View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13138_low_39 (Length: 238)
Name: NF13138_low_39
Description: NF13138
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13138_low_39 |
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Alignment Details
Target: chr7 (Bit Score: 206; Significance: 1e-113; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 17 - 222
Target Start/End: Original strand, 44028349 - 44028554
Alignment:
| Q |
17 |
atcatgagccttcatgtgaggaatcaattagttcctatgttgaaggatgctggtgctatatggatttgagacagagccatgaactaatatatattatata |
116 |
Q |
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| T |
44028349 |
atcatgagccttcatgtgaggaatcaattagttcctatgttgaaggatgctggtgctatatggatttgagacagagccatgaactaatatatattatata |
44028448 |
T |
|
| Q |
117 |
gttacattaatatttcagagatcatgaataagatgacttcatatatagtcattgctctgttagttaattgacataattttgtagtcgtcatgtttagctt |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44028449 |
gttacattaatatttcagagatcatgaataagatgacttcatatatagtcattgctctgttagttaattgacataattttgtagtcgtcatgtttagctt |
44028548 |
T |
|
| Q |
217 |
agttat |
222 |
Q |
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|||||| |
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| T |
44028549 |
agttat |
44028554 |
T |
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