View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13138_high_28 (Length: 289)
Name: NF13138_high_28
Description: NF13138
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13138_high_28 |
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Alignment Details
Target: chr7 (Bit Score: 273; Significance: 1e-152; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 1 - 273
Target Start/End: Original strand, 9872318 - 9872590
Alignment:
| Q |
1 |
gaagtgtgattagtttggtttttatggattgggattggaaagagtttgcttgggatccatctggatttgatgaggagttgaagaatgaaggagattcaat |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
9872318 |
gaagtgtgattagtttggtttttatggattgggattggaaagagtttgcttgggatccatctggatttgatgaggagttgaagaatgaaggagattcaat |
9872417 |
T |
|
| Q |
101 |
ggatttgaggcttggtgatcaagcttctgattcattggaaaaatcagttcatgattcaggaaaggaagattcaaaagctgtgtcatcgtcgttgtcgcct |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
9872418 |
ggatttgaggcttggtgatcaagcttctgattcattggaaaaatcagttcatgattcaggaaaggaagattcaaaagctgtgtcatcgtcgttgtcgcct |
9872517 |
T |
|
| Q |
201 |
agtggatcgttgaaaagatcgcgtttacaaaatggatcgcagagtatgatttgctcggttgatggatgtaact |
273 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
9872518 |
agtggatcgttgaaaagatcgcgtttacaaaatggatcgcagagtatgatttgctcggttgatggatgtaact |
9872590 |
T |
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