View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF13139_high_23 (Length: 440)
Name: NF13139_high_23
Description: NF13139
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13139_high_23 |
 | |
|
| [»] chr4 (4 HSPs) |
| |
|
| [»] scaffold0238 (2 HSPs) |
| | |
|
Alignment Details
Target: chr7 (Bit Score: 217; Significance: 1e-119; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 1 - 264
Target Start/End: Original strand, 10645922 - 10646183
Alignment:
| Q |
1 |
gatgaaaaacctgattagtgaaggcttattgagtagtgtgctgcatagttaacagagatatgtgcatatgcaatgggaggaagtgtacaacttaagatta |
100 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||||||||||||| |||||||| |
|
|
| T |
10645922 |
gatgaaaaacctaattagtgaaggcttattgagtagtgtgctgcatagttaacagagatatgtgcat--gcaatgtggggaagtgtacaacgtaagatta |
10646019 |
T |
|
| Q |
101 |
tgattgggttatctagtaacatgaaaggtcttcagatcaaaggctgagatttagggtgtggttggcagatgagattagcattaattacggatttgggagg |
200 |
Q |
| |
|
|||||||||||||||| |||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10646020 |
tgattgggttatctaggaacatgaatggtcatcagatcaaaggctgagatttagggtgtggttggcagatgagattagcattaattacggatttgggagg |
10646119 |
T |
|
| Q |
201 |
gaaaataagaagtgattagggcaacacggccagctcatcaagtctggcttttataataaaggat |
264 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||| |
|
|
| T |
10646120 |
gaaaataagaagtgattagggcaacactgccagctcatcaagtctggcttttagaataaaggat |
10646183 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 263 - 440
Target Start/End: Original strand, 10645745 - 10645921
Alignment:
| Q |
263 |
atatacatgccttcgatttagtaagaaaagggtattggaaatggagatttatgccttcgattcaaggaaatgaaataggcagagggatagaaaactatgg |
362 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
10645745 |
atatacatgccttcgatttagtaagaaaagggtat-ggaaatggagatttatgccttcgattcaaggaaatgaaatatgcagagggatagaaaactatgg |
10645843 |
T |
|
| Q |
363 |
agaagatggatagaaaacgtagctgcattcaagaaaatgaaaataggctggtgagagtattaattagtctcttgagga |
440 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
10645844 |
agaagatggatagaaaacgtagctgcattcaagaaaatgaaaataggctggtgtgagtattaattagtctcttgagga |
10645921 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 217; Significance: 1e-119; HSPs: 3)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 1 - 264
Target Start/End: Original strand, 43469416 - 43469680
Alignment:
| Q |
1 |
gatgaaaaacctgattagtgaaggcttatt-gagtagtgtgctgcatagttaacagagatatgtgcatatgcaatgggaggaagtgtacaacttaagatt |
99 |
Q |
| |
|
|||||||||||||||||||||| || |||| ||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||| |
|
|
| T |
43469416 |
gatgaaaaacctgattagtgaaagcctatttgagtagtgtgctgcatagttaacagagatatgtgcatatgcaatgtggggaagtgtacaacttaagatt |
43469515 |
T |
|
| Q |
100 |
atgattgggttatctagtaacatgaaaggtcttcagatcaaaggctgagatttagggtgtggttggcagatgagattagcattaattacggatttgggag |
199 |
Q |
| |
|
|||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| |
|
|
| T |
43469516 |
atgattgggttatctacgaacatgaaaggtcttccgatcaaaggctgagatttagggtgtggttggcagatgaaattaacattaattacggatttgggag |
43469615 |
T |
|
| Q |
200 |
ggaaaataagaagtgattagggcaacacggccagctcatcaagtctggcttttataataaaggat |
264 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
43469616 |
ggaaaataagaagtgattagggcaacactgccagctcatcaagtctggcttttataataaaggat |
43469680 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 263 - 440
Target Start/End: Original strand, 43469239 - 43469415
Alignment:
| Q |
263 |
atatacatgccttcgatttagtaagaaaagggtattggaaatggagatttatgccttcgattcaaggaaatgaaataggcagagggatagaaaactatgg |
362 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||| |
|
|
| T |
43469239 |
atatacatgccttcgatttagtaagaaaagggtattggaaatggagatttatgccttcgattcaaggaaatgaaatatgcagaggga-agaaaactatgg |
43469337 |
T |
|
| Q |
363 |
agaagatggatagaaaacgtagctgcattcaagaaaatgaaaataggctggtgagagtattaattagtctcttgagga |
440 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||||||| |
|
|
| T |
43469338 |
agaagatggatagaaaacgtagcggcattcaagaaaatgaaaataggttggtgtgagtattaattagtctcttgagga |
43469415 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 122 - 264
Target Start/End: Complemental strand, 12870297 - 12870155
Alignment:
| Q |
122 |
tgaaaggtcttcagatcaaaggctgagatttagggtgtggttggcagatgagattagcattaattacggatttgggagggaaaataagaagtgattaggg |
221 |
Q |
| |
|
||||| ||| |||||||||||||||||||||||||||||||||| | ||| ||||||||||||||||||| ||||||||||| |||||||||||||| |
|
|
| T |
12870297 |
tgaaaagtcatcagatcaaaggctgagatttagggtgtggttggttgttgaagttagcattaattacggattagggagggaaaaacagaagtgattaggg |
12870198 |
T |
|
| Q |
222 |
caacacggccagctcatcaagtctggcttttataataaaggat |
264 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||| |||||||| |
|
|
| T |
12870197 |
caacactgccagctcatcaagtctggcttttatagtaaaggat |
12870155 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 213; Significance: 1e-116; HSPs: 5)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 213; E-Value: 1e-116
Query Start/End: Original strand, 1 - 264
Target Start/End: Complemental strand, 46566830 - 46566569
Alignment:
| Q |
1 |
gatgaaaaacctgattagtgaaggcttattgagtagtgtgctgcatagttaacagagatatgtgcatatgcaatgggaggaagtgtacaacttaagatta |
100 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||| | |||||||||||||||||||||| |
|
|
| T |
46566830 |
gatgaaaaacctgattagcgaaggcttattgagtagtgtgctgcatagttaacagagatatgtgcat--gcaatgtggggaagtgtacaacttaagatta |
46566733 |
T |
|
| Q |
101 |
tgattgggttatctagtaacatgaaaggtcttcagatcaaaggctgagatttagggtgtggttggcagatgagattagcattaattacggatttgggagg |
200 |
Q |
| |
|
|||||||||||||||| ||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
46566732 |
tgattgggttatctaggaacatgaaaggtcatcagatcaaaggctgagatttaggatgtggttggcagatgagattagcattaattacaaatttgggagg |
46566633 |
T |
|
| Q |
201 |
gaaaataagaagtgattagggcaacacggccagctcatcaagtctggcttttataataaaggat |
264 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||| |
|
|
| T |
46566632 |
gaaaataagaagtgattagggcaacactgccagctcatcaaatctggcttttataataaaggat |
46566569 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 263 - 440
Target Start/End: Complemental strand, 46567008 - 46566831
Alignment:
| Q |
263 |
atatacatgccttcgatttagtaagaaaagggtattggaaatggagatttatgccttcgattcaaggaaatgaaataggcagagggatagaaaa-ctatg |
361 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||| ||||| |
|
|
| T |
46567008 |
atatacatgccttcgatttagtaagaaaagggtat-ggaaatggagatttatgccttcgattcaaggaaatgaaatatgcagagggataaaaaaactatg |
46566910 |
T |
|
| Q |
362 |
gagaagatggatagaaaacgtagctgcattcaagaaaatgaaaataggctggtgagagtattaattagtctcttgagga |
440 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
46566909 |
gagaagatggatagaaaacgtagctgcatttaagaaaatgaaaataggctggtgtgagtattaattagtctcttgagga |
46566831 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 109 - 265
Target Start/End: Original strand, 12606556 - 12606712
Alignment:
| Q |
109 |
ttatctagtaacatgaaaggtcttcagatcaaaggctgagatttagggtgtggttggcagatgagattagcattaattacggatttgggagggaaaataa |
208 |
Q |
| |
|
|||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||| |||||||||||||| |
|
|
| T |
12606556 |
ttatctagaaacatgaaaggtcatcagatcaaaggctgagatttagggtgtggttggcagatgggattagcattaattatggattagggagggaaaataa |
12606655 |
T |
|
| Q |
209 |
gaagtgattagggcaacacggccagctcatcaagtctggcttttataataaaggata |
265 |
Q |
| |
|
| ||||||||||||||||| |||||| |||||||||||||||||||| ||||||||| |
|
|
| T |
12606656 |
ggagtgattagggcaacactgccagcacatcaagtctggcttttatagtaaaggata |
12606712 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 142 - 265
Target Start/End: Original strand, 49195411 - 49195534
Alignment:
| Q |
142 |
ggctgagatttagggtgtggttggcagatgagattagcattaattacggatttgggagggaaaataagaagtgattagggcaacacggccagctcatcaa |
241 |
Q |
| |
|
||||| ||||||| |||||||||||||||||||||| |||||||||| |||| ||||||||||| || ||||||||||||||||| ||||||||||||| |
|
|
| T |
49195411 |
ggctgtgatttagtgtgtggttggcagatgagattaacattaattacagattagggagggaaaaacaggagtgattagggcaacactgccagctcatcaa |
49195510 |
T |
|
| Q |
242 |
gtctggcttttataataaaggata |
265 |
Q |
| |
|
|||||||||||||||||||||||| |
|
|
| T |
49195511 |
gtctggcttttataataaaggata |
49195534 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 101 - 266
Target Start/End: Complemental strand, 40908479 - 40908314
Alignment:
| Q |
101 |
tgattgggttatctagtaacatgaaaggtcttcagatcaaaggctgagatttagggtgtggttggcagatgagattagcattaattacggatttgggagg |
200 |
Q |
| |
|
||||||| ||||||| |||||||||||| | | | ||| |||||||||||| |||||||||||||||||||||| |||||| | | || |||||| |
|
|
| T |
40908479 |
tgattggtttatctaaatacatgaaaggtcatgaaagcaacggctgagatttaacgtgtggttggcagatgagattaacattaaattcatgttagggagg |
40908380 |
T |
|
| Q |
201 |
gaaaataagaagtgattagggcaacacggccagctcatcaagtctggcttttataataaaggatat |
266 |
Q |
| |
|
|||||| || ||||||||||||||| ||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
40908379 |
gaaaatgagggatgattagggcaacactgccagctcatcaagtctggcttttatagtaaaggatat |
40908314 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 154; Significance: 2e-81; HSPs: 4)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 263 - 440
Target Start/End: Original strand, 23537857 - 23538033
Alignment:
| Q |
263 |
atatacatgccttcgatttagtaagaaaagggtattggaaatggagatttatgccttcgattcaaggaaatgaaataggcagagggatagaaaactatgg |
362 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
23537857 |
atatacatgccttcgatttagtaagaaaagggtat-ggaaatggagatttatgcctttgattcaaggaaatgaaatatgcagagggatagaaaactatgg |
23537955 |
T |
|
| Q |
363 |
agaagatggatagaaaacgtagctgcattcaagaaaatgaaaataggctggtgagagtattaattagtctcttgagga |
440 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
23537956 |
agaagatggatagaaaaagtagctgcattcaagaaaatgaaaataggctggtgtgagtattaattagtctcttgagga |
23538033 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 1 - 264
Target Start/End: Original strand, 23538034 - 23538293
Alignment:
| Q |
1 |
gatgaaaaacctgattagtgaaggcttattgagtagtgtgctgcatagttaacagagat-atgtgcatatgcaatgggaggaagtgtacaacttaagatt |
99 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||||| ||||| |||| |||| |||||||| |||||| | |||||||||||| ||||||| |
|
|
| T |
23538034 |
gatgaaaaacctgattagtgaaggcttattgattagtgtgc---atagtaaacatagatgatgtgcat--gcaatgtggggaagtgtacaatgtaagatt |
23538128 |
T |
|
| Q |
100 |
atgattgggttatctagtaacatgaaaggtcttcagatcaaaggctgagatttagggtgtggttggcagatgagattagcattaattacggatttgggag |
199 |
Q |
| |
|
|||||| ||||||||| || |||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| ||||| |
|
|
| T |
23538129 |
ttgattgcgttatctaggaatatgaaaggtcatcagatcaaaggccgagatttagggtgtggttggcagatgagattagcattaattacagattagggag |
23538228 |
T |
|
| Q |
200 |
ggaaaataagaagtgattagggcaacacggccagctcatcaagtctggcttttataataaaggat |
264 |
Q |
| |
|
| ||||||| ||||||||||||||||| || ||||||||||||||| |||| |||||||||||| |
|
|
| T |
23538229 |
gaaaaataatgagtgattagggcaacactgctagctcatcaagtctgactttaataataaaggat |
23538293 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 142 - 264
Target Start/End: Original strand, 31525455 - 31525577
Alignment:
| Q |
142 |
ggctgagatttagggtgtggttggcagatgagattagcattaattacggatttgggagggaaaataagaagtgattagggcaacacggccagctcatcaa |
241 |
Q |
| |
|
||||| ||||||| ||||||||||||| |||||||| |||||||||| |||| ||||||||||| || ||||||||||||||||| ||||||||||||| |
|
|
| T |
31525455 |
ggctgtgatttagtgtgtggttggcagttgagattaacattaattacagattagggagggaaaaacaggagtgattagggcaacactgccagctcatcaa |
31525554 |
T |
|
| Q |
242 |
gtctggcttttataataaaggat |
264 |
Q |
| |
|
||||||||||||||||||||||| |
|
|
| T |
31525555 |
gtctggcttttataataaaggat |
31525577 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 239 - 271
Target Start/End: Original strand, 23142827 - 23142859
Alignment:
| Q |
239 |
caagtctggcttttataataaaggatatacatg |
271 |
Q |
| |
|
||||||| ||||||||||||||||||||||||| |
|
|
| T |
23142827 |
caagtcttgcttttataataaaggatatacatg |
23142859 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 82; Significance: 1e-38; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 142 - 267
Target Start/End: Complemental strand, 33366047 - 33365922
Alignment:
| Q |
142 |
ggctgagatttagggtgtggttggcagatgagattagcattaattacggatttgggagggaaaataagaagtgattagggcaacacggccagctcatcaa |
241 |
Q |
| |
|
||||| ||||||| ||||||||||||| |||||||| ||||||||| |||| ||||||||||| || ||||||||||||||||| ||||||||||||| |
|
|
| T |
33366047 |
ggctgtgatttagtgtgtggttggcagttgagattaacattaattatagattagggagggaaaaacaggagtgattagggcaacactgccagctcatcaa |
33365948 |
T |
|
| Q |
242 |
gtctggcttttataataaaggatata |
267 |
Q |
| |
|
|||||||||||||||||||||||||| |
|
|
| T |
33365947 |
gtctggcttttataataaaggatata |
33365922 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 73; Significance: 3e-33; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 122 - 265
Target Start/End: Complemental strand, 27765454 - 27765317
Alignment:
| Q |
122 |
tgaaaggtcttcagatcaaaggctgagatttagggtgtggttggcagatgagattagcattaattacggatttgggagggaaaataagaagtgattaggg |
221 |
Q |
| |
|
||||||||| ||||||||||| || ||||||| |||||||||||||| |||||||||||||||||| ||||| ||||||||||| | |||||||||||| |
|
|
| T |
27765454 |
tgaaaggtcatcagatcaaagactaagatttatggtgtggttggcagttgagattagcattaattatggattagggagggaaaaacaaaagtgattaggg |
27765355 |
T |
|
| Q |
222 |
caacacggccagctcatcaagtctggcttttataataaaggata |
265 |
Q |
| |
|
|| |||||||||||||||| ||||| ||||||||||||| |
|
|
| T |
27765354 |
ca------ccagctcatcaagtctagctttaataataaaggata |
27765317 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0238 (Bit Score: 66; Significance: 5e-29; HSPs: 2)
Name: scaffold0238
Description:
Target: scaffold0238; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 97 - 182
Target Start/End: Complemental strand, 5408 - 5323
Alignment:
| Q |
97 |
attatgattgggttatctagtaacatgaaaggtcttcagatcaaaggctgagatttagggtgtggttggcagatgagattagcatt |
182 |
Q |
| |
|
||||||||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||| ||||| |
|
|
| T |
5408 |
attatgattggtttatctagaaacatgaaaggtcatcagatcaaaggctgagatttagggtgtggttggcagatgggatttgcatt |
5323 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0238; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 175 - 264
Target Start/End: Complemental strand, 5189 - 5100
Alignment:
| Q |
175 |
ttagcattaattacggatttgggagggaaaataagaagtgattagggcaacacggccagctcatcaagtctggcttttataataaaggat |
264 |
Q |
| |
|
||||||||||||| ||||| ||||| |||||||| |||||||||| |||||| |||||| |||||| ||||||||||||| |||||||| |
|
|
| T |
5189 |
ttagcattaattatggattaaggaggaaaaataaggagtgattaggacaacactgccagcacatcaaatctggcttttatagtaaaggat |
5100 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 64; Significance: 8e-28; HSPs: 3)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 109 - 264
Target Start/End: Complemental strand, 3081358 - 3081203
Alignment:
| Q |
109 |
ttatctagtaacatgaaaggtcttcagatcaaaggctgagatttagggtgtggttggcagatgagattagcattaattacggatttgggagggaaaataa |
208 |
Q |
| |
|
|||||||| |||||||||||| | | | ||| |||||||||||| ||||| |||||||||||||||| |||||| | || || |||||||||||| | |
|
|
| T |
3081358 |
ttatctaggtacatgaaaggtcatgaaagcaacggctgagatttaatgtgtgattggcagatgagattaacattaaatgcgtgttagggagggaaaatga |
3081259 |
T |
|
| Q |
209 |
gaagtgattagggcaacacggccagctcatcaagtctggcttttataataaaggat |
264 |
Q |
| |
|
| ||||||||||||||| ||||||||||||||||||||||| ||| |||||||| |
|
|
| T |
3081258 |
gggatgattagggcaacactgccagctcatcaagtctggctttaatagtaaaggat |
3081203 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 196 - 264
Target Start/End: Original strand, 10983161 - 10983228
Alignment:
| Q |
196 |
ggagggaaaataagaagtgattagggcaacacggccagctcatcaagtctggcttttataataaaggat |
264 |
Q |
| |
|
||||||||||| || | |||||||||||| || |||||||||||||||||||||||||||||||||||| |
|
|
| T |
10983161 |
ggagggaaaatcaggattgattagggcaa-actgccagctcatcaagtctggcttttataataaaggat |
10983228 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 101 - 144
Target Start/End: Complemental strand, 10449276 - 10449233
Alignment:
| Q |
101 |
tgattgggttatctagtaacatgaaaggtcttcagatcaaaggc |
144 |
Q |
| |
|
||||||| |||||||| ||||||||||||| ||||||||||||| |
|
|
| T |
10449276 |
tgattggtttatctaggaacatgaaaggtcatcagatcaaaggc |
10449233 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University