||||||| |||||||||||| | ||||| |||| |||||    
T  13315191 ttaaaattga-ttgttgaaagagtaggtaacccaatgaattaaggaaataattggtgttcaggttgtagaataatcataggtagagttttctatcaaatt 13315289  T
Q  183 tggg 186  Q
    ||||    
T  13315290 tggg 13315293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 94 - 186
Target Start/End: Original strand, 12754784 - 12754877
Alignment:
Q  94 attgttgaaagtgcaggtaatccaatgaattaaggtaataattggtgttcaggttgtaaaataatcataggaaaagtttcctat-aaatttggg 186  Q
    ||||||||||| | ||||||||  ||||||||| |||||||||||||||||||||||| ||||||||||||  ||||||||||| |||||||||    
T  12754784 attgttgaaagagtaggtaatctgatgaattaaagtaataattggtgttcaggttgtagaataatcataggttaagtttcctatcaaatttggg 12754877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 84 - 185
Target Start/End: Complemental strand, 19282988 - 19282887
Alignment:
Q  84 ttaaaattgaattgttgaaagtgcaggtaatccaatgaattaaggtaataattggtgttcaggttgtaaaataatcataggaaaagtttcctat-aaatt 182  Q
    |||||||||| |||||||||| | ||||||||| ||||| |||||||||||||||| ||||||||||| |||||||||||| | ||||| |||| |||||    
T  19282988 ttaaaattga-ttgttgaaagagtaggtaatccgatgaactaaggtaataattggtcttcaggttgtagaataatcataggtagagttttctatcaaatt 19282890  T
Q  183 tgg 185  Q
    |||    
T  19282889 tgg 19282887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 84 - 177
Target Start/End: Complemental strand, 38295544 - 38295452
Alignment:
Q  84 ttaaaattgaattgttgaaagtgcaggtaatccaatgaattaaggtaataattggtgttcaggttgtaaaataatcataggaaaagtttcctat 177  Q
    |||||||||| |||||| ||| | ||||||||| ||||| ||||||||||||||||||||||| |||| |||||||||||| | ||||||||||    
T  38295544 ttaaaattga-ttgttgcaagagtaggtaatccgatgaagtaaggtaataattggtgttcaggatgtagaataatcataggtagagtttcctat 38295452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 94 - 163
Target Start/End: Original strand, 47975010 - 47975079
Alignment:
Q  94 attgttgaaagtgcaggtaatccaatgaattaaggtaataattggtgttcaggttgtaaaataatcatag 163  Q
    |||||||||||   ||||||||| |||||||||||||||||||||||||||||||||| |||||||||||    
T  47975010 attgttgaaagattaggtaatccgatgaattaaggtaataattggtgttcaggttgtagaataatcatag 47975079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 94 - 176
Target Start/End: Complemental strand, 14274156 - 14274074
Alignment:
Q  94 attgttgaaagtgcaggtaatccaatgaattaaggtaataattggtgttcaggttgtaaaataatcataggaaaagtttccta 176  Q
    ||||||||||||| |||||||||||||||||||  ||  ||||| ||||||||||||| ||||||||||||  ||||||||||    
T  14274156 attgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgttcaggttgtagaataatcataggttaagtttccta 14274074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 94 - 186
Target Start/End: Original strand, 708640 - 708733
Alignment:
Q  94 attgttgaaagtgcaggtaatccaatgaattaaggtaataattggtgttcaggttgtaaaataatcataggaaaagtttcctat-aaatttggg 186  Q
    ||||||||||| | ||| |||   ||| ||||||||||||||||||||| |||||||| ||||||||||||  ||||||||||| |||||||||    
T  708640 attgttgaaagagtaggcaatatgatggattaaggtaataattggtgtttaggttgtagaataatcataggttaagtttcctatcaaatttggg 708733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 77 - 185
Target Start/End: Complemental strand, 37539397 - 37539289
Alignment:
Q  77 ttagaatttaaaattgaattgttgaaagtgcaggtaatccaatgaattaaggtaataattggtgttcaggttgtaaaataatcataggaaaagtttccta 176  Q
    ||||||||| || |||| |||||||||||| |||||||||||||||| | ||| | ||||| | ||||||||||| ||||||| ||||  ||||||||||    
T  37539397 ttagaatttcaatttga-ttgttgaaagtgtaggtaatccaatgaatcatggtgaaaattgttattcaggttgtagaataatcttaggttaagtttccta 37539299  T
Q  177 t-aaatttgg 185  Q
    | ||||||||    
T  37539298 tcaaatttgg 37539289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 94 - 177
Target Start/End: Original strand, 42565951 - 42566034
Alignment:
Q  94 attgttgaaagtgcaggtaatccaatgaattaaggtaataattggtgttcaggttgtaaaataatcataggaaaagtttcctat 177  Q
    ||||||||||||| | |||||||||||||||||  ||  ||||| ||||||||||||| |||||  ||||| || |||||||||    
T  42565951 attgttgaaagtgtacgtaatccaatgaattaacatagaaattgatgttcaggttgtagaataacaataggtaatgtttcctat 42566034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 82
Target Start/End: Complemental strand, 16496207 - 16496153
Alignment:
Q  29 ggtttaaccttgtagttgttgttag-tttgaggattagagaaattaatgttagaa 82  Q
    ||||||||||||||||||| ||||| ||||||||||||||||||||  |||||||    
T  16496207 ggtttaaccttgtagttgtcgttaggtttgaggattagagaaattagggttagaa 16496153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 98 - 186
Target Start/End: Complemental strand, 19195121 - 19195032
Alignment:
Q  98 ttgaaagtgcaggtaatccaatgaattaaggtaataattggtgttcaggttgtaaaataatcataggaaaagtttcctat-aaatttggg 186  Q
    ||||||||| | |||||||||||||| | ||| | ||||| | ||||| ||||| ||||||||||||  ||||||||||| |||||||||    
T  19195121 ttgaaagtgtatgtaatccaatgaatcatggtgagaattgttattcagattgtagaataatcataggttaagtttcctatcaaatttggg 19195032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 133 - 188
Target Start/End: Original strand, 14105584 - 14105640
Alignment:
Q  133 aattggtgttcaggttgtaaaataatcataggaaaagtttcctat-aaatttggggt 188  Q
    ||||| ||||||||||||| ||||||||||||  ||||||||||| |||||||||||    
T  14105584 aattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttggggt 14105640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 133 - 188
Target Start/End: Original strand, 14415601 - 14415657
Alignment:
Q  133 aattggtgttcaggttgtaaaataatcataggaaaagtttcctat-aaatttggggt 188  Q
    ||||| ||||||||||||| ||||||||||||  ||||||||||| |||||||||||    
T  14415601 aattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttggggt 14415657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 118 - 188
Target Start/End: Original strand, 17070433 - 17070504
Alignment:
Q  118 atgaattaaggtaataattggtgttcaggttgtaaaataatcataggaaaagtttcctat-aaatttggggt 188  Q
    |||||||| ||||||||||||||| || |||| | | ||||||||||  ||||||||||| |||||||||||    
T  17070433 atgaattagggtaataattggtgtccaagttgcagattaatcataggttaagtttcctatcaaatttggggt 17070504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 56
Target Start/End: Original strand, 708470 - 708512
Alignment:
Q  14 ataattctaaaaaggggtttaaccttgtagttgttgttagttt 56  Q
    |||||||| |||| ||||||||||||||||||| |||||||||    
T  708470 ataattctgaaaaagggtttaaccttgtagttgctgttagttt 708512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 133 - 186
Target Start/End: Complemental strand, 4325991 - 4325937
Alignment:
Q  133 aattggtgttcaggttgtaaaataatcataggaaaagtttcctat-aaatttggg 186  Q
    ||||| ||||||||||||| ||||||||||||  ||||||||||| |||||||||    
T  4325991 aattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttggg 4325937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 48
Target Start/End: Original strand, 8513794 - 8513828
Alignment:
Q  14 ataattctaaaaaggggtttaaccttgtagttgtt 48  Q
    ||||||||||||| |||||||||||||||||||||    
T  8513794 ataattctaaaaaagggtttaaccttgtagttgtt 8513828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 56
Target Start/End: Original strand, 15575690 - 15575732
Alignment:
Q  14 ataattctaaaaaggggtttaaccttgtagttgttgttagttt 56  Q
    |||||||| |||| ||||||||||||||| |||||||||||||    
T  15575690 ataattctgaaaaagggtttaaccttgtacttgttgttagttt 15575732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 56
Target Start/End: Complemental strand, 19195622 - 19195581
Alignment:
Q  14 ataattctaaaaaggggtttaaccttgtagttgttgttagttt 56  Q
    |||||||| ||||||| ||||||||||||||||||||||||||    
T  19195622 ataattctgaaaaggg-tttaaccttgtagttgttgttagttt 19195581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 56
Target Start/End: Complemental strand, 43745667 - 43745625
Alignment:
Q  14 ataattctaaaaaggggtttaaccttgtagttgttgttagttt 56  Q
    |||||| | |||| |||||||||||||||||||||||||||||    
T  43745667 ataattatgaaaaagggtttaaccttgtagttgttgttagttt 43745625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 133 - 188
Target Start/End: Original strand, 14188450 - 14188506
Alignment:
Q  133 aattggtgttcaggttgtaaaataatcataggaaaagtttcctat-aaatttggggt 188  Q
    ||||| |||||| |||||| ||||||||||||  ||||||||||| |||||||||||    
T  14188450 aattgatgttcaagttgtagaataatcataggttaagtttcctatcaaatttggggt 14188506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 133 - 177
Target Start/End: Original strand, 44190373 - 44190417
Alignment:
Q  133 aattggtgttcaggttgtaaaataatcataggaaaagtttcctat 177  Q
    ||||| ||||||||||||| ||||||||||||  |||||||||||    
T  44190373 aattgatgttcaggttgtagaataatcataggttaagtttcctat 44190417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 67; Significance: 9e-30; HSPs: 14)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 28 - 186
Target Start/End: Complemental strand, 35660888 - 35660728
Alignment:
Q  28 gggtttaaccttgtagttgttgttag--tttgaggattagagaaattaatgttagaatttaaaattgaattgttgaaagtgcaggtaatccaatgaatta 125  Q
    ||||||||| | || ||||||||| |  ||||| ||||||||||||||  ||| |||||||||||||| ||||||| || | ||||||||| ||||| ||    
T  35660888 gggtttaacatggttgttgttgtttgattttgatgattagagaaattagggtttgaatttaaaattga-ttgttgagagagtaggtaatccgatgaagta 35660790  T
Q  126 aggtaataattggtgttcaggttgtaaaataatcataggaaaagtttcctat-aaatttggg 186  Q
    |||||||||||||||||||||||||| |||||||||| |  ||||||||||| |||||||||    
T  35660789 aggtaataattggtgttcaggttgtagaataatcatatgttaagtttcctatcaaatttggg 35660728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 15 - 186
Target Start/End: Complemental strand, 16296883 - 16296711
Alignment:
Q  15 taattctaaaaaggggtttaacct--tgtagttgttgttagttt-gaggattagagaaattaatgttagaatttaaaattgaattgttgaaagtgcaggt 111  Q
    |||||||||||||||||||||| |  ||| ||| |||||||||| || | ||| ||||||||  ||| ||| |||||||||| |||||||||| | ||||    
T  16296883 taattctaaaaaggggtttaacatattgttgtt-ttgttagttttgatg-ttatagaaattagggtttgaaattaaaattga-ttgttgaaagagtaggt 16296787  T
Q  112 aatccaatgaattaaggtaataattggtgttcaggttgtaaaataatcataggaaaagtttcctat-aaatttggg 186  Q
    ||||| |||||||||||||||||||||||||||||||||  ||||||||||||  ||||||||||| |||||||||    
T  16296786 aatccgatgaattaaggtaataattggtgttcaggttgttgaataatcataggttaagtttcctatcaaatttggg 16296711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 94 - 186
Target Start/End: Complemental strand, 14549583 - 14549490
Alignment:
Q  94 attgttgaaagtgcaggtaatccaatgaattaaggtaataattggtgttcaggttgtaaaataatcataggaaaagtttcctat-aaatttggg 186  Q
    ||||||||||| | | ||||||  |||||||||||||||||||||||||||||||||| |||||||||| |  ||||||||||| |||||||||    
T  14549583 attgttgaaagagtatgtaatctgatgaattaaggtaataattggtgttcaggttgtagaataatcatatgttaagtttcctatcaaatttggg 14549490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 94 - 186
Target Start/End: Original strand, 19434778 - 19434871
Alignment:
Q  94 attgttgaaagtgcaggtaatccaatgaattaaggtaataattggtgttcaggttgtaaaataatcataggaaaagtttcctat-aaatttggg 186  Q
    ||||||||||| | ||||||||  ||||||||| | |||||||||||||||||||||| ||||||||||||  ||||||||||| |||||||||    
T  19434778 attgttgaaagagtaggtaatctgatgaattaaagaaataattggtgttcaggttgtagaataatcataggttaagtttcctatcaaatttggg 19434871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 56
Target Start/End: Complemental strand, 14631146 - 14631104
Alignment:
Q  14 ataattctaaaaaggggtttaaccttgtagttgttgttagttt 56  Q
    |||||||| |||| |||||||||||||||||||||||||||||    
T  14631146 ataattctgaaaaagggtttaaccttgtagttgttgttagttt 14631104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 133 - 188
Target Start/End: Complemental strand, 28386139 - 28386083
Alignment:
Q  133 aattggtgttcaggttgtaaaataatcataggaaaagtttcctat-aaatttggggt 188  Q
    ||||| ||||||||||||| ||||||||||||  ||||||||||| |||||||||||    
T  28386139 aattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttggggt 28386083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 118 - 188
Target Start/End: Complemental strand, 9638918 - 9638847
Alignment:
Q  118 atgaattaaggtaataattggtgttcaggttgtaaaataatcataggaaaagtttcctat-aaatttggggt 188  Q
    |||||||| ||||||||||||||| || |||| | | ||||||||||  ||||||||||| |||||||||||    
T  9638918 atgaattagggtaataattggtgtccaagttgcagattaatcataggttaagtttcctatcaaatttggggt 9638847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 94 - 157
Target Start/End: Complemental strand, 14477565 - 14477502
Alignment:
Q  94 attgttgaaagtgcaggtaatccaatgaattaaggtaataattggtgttcaggttgtaaaataa 157  Q
    ||||||||||||| |||||||||||||||||||  ||  ||||| ||||||| ||||| |||||    
T  14477565 attgttgaaagtgtaggtaatccaatgaattaacatagaaattgatgttcagattgtagaataa 14477502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 56
Target Start/End: Complemental strand, 16296949 - 16296907
Alignment:
Q  14 ataattctaaaaaggggtttaaccttgtagttgttgttagttt 56  Q
    |||||||| |||| ||||||||||| |||||||||||||||||    
T  16296949 ataattctgaaaaagggtttaacctggtagttgttgttagttt 16296907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 133 - 186
Target Start/End: Complemental strand, 18230636 - 18230582
Alignment:
Q  133 aattggtgttcaggttgtaaaataatcataggaaaagtttcctat-aaatttggg 186  Q
    ||||| |||||||||||||  |||||||||||| ||||||||||| |||||||||    
T  18230636 aattgatgttcaggttgtaggataatcataggataagtttcctatcaaatttggg 18230582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 56
Target Start/End: Complemental strand, 25513862 - 25513820
Alignment:
Q  14 ataattctaaaaaggggtttaaccttgtagttgttgttagttt 56  Q
    |||||||| |||| ||||||||| |||||||||||||||||||    
T  25513862 ataattctgaaaaagggtttaacattgtagttgttgttagttt 25513820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 94 - 151
Target Start/End: Complemental strand, 18462956 - 18462899
Alignment:
Q  94 attgttgaaagtgcaggtaatccaatgaattaaggtaataattggtgttcaggttgta 151  Q
    ||||||||||||| |||||||||||||||||||  | | ||||| ||||||| |||||    
T  18462956 attgttgaaagtgtaggtaatccaatgaattaacatgaaaattgatgttcagattgta 18462899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 133 - 188
Target Start/End: Original strand, 16277444 - 16277500
Alignment:
Q  133 aattggtgttcaggttgtaaaataatcataggaaaagtttcctat-aaatttggggt 188  Q
    ||||| ||||||||| ||| ||||||||||||  ||||||||||| |||||||||||    
T  16277444 aattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggt 16277500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 133 - 188
Target Start/End: Original strand, 53387054 - 53387110
Alignment:
Q  133 aattggtgttcaggttgtaaaataatcataggaaaagtttcctat-aaatttggggt 188  Q
    ||||| ||||||||| ||| ||||||||||||  ||||||||||| |||||||||||    
T  53387054 aattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggt 53387110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 58; Significance: 2e-24; HSPs: 18)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 66 - 186
Target Start/End: Original strand, 149598 - 149718
Alignment:
Q  66 agaaattaatgttagaatttaaaattgaattgttgaaagtgcaggtaatccaatgaattaaggtaataattggtgttcaggttgtaaaataatcatagga 165  Q
    ||||||||  ||| ||| |||||||||| |||||||||| | ||||||||| |||||||||||||||||||||||||||| ||||  ||||||||||||     
T  149598 agaaattagggtttgaaattaaaattga-ttgttgaaagagtaggtaatccgatgaattaaggtaataattggtgttcagattgttgaataatcataggt 149696  T
Q  166 aaagtttcctat-aaatttggg 186  Q
     ||||||||||| |||||||||    
T  149697 taagtttcctatcaaatttggg 149718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 15 - 180
Target Start/End: Original strand, 28652593 - 28652756
Alignment:
Q  15 taattctaaaaaggggtttaacctt-gtagttgttgttagttt-gaggattagagaaattaatgttagaatttaaaattgaattgttgaaagtgcaggta 112  Q
    ||||||| |||| ||||||| |||| ||||||||||||||||| || | ||| ||||||||  |||||| |    |||| ||||||| |||| | |||||    
T  28652593 taattctgaaaaagggtttagcctttgtagttgttgttagttttgatg-ttatagaaattagggttagattg---aatttaattgttaaaagagtaggta 28652688  T
Q  113 atccaatgaattaaggtaataattggtgttcaggttgtaaaataatcataggaaaagtttcctataaa 180  Q
    ||||||||||||||||||||||||| ||||||||| ||| |||||||||||||| ||||| |||||||    
T  28652689 atccaatgaattaaggtaataattgatgttcaggtagtagaataatcataggaagagttttctataaa 28652756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 94 - 186
Target Start/End: Original strand, 1383771 - 1383864
Alignment:
Q  94 attgttgaaagtgcaggtaatccaatgaattaaggtaataattggtgttcaggttgtaaaataatcataggaaaagtttcctat-aaatttggg 186  Q
    ||||||||||| | ||||||||| ||||||||| |||||||||||| ||||||||||| ||||||||||||  ||||||||||| |||||||||    
T  1383771 attgttgaaagagtaggtaatccgatgaattaacgtaataattggtcttcaggttgtagaataatcataggttaagtttcctatcaaatttggg 1383864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 84 - 164
Target Start/End: Complemental strand, 23801435 - 23801356
Alignment:
Q  84 ttaaaattgaattgttgaaagtgcaggtaatccaatgaattaaggtaataattggtgttcaggttgtaaaataatcatagg 164  Q
    |||||||||| |||||||||| | |||||| || ||||||||||||||||| |||||||||||||||| |||||| |||||    
T  23801435 ttaaaattga-ttgttgaaagagtaggtaacccgatgaattaaggtaataactggtgttcaggttgtagaataataatagg 23801356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 94 - 186
Target Start/End: Complemental strand, 19647167 - 19647074
Alignment:
Q  94 attgttgaaagtgcaggtaatccaatgaattaaggtaataattggtgttcaggttgtaaaataatcataggaaaagtttcctat-aaatttggg 186  Q
    |||||||||| || |||||||||||||||||||  ||| ||||| ||||||||||||| |||||  ||||| || ||||||||| |||||||||    
T  19647167 attgttgaaaatgtaggtaatccaatgaattaacataagaattgatgttcaggttgtagaataacaataggtaatgtttcctatcaaatttggg 19647074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 94 - 175
Target Start/End: Complemental strand, 45535859 - 45535778
Alignment:
Q  94 attgttgaaagtgcaggtaatccaatgaattaaggtaataattggtgttcaggttgtaaaataatcataggaaaagtttcct 175  Q
    ||||||||||||| |||||||||||||||||||  ||| ||||| ||||||||||||| |||||  ||||| || |||||||    
T  45535859 attgttgaaagtgtaggtaatccaatgaattaacataaaaattgatgttcaggttgtagaataacaataggtaatgtttcct 45535778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 94 - 186
Target Start/End: Original strand, 18388356 - 18388448
Alignment:
Q  94 attgttgaaagtgcaggtaatccaatgaattaaggtaataattggtgttcaggttgtaaaataatcataggaaaagtttcctataaatttggg 186  Q
    ||||||||| ||| |||||||||||||||||||  ||| ||||| ||||||||||||| | |||| ||| |  | ||||||||| ||||||||    
T  18388356 attgttgaaggtgtaggtaatccaatgaattaatataaaaattgatgttcaggttgtagagtaataataagtgaggtttcctatcaatttggg 18388448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 97 - 157
Target Start/End: Complemental strand, 45535726 - 45535666
Alignment:
Q  97 gttgaaagtgcaggtaatccaatgaattaaggtaataattggtgttcaggttgtaaaataa 157  Q
    |||||||||| |||||||||||||||||||  ||| ||||| ||||||||||||| |||||    
T  45535726 gttgaaagtgtaggtaatccaatgaattaacataaaaattgatgttcaggttgtagaataa 45535666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 101 - 186
Target Start/End: Original strand, 28345162 - 28345248
Alignment:
Q  101 aaagtgcaggtaatccaatgaattaaggtaataattggtgttcaggttgtaaaataatcataggaaaagtttcctat-aaatttggg 186  Q
    |||||| |||||||||||||||| | ||| | ||||| | || |||||||| ||||||||||||  ||||||||||| |||||||||    
T  28345162 aaagtgtaggtaatccaatgaatcatggtgaaaattgttattgaggttgtagaataatcataggttaagtttcctatcaaatttggg 28345248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 185
Target Start/End: Original strand, 14183620 - 14183677
Alignment:
Q  129 taataattggtgttcaggttgtaaaataatcataggaaaagtttcctat-aaatttgg 185  Q
    ||||||||||||||||||||||  |||||||||||| | |||||||||| ||||||||    
T  14183620 taataattggtgttcaggttgtggaataatcataggtagagtttcctatcaaatttgg 14183677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 111 - 186
Target Start/End: Original strand, 36734588 - 36734664
Alignment:
Q  111 taatccaatgaattaaggtaataattggtgttcaggttgtaaaataatcataggaaaagtttcctat-aaatttggg 186  Q
    |||| ||||||||||  |||  ||||||||||||||||||| ||||||| ||||  ||||||||||| |||||||||    
T  36734588 taattcaatgaattagtgtacaaattggtgttcaggttgtagaataatcttaggttaagtttcctatcaaatttggg 36734664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 94 - 157
Target Start/End: Complemental strand, 24884294 - 24884231
Alignment:
Q  94 attgttgaaagtgcaggtaatccaatgaattaaggtaataattggtgttcaggttgtaaaataa 157  Q
    ||||||||||||| |||||||||||||||||||  ||  ||||| |||||||||| || |||||    
T  24884294 attgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgttcaggttatagaataa 24884231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 56
Target Start/End: Original strand, 21315517 - 21315559
Alignment:
Q  14 ataattctaaaaaggggtttaaccttgtagttgttgttagttt 56  Q
    |||||||| |||| ||||||||||||||||||||| |||||||    
T  21315517 ataattctgaaaaagggtttaaccttgtagttgttattagttt 21315559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 56
Target Start/End: Original strand, 21335307 - 21335349
Alignment:
Q  14 ataattctaaaaaggggtttaaccttgtagttgttgttagttt 56  Q
    |||||||| |||| ||||||||||||||||||||| |||||||    
T  21335307 ataattctgaaaaagggtttaaccttgtagttgttattagttt 21335349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 162
Target Start/End: Original strand, 12626543 - 12626619
Alignment:
Q  85 taaaattgaattgttgaaagtgcaggtaatccaatgaattaaggtaataattggtgttcaggttgtaaaataatcata 162  Q
    ||||||||| |||||||||| | ||||||||| |||||||||   || ||||| ||||||||||||| ||||| ||||    
T  12626543 taaaattga-ttgttgaaagagtaggtaatccgatgaattaacagaagaattgatgttcaggttgtagaataaacata 12626619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 177
Target Start/End: Original strand, 14179882 - 14179930
Alignment:
Q  129 taataattggtgttcaggttgtaaaataatcataggaaaagtttcctat 177  Q
    ||||||||||||||||||||||  |||||||||||| |  |||||||||    
T  14179882 taataattggtgttcaggttgtggaataatcataggtagtgtttcctat 14179930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 133 - 188
Target Start/End: Original strand, 21072845 - 21072901
Alignment:
Q  133 aattggtgttcaggttgtaaaataatcataggaaaagtttcctat-aaatttggggt 188  Q
    ||||| ||||||||||||  ||||||||||||  ||||||||||| |||||||||||    
T  21072845 aattgatgttcaggttgtggaataatcataggttaagtttcctatcaaatttggggt 21072901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 133 - 177
Target Start/End: Original strand, 41301086 - 41301130
Alignment:
Q  133 aattggtgttcaggttgtaaaataatcataggaaaagtttcctat 177  Q
    ||||| ||||||||||||| ||||||||||||  |||||||||||    
T  41301086 aattgatgttcaggttgtagaataatcataggttaagtttcctat 41301130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 54; Significance: 5e-22; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 94 - 186
Target Start/End: Complemental strand, 22055 - 21962
Alignment:
Q  94 attgttgaaagtgcaggtaatccaatgaattaaggtaataattggtgttcaggttgtaaaataatcataggaaaagtttcctat-aaatttggg 186  Q
    ||||||||||| | ||||||||  |||||||||||||| ||||||||||||||||||| ||||||||||||  ||||||||||| |||||||||    
T  22055 attgttgaaagagtaggtaatctgatgaattaaggtaagaattggtgttcaggttgtagaataatcataggttaagtttcctatcaaatttggg 21962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 94 - 140
Target Start/End: Complemental strand, 9958 - 9912
Alignment:
Q  94 attgttgaaagtgcaggtaatccaatgaattaaggtaataattggtg 140  Q
    ||||||||||| | ||||||||  |||||||||||||||||||||||    
T  9958 attgttgaaagagtaggtaatctgatgaattaaggtaataattggtg 9912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 54; Significance: 5e-22; HSPs: 15)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 94 - 186
Target Start/End: Original strand, 36508862 - 36508955
Alignment:
Q  94 attgttgaaagtgcaggtaatccaatgaattaaggtaataattggtgttcaggttgtaaaataatcataggaaaagtttcctat-aaatttggg 186  Q
    ||||||||||| | ||||||||  ||||||||||||||||||||||||| |||||||| ||||||||||||  ||||||||||| |||||||||    
T  36508862 attgttgaaagagtaggtaatctgatgaattaaggtaataattggtgtttaggttgtagaataatcataggttaagtttcctatcaaatttggg 36508955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 14 - 56
Target Start/End: Complemental strand, 16063762 - 16063720
Alignment:
Q  14 ataattctaaaaaggggtttaaccttgtagttgttgttagttt 56  Q
    ||||||||||||| |||||||||||||||||||||||||||||    
T  16063762 ataattctaaaaaagggtttaaccttgtagttgttgttagttt 16063720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 94 - 157
Target Start/End: Complemental strand, 17875990 - 17875927
Alignment:
Q  94 attgttgaaagtgcaggtaatccaatgaattaaggtaataattggtgttcaggttgtaaaataa 157  Q
    ||||||||||||| |||||||||||||||||||  ||  ||||| ||||||||||||| |||||    
T  17875990 attgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgttcaggttgtagaataa 17875927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 94 - 177
Target Start/End: Complemental strand, 21504072 - 21503989
Alignment:
Q  94 attgttgaaagtgcaggtaatccaatgaattaaggtaataattggtgttcaggttgtaaaataatcataggaaaagtttcctat 177  Q
    ||||||||||| | |||| ||||||||||||||  ||| || || ||||||||||||| ||||||||||||   ||||||||||    
T  21504072 attgttgaaagagtaggtgatccaatgaattaacataagaactgatgttcaggttgtagaataatcataggttgagtttcctat 21503989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 133 - 188
Target Start/End: Original strand, 27868731 - 27868787
Alignment:
Q  133 aattggtgttcaggttgtaaaataatcataggaaaagtttcctat-aaatttggggt 188  Q
    ||||| ||||||||||||| ||||||||||||  ||||||||||| |||||||||||    
T  27868731 aattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttggggt 27868787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 14 - 53
Target Start/End: Original strand, 6551331 - 6551370
Alignment:
Q  14 ataattctaaaaaggggtttaaccttgtagttgttgttag 53  Q
    |||||||| |||| ||||||||||||||||||||||||||    
T  6551331 ataattctgaaaaagggtttaaccttgtagttgttgttag 6551370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 94 - 157
Target Start/End: Complemental strand, 31456784 - 31456721
Alignment:
Q  94 attgttgaaagtgcaggtaatccaatgaattaaggtaataattggtgttcaggttgtaaaataa 157  Q
    ||||||||||||| ||||||| |||||||||||  ||  ||||| ||||||||||||| |||||    
T  31456784 attgttgaaagtgtaggtaattcaatgaattaacatatgaattgatgttcaggttgtagaataa 31456721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 56
Target Start/End: Complemental strand, 18744885 - 18744843
Alignment:
Q  14 ataattctaaaaaggggtttaaccttgtagttgttgttagttt 56  Q
    |||||||| |||| ||||||||||||||||||||| |||||||    
T  18744885 ataattctgaaaaagggtttaaccttgtagttgttattagttt 18744843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 133 - 186
Target Start/End: Original strand, 33472720 - 33472774
Alignment:
Q  133 aattggtgttcaggttgtaaaataatcataggaaaagtttcctat-aaatttggg 186  Q
    ||||| ||||||||||||| ||||||||||||  ||||||||||| |||||||||    
T  33472720 aattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttggg 33472774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 82
Target Start/End: Complemental strand, 36315358 - 36315304
Alignment:
Q  29 ggtttaaccttgtagttgttgttag-tttgaggattagagaaattaatgttagaa 82  Q
    ||||||||||| ||||||| ||||| ||||||||||||||||||||  |||||||    
T  36315358 ggtttaaccttatagttgtcgttaggtttgaggattagagaaattagggttagaa 36315304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 108 - 180
Target Start/End: Original strand, 21398931 - 21399003
Alignment:
Q  108 aggtaatccaatgaattaaggtaataattggtgttcaggttgtaaaataatcataggaaaagtttcctataaa 180  Q
    |||||||| ||| |||||  |||  ||||| ||||||||||||| ||||| |||||||| ||||| |||||||    
T  21398931 aggtaatctaattaattagtgtacaaattgatgttcaggttgtagaataaacataggaagagttttctataaa 21399003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 133 - 188
Target Start/End: Original strand, 24594220 - 24594276
Alignment:
Q  133 aattggtgttcaggttgtaaaataatcataggaaaagtttcctat-aaatttggggt 188  Q
    ||||| ||||||||| ||| ||||||||||||  ||||||||||| |||||||||||    
T  24594220 aattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggt 24594276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 133 - 188
Target Start/End: Original strand, 24668314 - 24668370
Alignment:
Q  133 aattggtgttcaggttgtaaaataatcataggaaaagtttcctat-aaatttggggt 188  Q
    ||||| ||||||||| ||| ||||||||||||  ||||||||||| |||||||||||    
T  24668314 aattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggt 24668370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 133 - 188
Target Start/End: Original strand, 24738083 - 24738139
Alignment:
Q  133 aattggtgttcaggttgtaaaataatcataggaaaagtttcctat-aaatttggggt 188  Q
    ||||| ||||||||| ||| ||||||||||||  ||||||||||| |||||||||||    
T  24738083 aattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggt 24738139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 133 - 188
Target Start/End: Original strand, 24750852 - 24750908
Alignment:
Q  133 aattggtgttcaggttgtaaaataatcataggaaaagtttcctat-aaatttggggt 188  Q
    ||||| ||||||||| ||| ||||||||||||  ||||||||||| |||||||||||    
T  24750852 aattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggt 24750908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0594 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0594
Description:

Target: scaffold0594; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 85 - 164
Target Start/End: Complemental strand, 2181 - 2103
Alignment:
Q  85 taaaattgaattgttgaaagtgcaggtaatccaatgaattaaggtaataattggtgttcaggttgtaaaataatcatagg 164  Q
    ||||||||| |||||||||| | ||||||||| ||||| |||||||||||||||||||||||||||| ||||||||||||    
T  2181 taaaattga-ttgttgaaagagtaggtaatccgatgaactaaggtaataattggtgttcaggttgtagaataatcatagg 2103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0676 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0676
Description:

Target: scaffold0676; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 66 - 186
Target Start/End: Complemental strand, 2774 - 2654
Alignment:
Q  66 agaaattaatgttagaatttaaaattgaattgttgaaagtgcaggtaatccaatgaattaaggtaataattggtgttcaggttgtaaaataatcatagga 165  Q
    ||||||||  ||| ||| |||||||||| |||||||||| | ||||||||  |||||||||||||||||||||||||||| ||||  |||||||||| |     
T  2774 agaaattagggtttgaaattaaaattga-ttgttgaaagagtaggtaatctgatgaattaaggtaataattggtgttcagattgttgaataatcatacgt 2676  T
Q  166 aaagtttcctat-aaatttggg 186  Q
     ||||||||||| |||||||||    
T  2675 taagtttcctatcaaatttggg 2654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0676; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 56
Target Start/End: Complemental strand, 2892 - 2850
Alignment:
Q  14 ataattctaaaaaggggtttaaccttgtagttgttgttagttt 56  Q
    |||||||| |||| |||||||||||||||||||||||||||||    
T  2892 ataattctgaaaaagggtttaaccttgtagttgttgttagttt 2850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 94 - 163
Target Start/End: Complemental strand, 21473 - 21404
Alignment:
Q  94 attgttgaaagtgcaggtaatccaatgaattaaggtaataattggtgttcaggttgtaaaataatcatag 163  Q
    ||||||||||| | ||||||||  |||||||||||||||||||||||||||||||||| |||||||||||    
T  21473 attgttgaaagagtaggtaatctgatgaattaaggtaataattggtgttcaggttgtagaataatcatag 21404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 84 - 186
Target Start/End: Complemental strand, 8783 - 8681
Alignment:
Q  84 ttaaaattgaattgttgaaagtgcaggtaatccaatgaattaaggtaataattggtgttcaggttgtaaaataatcataggaaaagtttcctat-aaatt 182  Q
    |||||||||| |||||||||| | ||||||||  |||||||||||||||||||||||||||||||| | | |||||||||| | ||||| |||| |||||    
T  8783 ttaaaattga-ttgttgaaagagtaggtaatcagatgaattaaggtaataattggtgttcaggttgcagagtaatcataggtagagttttctatcaaatt 8685  T
Q  183 tggg 186  Q
    ||||    
T  8684 tggg 8681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 14 - 176
Target Start/End: Complemental strand, 17117 - 16958
Alignment:
Q  14 ataattctaaaaaggggtttaaccttgtagttgttgttagtttgaggattagagaaattaatgttagaatttaaaattgaattgttgaaagtgcaggtaa 113  Q
    |||||||| |||| ||||||||| |||||||||||| ||||||||  |||| ||||||||   |||  ||||  ||||  ||||||||||| | ||||||    
T  17117 ataattcttaaaaagggtttaactttgtagttgttgatagtttgat-attatagaaattaggttta--atttgcaatttgattgttgaaagagtaggtaa 17021  T
Q  114 tccaatgaattaaggtaataattggtgttcaggttgtaaaataatcataggaaaagtttccta 176  Q
    |||||||||||||  ||| ||||| ||||||||||||| |||||  |||| ||| ||||||||    
T  17020 tccaatgaattaatataaaaattgatgttcaggttgtagaataacaatagaaaatgtttccta 16958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 14 - 176
Target Start/End: Complemental strand, 26648 - 26489
Alignment:
Q  14 ataattctaaaaaggggtttaaccttgtagttgttgttagtttgaggattagagaaattaatgttagaatttaaaattgaattgttgaaagtgcaggtaa 113  Q
    |||||||| |||| ||||||||| |||||||||||| ||||||||  |||| ||||||||   |||  ||||  ||||  ||||||||||| | ||||||    
T  26648 ataattcttaaaaagggtttaactttgtagttgttgatagtttgat-attatagaaattaggttta--atttgcaatttgattgttgaaagagtaggtaa 26552  T
Q  114 tccaatgaattaaggtaataattggtgttcaggttgtaaaataatcataggaaaagtttccta 176  Q
    |||||||||||||  ||| ||||| ||||||||||||| |||||  |||| ||| ||||||||    
T  26551 tccaatgaattaatataaaaattgatgttcaggttgtagaataacaatagaaaatgtttccta 26489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 98 - 173
Target Start/End: Original strand, 66202 - 66277
Alignment:
Q  98 ttgaaagtgcaggtaatccaatgaattaaggtaataattggtgttcaggttgtaaaataatcataggaaaagtttc 173  Q
    ||||||| | ||||||||| ||||| |||||||||||||||||||||||||||| |||||||||||| | ||||||    
T  66202 ttgaaagagtaggtaatccgatgaactaaggtaataattggtgttcaggttgtagaataatcataggtagagtttc 66277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 94 - 186
Target Start/End: Original strand, 106280 - 106373
Alignment:
Q  94 attgttgaaagtgcaggtaatccaatgaattaaggtaataattggtgttcaggttgtaaaataatcataggaaaagtttcctat-aaatttggg 186  Q
    ||||||||||| | |||||||   |||||||||||||||||||  ||||||||||||||||||||| ||||  ||||||||||| |||||||||    
T  106280 attgttgaaagagaaggtaatttgatgaattaaggtaataattattgttcaggttgtaaaataatcgtaggttaagtttcctatcaaatttggg 106373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0256 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0256
Description:

Target: scaffold0256; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 118 - 176
Target Start/End: Original strand, 1984 - 2042
Alignment:
Q  118 atgaattaaggtaataattggtgttcaggttgtaaaataatcataggaaaagtttccta 176  Q
    ||||||||||||||||| ||||||||| |||||| ||||||||||||  ||||||||||    
T  1984 atgaattaaggtaataagtggtgttcatgttgtagaataatcataggttaagtttccta 2042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 94 - 175
Target Start/End: Complemental strand, 28647 - 28566
Alignment:
Q  94 attgttgaaagtgcaggtaatccaatgaattaaggtaataattggtgttcaggttgtaaaataatcataggaaaagtttcct 175  Q
    ||||||||||||| |||||||| ||||||||||  ||| ||||| ||||||||||||| |||||| ||| | || |||||||    
T  28647 attgttgaaagtgtaggtaatctaatgaattaacataaaaattgatgttcaggttgtagaataataatacgtaatgtttcct 28566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 38; Significance: 0.000000000002; HSPs: 14)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 94 - 186
Target Start/End: Original strand, 20517175 - 20517268
Alignment:
Q  94 attgttgaaagtgcaggtaatccaatgaattaaggtaataattggtgttcaggttgtaaaataatcataggaaaagtttcctat-aaatttggg 186  Q
    ||||||||||||| |||||||||||||||||||  ||| ||| | ||||||||||||| |||||  |||||  | ||||||||| |||||||||    
T  20517175 attgttgaaagtgtaggtaatccaatgaattaatataaaaatcgatgttcaggttgtagaataacaataggtgatgtttcctatcaaatttggg 20517268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 94 - 175
Target Start/End: Complemental strand, 20879406 - 20879325
Alignment:
Q  94 attgttgaaagtgcaggtaatccaatgaattaaggtaataattggtgttcaggttgtaaaataatcataggaaaagtttcct 175  Q
    |||||| |||||| |||||||||||||||||||  ||| ||||| ||||||||||||| |||||  ||||| || |||||||    
T  20879406 attgttaaaagtgtaggtaatccaatgaattaacataagaattgatgttcaggttgtagaataacaataggtaatgtttcct 20879325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 85 - 164
Target Start/End: Original strand, 12037275 - 12037353
Alignment:
Q  85 taaaattgaattgttgaaagtgcaggtaatccaatgaattaaggtaataattggtgttcaggttgtaaaataatcatagg 164  Q
    ||||||||| |||| ||||| | || |||||| |||||||| | |||||||||||||| |||||||| ||||||||||||    
T  12037275 taaaattga-ttgtagaaagagtagataatccgatgaattaggttaataattggtgtttaggttgtagaataatcatagg 12037353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 94 - 157
Target Start/End: Complemental strand, 22345056 - 22344993
Alignment:
Q  94 attgttgaaagtgcaggtaatccaatgaattaaggtaataattggtgttcaggttgtaaaataa 157  Q
    ||||||||||||| |||||||||||||||||||  ||| ||| | ||||||||||||| |||||    
T  22345056 attgttgaaagtgtaggtaatccaatgaattaatataaaaatcgatgttcaggttgtagaataa 22344993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 94 - 157
Target Start/End: Complemental strand, 22356716 - 22356653
Alignment:
Q  94 attgttgaaagtgcaggtaatccaatgaattaaggtaataattggtgttcaggttgtaaaataa 157  Q
    ||||||||||||| |||||||||||||||||||  ||| ||| | ||||||||||||| |||||    
T  22356716 attgttgaaagtgtaggtaatccaatgaattaatataaaaatcgatgttcaggttgtagaataa 22356653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 56
Target Start/End: Original strand, 4380658 - 4380700
Alignment:
Q  14 ataattctaaaaaggggtttaaccttgtagttgttgttagttt 56  Q
    |||||||| |||| |||||||||||||||||||||||||||||    
T  4380658 ataattctgaaaaagggtttaaccttgtagttgttgttagttt 4380700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 56
Target Start/End: Original strand, 18816336 - 18816378
Alignment:
Q  14 ataattctaaaaaggggtttaaccttgtagttgttgttagttt 56  Q
    |||||||| |||| |||||||||||||||||||||||||||||    
T  18816336 ataattctgaaaaagggtttaaccttgtagttgttgttagttt 18816378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 56
Target Start/End: Complemental strand, 21514702 - 21514660
Alignment:
Q  14 ataattctaaaaaggggtttaaccttgtagttgttgttagttt 56  Q
    |||||||| |||| |||||||||||||||||||||||||||||    
T  21514702 ataattcttaaaaagggtttaaccttgtagttgttgttagttt 21514660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 133 - 188
Target Start/End: Original strand, 8413905 - 8413961
Alignment:
Q  133 aattggtgttcaggttgtaaaataatcataggaaaagtttcctat-aaatttggggt 188  Q
    ||||| ||||||||||||| ||||||||||||  ||||||||||| |||||||||||    
T  8413905 aattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttggggt 8413961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 133 - 188
Target Start/End: Complemental strand, 19882843 - 19882787
Alignment:
Q  133 aattggtgttcaggttgtaaaataatcataggaaaagtttcctat-aaatttggggt 188  Q
    ||||| ||||||||||||| ||||||||||||  ||||||||||| |||||||||||    
T  19882843 aattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttggggt 19882787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 157
Target Start/End: Original strand, 21676713 - 21676773
Alignment:
Q  97 gttgaaagtgcaggtaatccaatgaattaaggtaataattggtgttcaggttgtaaaataa 157  Q
    |||||||| | |||||||||||||||||||  ||| ||||| ||||||||||||| |||||    
T  21676713 gttgaaagagtaggtaatccaatgaattaatataaaaattgatgttcaggttgtagaataa 21676773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 186
Target Start/End: Original strand, 42265675 - 42265767
Alignment:
Q  94 attgttgaaagtgcaggtaatccaatgaattaaggtaataattggtgttcaggttgtaaaataatcataggaaaagtttcctataaatttggg 186  Q
    ||||||||| ||| | |||||||||||||||||  ||| ||||| ||||||||||||| | |||| ||| |  | ||||||||| ||||||||    
T  42265675 attgttgaaggtgtatgtaatccaatgaattaatataaaaattgatgttcaggttgtagagtaataataagtgaggtttcctatcaatttggg 42265767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 94 - 177
Target Start/End: Complemental strand, 22483713 - 22483630
Alignment:
Q  94 attgttgaaagtgcaggtaatccaatgaattaaggtaataattggtgttcaggttgtaaaataatcataggaaaagtttcctat 177  Q
    ||||||||||| | ||||||||  |||||||||  ||| ||||| ||||||||||||| ||||| ||||||   ||||||||||    
T  22483713 attgttgaaagagtaggtaatctgatgaattaacataagaattgatgttcaggttgtagaataaacataggttgagtttcctat 22483630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 56
Target Start/End: Original strand, 36732453 - 36732495
Alignment:
Q  14 ataattctaaaaaggggtttaaccttgtagttgttgttagttt 56  Q
    |||||||| |||| | |||||||||||||||||||||||||||    
T  36732453 ataattctgaaaaagagtttaaccttgtagttgttgttagttt 36732495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0730 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0730
Description:

Target: scaffold0730; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 186
Target Start/End: Original strand, 6614 - 6716
Alignment:
Q  84 ttaaaattgaattgttgaaagtgcaggtaatccaatgaattaaggtaataattggtgttcaggttgtaaaataatcataggaaaagtttcctat-aaatt 182  Q
    |||||||||| |||||||||| | |||||||   ||||||||||||||||||| ||||||| |||||| | |||||||| | | ||||| |||| |||||    
T  6614 ttaaaattga-ttgttgaaagagtaggtaattagatgaattaaggtaataattcgtgttcatgttgtagagtaatcataagtagagttttctatcaaatt 6712  T
Q  183 tggg 186  Q
    ||||    
T  6713 tggg 6716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 108 - 186
Target Start/End: Complemental strand, 12160 - 12081
Alignment:
Q  108 aggtaatccaatgaattaaggtaataattggtgttcaggttgtaaaataatcataggaaaagtttcctat-aaatttggg 186  Q
    |||||| ||||||||||||  ||| ||||| ||||||||||||| ||||||||||||  | ||||||||| |||||||||    
T  12160 aggtaacccaatgaattaacataagaattgatgttcaggttgtagaataatcataggtgatgtttcctatcaaatttggg 12081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 17 - 56
Target Start/End: Original strand, 15659 - 15698
Alignment:
Q  17 attctaaaaaggggtttaaccttgtagttgttgttagttt 56  Q
    |||||||||| |||||||||||||||||||||||||||||    
T  15659 attctaaaaaagggtttaaccttgtagttgttgttagttt 15698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1256 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold1256
Description:

Target: scaffold1256; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 56
Target Start/End: Original strand, 2241 - 2283
Alignment:
Q  14 ataattctaaaaaggggtttaaccttgtagttgttgttagttt 56  Q
    |||||||| |||| |||||||||||||||||||||||||||||    
T  2241 ataattctgaaaaagggtttaaccttgtagttgttgttagttt 2283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1186 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold1186
Description:

Target: scaffold1186; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 56
Target Start/End: Complemental strand, 2031 - 1989
Alignment:
Q  14 ataattctaaaaaggggtttaaccttgtagttgttgttagttt 56  Q
    |||||||| |||| |||||||||||||||||||||||||||||    
T  2031 ataattctgaaaaagggtttaaccttgtagttgttgttagttt 1989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 56
Target Start/End: Original strand, 17562 - 17604
Alignment:
Q  14 ataattctaaaaaggggtttaaccttgtagttgttgttagttt 56  Q
    |||||||| |||| |||||||||||||||||||||||||||||    
T  17562 ataattctgaaaaagggtttaaccttgtagttgttgttagttt 17604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 82
Target Start/End: Original strand, 385 - 439
Alignment:
Q  29 ggtttaaccttgtagttgttgttag-tttgaggattagagaaattaatgttagaa 82  Q
    ||||||||||||||||||| ||||| ||||||||||||||||||||  |||||||    
T  385 ggtttaaccttgtagttgtcgttaggtttgaggattagagaaattagggttagaa 439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 56
Target Start/End: Original strand, 186237 - 186279
Alignment:
Q  14 ataattctaaaaaggggtttaaccttgtagttgttgttagttt 56  Q
    |||||||| |||| |||||||||||||||||||||||||||||    
T  186237 ataattctgaaaaagggtttaaccttgtagttgttgttagttt 186279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 14 - 180
Target Start/End: Complemental strand, 28563 - 28399
Alignment:
Q  14 ataattctaaaaaggggtttaacctt-gtagttgttgttagtttgaggattagagaaattaatgttagaatttaaaattgaattgttgaaagtgcaggta 112  Q
    |||||||| |||| |||||||||||| |||||||||||||||||     ||| ||| ||||  |||||| |    |||| ||||||| |||| | |||||    
T  28563 ataattctgaaaaagggtttaacctttgtagttgttgttagtttttatgttatagagattagggttagattg---aatttaattgttaaaagagtaggta 28467  T
Q  113 atccaatgaattaaggtaataattggtgttcaggttgtaaaataatcataggaaaagtttcctataaa 180  Q
    ||||||| |||||  |||  ||||| || |||||||||| ||||| |||||||| ||||| |||||||    
T  28466 atccaattaattagtgtacaaattgatggtcaggttgtagaataaacataggaagagttttctataaa 28399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 150
Target Start/End: Original strand, 38561 - 38617
Alignment:
Q  94 attgttgaaagtgcaggtaatccaatgaattaaggtaataattggtgttcaggttgt 150  Q
    ||||||||||||| |||||||||||||||||||  | | ||||| ||||||||||||    
T  38561 attgttgaaagtgtaggtaatccaatgaattaacatgaaaattgatgttcaggttgt 38617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 73
Target Start/End: Original strand, 14627 - 14687
Alignment:
Q  14 ataattctaaaaaggggtttaaccttgtagttgttgttag-tttgaggattagagaaatta 73  Q
    |||||||| |||| ||||||||  |||||||||||||||| ||||| ||||||||||||||    
T  14627 ataattctgaaaaagggtttaaatttgtagttgttgttagttttgatgattagagaaatta 14687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 73
Target Start/End: Original strand, 23685 - 23745
Alignment:
Q  14 ataattctaaaaaggggtttaaccttgtagttgttgttag-tttgaggattagagaaatta 73  Q
    |||||||| |||| ||||||||  |||||||||||||||| ||||| ||||||||||||||    
T  23685 ataattctgaaaaagggtttaaatttgtagttgttgttagttttgatgattagagaaatta 23745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0878 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0878
Description:

Target: scaffold0878; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 17 - 56
Target Start/End: Original strand, 3466 - 3505
Alignment:
Q  17 attctaaaaaggggtttaaccttgtagttgttgttagttt 56  Q
    ||||| |||| |||||||||||||||||||||||||||||    
T  3466 attctgaaaaagggtttaaccttgtagttgttgttagttt 3505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 88 - 186
Target Start/End: Complemental strand, 3144 - 3045
Alignment:
Q  88 aattgaattgttgaaagtgcaggtaatccaatgaattaaggtaataattggtgttcaggttgtaaaataatcataggaaaagtttcctat-aaatttggg 186  Q
    |||| |||||||||||||| ||||||| ||||||||||   ||| ||||| ||||| |||| || |||||| ||||| || ||||| ||| |||||||||    
T  3144 aatttaattgttgaaagtgtaggtaattcaatgaattagtataaaaattgatgttctggttttagaataataataggcaatgtttcttatcaaatttggg 3045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 94 - 157
Target Start/End: Original strand, 6913 - 6976
Alignment:
Q  94 attgttgaaagtgcaggtaatccaatgaattaaggtaataattggtgttcaggttgtaaaataa 157  Q
    ||||||||||||| | ||||| |||||||||||  ||| ||||| ||||||||||||| |||||    
T  6913 attgttgaaagtgtatgtaattcaatgaattaacataagaattgatgttcaggttgtagaataa 6976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 32; Significance: 0.000000007; HSPs: 2)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 102 - 177
Target Start/End: Complemental strand, 19040 - 18965
Alignment:
Q  102 aagtgcaggtaatccaatgaattaaggtaataattggtgttcaggttgtaaaataatcataggaaaagtttcctat 177  Q
    ||||| |||||||||||||||| | ||| | ||||| | ||||||||||| |||||||||| |  |||||||||||    
T  19040 aagtgtaggtaatccaatgaatcatggtgaaaattgttattcaggttgtagaataatcatatgttaagtttcctat 18965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 56
Target Start/End: Complemental strand, 19218 - 19176
Alignment:
Q  14 ataattctaaaaaggggtttaaccttgtagttgttgttagttt 56  Q
    |||||||| |||| ||||||||||||||||||||| |||||||    
T  19218 ataattctgaaaaagggtttaaccttgtagttgttattagttt 19176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 56
Target Start/End: Original strand, 5346 - 5388
Alignment:
Q  14 ataattctaaaaaggggtttaaccttgtagttgttgttagttt 56  Q
    |||||||| |||| |||||||||||||||||||||||| ||||    
T  5346 ataattcttaaaaagggtttaaccttgtagttgttgttcgttt 5388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0364 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0364
Description:

Target: scaffold0364; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 133 - 186
Target Start/End: Complemental strand, 8059 - 8005
Alignment:
Q  133 aattggtgttcaggttgtaaaataatcataggaaaagtttcctat-aaatttggg 186  Q
    ||||| ||||||||||||| ||||||||||||  ||||||||||| |||||||||    
T  8059 aattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttggg 8005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 56
Target Start/End: Complemental strand, 1087 - 1045
Alignment:
Q  14 ataattctaaaaaggggtttaaccttgtagttgttgttagttt 56  Q
    |||||||| |||| |||||||||||||||| ||||||||||||    
T  1087 ataattctgaaaaagggtttaaccttgtagatgttgttagttt 1045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 56
Target Start/End: Original strand, 17981 - 18023
Alignment:
Q  14 ataattctaaaaaggggtttaaccttgtagttgttgttagttt 56  Q
    |||||||| |||| || ||||||||||||||||||||||||||    
T  17981 ataattctgaaaaaggatttaaccttgtagttgttgttagttt 18023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 95 - 177
Target Start/End: Complemental strand, 35424 - 35342
Alignment:
Q  95 ttgttgaaagtgcaggtaatccaatgaattaaggtaataattggtgttcaggttgtaaaataatcataggaaaagtttcctat 177  Q
    ||||| |||||| | |||||||||| ||||||  ||| ||||| ||||||||||||| ||||| ||||||   ||||||||||    
T  35424 ttgttaaaagtgtatgtaatccaataaattaacataagaattgatgttcaggttgtagaataaacataggttgagtttcctat 35342  T

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Target: scaffold0056 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 56
Target Start/End: Complemental strand, 18286 - 18244
Alignment:
Q  14 ataattctaaaaaggggtttaaccttgtagttgttgttagttt 56  Q
    |||||||| |||| |||||||||||||||||||||||| ||||    
T  18286 ataattctgaaaaagggtttaaccttgtagttgttgttggttt 18244  T

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Target: scaffold0180 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 94 - 151
Target Start/End: Original strand, 28495 - 28552
Alignment:
Q  94 attgttgaaagtgcaggtaatccaatgaattaaggtaataattggtgttcaggttgta 151  Q
    ||||||||| ||| |||||||||||||||||||  ||| ||||| || ||||||||||    
T  28495 attgttgaaggtgtaggtaatccaatgaattaatataaaaattgatggtcaggttgta 28552  T

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Target: scaffold0017 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 94 - 175
Target Start/End: Complemental strand, 23546 - 23465
Alignment:
Q  94 attgttgaaagtgcaggtaatccaatgaattaaggtaataattggtgttcaggttgtaaaataatcataggaaaagtttcct 175  Q
    |||||| |||||| |||||||| ||||||||||  | | ||||| | ||||||||||| |||||| ||||| || |||||||    
T  23546 attgttaaaagtgtaggtaatcaaatgaattaacatgaaaattgattttcaggttgtagaataataataggtaatgtttcct 23465  T

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Target: scaffold0001 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 188
Target Start/End: Complemental strand, 169328 - 169279
Alignment:
Q  140 gttcaggttgtaaaataatcataggaaaagtttcctat-aaatttggggt 188  Q
    |||||||||||| ||||||||||||  ||||||||||| |||||||||||    
T  169328 gttcaggttgtagaataatcataggttaagtttcctatcaaatttggggt 169279  T

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Target: scaffold0001; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 188
Target Start/End: Complemental strand, 176681 - 176632
Alignment:
Q  140 gttcaggttgtaaaataatcataggaaaagtttcctat-aaatttggggt 188  Q
    |||||||||||| ||||||||||||  ||||||||||| |||||||||||    
T  176681 gttcaggttgtagaataatcataggttaagtttcctatcaaatttggggt 176632  T

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Target: scaffold1800 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold1800
Description:

Target: scaffold1800; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 186
Target Start/End: Complemental strand, 541 - 446
Alignment:
Q  94 attgttgaaagtgcaggtaatccaatgaattaaggtaat--aattggtgttcaggttgtaaaataatcataggaaaagtttcctat-aaatttggg 186  Q
    ||||||||||||| ||||||| |||||||||||  ||||  ||||| ||||| ||||||| |||||  ||||| || |||| |||| |||||||||    
T  541 attgttgaaagtgtaggtaattcaatgaattaatataatacaattgatgttcgggttgtagaataacaataggtaatgttttctatcaaatttggg 446  T

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Target: scaffold0308 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0308
Description:

Target: scaffold0308; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 186
Target Start/End: Complemental strand, 13326 - 13234
Alignment:
Q  94 attgttgaaagtgcaggtaatccaatgaattaaggtaataattggtgttcaggttgtaaaataatcataggaaaagtttcctataaatttggg 186  Q
    |||||||||  || |||||| |||||||||| |  ||| ||||| ||||||||||||||| |||| ||| |  | ||||||||| ||||||||    
T  13326 attgttgaagatgtaggtaacccaatgaattgatataaaaattgatgttcaggttgtaaagtaataataagtgaggtttcctatcaatttggg 13234  T

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Target: scaffold0220 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 56
Target Start/End: Complemental strand, 13958 - 13918
Alignment:
Q  16 aattctaaaaaggggtttaaccttgtagttgttgttagttt 56  Q
    |||||| |||| ||||||||||||| |||||||||||||||    
T  13958 aattctgaaaaagggtttaaccttgaagttgttgttagttt 13918  T

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Target: scaffold0151 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 133 - 177
Target Start/End: Complemental strand, 9990 - 9946
Alignment:
Q  133 aattggtgttcaggttgtaaaataatcataggaaaagtttcctat 177  Q
    ||||| ||||||||||||| ||||||||||||  |||||||||||    
T  9990 aattgatgttcaggttgtagaataatcataggttaagtttcctat 9946  T

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Target: scaffold0116 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 186
Target Start/End: Original strand, 35630 - 35722
Alignment:
Q  94 attgttgaaagtgcaggtaatccaatgaattaaggtaataattggtgttcaggttgtaaaataatcataggaaaagtttcctataaatttggg 186  Q
    ||||||||| ||| || ||||||||||||||||  ||| ||||| |||| |||||||| | |||| ||| |  | ||||||||| ||||||||    
T  35630 attgttgaaggtgtagataatccaatgaattaatataaaaattgatgttgaggttgtagagtaataataagtgaggtttcctatcaatttggg 35722  T

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Target: scaffold0058 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 133 - 177
Target Start/End: Original strand, 39969 - 40013
Alignment:
Q  133 aattggtgttcaggttgtaaaataatcataggaaaagtttcctat 177  Q
    ||||| ||||||||||||| ||||||||||||  |||||||||||    
T  39969 aattgatgttcaggttgtagaataatcataggttaagtttcctat 40013  T

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