View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13139_low_12 (Length: 532)

Name: NF13139_low_12
Description: NF13139
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13139_low_12
NF13139_low_12
[»] chr6 (35 HSPs)
chr6 (18-120)||(600816-600918)
chr6 (22-120)||(591239-591337)
chr6 (400-488)||(1300780-1300868)
chr6 (407-486)||(5585304-5585384)
chr6 (398-482)||(9721132-9721216)
chr6 (400-486)||(30487302-30487387)
chr6 (405-486)||(10818378-10818459)
chr6 (409-488)||(19278039-19278118)
chr6 (400-482)||(9719027-9719109)
chr6 (404-488)||(14515631-14515715)
chr6 (402-486)||(33236112-33236196)
chr6 (401-477)||(10818226-10818302)
chr6 (406-488)||(34176495-34176576)
chr6 (406-488)||(1390479-1390561)
chr6 (407-477)||(4097684-4097754)
chr6 (402-476)||(14515471-14515545)
chr6 (405-486)||(16737997-16738078)
chr6 (401-471)||(16738173-16738242)
chr6 (402-471)||(665839-665907)
chr6 (407-468)||(2892783-2892844)
chr6 (402-486)||(3841248-3841332)
chr6 (402-486)||(21606852-21606926)
chr6 (402-488)||(4097233-4097319)
chr6 (401-438)||(1390316-1390353)
chr6 (449-486)||(2900072-2900109)
chr6 (404-441)||(15323225-15323262)
chr6 (404-441)||(15353364-15353401)
chr6 (407-476)||(19278210-19278278)
chr6 (412-465)||(23091142-23091195)
chr6 (407-471)||(26318482-26318546)
chr6 (400-428)||(4097510-4097538)
chr6 (401-441)||(9051739-9051779)
chr6 (401-441)||(23090992-23091032)
chr6 (407-471)||(30850089-30850153)
chr6 (407-471)||(33041473-33041537)
[»] chr3 (37 HSPs)
chr3 (404-486)||(24560379-24560461)
chr3 (404-486)||(24253884-24253966)
chr3 (406-488)||(41110323-41110405)
chr3 (402-486)||(34641152-34641236)
chr3 (402-471)||(28581184-28581253)
chr3 (404-488)||(18654600-18654684)
chr3 (404-486)||(36568904-36568985)
chr3 (399-476)||(220569-220646)
chr3 (401-486)||(16275702-16275787)
chr3 (407-487)||(17474209-17474289)
chr3 (406-489)||(23028085-23028168)
chr3 (28-75)||(32036352-32036399)
chr3 (396-486)||(37102151-37102231)
chr3 (398-488)||(41039944-41040034)
chr3 (406-487)||(26135958-26136039)
chr3 (402-476)||(30200263-30200341)
chr3 (404-476)||(28582681-28582753)
chr3 (401-471)||(17474383-17474453)
chr3 (402-476)||(21773780-21773854)
chr3 (402-476)||(24560215-24560289)
chr3 (406-488)||(52474075-52474157)
chr3 (406-486)||(13082856-13082936)
chr3 (396-469)||(16275874-16275947)
chr3 (410-487)||(27541937-27542014)
chr3 (401-476)||(41110493-41110568)
chr3 (401-476)||(25655144-25655219)
chr3 (404-486)||(30200098-30200170)
chr3 (408-471)||(46204890-46204953)
chr3 (401-471)||(6803378-6803448)
chr3 (402-471)||(24253719-24253789)
chr3 (404-486)||(25654971-25655052)
chr3 (399-436)||(220403-220440)
chr3 (408-441)||(10748299-10748332)
chr3 (404-469)||(25499074-25499139)
chr3 (408-477)||(55428550-55428619)
chr3 (400-452)||(18654797-18654849)
chr3 (411-471)||(51819146-51819205)
[»] chr1 (36 HSPs)
chr1 (402-486)||(30010494-30010578)
chr1 (404-486)||(40094933-40095015)
chr1 (406-486)||(12234172-12234252)
chr1 (402-488)||(8529959-8530045)
chr1 (404-486)||(38509894-38509976)
chr1 (404-486)||(41498566-41498649)
chr1 (404-486)||(2858932-2859014)
chr1 (402-471)||(40095111-40095180)
chr1 (407-479)||(20576136-20576208)
chr1 (404-471)||(525277-525344)
chr1 (402-479)||(35349464-35349539)
chr1 (401-471)||(41498401-41498471)
chr1 (402-487)||(47261432-47261517)
chr1 (404-476)||(32951490-32951562)
chr1 (401-476)||(12234007-12234082)
chr1 (401-455)||(20607410-20607464)
chr1 (408-486)||(35512959-35513037)
chr1 (402-486)||(7444657-7444741)
chr1 (404-476)||(30010332-30010404)
chr1 (404-476)||(35349634-35349706)
chr1 (412-471)||(25268441-25268500)
chr1 (404-486)||(2470730-2470812)
chr1 (398-471)||(43551990-43552063)
chr1 (401-470)||(43553109-43553178)
chr1 (404-471)||(35927989-35928056)
chr1 (401-476)||(10391869-10391944)
chr1 (406-468)||(23536782-23536844)
chr1 (403-441)||(26324013-26324051)
chr1 (402-468)||(38510074-38510140)
chr1 (408-486)||(41676443-41676516)
chr1 (402-435)||(1085487-1085520)
chr1 (404-441)||(1085697-1085734)
chr1 (411-476)||(2859104-2859169)
chr1 (407-476)||(7444481-7444550)
chr1 (408-469)||(51597672-51597733)
chr1 (446-478)||(40964769-40964801)
[»] chr4 (47 HSPs)
chr4 (404-486)||(54935231-54935313)
chr4 (402-486)||(45742052-45742136)
chr4 (401-476)||(1968531-1968606)
chr4 (404-488)||(37711283-37711367)
chr4 (402-486)||(41174507-41174591)
chr4 (404-486)||(31348316-31348403)
chr4 (402-486)||(49735466-49735550)
chr4 (404-485)||(54320597-54320678)
chr4 (404-488)||(5730830-5730914)
chr4 (406-486)||(27735907-27735987)
chr4 (406-486)||(54576329-54576409)
chr4 (412-482)||(17938115-17938185)
chr4 (404-486)||(37761626-37761708)
chr4 (399-471)||(54935062-54935135)
chr4 (402-469)||(31348500-31348567)
chr4 (407-470)||(46007879-46007942)
chr4 (401-471)||(2247978-2248048)
chr4 (401-471)||(6938424-6938494)
chr4 (400-441)||(53260714-53260755)
chr4 (408-476)||(27735749-27735817)
chr4 (419-486)||(21694905-21694972)
chr4 (404-471)||(22186719-22186786)
chr4 (404-471)||(26166937-26167004)
chr4 (412-479)||(35248855-35248922)
chr4 (433-488)||(44784151-44784206)
chr4 (401-471)||(37761462-37761532)
chr4 (402-471)||(24565344-24565413)
chr4 (406-471)||(47846233-47846298)
chr4 (402-471)||(56135747-56135816)
chr4 (404-488)||(1968351-1968435)
chr4 (404-480)||(36151743-36151818)
chr4 (401-441)||(37711135-37711175)
chr4 (420-471)||(24565521-24565572)
chr4 (404-471)||(47433886-47433953)
chr4 (404-471)||(54576506-54576573)
chr4 (401-471)||(29798285-29798355)
chr4 (398-440)||(47433712-47433754)
chr4 (401-471)||(54320432-54320501)
chr4 (401-438)||(11089719-11089756)
chr4 (402-471)||(17938285-17938354)
chr4 (400-477)||(21695059-21695136)
chr4 (404-441)||(49735699-49735736)
chr4 (400-452)||(5731027-5731079)
chr4 (402-438)||(5825106-5825142)
chr4 (424-484)||(6891524-6891584)
chr4 (404-476)||(45741890-45741962)
chr4 (404-436)||(56135933-56135965)
[»] chr2 (30 HSPs)
chr2 (401-486)||(23748257-23748342)
chr2 (405-488)||(34209624-34209707)
chr2 (400-486)||(8426875-8426961)
chr2 (404-476)||(36347713-36347785)
chr2 (405-480)||(36046205-36046280)
chr2 (401-488)||(36347538-36347625)
chr2 (402-485)||(35736350-35736433)
chr2 (401-486)||(9631722-9631807)
chr2 (401-482)||(17380007-17380088)
chr2 (406-486)||(40022535-40022615)
chr2 (409-468)||(8427051-8427110)
chr2 (402-485)||(31795767-31795850)
chr2 (401-482)||(2241584-2241665)
chr2 (402-471)||(15224871-15224940)
chr2 (402-458)||(41778771-41778827)
chr2 (398-469)||(35736169-35736240)
chr2 (404-486)||(19566820-19566902)
chr2 (449-486)||(15224739-15224776)
chr2 (404-477)||(22356175-22356248)
chr2 (404-471)||(45257484-45257551)
chr2 (404-486)||(9427148-9427230)
chr2 (401-471)||(31061356-31061426)
chr2 (406-476)||(36046374-36046443)
chr2 (431-485)||(36566877-36566931)
chr2 (453-486)||(1583239-1583272)
chr2 (404-441)||(17379846-17379883)
chr2 (406-471)||(41841684-41841749)
chr2 (402-471)||(42813797-42813866)
chr2 (400-488)||(16713488-16713576)
chr2 (411-471)||(31928226-31928286)
[»] chr7 (38 HSPs)
chr7 (402-486)||(4833529-4833613)
chr7 (400-481)||(47391023-47391104)
chr7 (406-486)||(45940658-45940738)
chr7 (402-486)||(18231748-18231832)
chr7 (401-476)||(39856037-39856112)
chr7 (404-486)||(40196532-40196614)
chr7 (401-476)||(13771118-13771193)
chr7 (405-476)||(31571642-31571713)
chr7 (404-487)||(48881558-48881641)
chr7 (26-120)||(12360689-12360783)
chr7 (404-486)||(41496957-41497039)
chr7 (402-471)||(25887370-25887438)
chr7 (398-483)||(41008348-41008428)
chr7 (404-488)||(13770948-13771032)
chr7 (404-471)||(33519225-33519292)
chr7 (404-471)||(36267553-36267620)
chr7 (407-486)||(42306492-42306571)
chr7 (401-486)||(30592250-30592335)
chr7 (402-471)||(37925839-37925908)
chr7 (398-479)||(43230404-43230485)
chr7 (402-486)||(28074101-28074185)
chr7 (407-486)||(34235010-34235089)
chr7 (446-489)||(30891036-30891079)
chr7 (404-471)||(47390855-47390922)
chr7 (401-486)||(10315795-10315880)
chr7 (401-471)||(48015384-48015454)
chr7 (402-471)||(1051675-1051744)
chr7 (449-486)||(33655153-33655190)
chr7 (406-471)||(37620776-37620841)
chr7 (398-439)||(48881758-48881799)
chr7 (407-471)||(33655285-33655349)
chr7 (401-480)||(13425117-13425196)
chr7 (402-436)||(17853072-17853106)
chr7 (450-488)||(24970211-24970249)
chr7 (402-471)||(33519046-33519115)
chr7 (404-441)||(36267760-36267797)
chr7 (410-486)||(37620936-37621012)
chr7 (406-470)||(23029353-23029417)
[»] chr5 (44 HSPs)
chr5 (406-486)||(1657975-1658055)
chr5 (405-486)||(13634873-13634954)
chr5 (406-486)||(7544298-7544378)
chr5 (404-488)||(10476188-10476272)
chr5 (402-486)||(14245086-14245170)
chr5 (401-488)||(8502832-8502919)
chr5 (404-486)||(14245208-14245290)
chr5 (401-486)||(16938641-16938726)
chr5 (406-486)||(26415055-26415136)
chr5 (409-486)||(36363194-36363271)
chr5 (407-486)||(9798615-9798694)
chr5 (402-469)||(13634709-13634776)
chr5 (407-481)||(11757070-11757144)
chr5 (397-471)||(20147052-20147121)
chr5 (402-476)||(26414891-26414965)
chr5 (401-468)||(10476023-10476090)
chr5 (398-486)||(10650421-10650511)
chr5 (400-486)||(11419188-11419274)
chr5 (404-486)||(33744193-33744275)
chr5 (406-471)||(34980812-34980877)
chr5 (408-467)||(2550533-2550592)
chr5 (404-486)||(28279476-28279558)
chr5 (402-471)||(28279654-28279723)
chr5 (404-441)||(40305670-40305707)
chr5 (398-486)||(10650576-10650664)
chr5 (401-477)||(11436936-11437012)
chr5 (404-476)||(16938479-16938551)
chr5 (404-468)||(37551585-37551649)
chr5 (404-468)||(37654415-37654479)
chr5 (402-441)||(10204574-10204613)
chr5 (409-468)||(36363037-36363096)
chr5 (446-488)||(4373608-4373650)
chr5 (402-476)||(7544134-7544208)
chr5 (398-428)||(10072651-10072681)
chr5 (407-441)||(21581154-21581188)
chr5 (404-486)||(34980972-34981054)
chr5 (404-441)||(5688597-5688634)
chr5 (404-441)||(11437149-11437186)
chr5 (402-439)||(15986833-15986870)
chr5 (449-486)||(36392195-36392232)
chr5 (402-471)||(40815295-40815364)
chr5 (401-441)||(12035933-12035973)
chr5 (403-471)||(20513614-20513682)
chr5 (404-436)||(22023571-22023603)
[»] chr8 (43 HSPs)
chr8 (401-486)||(31543069-31543154)
chr8 (400-488)||(34634303-34634391)
chr8 (404-486)||(43732849-43732931)
chr8 (404-488)||(11785686-11785770)
chr8 (402-486)||(16024316-16024399)
chr8 (404-488)||(31738583-31738667)
chr8 (410-489)||(36309002-36309081)
chr8 (404-478)||(3726863-3726937)
chr8 (408-486)||(30479721-30479799)
chr8 (398-476)||(31543244-31543322)
chr8 (401-486)||(30365292-30365377)
chr8 (408-476)||(7979144-7979212)
chr8 (404-471)||(9718656-9718723)
chr8 (397-488)||(10028283-10028374)
chr8 (402-476)||(1027020-1027094)
chr8 (410-476)||(1281149-1281215)
chr8 (401-471)||(8815318-8815388)
chr8 (412-486)||(11575415-11575488)
chr8 (402-485)||(41103502-41103587)
chr8 (404-469)||(13404976-13405041)
chr8 (404-471)||(12022142-12022210)
chr8 (407-486)||(16653111-16653190)
chr8 (404-471)||(30365130-30365197)
chr8 (404-469)||(11033419-11033482)
chr8 (398-471)||(9434477-9434549)
chr8 (449-488)||(1026894-1026933)
chr8 (404-471)||(2248452-2248519)
chr8 (404-471)||(7503131-7503198)
chr8 (404-486)||(8815141-8815223)
chr8 (401-436)||(9718486-9718521)
chr8 (408-471)||(11575583-11575646)
chr8 (402-477)||(12022314-12022389)
chr8 (402-441)||(43732677-43732716)
chr8 (450-488)||(1281303-1281341)
chr8 (434-488)||(2248612-2248666)
chr8 (402-476)||(10028108-10028182)
chr8 (448-486)||(37923122-37923160)
chr8 (404-441)||(2481980-2482017)
chr8 (400-477)||(13405151-13405228)
chr8 (407-471)||(37923255-37923320)
chr8 (404-441)||(40632996-40633033)
chr8 (403-471)||(7394638-7394706)
chr8 (404-440)||(34196515-34196551)
[»] scaffold0067 (2 HSPs)
scaffold0067 (398-476)||(39362-39440)
scaffold0067 (404-486)||(39186-39269)
[»] scaffold0262 (1 HSPs)
scaffold0262 (402-486)||(16294-16378)
[»] scaffold0198 (1 HSPs)
scaffold0198 (407-486)||(3150-3229)
[»] scaffold0007 (1 HSPs)
scaffold0007 (408-486)||(242378-242456)
[»] scaffold0026 (2 HSPs)
scaffold0026 (407-476)||(1175-1244)
scaffold0026 (449-486)||(1334-1371)
[»] scaffold0171 (1 HSPs)
scaffold0171 (402-486)||(16112-16196)
[»] scaffold0240 (1 HSPs)
scaffold0240 (402-471)||(17717-17784)
[»] scaffold0012 (1 HSPs)
scaffold0012 (408-486)||(184769-184847)
[»] scaffold0096 (1 HSPs)
scaffold0096 (404-471)||(6584-6651)
[»] scaffold0071 (1 HSPs)
scaffold0071 (400-429)||(53092-53121)


Alignment Details
Target: chr6 (Bit Score: 99; Significance: 1e-48; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 18 - 120
Target Start/End: Complemental strand, 600918 - 600816
Alignment:
Q  18 gatttttaatccttgcttcagcttcataagctagagaattcactgtatcttctctttgatgaggtaaaacttcatttagaattttgctaacattgcttgc 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  600918 gatttttaatccttgcttcagcttcataagctagagaattcactgtatcttctctttgatgaggtaagacttcatttagaattttgctaacattgcttgc 600819  T
Q  118 acc 120  Q
    |||    
T  600818 acc 600816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 22 - 120
Target Start/End: Complemental strand, 591337 - 591239
Alignment:
Q  22 tttaatccttgcttcagcttcataagctagagaattcactgtatcttctctttgatgaggtaaaacttcatttagaattttgctaacattgcttgcacc 120  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||    
T  591337 tttaatccttgcttcagcttcataagctagagaattcaccgtatcttctctttgatggggtaaaacttcatttagaattttgctaacattacttgcacc 591239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 400 - 488
Target Start/End: Complemental strand, 1300868 - 1300780
Alignment:
Q  400 attaagggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggacactatgaaatat 488  Q
    |||||||||||||||||||||||||||| ||||  ||| ||| || || ||||||||||||||||||||||| ||||| ||||||||||    
T  1300868 attaagggtgtgtttggatggagggtttggaagatgaatggaggggagggtttacttttcatttttaaattacggacaatatgaaatat 1300780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 407 - 486
Target Start/End: Original strand, 5585304 - 5585384
Alignment:
Q  407 gtgtgtttggatggagggtttagaaggggaagggatggaagagtttac-ttttcatttttaaattaaggacactatgaaat 486  Q
    ||||||||||||||||||||||| ||||||||| |||||||||||||| ||||| ||||||||||| | ||||||||||||    
T  5585304 gtgtgtttggatggagggtttaggaggggaaggaatggaagagtttactttttcttttttaaattacgaacactatgaaat 5585384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 398 - 482
Target Start/End: Original strand, 9721132 - 9721216
Alignment:
Q  398 acattaagggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggacactatg 482  Q
    ||||||||||||||||||||| || ||||||| ||||||||||| || || ||||| ||||||||||||||||| ||||||||||    
T  9721132 acattaagggtgtgtttggattgaaggtttaggaggggaagggaggggagggtttatttttcatttttaaattacggacactatg 9721216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 400 - 486
Target Start/End: Original strand, 30487302 - 30487387
Alignment:
Q  400 attaagggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggacactatgaaat 486  Q
    |||||||||||||||||||||||||||||| ||||||||||| || || ||| |||||||||| ||||||| |||||| ||||||||    
T  30487302 attaagggtgtgtttggatggagggtttaggaggggaagggaggggagggttcacttttcattgttaaatt-aggacagtatgaaat 30487387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 405 - 486
Target Start/End: Complemental strand, 10818459 - 10818378
Alignment:
Q  405 gggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggacactatgaaat 486  Q
    |||||||||||||| ||| |||||| ||||| ||||| || || ||||||||||||||||||||||| ||||||||||||||    
T  10818459 gggtgtgtttggattgagagtttaggaggggtagggaggggagggtttacttttcatttttaaattacggacactatgaaat 10818378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 409 - 488
Target Start/End: Original strand, 19278039 - 19278118
Alignment:
Q  409 gtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggacactatgaaatat 488  Q
    ||||||||||||||||||||| ||||||||| | |  ||||||||||||||||||||||||||  |||||||| ||||||    
T  19278039 gtgtttggatggagggtttaggaggggaaggaaggagagagtttacttttcatttttaaattactgacactataaaatat 19278118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 400 - 482
Target Start/End: Original strand, 9719027 - 9719109
Alignment:
Q  400 attaagggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggacactatg 482  Q
    |||||| |||||||||||| |||||||||| ||||||||||| || ||  |||| ||||||||||||||||| ||||||||||    
T  9719027 attaagcgtgtgtttggattgagggtttaggaggggaagggaggggaggatttatttttcatttttaaattacggacactatg 9719109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 404 - 488
Target Start/End: Complemental strand, 14515715 - 14515631
Alignment:
Q  404 agggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggacactatgaaatat 488  Q
    |||||||||||||||||||||||||| ||||||||| | || || |||||  |||||||||||||||| | ||||||| ||||||    
T  14515715 agggtgtgtttggatggagggtttaggaggggaaggaaagggagggtttagatttcatttttaaattatgaacactataaaatat 14515631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 402 - 486
Target Start/End: Complemental strand, 33236196 - 33236112
Alignment:
Q  402 taagggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggacactatgaaat 486  Q
    ||||||||| ||||||||||| |||||  || |||| ||| || |||| ||||||||||||||||||||| ||||||||||||||    
T  33236196 taagggtgtatttggatggagagtttatgagaggaaaggaggggagagattacttttcatttttaaattacggacactatgaaat 33236112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 401 - 477
Target Start/End: Original strand, 10818226 - 10818302
Alignment:
Q  401 ttaagggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggaca 477  Q
    |||||||||||||||||| |||||||||| ||||||||||| || |  ||||| ||||| ||||||||||| |||||    
T  10818226 ttaagggtgtgtttggattgagggtttaggaggggaagggaggggattgtttatttttcttttttaaattacggaca 10818302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 406 - 488
Target Start/End: Complemental strand, 34176576 - 34176495
Alignment:
Q  406 ggtgtgtttggatggagggtttagaagggga-agggatggaagagtttacttttcatttttaaattaaggacactatgaaatat 488  Q
    |||||||||||||||||||||||  |||| | || ||||  |||||||| ||||||||||||||||| ||||||||||||||||    
T  34176576 ggtgtgtttggatggagggtttatgagggaagagagatg--agagtttagttttcatttttaaattacggacactatgaaatat 34176495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 406 - 488
Target Start/End: Complemental strand, 1390561 - 1390479
Alignment:
Q  406 ggtgtgtttggatggagggtttagaaggggaagggatggaagagttt-acttttcatttttaaattaaggacactatgaaatat 488  Q
    |||||||||||||| ||||||||| ||||||| ||| ||| | |||| |||||||||||||||||||  |||||||||||||||    
T  1390561 ggtgtgtttggatgaagggtttaggaggggaatgga-ggaggggttttacttttcatttttaaattactgacactatgaaatat 1390479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 407 - 477
Target Start/End: Complemental strand, 4097754 - 4097684
Alignment:
Q  407 gtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggaca 477  Q
    |||||||||||| |||||||||  ||||||||||| ||||| ||| ||||||| ||||||||||| |||||    
T  4097754 gtgtgtttggattgagggtttaagaggggaagggagggaagggttcacttttcttttttaaattacggaca 4097684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 402 - 476
Target Start/End: Original strand, 14515471 - 14515545
Alignment:
Q  402 taagggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggac 476  Q
    ||||||||||||||||| |||||||||| ||||||||||| || || ||||  ||||| ||||||||||| ||||    
T  14515471 taagggtgtgtttggattgagggtttaggaggggaagggaggggagggtttgtttttcttttttaaattacggac 14515545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 405 - 486
Target Start/End: Original strand, 16737997 - 16738078
Alignment:
Q  405 gggtgtgtttggatggagggtttagaaggggaagggatgg-aagagtttacttttcatttttaaattaaggacactatgaaat 486  Q
    ||||||||||||||||||||||||  || ||||| || || |||| |||||||||| ||||||||||| ||| ||||||||||    
T  16737997 gggtgtgtttggatggagggtttaagagaggaagagaggggaaga-tttacttttcgtttttaaattatggaaactatgaaat 16738078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 401 - 471
Target Start/End: Complemental strand, 16738242 - 16738173
Alignment:
Q  401 ttaagggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaatta 471  Q
    |||||||| ||||||||| |||||||||| | ||||||| | || |||||||||||||| |||||||||||    
T  16738242 ttaagggtttgtttggattgagggtttaggatgggaagg-aggggagagtttacttttcttttttaaatta 16738173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 402 - 471
Target Start/End: Original strand, 665839 - 665907
Alignment:
Q  402 taagggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaatta 471  Q
    |||||||||||||||||| ||||||||| |||||||| || || || ||| | |||||||||||||||||    
T  665839 taagggtgtgtttggatg-agggtttaggaggggaagtgaggggagggttcatttttcatttttaaatta 665907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 407 - 468
Target Start/End: Complemental strand, 2892844 - 2892783
Alignment:
Q  407 gtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaa 468  Q
    ||||||||| ||||||||||| ||||| ||||||| || ||| |||||||||| ||||||||    
T  2892844 gtgtgtttgaatggagggtttggaaggcgaagggaggggagaatttacttttcttttttaaa 2892783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 402 - 486
Target Start/End: Complemental strand, 3841332 - 3841248
Alignment:
Q  402 taagggtgtgtttggatggagggtttagaaggggaag-ggatggaagagtttacttttcatttttaaattaaggacactatgaaat 486  Q
    |||||||||||||||||| ||||||||| ||||||||   ||||||||  ||||||||| ||||||||||| ||||| ||| ||||    
T  3841332 taagggtgtgtttggatgaagggtttaggaggggaagaaaatggaaga-cttacttttcttttttaaattacggacattataaaat 3841248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 402 - 486
Target Start/End: Original strand, 21606852 - 21606926
Alignment:
Q  402 taagggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggacactatgaaat 486  Q
    |||||||||||||||||||||||||||| |||||          || ||||||||||||||||||||||| ||| ||||||||||    
T  21606852 taagggtgtgtttggatggagggtttaggagggg----------agggtttacttttcatttttaaattacggaaactatgaaat 21606926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 402 - 488
Target Start/End: Original strand, 4097233 - 4097319
Alignment:
Q  402 taagggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggacactatgaaatat 488  Q
    ||||||||||||||||| |||||||||| ||||||||| |    |||||||||||||  ||||| ||| | ||||| ||| ||||||    
T  4097233 taagggtgtgtttggattgagggtttaggaggggaaggaagatgagagtttacttttattttttgaatcacggacattataaaatat 4097319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 401 - 438
Target Start/End: Original strand, 1390316 - 1390353
Alignment:
Q  401 ttaagggtgtgtttggatggagggtttagaaggggaag 438  Q
    ||||||||||||||||||||||||||||  ||||||||    
T  1390316 ttaagggtgtgtttggatggagggtttatgaggggaag 1390353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 449 - 486
Target Start/End: Complemental strand, 2900109 - 2900072
Alignment:
Q  449 gtttacttttcatttttaaattaaggacactatgaaat 486  Q
    |||||||||||||||||||||||  |||||||||||||    
T  2900109 gtttacttttcatttttaaattatagacactatgaaat 2900072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 441
Target Start/End: Original strand, 15323225 - 15323262
Alignment:
Q  404 agggtgtgtttggatggagggtttagaaggggaaggga 441  Q
    ||||||||||||||| |||||||||| |||||||||||    
T  15323225 agggtgtgtttggattgagggtttaggaggggaaggga 15323262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 441
Target Start/End: Original strand, 15353364 - 15353401
Alignment:
Q  404 agggtgtgtttggatggagggtttagaaggggaaggga 441  Q
    ||||||||||||||| |||||||||| |||||||||||    
T  15353364 agggtgtgtttggattgagggtttaggaggggaaggga 15353401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 407 - 476
Target Start/End: Complemental strand, 19278278 - 19278210
Alignment:
Q  407 gtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggac 476  Q
    |||||||||||| ||| |||||| ||||||||||| || || ||||| ||||| ||||||||||| ||||    
T  19278278 gtgtgtttggattgagagtttaggaggggaagggaggggagggttta-ttttcttttttaaattacggac 19278210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 412 - 465
Target Start/End: Complemental strand, 23091195 - 23091142
Alignment:
Q  412 tttggatggagggtttagaaggggaagggatggaagagtttacttttcattttt 465  Q
    |||||||||||||||||| ||||||||||| || || | ||||||||| |||||    
T  23091195 tttggatggagggtttaggaggggaagggaggggagggcttacttttctttttt 23091142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 407 - 471
Target Start/End: Complemental strand, 26318546 - 26318482
Alignment:
Q  407 gtgtgtttggatggagggtttagaaggggaaggga-tggaagagtttacttttcatttttaaatta 471  Q
    |||||||||||||||| |||||| |||| ||||||  |||||| |||||||||| |||||||||||    
T  26318546 gtgtgtttggatggagagtttaggagggaaagggaggggaaga-tttacttttcttttttaaatta 26318482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 400 - 428
Target Start/End: Complemental strand, 4097538 - 4097510
Alignment:
Q  400 attaagggtgtgtttggatggagggttta 428  Q
    |||||||||||||||||||||||||||||    
T  4097538 attaagggtgtgtttggatggagggttta 4097510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 401 - 441
Target Start/End: Complemental strand, 9051779 - 9051739
Alignment:
Q  401 ttaagggtgtgtttggatggagggtttagaaggggaaggga 441  Q
    |||||||||||||||||| |||||||||  |||||||||||    
T  9051779 ttaagggtgtgtttggattgagggtttaagaggggaaggga 9051739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 401 - 441
Target Start/End: Original strand, 23090992 - 23091032
Alignment:
Q  401 ttaagggtgtgtttggatggagggtttagaaggggaaggga 441  Q
    |||||||||||||||||| || ||||||| |||||||||||    
T  23090992 ttaagggtgtgtttggattgaaggtttaggaggggaaggga 23091032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 407 - 471
Target Start/End: Complemental strand, 30850153 - 30850089
Alignment:
Q  407 gtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaatta 471  Q
    |||||||||||| |||||||||| |||| ||| || || |||||||||||||   ||||||||||    
T  30850153 gtgtgtttggattgagggtttaggagggaaagagaagggagagtttacttttttattttaaatta 30850089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 407 - 471
Target Start/End: Original strand, 33041473 - 33041537
Alignment:
Q  407 gtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaatta 471  Q
    |||||||||||| | |||||||| || |||| ||| || ||| |||| |||||||||||||||||    
T  33041473 gtgtgtttggattgggggtttaggagaggaaaggaggggagaatttatttttcatttttaaatta 33041537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 63; Significance: 4e-27; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 404 - 486
Target Start/End: Complemental strand, 24560461 - 24560379
Alignment:
Q  404 agggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggacactatgaaat 486  Q
    |||||||||||||||||||||||||| ||||||| |||||| ||||||||||||||||||||||||||  |||||||||||||    
T  24560461 agggtgtgtttggatggagggtttaggaggggaacggatgggagagtttacttttcatttttaaattaccgacactatgaaat 24560379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 404 - 486
Target Start/End: Complemental strand, 24253966 - 24253884
Alignment:
Q  404 agggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggacactatgaaat 486  Q
    |||||||||||||||||||||||||||||||||||||| |||||  |||||||||| ||||||||||| ||||| ||| ||||    
T  24253966 agggtgtgtttggatggagggtttagaaggggaagggagggaaggatttacttttcttttttaaattacggacattataaaat 24253884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 406 - 488
Target Start/End: Original strand, 41110323 - 41110405
Alignment:
Q  406 ggtgtgtttggatggagggtttagaaggggaagggatg-gaagagtttacttttcatttttaaattaaggacactatgaaatat 488  Q
    |||||||||||||||||| ||||| ||||||||||| | |||| ||||||||||||||||||||||| ||||||||||||||||    
T  41110323 ggtgtgtttggatggaggatttaggaggggaagggaggagaag-gtttacttttcatttttaaattacggacactatgaaatat 41110405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 402 - 486
Target Start/End: Complemental strand, 34641236 - 34641152
Alignment:
Q  402 taagggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggacactatgaaat 486  Q
    |||||||||||||||||||||||||||| ||||||||||| || || | ||||||||| ||||||||||| ||||| ||| ||||    
T  34641236 taagggtgtgtttggatggagggtttaggaggggaagggaggggagggcttacttttcttttttaaattacggacattataaaat 34641152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 402 - 471
Target Start/End: Original strand, 28581184 - 28581253
Alignment:
Q  402 taagggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaatta 471  Q
    |||| |||||||||||||||||||||||||| |||||||| || || ||||| |||||||||||||||||    
T  28581184 taagagtgtgtttggatggagggtttagaagaggaagggaggggagggtttagttttcatttttaaatta 28581253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 404 - 488
Target Start/End: Original strand, 18654600 - 18654684
Alignment:
Q  404 agggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggacactatgaaatat 488  Q
    |||||||||||||||||||||||||| |||| ||| ||||| || |||||  |||||||||||||||| |||| |||| ||||||    
T  18654600 agggtgtgtttggatggagggtttaggagggaaagagatgggagggtttagatttcatttttaaattacggaccctataaaatat 18654684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 404 - 486
Target Start/End: Original strand, 36568904 - 36568985
Alignment:
Q  404 agggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggacactatgaaat 486  Q
    |||||||||||||||||||||||||| || |||| ||| || |||||||| ||||||||||||||||  | ||||||||||||    
T  36568904 agggtgtgtttggatggagggtttaggagtggaatggaggggagagttta-ttttcatttttaaatttcgaacactatgaaat 36568985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 399 - 476
Target Start/End: Complemental strand, 220646 - 220569
Alignment:
Q  399 cattaagggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggac 476  Q
    |||| ||||| |||||||||||||||||||| ||| ||||||| || ||| |||||||||| ||||||||||| ||||    
T  220646 catttagggtctgtttggatggagggtttaggaggagaagggaggggagaatttacttttcttttttaaattacggac 220569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 401 - 486
Target Start/End: Original strand, 16275702 - 16275787
Alignment:
Q  401 ttaagggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggacactatgaaat 486  Q
    |||| |||||||||||||||| |||||| ||||| |||||| || |||||| ||| ||||||||||||||  ||||| ||||||||    
T  16275702 ttaacggtgtgtttggatggatggtttataagggaaagggaggggagagttcactattcatttttaaatttcggacattatgaaat 16275787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 407 - 487
Target Start/End: Original strand, 17474209 - 17474289
Alignment:
Q  407 gtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggacactatgaaata 487  Q
    |||||||||||| |||||||||| |||| |||  |||||| |||||||||||| ||||||||||| ||||| ||| |||||    
T  17474209 gtgtgtttggattgagggtttaggagggaaagtaatggaaaagtttacttttcttttttaaattacggacattataaaata 17474289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 406 - 489
Target Start/End: Complemental strand, 23028168 - 23028085
Alignment:
Q  406 ggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggacactatgaaatata 489  Q
    |||||||||||||||||||||| | |||||||  || || ||   |||||||| |||||||||||| |||||||||||||||||    
T  23028168 ggtgtgtttggatggagggtttgggaggggaaaagagggcaggacttactttttatttttaaattacggacactatgaaatata 23028085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 28 - 75
Target Start/End: Original strand, 32036352 - 32036399
Alignment:
Q  28 ccttgcttcagcttcataagctagagaattcactgtatcttctctttg 75  Q
    ||||||||||||||||||||| |||||||||||||| |||||||||||    
T  32036352 ccttgcttcagcttcataagcaagagaattcactgtgtcttctctttg 32036399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 396 - 486
Target Start/End: Original strand, 37102151 - 37102231
Alignment:
Q  396 atacattaagggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggacactatgaaat 486  Q
    |||||||||||||||||||||||||||||||||| |||||          || ||||| ||||||||||||||||| ||||||||||||||    
T  37102151 atacattaagggtgtgtttggatggagggtttaggagggg----------agggtttagttttcatttttaaattacggacactatgaaat 37102231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 398 - 488
Target Start/End: Original strand, 41039944 - 41040034
Alignment:
Q  398 acattaagggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggacactatgaaatat 488  Q
    ||||| |||||||||||||||||| ||||||| |||||||| ||  | ||  |||| |||||| ||||||||||  |||||||||||||||    
T  41039944 acatttagggtgtgtttggatggaaggtttaggaggggaagagagcgtaggctttaattttcaattttaaattacagacactatgaaatat 41040034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 406 - 487
Target Start/End: Complemental strand, 26136039 - 26135958
Alignment:
Q  406 ggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggacactatgaaata 487  Q
    |||||| ||| ||||||||||||| |||||||||||  | || ||||||||||| ||||||||||| ||||| ||| |||||    
T  26136039 ggtgtgattgaatggagggtttaggaggggaagggagtggagggtttacttttcttttttaaattacggacattataaaata 26135958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 402 - 476
Target Start/End: Complemental strand, 30200341 - 30200263
Alignment:
Q  402 taagggtgtgtttggat----ggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggac 476  Q
    |||||||||||||||||    ||||||| ||| ||||||||||| ||||| ||||||||||| ||||||||||| ||||    
T  30200341 taagggtgtgtttggattgagggagggtataggaggggaagggagggaagggtttacttttcttttttaaattacggac 30200263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 404 - 476
Target Start/End: Complemental strand, 28582753 - 28582681
Alignment:
Q  404 agggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggac 476  Q
    ||||||||||||||  |||| ||||| ||||||||||| || || ||||||||||| ||||||||||| ||||    
T  28582753 agggtgtgtttggactgaggatttaggaggggaagggaggggagggtttacttttcttttttaaattacggac 28582681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 401 - 471
Target Start/End: Complemental strand, 17474453 - 17474383
Alignment:
Q  401 ttaagggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaatta 471  Q
    |||||| ||||||||||| ||||||| || ||||||||||| || |||||| ||||||  |||||||||||    
T  17474453 ttaaggatgtgtttggattgagggttgaggaggggaagggaggggagagttaacttttattttttaaatta 17474383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 402 - 476
Target Start/End: Original strand, 21773780 - 21773854
Alignment:
Q  402 taagggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggac 476  Q
    ||||||| ||||||||| || ||||||| ||||||||||| ||||| || |||||||| ||| ||||||| ||||    
T  21773780 taagggtatgtttggattgaaggtttaggaggggaagggaaggaagggtatacttttcttttctaaattacggac 21773854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 402 - 476
Target Start/End: Original strand, 24560215 - 24560289
Alignment:
Q  402 taagggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggac 476  Q
    |||||||||||||||||  ||||||||| ||||||||||| || || ||||  ||||| ||||||||||| ||||    
T  24560215 taagggtgtgtttggattaagggtttaggaggggaagggaggggagggtttgtttttcttttttaaattacggac 24560289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 406 - 488
Target Start/End: Complemental strand, 52474157 - 52474075
Alignment:
Q  406 ggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggacactatgaaatat 488  Q
    |||||||||||| |  |||||||| |||||||||||  | || |||||||||| |||||||||||| |||  |||||||||||    
T  52474157 ggtgtgtttggaggatgggtttaggaggggaagggagaggagggtttactttttatttttaaattacggatcctatgaaatat 52474075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 406 - 486
Target Start/End: Original strand, 13082856 - 13082936
Alignment:
Q  406 ggtgtgtttggatggagggtttagaaggggaaggga-tggaagagtttacttttcatttttaaattaaggacactatgaaat 486  Q
    ||||||||||||||||||||||||||| | ||| ||  ||||| ||||| |||| ||||||||| || ||||||||||||||    
T  13082856 ggtgtgtttggatggagggtttagaagagaaagagagaggaag-gtttaatttttatttttaaaatacggacactatgaaat 13082936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 396 - 469
Target Start/End: Complemental strand, 16275947 - 16275874
Alignment:
Q  396 atacattaagggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaat 469  Q
    ||||||| ||||||||||||||| |||||||| |||||||| |||| | |  ||||||||||||  ||||||||    
T  16275947 atacatttagggtgtgtttggattgagggtttggaaggggaggggaggaacaagtttacttttctattttaaat 16275874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 410 - 487
Target Start/End: Original strand, 27541937 - 27542014
Alignment:
Q  410 tgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggacactatgaaata 487  Q
    ||||||||| |||||||||| ||||||||||| |  |  ||| || ||||||||||||||||  ||||||||||||||    
T  27541937 tgtttggattgagggtttaggaggggaagggaggagatggttcacatttcatttttaaattagagacactatgaaata 27542014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 401 - 476
Target Start/End: Complemental strand, 41110568 - 41110493
Alignment:
Q  401 ttaagggtgtgtttggatggagggtttagaaggggaaggga-tggaagagtttacttttcatttttaaattaaggac 476  Q
    |||||||||||||||||| ||||||||   |||||||||||  ||||| ||||||||||| ||||||||||| ||||    
T  41110568 ttaagggtgtgtttggattgagggtttgtgaggggaagggagaggaag-gtttacttttcgtttttaaattacggac 41110493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 401 - 476
Target Start/End: Complemental strand, 25655219 - 25655144
Alignment:
Q  401 ttaagggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggac 476  Q
    |||||||||||||||||| ||||||| |  ||| ||||||| || || |||||  |||||||||||||||| ||||    
T  25655219 ttaagggtgtgtttggattgagggttgaagaggagaagggaggggagggtttaactttcatttttaaattacggac 25655144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 404 - 486
Target Start/End: Original strand, 30200098 - 30200170
Alignment:
Q  404 agggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggacactatgaaat 486  Q
    |||||||||||||||||||||||||| |||||| ||          |||| ||||||||||||||||| ||||||||||||||    
T  30200098 agggtgtgtttggatggagggtttaggaggggaggg----------tttagttttcatttttaaattacggacactatgaaat 30200170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 408 - 471
Target Start/End: Original strand, 46204890 - 46204953
Alignment:
Q  408 tgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaatta 471  Q
    ||||||||||| |||||||||| ||| |||| ||||  || ||||||||||| |||||||||||    
T  46204890 tgtgtttggatcgagggtttagcaggagaagagatgagagtgtttacttttcttttttaaatta 46204953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 401 - 471
Target Start/End: Complemental strand, 6803448 - 6803378
Alignment:
Q  401 ttaagggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaatta 471  Q
    ||||| |||||||||||| || ||||||| |||||||| || |  |||||||| ||||| |||||||||||    
T  6803448 ttaagtgtgtgtttggattgaaggtttaggaggggaagagaggagagagtttaattttcttttttaaatta 6803378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 402 - 471
Target Start/End: Original strand, 24253719 - 24253789
Alignment:
Q  402 taagggtgtgtttggatggagggtttagaaggggaaggga-tggaagagtttacttttcatttttaaatta 471  Q
    ||||||||||||||||| |||||||||| |||| ||||||  || || ||| |||||| ||||||||||||    
T  24253719 taagggtgtgtttggattgagggtttaggagggaaagggagggggagtgttcacttttaatttttaaatta 24253789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 404 - 486
Target Start/End: Original strand, 25654971 - 25655052
Alignment:
Q  404 agggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggacactatgaaat 486  Q
    ||||||| ||| |||||||  ||||| ||||||||||| || || |||||||||||||||||| |||| | |||||| |||||    
T  25654971 agggtgtatttagatggaga-tttaggaggggaagggaggggagggtttacttttcatttttatattacgaacactaagaaat 25655052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 436
Target Start/End: Original strand, 220403 - 220440
Alignment:
Q  399 cattaagggtgtgtttggatggagggtttagaagggga 436  Q
    |||||||||||| |||||||||||||||||| ||||||    
T  220403 cattaagggtgtatttggatggagggtttaggagggga 220440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 408 - 441
Target Start/End: Original strand, 10748299 - 10748332
Alignment:
Q  408 tgtgtttggatggagggtttagaaggggaaggga 441  Q
    |||||||||||||||||||||| |||||||||||    
T  10748299 tgtgtttggatggagggtttaggaggggaaggga 10748332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 469
Target Start/End: Complemental strand, 25499139 - 25499074
Alignment:
Q  404 agggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaat 469  Q
    |||| |||||||||||||| |||||  ||||| || || ||||| ||||||||||| |||||||||    
T  25499139 agggggtgtttggatggagagtttaagagggggagagagggaagggtttacttttcttttttaaat 25499074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 408 - 477
Target Start/End: Complemental strand, 55428619 - 55428550
Alignment:
Q  408 tgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggaca 477  Q
    ||||||||||| |||||||||| ||||||||||| || |   |||||||||| | ||||||||| |||||    
T  55428619 tgtgtttggattgagggtttaggaggggaagggaggggatgatttacttttcttctttaaattacggaca 55428550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 400 - 452
Target Start/End: Complemental strand, 18654849 - 18654797
Alignment:
Q  400 attaagggtgtgtttggatggagggtttagaaggggaagggatggaagagttt 452  Q
    |||||| ||||||||| || |||||||||| ||||||||||| || |||||||    
T  18654849 attaagagtgtgtttgaattgagggtttaggaggggaagggaggggagagttt 18654797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 411 - 471
Target Start/End: Original strand, 51819146 - 51819205
Alignment:
Q  411 gtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaatta 471  Q
    ||||||||||| |||||||||||||||| || ||  || |||| |||||||||||||||||    
T  51819146 gtttggatggaaggtttagaaggggaagagagggggga-tttatttttcatttttaaatta 51819205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 61; Significance: 6e-26; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 402 - 486
Target Start/End: Complemental strand, 30010578 - 30010494
Alignment:
Q  402 taagggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggacactatgaaat 486  Q
    |||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||| |||||| |||||||| |||||    
T  30010578 taagggtgtgtttggatggagggtttagaaggggaagggaggggagggtttacttttcattttgaaattacggacactacgaaat 30010494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 404 - 486
Target Start/End: Original strand, 40094933 - 40095015
Alignment:
Q  404 agggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggacactatgaaat 486  Q
    |||||||||||||||||||||||||| ||||||||| | || || ||||||||||||||||||||||| ||||||||||||||    
T  40094933 agggtgtgtttggatggagggtttaggaggggaaggaaggggagggtttacttttcatttttaaattacggacactatgaaat 40095015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 406 - 486
Target Start/End: Complemental strand, 12234252 - 12234172
Alignment:
Q  406 ggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggacactatgaaat 486  Q
    |||||||||||||||||||||||| ||||||||||| || || ||||| ||||||||||||||||| |||||||| |||||    
T  12234252 ggtgtgtttggatggagggtttaggaggggaagggaggggagggtttagttttcatttttaaattacggacactacgaaat 12234172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 402 - 488
Target Start/End: Complemental strand, 8530045 - 8529959
Alignment:
Q  402 taagggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggacactatgaaatat 488  Q
    ||||| |||||||||||| || |||||| ||||||||||| |  | |||||||||||||||||||||||| ||||||||||||||||    
T  8530045 taaggatgtgtttggatgaagagtttaggaggggaagggaggtgaaagtttacttttcatttttaaattacggacactatgaaatat 8529959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 404 - 486
Target Start/End: Original strand, 38509894 - 38509976
Alignment:
Q  404 agggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggacactatgaaat 486  Q
    ||||||||||||||| |||||||||| |||||||||||  | || ||| ||||||||||||||||||| ||||||||||||||    
T  38509894 agggtgtgtttggatagagggtttaggaggggaagggagaggagggttcacttttcatttttaaattacggacactatgaaat 38509976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 404 - 486
Target Start/End: Complemental strand, 41498649 - 41498566
Alignment:
Q  404 agggtgtgtttggatggagggtttagaagggg-aagggatggaagagtttacttttcatttttaaattaaggacactatgaaat 486  Q
    ||||||||||||||||||| |||||| ||||| |||||| || ||  |||||||||||||||||||||| ||||||||||||||    
T  41498649 agggtgtgtttggatggagagtttaggaggggtaagggaggggaggatttacttttcatttttaaattacggacactatgaaat 41498566  T

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Target: chr1; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 404 - 486
Target Start/End: Original strand, 2858932 - 2859014
Alignment:
Q  404 agggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggacactatgaaat 486  Q
    |||||||||||||||||||||||||| |||| |||||| || || ||||||||||||||| |||||||  ||| |||||||||    
T  2858932 agggtgtgtttggatggagggtttaggagggaaagggaggggagggtttacttttcatttctaaattacagaccctatgaaat 2859014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 402 - 471
Target Start/End: Complemental strand, 40095180 - 40095111
Alignment:
Q  402 taagggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaatta 471  Q
    ||||||||||||||||| ||||||||||||||  |||||| ||||| ||||||||||| |||||||||||    
T  40095180 taagggtgtgtttggattgagggtttagaaggaaaagggaaggaagggtttacttttcgtttttaaatta 40095111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 407 - 479
Target Start/End: Original strand, 20576136 - 20576208
Alignment:
Q  407 gtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggacact 479  Q
    |||||||||||| |||||||||| ||||||||||| || ||||||||  |||||||||||||||| |||||||    
T  20576136 gtgtgtttggatagagggtttaggaggggaagggaggggagagtttagatttcatttttaaattacggacact 20576208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 404 - 471
Target Start/End: Complemental strand, 525344 - 525277
Alignment:
Q  404 agggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaatta 471  Q
    ||||||||||||||| |||||||||| | ||||||||| ||||||||| |||||| ||||||||||||    
T  525344 agggtgtgtttggattgagggtttaggacgggaagggaaggaagagttcacttttaatttttaaatta 525277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 402 - 479
Target Start/End: Original strand, 35349464 - 35349539
Alignment:
Q  402 taagggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggacact 479  Q
    |||||||||||||||||||||||||||  |||||| |||  || || ||||||||||||||||||||||| |||||||    
T  35349464 taagggtgtgtttggatggagggtttaagaggggagggg--gggagggtttacttttcatttttaaattacggacact 35349539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 401 - 471
Target Start/End: Original strand, 41498401 - 41498471
Alignment:
Q  401 ttaagggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaatta 471  Q
    |||||||||||||||||| |||||||||| |||||||| || || || ||||||||||| |||||||||||    
T  41498401 ttaagggtgtgtttggattgagggtttaggaggggaagtgaggggagggtttacttttcgtttttaaatta 41498471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 402 - 487
Target Start/End: Complemental strand, 47261517 - 47261432
Alignment:
Q  402 taagggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggacactatgaaata 487  Q
    ||||||||||||||||||| || |||||||||||||| || || || ||||| ||||| |||||||| || ||||||||| |||||    
T  47261517 taagggtgtgtttggatgggggatttagaaggggaagagagggtagggtttaattttcttttttaaagtacggacactataaaata 47261432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 404 - 476
Target Start/End: Complemental strand, 32951562 - 32951490
Alignment:
Q  404 agggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggac 476  Q
    ||||||||||||||| ||| |||||| || |||||||| || |||||||||||||| ||||||||||| ||||    
T  32951562 agggtgtgtttggattgagagtttaggagaggaagggaggggagagtttacttttcgtttttaaattacggac 32951490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 401 - 476
Target Start/End: Original strand, 12234007 - 12234082
Alignment:
Q  401 ttaagggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggac 476  Q
    |||||||||||||||||| |||||||||| ||||||||||| || || | ||| ||||| ||||||||||| ||||    
T  12234007 ttaagggtgtgtttggattgagggtttaggaggggaagggagggtagggcttaattttcttttttaaattacggac 12234082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 401 - 455
Target Start/End: Complemental strand, 20607464 - 20607410
Alignment:
Q  401 ttaagggtgtgtttggatggagggtttagaaggggaagggatggaagagtttact 455  Q
    ||||||||||||||||||||||||||||| ||||||||||| || || |||||||    
T  20607464 ttaagggtgtgtttggatggagggtttaggaggggaagggaggggagggtttact 20607410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 408 - 486
Target Start/End: Complemental strand, 35513037 - 35512959
Alignment:
Q  408 tgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggacactatgaaat 486  Q
    |||||||||||||||||||||| ||||||||||| || || | ||||||||  ||||||||||| ||||| ||| ||||    
T  35513037 tgtgtttggatggagggtttaggaggggaagggaggggagggcttacttttattttttaaattatggacattataaaat 35512959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 402 - 486
Target Start/End: Complemental strand, 7444741 - 7444657
Alignment:
Q  402 taagggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggacactatgaaat 486  Q
    |||| ||||||||||||| || |||||||| |||||| || || || ||||| |||||||||| |||||| ||||||||| ||||    
T  7444741 taagagtgtgtttggatgaagagtttagaaagggaagagaggggagggtttagttttcattttaaaattacggacactataaaat 7444657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 404 - 476
Target Start/End: Original strand, 30010332 - 30010404
Alignment:
Q  404 agggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggac 476  Q
    ||||||||||||||| |||||||||| ||||||||||| || ||  |||||||||| | ||||||||| ||||    
T  30010332 agggtgtgtttggattgagggtttaggaggggaagggaggggaggatttacttttcttgtttaaattacggac 30010404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 404 - 476
Target Start/End: Complemental strand, 35349706 - 35349634
Alignment:
Q  404 agggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggac 476  Q
    |||||||||||||||  ||||||||  ||||||||||| || || ||||||||||| ||||||||||| ||||    
T  35349706 agggtgtgtttggattaagggtttatgaggggaagggaggggagggtttacttttcgtttttaaattacggac 35349634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 412 - 471
Target Start/End: Complemental strand, 25268500 - 25268441
Alignment:
Q  412 tttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaatta 471  Q
    ||||||||||||||||||||||||||| || || || ||||||||| | |||||||||||    
T  25268500 tttggatggagggtttagaaggggaagtgaggggagggtttactttccttttttaaatta 25268441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 404 - 486
Target Start/End: Original strand, 2470730 - 2470812
Alignment:
Q  404 agggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggacactatgaaat 486  Q
    |||||||||||||||||||||||||| |||||||| ||  | || ||||  ||| ||||||||||||| | ||||||| ||||    
T  2470730 agggtgtgtttggatggagggtttaggaggggaagagaatggagggtttcgtttacatttttaaattacgaacactataaaat 2470812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 398 - 471
Target Start/End: Original strand, 43551990 - 43552063
Alignment:
Q  398 acattaagggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaatta 471  Q
    ||||| |||||||||||||||||| |||||||  || ||| |||||  || ||||| |||||||||||||||||    
T  43551990 acatttagggtgtgtttggatggaaggtttaggcggcgaaaggatgtgagggtttatttttcatttttaaatta 43552063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 401 - 470
Target Start/End: Complemental strand, 43553178 - 43553109
Alignment:
Q  401 ttaagggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaatt 470  Q
    ||||||| |||||||||| | | |||||| || |||| |||||| ||| |||||||||||||||||||||    
T  43553178 ttaagggagtgtttggattgggagtttaggagaggaaaggatggtagaatttacttttcatttttaaatt 43553109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 404 - 471
Target Start/End: Complemental strand, 35928056 - 35927989
Alignment:
Q  404 agggtgtgtttggatggagggtttagaaggggaa-gggatggaagagtttacttttcatttttaaatta 471  Q
    ||||||||||||||| ||||| |||||||||||| |||| ||| || |||||||||| |||||||||||    
T  35928056 agggtgtgtttggattgagggcttagaaggggaaggggagggatga-tttacttttcttttttaaatta 35927989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 401 - 476
Target Start/End: Original strand, 10391869 - 10391944
Alignment:
Q  401 ttaagggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggac 476  Q
    |||||||||  ||||||| |||| ||||| |||||||  || || || ||||||||||||||||||||||| ||||    
T  10391869 ttaagggtgaatttggattgaggttttaggaggggaaacgaggggagggtttacttttcatttttaaattacggac 10391944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 406 - 468
Target Start/End: Original strand, 23536782 - 23536844
Alignment:
Q  406 ggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaa 468  Q
    |||||||||||||||||| ||||| ||| |||||||||| || ||||| |||||  |||||||    
T  23536782 ggtgtgtttggatggaggatttaggaggagaagggatgggagtgtttaattttctattttaaa 23536844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 403 - 441
Target Start/End: Original strand, 26324013 - 26324051
Alignment:
Q  403 aagggtgtgtttggatggagggtttagaaggggaaggga 441  Q
    |||||||||||||||| |||||||||| |||||||||||    
T  26324013 aagggtgtgtttggattgagggtttaggaggggaaggga 26324051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 402 - 468
Target Start/End: Complemental strand, 38510140 - 38510074
Alignment:
Q  402 taagggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaa 468  Q
    |||| ||||||||||||  ||||||||| ||||||||||| || || ||||| ||||| ||||||||    
T  38510140 taagagtgtgtttggattaagggtttaggaggggaagggaggggagggtttagttttcttttttaaa 38510074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 408 - 486
Target Start/End: Complemental strand, 41676516 - 41676443
Alignment:
Q  408 tgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggacactatgaaat 486  Q
    ||||||||||| ||||||||||     |||| || || || ||||||||||||||||||||||| ||||||||| ||||    
T  41676516 tgtgtttggatcgagggtttag-----gaagagaggggagggtttacttttcatttttaaattacggacactataaaat 41676443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 402 - 435
Target Start/End: Original strand, 1085487 - 1085520
Alignment:
Q  402 taagggtgtgtttggatggagggtttagaagggg 435  Q
    |||||||||||||||||||||||||||| |||||    
T  1085487 taagggtgtgtttggatggagggtttaggagggg 1085520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 441
Target Start/End: Complemental strand, 1085734 - 1085697
Alignment:
Q  404 agggtgtgtttggatggagggtttagaaggggaaggga 441  Q
    ||||||||||||||| |||||||||| |||||||||||    
T  1085734 agggtgtgtttggatagagggtttaggaggggaaggga 1085697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 411 - 476
Target Start/End: Complemental strand, 2859169 - 2859104
Alignment:
Q  411 gtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggac 476  Q
    |||||||| || ||||||| ||||||||||| || || ||||||||||  ||||||||||| ||||    
T  2859169 gtttggattgaaggtttaggaggggaagggaggggagggtttacttttattttttaaattacggac 2859104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 407 - 476
Target Start/End: Original strand, 7444481 - 7444550
Alignment:
Q  407 gtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggac 476  Q
    ||||||| |||| |||||||| | ||| ||||||| || || ||||||||||| ||||||||||| ||||    
T  7444481 gtgtgttaggattgagggtttgggaggagaagggaagggagggtttacttttcttttttaaattacggac 7444550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 408 - 469
Target Start/End: Original strand, 51597672 - 51597733
Alignment:
Q  408 tgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaat 469  Q
    ||||||||||| |||||||||  |  |||||||| || |||||||||||||| |||||||||    
T  51597672 tgtgtttggattgagggtttatgaaaggaagggaggggagagtttacttttcttttttaaat 51597733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 446 - 478
Target Start/End: Complemental strand, 40964801 - 40964769
Alignment:
Q  446 agagtttacttttcatttttaaattaaggacac 478  Q
    |||||||||||||||||||||||||| ||||||    
T  40964801 agagtttacttttcatttttaaattacggacac 40964769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 59; Significance: 9e-25; HSPs: 47)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 404 - 486
Target Start/End: Complemental strand, 54935313 - 54935231
Alignment:
Q  404 agggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggacactatgaaat 486  Q
    |||||||||||||||||||||||||| ||||||||||| || || ||||| ||||||||||||||||| ||||||||||||||    
T  54935313 agggtgtgtttggatggagggtttaggaggggaagggaggggagggtttatttttcatttttaaattacggacactatgaaat 54935231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 402 - 486
Target Start/End: Complemental strand, 45742136 - 45742052
Alignment:
Q  402 taagggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggacactatgaaat 486  Q
    |||||||||||||||||| |||||||||  ||| |||||| || |||||||||||||||||||||||||| ||||||||||||||    
T  45742136 taagggtgtgtttggatgaagggtttaggcgggaaagggaggggagagtttacttttcatttttaaattacggacactatgaaat 45742052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 401 - 476
Target Start/End: Complemental strand, 1968606 - 1968531
Alignment:
Q  401 ttaagggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggac 476  Q
    |||||||||||||||||| |||||||||| ||||||||||| ||||||||||| ||||||||||||||||| ||||    
T  1968606 ttaagggtgtgtttggattgagggtttaggaggggaagggagggaagagtttaattttcatttttaaattacggac 1968531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 404 - 488
Target Start/End: Complemental strand, 37711367 - 37711283
Alignment:
Q  404 agggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggacactatgaaatat 488  Q
    |||||||||||||||||||||||||| ||||||||||| || || |||||  |||||||||||||||| ||||||||| ||||||    
T  37711367 agggtgtgtttggatggagggtttaggaggggaagggaggggagggtttagatttcatttttaaattacggacactataaaatat 37711283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 402 - 486
Target Start/End: Complemental strand, 41174591 - 41174507
Alignment:
Q  402 taagggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggacactatgaaat 486  Q
    |||||||||||||||||||||||||||| ||||||||||| || |  ||||| ||||||||||||| ||| ||||||||||||||    
T  41174591 taagggtgtgtttggatggagggtttaggaggggaagggaggggatggtttagttttcatttttaatttagggacactatgaaat 41174507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 404 - 486
Target Start/End: Original strand, 31348316 - 31348403
Alignment:
Q  404 agggtgtgtttggatggagggtttaga-----aggggaagggatggaagagtttacttttcatttttaaattaaggacactatgaaat 486  Q
    ||||||||||||||||||||||||||      ||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||    
T  31348316 agggtgtgtttggatggagggtttagtttatgaggggaagggagggaagggtttacttttcatttttaaattacggacactatgaaat 31348403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 402 - 486
Target Start/End: Original strand, 49735466 - 49735550
Alignment:
Q  402 taagggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggacactatgaaat 486  Q
    ||||||||||||||||| |||||||||| ||||||||||| || || ||| ||||||||||||||||||| |||||  |||||||    
T  49735466 taagggtgtgtttggattgagggtttaggaggggaagggaggggagggttcacttttcatttttaaattacggacaacatgaaat 49735550  T

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Target: chr4; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 404 - 485
Target Start/End: Complemental strand, 54320678 - 54320597
Alignment:
Q  404 agggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggacactatgaaa 485  Q
    ||||||||||||||| |||||||||| ||||||||||| || || ||||  |||| |||||||||||| |||||||||||||    
T  54320678 agggtgtgtttggattgagggtttaggaggggaagggaggggagggtttgattttaatttttaaattacggacactatgaaa 54320597  T

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Target: chr4; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 404 - 488
Target Start/End: Original strand, 5730830 - 5730914
Alignment:
Q  404 agggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggacactatgaaatat 488  Q
    |||||||||||||||||||||||||| |||| ||| ||||| || |||||  |||||||||||||||| |||| |||| ||||||    
T  5730830 agggtgtgtttggatggagggtttaggagggaaagagatgggagggtttagatttcatttttaaattacggaccctataaaatat 5730914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 406 - 486
Target Start/End: Complemental strand, 27735987 - 27735907
Alignment:
Q  406 ggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggacactatgaaat 486  Q
    |||||||||||||||||||||||| ||||||||||| |  || ||| | ||||||||||||||||| ||||||||| ||||    
T  27735987 ggtgtgtttggatggagggtttaggaggggaagggaggatagggttcatttttcatttttaaattacggacactataaaat 27735907  T

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Target: chr4; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 406 - 486
Target Start/End: Original strand, 54576329 - 54576409
Alignment:
Q  406 ggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggacactatgaaat 486  Q
    |||||||||||||||||||||||||||||||||||| || || | ||||||||| |||||| |||| ||||| ||| ||||    
T  54576329 ggtgtgtttggatggagggtttagaaggggaagggaggggagggcttacttttcttttttagattacggacattataaaat 54576409  T

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Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 412 - 482
Target Start/End: Original strand, 17938115 - 17938185
Alignment:
Q  412 tttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggacactatg 482  Q
    |||||||||||||||||| ||||||| ||| ||||||||||| ||||| ||||||||||| ||||| ||||    
T  17938115 tttggatggagggtttaggaggggaatggagggaagagtttaattttcgtttttaaattatggacattatg 17938185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 404 - 486
Target Start/End: Complemental strand, 37761708 - 37761626
Alignment:
Q  404 agggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggacactatgaaat 486  Q
    |||||||||||||||||||| |||| |||||||||||| || || | || |||||| ||||||||||| ||||| ||||||||    
T  37761708 agggtgtgtttggatggaggatttaaaaggggaagggaggggagggcttccttttcttttttaaattatggacattatgaaat 37761626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 399 - 471
Target Start/End: Original strand, 54935062 - 54935135
Alignment:
Q  399 cattaagggtgtgtttggatggagggtttagaaggggaaggga-tggaagagtttacttttcatttttaaatta 471  Q
    |||||||||||||||||||| |||||||||| |||||||||||  || || ||||||||||| |||||||||||    
T  54935062 cattaagggtgtgtttggattgagggtttaggaggggaagggagggggagggtttacttttcttttttaaatta 54935135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 402 - 469
Target Start/End: Complemental strand, 31348567 - 31348500
Alignment:
Q  402 taagggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaat 469  Q
    ||||||||||||||||| ||| |||||| ||||||||||| || || ||||||||||| |||||||||    
T  31348567 taagggtgtgtttggattgagagtttaggaggggaagggaggggagggtttacttttcttttttaaat 31348500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 407 - 470
Target Start/End: Complemental strand, 46007942 - 46007879
Alignment:
Q  407 gtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaatt 470  Q
    |||||||||||| |||||||||| ||||||||||| || || ||||||||||| ||||||||||    
T  46007942 gtgtgtttggattgagggtttaggaggggaagggaggggagggtttacttttcttttttaaatt 46007879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 401 - 471
Target Start/End: Complemental strand, 2248048 - 2247978
Alignment:
Q  401 ttaagggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaatta 471  Q
    |||| ||||||||||||| |||||||||| ||| |||| || || |||||||||||||| |||||||||||    
T  2248048 ttaatggtgtgtttggattgagggtttaggaggagaagtgaagggagagtttacttttcttttttaaatta 2247978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 401 - 471
Target Start/End: Complemental strand, 6938494 - 6938424
Alignment:
Q  401 ttaagggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaatta 471  Q
    ||||||||||||||||||||| ||||||  ||||||| ||| || || ||| |||||||||||||||||||    
T  6938494 ttaagggtgtgtttggatggaaggtttatgaggggaatggaggggagggttcacttttcatttttaaatta 6938424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 400 - 441
Target Start/End: Original strand, 53260714 - 53260755
Alignment:
Q  400 attaagggtgtgtttggatggagggtttagaaggggaaggga 441  Q
    |||||||||||||||||||||||||||||| |||||||||||    
T  53260714 attaagggtgtgtttggatggagggtttaggaggggaaggga 53260755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 408 - 476
Target Start/End: Original strand, 27735749 - 27735817
Alignment:
Q  408 tgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggac 476  Q
    ||||||||||| |||||||||| ||||||||||| |  || ||||| ||||||||||||||||| ||||    
T  27735749 tgtgtttggatcgagggtttaggaggggaagggaagagagggtttaattttcatttttaaattacggac 27735817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 419 - 486
Target Start/End: Original strand, 21694905 - 21694972
Alignment:
Q  419 ggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggacactatgaaat 486  Q
    ||||||||||| ||||||||||| || || | ||||||||| ||||||||||| ||||||||| ||||    
T  21694905 ggagggtttaggaggggaagggacgggagggcttacttttcttttttaaattacggacactataaaat 21694972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 404 - 471
Target Start/End: Original strand, 22186719 - 22186786
Alignment:
Q  404 agggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaatta 471  Q
    ||||||| ||||||| |||||||||| | ||||||||| || |||||| |||||| ||||||||||||    
T  22186719 agggtgtatttggattgagggtttaggaagggaagggagggcagagttcacttttaatttttaaatta 22186786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 404 - 471
Target Start/End: Original strand, 26166937 - 26167004
Alignment:
Q  404 agggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaatta 471  Q
    ||||||||||||||| |||||||||| ||||||| ||| || |||||||  ||||| |||||||||||    
T  26166937 agggtgtgtttggattgagggtttaggaggggaatggaggggagagtttgtttttcttttttaaatta 26167004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 412 - 479
Target Start/End: Complemental strand, 35248922 - 35248855
Alignment:
Q  412 tttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggacact 479  Q
    |||||||||||||||||| || || ||||| || || |||||||||||| |||||||||| |||||||    
T  35248922 tttggatggagggtttaggagaggtagggaggggagggtttacttttcaattttaaattatggacact 35248855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 433 - 488
Target Start/End: Complemental strand, 44784206 - 44784151
Alignment:
Q  433 gggaagggatggaagagtttacttttcatttttaaattaaggacactatgaaatat 488  Q
    ||||||||| ||||||||||||||||| ||||||||||| | |||||| |||||||    
T  44784206 gggaagggagggaagagtttacttttcgtttttaaattacgaacactacgaaatat 44784151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 401 - 471
Target Start/End: Original strand, 37761462 - 37761532
Alignment:
Q  401 ttaagggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaatta 471  Q
    |||||||||||||||||| ||| |||||| ||| ||| ||| || |||||| |||||| ||||||||||||    
T  37761462 ttaagggtgtgtttggattgagagtttaggaggagaaaggagggtagagttcacttttaatttttaaatta 37761532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 402 - 471
Target Start/End: Original strand, 24565344 - 24565413
Alignment:
Q  402 taagggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaatta 471  Q
    |||||||||||||||||||| ||||||| | ||||||    || || |||||||||||||||||||||||    
T  24565344 taagggtgtgtttggatggaaggtttaggaagggaagactggggagggtttacttttcatttttaaatta 24565413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 406 - 471
Target Start/End: Complemental strand, 47846298 - 47846233
Alignment:
Q  406 ggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaatta 471  Q
    ||||||||||||| |||||||||  ||| |||||||||| || ||||||||||  |||||||||||    
T  47846298 ggtgtgtttggattgagggtttaagaggagaagggatgggagggtttacttttattttttaaatta 47846233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 402 - 471
Target Start/End: Original strand, 56135747 - 56135816
Alignment:
Q  402 taagggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaatta 471  Q
    ||||||||||||||||| |||||||||| ||||||||||| || || ||| | ||||  |||||||||||    
T  56135747 taagggtgtgtttggattgagggtttaggaggggaagggaggggagggttcatttttattttttaaatta 56135816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 404 - 488
Target Start/End: Original strand, 1968351 - 1968435
Alignment:
Q  404 agggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggacactatgaaatat 488  Q
    |||||| ||||||||  |||||||   |||| |||||| || || |||||||||||| | |||||||| ||||||||||||||||    
T  1968351 agggtgcgtttggattaagggtttgagagggaaagggaggggagggtttacttttcaatattaaattatggacactatgaaatat 1968435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 404 - 480
Target Start/End: Complemental strand, 36151818 - 36151743
Alignment:
Q  404 agggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggacacta 480  Q
    ||||||||||| |||||||| ||||| |||| |||| | || ||| |||||||||||||||||||||| | ||||||    
T  36151818 agggtgtgtttagatggaggatttaggaggg-aaggaaaggtagaatttacttttcatttttaaattatgaacacta 36151743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 401 - 441
Target Start/End: Original strand, 37711135 - 37711175
Alignment:
Q  401 ttaagggtgtgtttggatggagggtttagaaggggaaggga 441  Q
    |||||||||||||||||| |||||||||| |||||||||||    
T  37711135 ttaagggtgtgtttggattgagggtttaggaggggaaggga 37711175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 420 - 471
Target Start/End: Complemental strand, 24565572 - 24565521
Alignment:
Q  420 gagggtttagaaggggaagggatggaagagtttacttttcatttttaaatta 471  Q
    |||||||||| ||||||||||| |||||| ||||| |||| |||||||||||    
T  24565572 gagggtttaggaggggaagggagggaagaatttacatttcttttttaaatta 24565521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 404 - 471
Target Start/End: Complemental strand, 47433953 - 47433886
Alignment:
Q  404 agggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaatta 471  Q
    ||||||||||||| | || ||||||| |||||||||||  | || ||||||||||| |||||||||||    
T  47433953 agggtgtgtttgggttgacggtttaggaggggaagggagaggagggtttacttttcttttttaaatta 47433886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 404 - 471
Target Start/End: Complemental strand, 54576573 - 54576506
Alignment:
Q  404 agggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaatta 471  Q
    |||||||||||||||  ||||||||  || ||||||||  |||||||| |||||| ||||||||||||    
T  54576573 agggtgtgtttggattaagggtttaagagaggaagggagagaagagttcacttttaatttttaaatta 54576506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 401 - 471
Target Start/End: Original strand, 29798285 - 29798355
Alignment:
Q  401 ttaagggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaatta 471  Q
    |||||||||||||||||| || ||||||| |||||||| ||  | | |||||||||||  |||||||||||    
T  29798285 ttaagggtgtgtttggattgatggtttaggaggggaagagagaggatagtttacttttattttttaaatta 29798355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 398 - 440
Target Start/End: Original strand, 47433712 - 47433754
Alignment:
Q  398 acattaagggtgtgtttggatggagggtttagaaggggaaggg 440  Q
    |||||||||||| |||| |||||||||||||| ||||||||||    
T  47433712 acattaagggtgcgtttagatggagggtttaggaggggaaggg 47433754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 401 - 471
Target Start/End: Original strand, 54320432 - 54320501
Alignment:
Q  401 ttaagggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaatta 471  Q
    |||||||||||||||||| |||||||||| |||| |||||| || || ||||  ||||| |||||||||||    
T  54320432 ttaagggtgtgtttggattgagggtttaggagggaaaggga-gggagggtttgattttcttttttaaatta 54320501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 401 - 438
Target Start/End: Complemental strand, 11089756 - 11089719
Alignment:
Q  401 ttaagggtgtgtttggatggagggtttagaaggggaag 438  Q
    |||||||||||||||||| |||| ||||||||||||||    
T  11089756 ttaagggtgtgtttggattgaggatttagaaggggaag 11089719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 402 - 471
Target Start/End: Complemental strand, 17938354 - 17938285
Alignment:
Q  402 taagggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaatta 471  Q
    ||||||| ||||||||| |||  ||||| |||||||||||    |||||||||||||| |||||||||||    
T  17938354 taagggtatgtttggattgagaatttaggaggggaagggagatgagagtttacttttcttttttaaatta 17938285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 400 - 477
Target Start/End: Complemental strand, 21695136 - 21695059
Alignment:
Q  400 attaagggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggaca 477  Q
    ||||||||||||||||||| | |||||||  ||||||||| |  | || |||||||||||  |||||||||| |||||    
T  21695136 attaagggtgtgtttggattgggggtttatgaggggaaggaagcggagggtttacttttctattttaaattatggaca 21695059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 441
Target Start/End: Complemental strand, 49735736 - 49735699
Alignment:
Q  404 agggtgtgtttggatggagggtttagaaggggaaggga 441  Q
    ||||||||||||||| |||||||||| |||||||||||    
T  49735736 agggtgtgtttggattgagggtttaggaggggaaggga 49735699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 400 - 452
Target Start/End: Complemental strand, 5731079 - 5731027
Alignment:
Q  400 attaagggtgtgtttggatggagggtttagaaggggaagggatggaagagttt 452  Q
    |||||| ||||||||| || |||||||||| ||||||||||| || |||||||    
T  5731079 attaagagtgtgtttgaattgagggtttaggaggggaagggaggggagagttt 5731027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 402 - 438
Target Start/End: Complemental strand, 5825142 - 5825106
Alignment:
Q  402 taagggtgtgtttggatggagggtttagaaggggaag 438  Q
    |||||||||||||||||||||||||||| || |||||    
T  5825142 taagggtgtgtttggatggagggtttaggagaggaag 5825106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 424 - 484
Target Start/End: Complemental strand, 6891584 - 6891524
Alignment:
Q  424 gtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggacactatgaa 484  Q
    |||||| |||||||| || || |||||||  ||||| ||||||||||| ||||||||||||    
T  6891584 gtttaggaggggaagagaggggagagtttgattttcgtttttaaattatggacactatgaa 6891524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 404 - 476
Target Start/End: Original strand, 45741890 - 45741962
Alignment:
Q  404 agggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggac 476  Q
    ||||||||||||||| |||||||||| ||||||| | |||  ||  |||||||||  ||||||||||| ||||    
T  45741890 agggtgtgtttggattgagggtttaggaggggaatgaatgtgaggatttacttttgttttttaaattacggac 45741962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 404 - 436
Target Start/End: Complemental strand, 56135965 - 56135933
Alignment:
Q  404 agggtgtgtttggatggagggtttagaagggga 436  Q
    |||||||||||||||||||||||||| ||||||    
T  56135965 agggtgtgtttggatggagggtttaggagggga 56135933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 58; Significance: 4e-24; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 401 - 486
Target Start/End: Complemental strand, 23748342 - 23748257
Alignment:
Q  401 ttaagggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggacactatgaaat 486  Q
    ||||||||||||||||||||||||||||| ||||||||||| || || ||| |||||||||||||||| || ||||||||||||||    
T  23748342 ttaagggtgtgtttggatggagggtttaggaggggaagggaggggagggttcacttttcatttttaaactacggacactatgaaat 23748257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 405 - 488
Target Start/End: Complemental strand, 34209707 - 34209624
Alignment:
Q  405 gggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggacactatgaaatat 488  Q
    ||||||||||||||| ||||||||||| |||| |||| ||||||| |||||||||||||||||||||   ||||||||||||||    
T  34209707 gggtgtgtttggatgaagggtttagaatgggaggggagggaagagattacttttcatttttaaattacaaacactatgaaatat 34209624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 400 - 486
Target Start/End: Original strand, 8426875 - 8426961
Alignment:
Q  400 attaagggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggacactatgaaat 486  Q
    ||||| ||||| |||| |||||| |||||| ||||||||||| || || |||||||||| |||||||||||||||||||||||||||    
T  8426875 attaatggtgtatttgaatggagagtttaggaggggaagggaagggagggtttacttttaatttttaaattaaggacactatgaaat 8426961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 404 - 476
Target Start/End: Complemental strand, 36347785 - 36347713
Alignment:
Q  404 agggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggac 476  Q
    ||||||||||||||| |||||||||| ||||||||||| || |||||||||||||| ||||||||||| ||||    
T  36347785 agggtgtgtttggattgagggtttaggaggggaagggaagggagagtttacttttcttttttaaattacggac 36347713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 405 - 480
Target Start/End: Original strand, 36046205 - 36046280
Alignment:
Q  405 gggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggacacta 480  Q
    ||||||||||||||||||||||||| |||||||  || || |||||||| ||||||||||||||||| ||||||||    
T  36046205 gggtgtgtttggatggagggtttaggaggggaaatgaggggagagtttatttttcatttttaaattacggacacta 36046280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 401 - 488
Target Start/End: Original strand, 36347538 - 36347625
Alignment:
Q  401 ttaagggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggacactatgaaatat 488  Q
    ||||||||||||||||||| ||||||||| ||||||||||| |  |||||| |||||||||||||| |||| ||| ||||||| ||||    
T  36347538 ttaagggtgtgtttggatgaagggtttaggaggggaagggaagagagagttcacttttcatttttatattacggatactatgacatat 36347625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 402 - 485
Target Start/End: Complemental strand, 35736433 - 35736350
Alignment:
Q  402 taagggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggacactatgaaa 485  Q
    |||||||||||||||||||||||||||| ||| ||||||| || || | | ||||||| ||||||||||  |||||||||||||    
T  35736433 taagggtgtgtttggatggagggtttaggaggtgaagggaggggagggctcacttttcgtttttaaatttcggacactatgaaa 35736350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 401 - 486
Target Start/End: Complemental strand, 9631807 - 9631722
Alignment:
Q  401 ttaagggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggacactatgaaat 486  Q
    ||||||||||||||||||||||||||||| |||| ||||||    || ||| ||||||| ||||||||||| |||||| |||||||    
T  9631807 ttaagggtgtgtttggatggagggtttaggagggaaagggagaagagggttaacttttcgtttttaaattacggacaccatgaaat 9631722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 401 - 482
Target Start/End: Complemental strand, 17380088 - 17380007
Alignment:
Q  401 ttaagggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggacactatg 482  Q
    |||||||||||||||||| |||||||||| |||||||| || || |  ||||  ||||||||||||||||| ||||||||||    
T  17380088 ttaagggtgtgtttggattgagggtttaggaggggaagtgaggggatggtttgattttcatttttaaattacggacactatg 17380007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 406 - 486
Target Start/End: Complemental strand, 40022615 - 40022535
Alignment:
Q  406 ggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggacactatgaaat 486  Q
    |||||| ||||||||||||||||  ||| ||||||| || || |||||| ||||||||||||||||  |||||||||||||    
T  40022615 ggtgtgcttggatggagggtttaagaggagaagggaggggagggtttacatttcatttttaaattacagacactatgaaat 40022535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 409 - 468
Target Start/End: Complemental strand, 8427110 - 8427051
Alignment:
Q  409 gtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaa 468  Q
    |||||||||| |||||||||| |||| |||||| || |||||||||||||||||||||||    
T  8427110 gtgtttggattgagggtttaggagggaaagggaggggagagtttacttttcatttttaaa 8427051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 402 - 485
Target Start/End: Original strand, 31795767 - 31795850
Alignment:
Q  402 taagggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggacactatgaaa 485  Q
    |||| ||||||||||||||||||||||  ||| ||||||| || ||   ||||||||| ||||||||||| |||||||||||||    
T  31795767 taagagtgtgtttggatggagggtttatgaggtgaagggaggggaggacttacttttcgtttttaaattacggacactatgaaa 31795850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 401 - 482
Target Start/End: Complemental strand, 2241665 - 2241584
Alignment:
Q  401 ttaagggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggacactatg 482  Q
    |||||| |||||||||||| |||||||||  |||||| | | || |||||||| ||||||||||||||||| |||| |||||    
T  2241665 ttaaggatgtgtttggatgaagggtttaggtggggaaagaaggggagagtttatttttcatttttaaattatggacgctatg 2241584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 402 - 471
Target Start/End: Complemental strand, 15224940 - 15224871
Alignment:
Q  402 taagggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaatta 471  Q
    |||||||||||||||||  ||||||||| ||||||||||| || |  ||||||||||| |||||||||||    
T  15224940 taagggtgtgtttggatcaagggtttaggaggggaagggaggggatggtttacttttcttttttaaatta 15224871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 402 - 458
Target Start/End: Original strand, 41778771 - 41778827
Alignment:
Q  402 taagggtgtgtttggatggagggtttagaaggggaagggatggaagagtttactttt 458  Q
    ||||||||||||||||| ||||||||||||||| |||||| || || ||||||||||    
T  41778771 taagggtgtgtttggattgagggtttagaagggaaagggaggggagggtttactttt 41778827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 398 - 469
Target Start/End: Original strand, 35736169 - 35736240
Alignment:
Q  398 acattaagggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaat 469  Q
    ||||| ||||||||||||||| |||||||||| ||||||||||| || || | ||| ||||| |||||||||    
T  35736169 acatttagggtgtgtttggattgagggtttaggaggggaagggaggggaggggttaattttcttttttaaat 35736240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 404 - 486
Target Start/End: Original strand, 19566820 - 19566902
Alignment:
Q  404 agggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggacactatgaaat 486  Q
    |||||||||||||| |||| ||||||||||| ||| ||  | || |||||||| ||| ||||||||||  |||||||||||||    
T  19566820 agggtgtgtttggacggagtgtttagaagggaaagagaatggagggtttacttctcagttttaaattacagacactatgaaat 19566902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 449 - 486
Target Start/End: Original strand, 15224739 - 15224776
Alignment:
Q  449 gtttacttttcatttttaaattaaggacactatgaaat 486  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  15224739 gtttacttttcatttttaaattacggacactatgaaat 15224776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 404 - 477
Target Start/End: Complemental strand, 22356248 - 22356175
Alignment:
Q  404 agggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggaca 477  Q
    ||||||||||||||| |||| ||||| ||||||||||| || || ||| | ||||| ||||||||||| |||||    
T  22356248 agggtgtgtttggattgaggatttaggaggggaagggaggggagggttcatttttcttttttaaattacggaca 22356175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 404 - 471
Target Start/End: Complemental strand, 45257551 - 45257484
Alignment:
Q  404 agggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaatta 471  Q
    |||||||||||||||||||| ||||| | ||||||||| |  |  ||||||||||| |||||||||||    
T  45257551 agggtgtgtttggatggaggttttaggatgggaagggaggagatggtttacttttcttttttaaatta 45257484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 404 - 486
Target Start/End: Complemental strand, 9427230 - 9427148
Alignment:
Q  404 agggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggacactatgaaat 486  Q
    ||||||||||||||| ||||||| || |||| ||   | ||||| ||||  ||||||||||||||||| ||||||||| ||||    
T  9427230 agggtgtgtttggattgagggttcaggagggaaactaacggaagggtttgattttcatttttaaattacggacactataaaat 9427148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 401 - 471
Target Start/End: Original strand, 31061356 - 31061426
Alignment:
Q  401 ttaagggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaatta 471  Q
    |||||||||||||||||| || ||||||| ||||||| |||||| || | | ||||||  |||||||||||    
T  31061356 ttaagggtgtgtttggattgaaggtttaggaggggaaaggatgggagggctcacttttattttttaaatta 31061426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 406 - 476
Target Start/End: Complemental strand, 36046443 - 36046374
Alignment:
Q  406 ggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggac 476  Q
    ||||||||||||| |||||||||  ||||||||||| || || ||||||||||  ||||||||||| ||||    
T  36046443 ggtgtgtttggattgagggtttatgaggggaagggaggggag-gtttacttttgttttttaaattacggac 36046374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 431 - 485
Target Start/End: Original strand, 36566877 - 36566931
Alignment:
Q  431 aggggaagggatggaagagtttacttttcatttttaaattaaggacactatgaaa 485  Q
    |||||||||||||  ||  |||||||||||||||||||||| ||||| |||||||    
T  36566877 aggggaagggatgagaggatttacttttcatttttaaattacggacattatgaaa 36566931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 453 - 486
Target Start/End: Complemental strand, 1583272 - 1583239
Alignment:
Q  453 acttttcatttttaaattaaggacactatgaaat 486  Q
    ||||||||||||||||||| ||||||||||||||    
T  1583272 acttttcatttttaaattacggacactatgaaat 1583239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 441
Target Start/End: Original strand, 17379846 - 17379883
Alignment:
Q  404 agggtgtgtttggatggagggtttagaaggggaaggga 441  Q
    ||||||||||||||| |||||||||| |||||||||||    
T  17379846 agggtgtgtttggattgagggtttaggaggggaaggga 17379883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 406 - 471
Target Start/End: Original strand, 41841684 - 41841749
Alignment:
Q  406 ggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaatta 471  Q
    ||||||||||||| |||| ||||| |||| ||||||||| || ||||  ||||| |||||||||||    
T  41841684 ggtgtgtttggattgaggatttaggagggaaagggatgggagggtttgattttcttttttaaatta 41841749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 402 - 471
Target Start/End: Complemental strand, 42813866 - 42813797
Alignment:
Q  402 taagggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaatta 471  Q
    |||||||||||||||||| ||||||||| |||||||| || || |  | ||| ||||| |||||||||||    
T  42813866 taagggtgtgtttggatgaagggtttaggaggggaagagaggggatggcttatttttcttttttaaatta 42813797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 400 - 488
Target Start/End: Original strand, 16713488 - 16713576
Alignment:
Q  400 attaagggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggacactatgaaatat 488  Q
    ||||| ||||||||| ||| |||||||||  ||||||||||| || | |||| | |||| |||||||||||| | ||| ||| ||||||    
T  16713488 attaaaggtgtgttttgattgagggtttaagaggggaagggaagggatagttcaattttaatttttaaattacgtacaatataaaatat 16713576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 411 - 471
Target Start/End: Complemental strand, 31928286 - 31928226
Alignment:
Q  411 gtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaatta 471  Q
    |||||||| |||||||||| ||||||||||| || || | | |||||| ||||||||||||    
T  31928286 gtttggatcgagggtttaggaggggaagggaagggagggctcacttttaatttttaaatta 31928226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 57; Significance: 1e-23; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 402 - 486
Target Start/End: Original strand, 4833529 - 4833613
Alignment:
Q  402 taagggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggacactatgaaat 486  Q
    ||||||| |||||||||||||||||||| ||||||||||| || || |||||||||||||||||||||||  |||||||||||||    
T  4833529 taagggtatgtttggatggagggtttaggaggggaagggaggggagggtttacttttcatttttaaattacagacactatgaaat 4833613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 400 - 481
Target Start/End: Complemental strand, 47391104 - 47391023
Alignment:
Q  400 attaagggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggacactat 481  Q
    |||||||||||||||||||||||||||||  ||||||||||| || |||||||  ||||||||||||||||| |||||||||    
T  47391104 attaagggtgtgtttggatggagggtttaagaggggaagggaggggagagtttggttttcatttttaaattacggacactat 47391023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 406 - 486
Target Start/End: Original strand, 45940658 - 45940738
Alignment:
Q  406 ggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggacactatgaaat 486  Q
    |||||||||||||||| ||||||||||||||||||| || | ||||||||||| ||||||| |||| ||||||||||||||    
T  45940658 ggtgtgtttggatggaaggtttagaaggggaagggagggcaaagtttactttttatttttatattacggacactatgaaat 45940738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 402 - 486
Target Start/End: Complemental strand, 18231832 - 18231748
Alignment:
Q  402 taagggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggacactatgaaat 486  Q
    ||||||||||||||||||||| |||||| ||||||||||| || ||  ||||||||||||||||||||||   ||||||||||||    
T  18231832 taagggtgtgtttggatggagcgtttaggaggggaagggaggggaggatttacttttcatttttaaattacaaacactatgaaat 18231748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 401 - 476
Target Start/End: Complemental strand, 39856112 - 39856037
Alignment:
Q  401 ttaagggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggac 476  Q
    |||||||||||||||||| |||||||||| ||||||||||| || || ||||||||||| ||||||||||| ||||    
T  39856112 ttaagggtgtgtttggattgagggtttaggaggggaagggaggggagggtttacttttcttttttaaattacggac 39856037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 404 - 486
Target Start/End: Original strand, 40196532 - 40196614
Alignment:
Q  404 agggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggacactatgaaat 486  Q
    |||||||||||||||||||||||| | |||||||||||  | || ||||||||||||||||| ||||| ||||||||| ||||    
T  40196532 agggtgtgtttggatggagggtttgggaggggaagggagaggagggtttacttttcatttttgaattacggacactataaaat 40196614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 401 - 476
Target Start/End: Complemental strand, 13771193 - 13771118
Alignment:
Q  401 ttaagggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggac 476  Q
    |||||||||||||| ||| |||||||||| ||||||||||| |  |||||||||||||| ||||||||||| ||||    
T  13771193 ttaagggtgtgtttagattgagggtttaggaggggaagggaggtgagagtttacttttcgtttttaaattacggac 13771118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 405 - 476
Target Start/End: Complemental strand, 31571713 - 31571642
Alignment:
Q  405 gggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggac 476  Q
    |||||||||||||| |||||||||| |||||||| || || |||||||||||||| ||||||||||| ||||    
T  31571713 gggtgtgtttggattgagggtttaggaggggaagcgaggggagagtttacttttcttttttaaattacggac 31571642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 404 - 487
Target Start/End: Original strand, 48881558 - 48881641
Alignment:
Q  404 agggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggacactatgaaata 487  Q
    |||||||||||||||||||||||||| ||||||||||| || |  | ||||||||| ||||||||||| ||||| ||| |||||    
T  48881558 agggtgtgtttggatggagggtttaggaggggaagggaggggatggcttacttttcttttttaaattacggacattataaaata 48881641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 26 - 120
Target Start/End: Original strand, 12360689 - 12360783
Alignment:
Q  26 atccttgcttcagcttcataagctagagaattcactgtatcttctctttgatgaggtaaaacttcatttagaattttgctaacattgcttgcacc 120  Q
    |||||||| |||||||||||||| ||||| ||||||| |||||| |||||||| |||   |||||||| |||| ||| || ||||||||||||||    
T  12360689 atccttgcctcagcttcataagcaagagagttcactgcatcttccctttgatgtggttgcacttcattcagaagtttacttacattgcttgcacc 12360783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 404 - 486
Target Start/End: Original strand, 41496957 - 41497039
Alignment:
Q  404 agggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggacactatgaaat 486  Q
    |||||||||||||||||||||||||| ||||||||||| || |   ||||||||| |||||||||||| ||||| || |||||    
T  41496957 agggtgtgtttggatggagggtttaggaggggaagggaggggatgatttactttttatttttaaattacggacaataggaaat 41497039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 402 - 471
Target Start/End: Complemental strand, 25887438 - 25887370
Alignment:
Q  402 taagggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaatta 471  Q
    ||||||||||||||| || ||||||||| ||||||||||| || ||||||||| ||||||||||||||||    
T  25887438 taagggtgtgtttgg-tgaagggtttaggaggggaagggaggggagagtttacatttcatttttaaatta 25887370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 398 - 483
Target Start/End: Complemental strand, 41008428 - 41008348
Alignment:
Q  398 acattaagggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggacactatga 483  Q
    ||||| |||||||||||||||| ||||||||| |||||||||     |||||||||| |||||||||||||||| ||| |||||||    
T  41008428 acatttagggtgtgtttggatgcagggtttaggaggggaagg-----aagagtttacatttcatttttaaattacggatactatga 41008348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 404 - 488
Target Start/End: Original strand, 13770948 - 13771032
Alignment:
Q  404 agggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggacactatgaaatat 488  Q
    ||||||||||||||| |||| ||||| ||||||||||| || ||  ||||||| | |||||||||||| ||||||||| ||||||    
T  13770948 agggtgtgtttggattgaggatttaggaggggaagggaggggaggatttacttattatttttaaattacggacactataaaatat 13771032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 404 - 471
Target Start/End: Complemental strand, 33519292 - 33519225
Alignment:
Q  404 agggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaatta 471  Q
    |||||||||||||||||||||||||| ||||||||||| || || | ||||||||| | |||||||||    
T  33519292 agggtgtgtttggatggagggtttaggaggggaagggaggggagggattacttttcttctttaaatta 33519225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 404 - 471
Target Start/End: Original strand, 36267553 - 36267620
Alignment:
Q  404 agggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaatta 471  Q
    |||||||||||||||||||||||||| ||||||||||| || || | ||| ||||| |||||||||||    
T  36267553 agggtgtgtttggatggagggtttaggaggggaagggaggggagggcttagttttcttttttaaatta 36267620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 407 - 486
Target Start/End: Complemental strand, 42306571 - 42306492
Alignment:
Q  407 gtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggacactatgaaat 486  Q
    |||||||||||| |||||||||| |||||||  || || |  ||||| ||||||||||||||||| ||||||||||||||    
T  42306571 gtgtgtttggattgagggtttaggaggggaattgaggggatggtttaattttcatttttaaattacggacactatgaaat 42306492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 401 - 486
Target Start/End: Original strand, 30592250 - 30592335
Alignment:
Q  401 ttaagggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggacactatgaaat 486  Q
    |||||||||| |||||||||||| ||||| |||| |||||| || || | ||||||||| |||||||||||  |||||||| ||||    
T  30592250 ttaagggtgtatttggatggaggatttaggagggaaagggaagggagggcttacttttcttttttaaattacagacactataaaat 30592335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 402 - 471
Target Start/End: Original strand, 37925839 - 37925908
Alignment:
Q  402 taagggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaatta 471  Q
    ||||||||||||||||| |||||||||| ||||||||||| || || ||| ||||||  |||||||||||    
T  37925839 taagggtgtgtttggattgagggtttaggaggggaagggaggggagggttcacttttattttttaaatta 37925908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 398 - 479
Target Start/End: Complemental strand, 43230485 - 43230404
Alignment:
Q  398 acattaagggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggacact 479  Q
    |||||||| ||||||||||||| ||||||||  || |||| | | || ||||||||||||| |||||||||||| |||||||    
T  43230485 acattaagtgtgtgtttggatgtagggtttatgagaggaaagaaggggagagtttactttttatttttaaattacggacact 43230404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 402 - 486
Target Start/End: Original strand, 28074101 - 28074185
Alignment:
Q  402 taagggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggacactatgaaat 486  Q
    ||||||||||||||||| || ||||||| ||||||||||| || |||  | ||||||| ||||||||||| ||||| ||| ||||    
T  28074101 taagggtgtgtttggattgaaggtttaggaggggaagggaggggagaactcacttttcttttttaaattacggacattataaaat 28074185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 407 - 486
Target Start/End: Original strand, 34235010 - 34235089
Alignment:
Q  407 gtgtgtttggatggagggttt-agaaggggaagggatggaagagtttacttttcatttttaaattaaggacactatgaaat 486  Q
    ||||||||||||||||||||| || |||| | | || || ||| |||||||||||||||||||||| ||||||||||||||    
T  34235010 gtgtgtttggatggagggtttgagtaggg-acgagaggggagaatttacttttcatttttaaattacggacactatgaaat 34235089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 446 - 489
Target Start/End: Original strand, 30891036 - 30891079
Alignment:
Q  446 agagtttacttttcatttttaaattaaggacactatgaaatata 489  Q
    |||||||||||||||||||||||||| ||||||||| |||||||    
T  30891036 agagtttacttttcatttttaaattacggacactataaaatata 30891079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 404 - 471
Target Start/End: Original strand, 47390855 - 47390922
Alignment:
Q  404 agggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaatta 471  Q
    ||||||||||||||| ||||| |||| |||||||||||  | || ||||||||||| |||||||||||    
T  47390855 agggtgtgtttggattgaggggttaggaggggaagggagtggagggtttacttttcttttttaaatta 47390922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 401 - 486
Target Start/End: Complemental strand, 10315880 - 10315795
Alignment:
Q  401 ttaagggtgtgtttggatggagggtttagaaggggaaggga-tggaagagtttacttttcatttttaaattaaggacactatgaaat 486  Q
    ||||||| ||||||||||||| ||||||| |||||||||||  ||  || |||| |||||||||||||| || ||||||||||||||    
T  10315880 ttaagggcgtgtttggatggaaggtttaggaggggaagggagagggtga-tttatttttcatttttaaaatacggacactatgaaat 10315795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 401 - 471
Target Start/End: Complemental strand, 48015454 - 48015384
Alignment:
Q  401 ttaagggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaatta 471  Q
    |||||||| ||||||||||||||| |||| |||||||||||    |||| ||||||||| |||||||||||    
T  48015454 ttaagggtttgtttggatggagggattaggaggggaagggagatgagagcttacttttcgtttttaaatta 48015384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 402 - 471
Target Start/End: Complemental strand, 1051744 - 1051675
Alignment:
Q  402 taagggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaatta 471  Q
    ||||||||||||||||| |||||||||| ||||||||||| |  ||  |||| ||||| |||||||||||    
T  1051744 taagggtgtgtttggattgagggtttaggaggggaagggaggagaggatttatttttcttttttaaatta 1051675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 449 - 486
Target Start/End: Original strand, 33655153 - 33655190
Alignment:
Q  449 gtttacttttcatttttaaattaaggacactatgaaat 486  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  33655153 gtttacttttcatttttaaattacggacactatgaaat 33655190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 406 - 471
Target Start/End: Original strand, 37620776 - 37620841
Alignment:
Q  406 ggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaatta 471  Q
    ||||||||||||| |||||||| | ||||||||||| || |||||| |||||| ||||| ||||||    
T  37620776 ggtgtgtttggattgagggtttgggaggggaagggaggggagagttcactttttattttcaaatta 37620841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 398 - 439
Target Start/End: Complemental strand, 48881799 - 48881758
Alignment:
Q  398 acattaagggtgtgtttggatggagggtttagaaggggaagg 439  Q
    ||||||||||||||||||||| |||||||||| |||||||||    
T  48881799 acattaagggtgtgtttggattgagggtttaggaggggaagg 48881758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 407 - 471
Target Start/End: Complemental strand, 33655349 - 33655285
Alignment:
Q  407 gtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaatta 471  Q
    |||||||||||| |||||||||| |||||||| || |  || ||||||||||| |||||||||||    
T  33655349 gtgtgtttggattgagggtttaggaggggaagagaggcgagggtttacttttcttttttaaatta 33655285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 401 - 480
Target Start/End: Original strand, 13425117 - 13425196
Alignment:
Q  401 ttaagggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggacacta 480  Q
    |||||||||||||||||| |||||||||| ||||||||| |  | |  ||||| |||| ||||||||||||  |||||||    
T  13425117 ttaagggtgtgtttggatagagggtttaggaggggaaggaagaggatggtttattttttatttttaaattacagacacta 13425196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 402 - 436
Target Start/End: Complemental strand, 17853106 - 17853072
Alignment:
Q  402 taagggtgtgtttggatggagggtttagaagggga 436  Q
    |||||||||||||||||||||||||||| ||||||    
T  17853106 taagggtgtgtttggatggagggtttaggagggga 17853072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 450 - 488
Target Start/End: Original strand, 24970211 - 24970249
Alignment:
Q  450 tttacttttcatttttaaattaaggacactatgaaatat 488  Q
    |||||||||||||||||||||| ||| ||||||||||||    
T  24970211 tttacttttcatttttaaattacggatactatgaaatat 24970249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 402 - 471
Target Start/End: Original strand, 33519046 - 33519115
Alignment:
Q  402 taagggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaatta 471  Q
    |||||| ||||||||||||||| ||||| ||||||||||| || || | | ||||||  |||||||||||    
T  33519046 taagggagtgtttggatggaggttttaggaggggaagggaggggagggctcacttttattttttaaatta 33519115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 441
Target Start/End: Complemental strand, 36267797 - 36267760
Alignment:
Q  404 agggtgtgtttggatggagggtttagaaggggaaggga 441  Q
    ||||||||||||||| |||||||||| |||||||||||    
T  36267797 agggtgtgtttggattgagggtttaggaggggaaggga 36267760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 410 - 486
Target Start/End: Complemental strand, 37621012 - 37620936
Alignment:
Q  410 tgtttggatggagggttt-agaaggggaagggatggaagagtttacttttcatttttaaattaaggacactatgaaat 486  Q
    |||||||||||||||||| ||||||| |||||| || || |||| |||||| ||||||||||| ||||| ||| ||||    
T  37621012 tgtttggatggagggtttgagaaggg-aagggaggggagggtttgcttttcttttttaaattatggacattataaaat 37620936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 406 - 470
Target Start/End: Original strand, 23029353 - 23029417
Alignment:
Q  406 ggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaatt 470  Q
    ||||||||||||| ||||||||| |   |||| |||  |||||||||| ||||||||||||||||    
T  23029353 ggtgtgtttggattgagggtttaaataaggaaaggaaagaagagtttatttttcatttttaaatt 23029417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 57; Significance: 1e-23; HSPs: 44)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 406 - 486
Target Start/End: Complemental strand, 1658055 - 1657975
Alignment:
Q  406 ggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggacactatgaaat 486  Q
    |||||||||||||||||||||||| ||||||||||| || || ||||||||||||||||||||||| ||||||||| ||||    
T  1658055 ggtgtgtttggatggagggtttaggaggggaagggaggggagggtttacttttcatttttaaattacggacactataaaat 1657975  T

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Target: chr5; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 405 - 486
Target Start/End: Complemental strand, 13634954 - 13634873
Alignment:
Q  405 gggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggacactatgaaat 486  Q
    |||||||||||||| |||||||||| ||||||||||| || || | ||||||||||||||||||||| | ||||||||||||    
T  13634954 gggtgtgtttggattgagggtttaggaggggaagggaggggaggggttacttttcatttttaaattacgaacactatgaaat 13634873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 406 - 486
Target Start/End: Complemental strand, 7544378 - 7544298
Alignment:
Q  406 ggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggacactatgaaat 486  Q
    |||||||||||||||||||||||| ||||||||| | || || ||||  ||||||||||||||||| ||||||||||||||    
T  7544378 ggtgtgtttggatggagggtttaggaggggaaggaaggggagggtttggttttcatttttaaattacggacactatgaaat 7544298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 404 - 488
Target Start/End: Complemental strand, 10476272 - 10476188
Alignment:
Q  404 agggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggacactatgaaatat 488  Q
    |||||||||||||||||||||||||| ||||||||||| || || |||||||| | |||||||||||| |  |||||||||||||    
T  10476272 agggtgtgtttggatggagggtttaggaggggaagggaggggagtgtttacttataatttttaaattacgaccactatgaaatat 10476188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 402 - 486
Target Start/End: Original strand, 14245086 - 14245170
Alignment:
Q  402 taagggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggacactatgaaat 486  Q
    ||||||||||||||||| |||||||||| ||||||||||| || ||  |||||||||| ||||||||||| ||||||| ||||||    
T  14245086 taagggtgtgtttggattgagggtttaggaggggaagggaggggaggatttacttttcttttttaaattacggacactgtgaaat 14245170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 401 - 488
Target Start/End: Original strand, 8502832 - 8502919
Alignment:
Q  401 ttaagggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggacactatgaaatat 488  Q
    ||||||||||||||||||||| ||||||  | ||||| |||||| || ||| ||||||||||||||||||| ||||| ||||||||||    
T  8502832 ttaagggtgtgtttggatggatggtttatgaagggaatggatgggagggttcacttttcatttttaaattacggacattatgaaatat 8502919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 404 - 486
Target Start/End: Complemental strand, 14245290 - 14245208
Alignment:
Q  404 agggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggacactatgaaat 486  Q
    ||||||||||||||| |||||||||| ||||||||||| || || ||||  ||||||||||||||||| ||||||| ||||||    
T  14245290 agggtgtgtttggattgagggtttaggaggggaagggaggggagggtttgtttttcatttttaaattacggacactgtgaaat 14245208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 401 - 486
Target Start/End: Complemental strand, 16938726 - 16938641
Alignment:
Q  401 ttaagggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggacactatgaaat 486  Q
    ||||||||||||||||||||||||||||| || |||| ||| || || |||||  ||||||||||||||||  |||||||||||||    
T  16938726 ttaagggtgtgtttggatggagggtttaggagaggaatggaggggagggtttagatttcatttttaaattactgacactatgaaat 16938641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 406 - 486
Target Start/End: Complemental strand, 26415136 - 26415055
Alignment:
Q  406 ggtgtgtttggatggagggttta-gaaggggaagggatggaagagtttacttttcatttttaaattaaggacactatgaaat 486  Q
    ||||||||||||||||||||||| || |||||| ||| || |||||||||||||||||||||| |||  |||||||||||||    
T  26415136 ggtgtgtttggatggagggtttatgagggggaaaggaggggagagtttacttttcatttttaagttacagacactatgaaat 26415055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 409 - 486
Target Start/End: Complemental strand, 36363271 - 36363194
Alignment:
Q  409 gtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggacactatgaaat 486  Q
    ||||||||||||||||||||| ||||||||||| |  |||||| ||||||||||||||||||| ||| ||||| ||||    
T  36363271 gtgtttggatggagggtttaggaggggaagggaggagagagttcacttttcatttttaaattacggatactataaaat 36363194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 407 - 486
Target Start/End: Original strand, 9798615 - 9798694
Alignment:
Q  407 gtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggacactatgaaat 486  Q
    ||||||||||||||||| ||||| |||  ||||||||  |||||||||||||||||||||||||| ||| |||| |||||    
T  9798615 gtgtgtttggatggaggatttaggaggaaaagggatgtgagagtttacttttcatttttaaattacggatactacgaaat 9798694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 402 - 469
Target Start/End: Original strand, 13634709 - 13634776
Alignment:
Q  402 taagggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaat 469  Q
    ||||||||||||||||| |||||||||| ||||||||||| || || ||||||||||| |||||||||    
T  13634709 taagggtgtgtttggattgagggtttaggaggggaagggaggggagggtttacttttcttttttaaat 13634776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 407 - 481
Target Start/End: Complemental strand, 11757144 - 11757070
Alignment:
Q  407 gtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggacactat 481  Q
    ||||||||||||||||||||||  ||||||||||| || || |||||  |||||||||||||||| |||||||||    
T  11757144 gtgtgtttggatggagggtttaagaggggaagggaggggagggtttagatttcatttttaaattacggacactat 11757070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 397 - 471
Target Start/End: Complemental strand, 20147121 - 20147052
Alignment:
Q  397 tacattaagggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaatta 471  Q
    |||||||||||||||||||||| |||||||||| ||||||||||     || |||||||||||||||||||||||    
T  20147121 tacattaagggtgtgtttggattgagggtttaggaggggaaggg-----agggtttacttttcatttttaaatta 20147052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 402 - 476
Target Start/End: Original strand, 26414891 - 26414965
Alignment:
Q  402 taagggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggac 476  Q
    ||||||||||||||||| |||||||||| ||| ||||||| || || ||||||||||| ||||||||||| ||||    
T  26414891 taagggtgtgtttggattgagggtttaggaggagaagggaggggagggtttacttttcgtttttaaattacggac 26414965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 401 - 468
Target Start/End: Original strand, 10476023 - 10476090
Alignment:
Q  401 ttaagggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaa 468  Q
    ||||||||||||||| || |||||||||| |||||||||||||  || ||||||||||| ||||||||    
T  10476023 ttaagggtgtgtttgaattgagggtttaggaggggaagggatgagagggtttacttttcttttttaaa 10476090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 398 - 486
Target Start/End: Original strand, 10650421 - 10650511
Alignment:
Q  398 acattaagggtgtgtttggatggagggtttagaaggggaa--gggatggaagagtttacttttcatttttaaattaaggacactatgaaat 486  Q
    ||||||| |||| ||||||||||||| ||||| |||||||  |||| || ||  ||||||||| |||||||||||| ||||||||||||||    
T  10650421 acattaatggtgcgtttggatggaggatttaggaggggaaaagggaggggaggatttactttttatttttaaattacggacactatgaaat 10650511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 400 - 486
Target Start/End: Original strand, 11419188 - 11419274
Alignment:
Q  400 attaagggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggacactatgaaat 486  Q
    |||||||||||||||  ||||||||||||  | |||||| ||  | ||||||||||||||||||| |||||||||||| ||| ||||    
T  11419188 attaagggtgtgtttacatggagggtttatgaagggaagagagaggagagtttacttttcattttcaaattaaggacaatataaaat 11419274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 404 - 486
Target Start/End: Original strand, 33744193 - 33744275
Alignment:
Q  404 agggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggacactatgaaat 486  Q
    ||||||||||||||||||||||| ||  || ||||||| || || ||||||||||| ||||||||||| ||||| ||| ||||    
T  33744193 agggtgtgtttggatggagggttaaggcggagaagggaggggagggtttacttttcttttttaaattatggacattataaaat 33744275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 406 - 471
Target Start/End: Original strand, 34980812 - 34980877
Alignment:
Q  406 ggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaatta 471  Q
    ||||||||||||| || ||||||| ||||||||||| ||||| ||| |||||| ||||||||||||    
T  34980812 ggtgtgtttggattgaaggtttaggaggggaagggagggaagggttcacttttaatttttaaatta 34980877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 408 - 467
Target Start/End: Complemental strand, 2550592 - 2550533
Alignment:
Q  408 tgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaa 467  Q
    ||||||||||| |||||||||| ||||||||||| || || ||||||||||| |||||||    
T  2550592 tgtgtttggattgagggtttaggaggggaagggaggggagggtttacttttcttttttaa 2550533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 404 - 486
Target Start/End: Original strand, 28279476 - 28279558
Alignment:
Q  404 agggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggacactatgaaat 486  Q
    |||||||||||||||||||||||| | | ||||| ||  |  | | |||||||||||||||||||||| ||||| ||||||||    
T  28279476 agggtgtgtttggatggagggtttgggatgggaaagggggtgaaaatttacttttcatttttaaattatggacattatgaaat 28279558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 402 - 471
Target Start/End: Complemental strand, 28279723 - 28279654
Alignment:
Q  402 taagggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaatta 471  Q
    ||||||||||||||||| ||| || || |||||||||||| |  || ||||||||||| |||||||||||    
T  28279723 taagggtgtgtttggattgagagtctataaggggaagggaggagagggtttacttttcctttttaaatta 28279654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 404 - 441
Target Start/End: Original strand, 40305670 - 40305707
Alignment:
Q  404 agggtgtgtttggatggagggtttagaaggggaaggga 441  Q
    |||||||||||||||||||||||||| |||||||||||    
T  40305670 agggtgtgtttggatggagggtttaggaggggaaggga 40305707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 398 - 486
Target Start/End: Complemental strand, 10650664 - 10650576
Alignment:
Q  398 acattaagggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggacactatgaaat 486  Q
    ||||| ||||||||||||||| ||  |||| | ||||||||||| |  | |||||||||||  ||||||||||| ||| ||||||||||    
T  10650664 acatttagggtgtgtttggattgaaagtttgggaggggaagggaggagaaagtttactttttgtttttaaattacggatactatgaaat 10650576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 401 - 477
Target Start/End: Original strand, 11436936 - 11437012
Alignment:
Q  401 ttaagggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggaca 477  Q
    ||||||| |||||||||| |||||||||| |||||||||||  | || | ||||||| | ||||||||||| |||||    
T  11436936 ttaagggcgtgtttggattgagggtttaggaggggaagggagaggagggcttactttccttttttaaattacggaca 11437012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 404 - 476
Target Start/End: Original strand, 16938479 - 16938551
Alignment:
Q  404 agggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggac 476  Q
    ||||||||||||||| |||||||||| ||||||||||| || || ||||  ||||| ||||||| ||| ||||    
T  16938479 agggtgtgtttggattgagggtttaggaggggaagggaggggagggtttgtttttcttttttaagttacggac 16938551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 404 - 468
Target Start/End: Complemental strand, 37551649 - 37551585
Alignment:
Q  404 agggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaa 468  Q
    |||||||||||||||||||||||||  |||| ||||||  | |  ||||||||||||||||||||    
T  37551649 agggtgtgtttggatggagggtttacgagggaaagggagaggatggtttacttttcatttttaaa 37551585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 404 - 468
Target Start/End: Complemental strand, 37654479 - 37654415
Alignment:
Q  404 agggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaa 468  Q
    |||||||||||||||||||||||||  |||| ||||||  | |  ||||||||||||||||||||    
T  37654479 agggtgtgtttggatggagggtttacgagggaaagggagaggatggtttacttttcatttttaaa 37654415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 402 - 441
Target Start/End: Original strand, 10204574 - 10204613
Alignment:
Q  402 taagggtgtgtttggatggagggtttagaaggggaaggga 441  Q
    ||||||||||||||||| |||||||||| |||||||||||    
T  10204574 taagggtgtgtttggatcgagggtttaggaggggaaggga 10204613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 409 - 468
Target Start/End: Original strand, 36363037 - 36363096
Alignment:
Q  409 gtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaa 468  Q
    |||||||||| |||||||||||||||||| ||| || |||||||| ||||| | ||||||    
T  36363037 gtgtttggattgagggtttagaaggggaatggaggggagagtttaattttcttgtttaaa 36363096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 446 - 488
Target Start/End: Original strand, 4373608 - 4373650
Alignment:
Q  446 agagtttacttttcatttttaaattaaggacactatgaaatat 488  Q
    ||||||||||||| |||||||||||| ||||||| ||||||||    
T  4373608 agagtttacttttaatttttaaattacggacactgtgaaatat 4373650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 402 - 476
Target Start/End: Original strand, 7544134 - 7544208
Alignment:
Q  402 taagggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggac 476  Q
    ||||||||||||||||| |||||||||| | ||||||||| || || | | | ||||| ||||||||||| ||||    
T  7544134 taagggtgtgtttggattgagggtttaggaagggaagggaggggagggctaaattttcttttttaaattacggac 7544208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 398 - 428
Target Start/End: Original strand, 10072651 - 10072681
Alignment:
Q  398 acattaagggtgtgtttggatggagggttta 428  Q
    |||||||||||||||||||||||||||||||    
T  10072651 acattaagggtgtgtttggatggagggttta 10072681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 407 - 441
Target Start/End: Complemental strand, 21581188 - 21581154
Alignment:
Q  407 gtgtgtttggatggagggtttagaaggggaaggga 441  Q
    ||||||||||||||||||||||| |||||||||||    
T  21581188 gtgtgtttggatggagggtttaggaggggaaggga 21581154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 404 - 486
Target Start/End: Complemental strand, 34981054 - 34980972
Alignment:
Q  404 agggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggacactatgaaat 486  Q
    |||||||||||  ||||||||||||  ||||||||||| || ||   ||||||||| ||||||||||| ||||| ||| ||||    
T  34981054 agggtgtgttttaatggagggtttaagaggggaagggaggggaggacttacttttcttttttaaattatggacattataaaat 34980972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 441
Target Start/End: Complemental strand, 5688634 - 5688597
Alignment:
Q  404 agggtgtgtttggatggagggtttagaaggggaaggga 441  Q
    ||||||||||||||| |||||||||| |||||||||||    
T  5688634 agggtgtgtttggattgagggtttaggaggggaaggga 5688597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 441
Target Start/End: Complemental strand, 11437186 - 11437149
Alignment:
Q  404 agggtgtgtttggatggagggtttagaaggggaaggga 441  Q
    ||||||| ||||||| ||||||||||||||||||||||    
T  11437186 agggtgtttttggattgagggtttagaaggggaaggga 11437149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 402 - 439
Target Start/End: Complemental strand, 15986870 - 15986833
Alignment:
Q  402 taagggtgtgtttggatggagggtttagaaggggaagg 439  Q
    ||||||||||||||||| |||||||||| |||||||||    
T  15986870 taagggtgtgtttggattgagggtttaggaggggaagg 15986833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 449 - 486
Target Start/End: Original strand, 36392195 - 36392232
Alignment:
Q  449 gtttacttttcatttttaaattaaggacactatgaaat 486  Q
    |||||||||||||||||||||||  |||||||||||||    
T  36392195 gtttacttttcatttttaaattacagacactatgaaat 36392232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 402 - 471
Target Start/End: Original strand, 40815295 - 40815364
Alignment:
Q  402 taagggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaatta 471  Q
    ||||||||||||||||| || | ||||| ||||||||||| |  ||  |||||||||| |||||||||||    
T  40815295 taagggtgtgtttggattgaagatttaggaggggaagggaagagaggatttacttttcttttttaaatta 40815364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 401 - 441
Target Start/End: Original strand, 12035933 - 12035973
Alignment:
Q  401 ttaagggtgtgtttggatggagggtttagaaggggaaggga 441  Q
    |||||||||||||||||| || ||||||| |||||||||||    
T  12035933 ttaagggtgtgtttggatagatggtttaggaggggaaggga 12035973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 403 - 471
Target Start/End: Complemental strand, 20513682 - 20513614
Alignment:
Q  403 aagggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaatta 471  Q
    |||||||||||||||| |||||||||| | | |||  || |||||  |||||||||| |||||||||||    
T  20513682 aagggtgtgtttggattgagggtttaggaagcgaaaagaaggaaggatttacttttcttttttaaatta 20513614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 404 - 436
Target Start/End: Complemental strand, 22023603 - 22023571
Alignment:
Q  404 agggtgtgtttggatggagggtttagaagggga 436  Q
    |||||||||||||||||||||||||| ||||||    
T  22023603 agggtgtgtttggatggagggtttaggagggga 22023571  T

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Target: chr8 (Bit Score: 54; Significance: 9e-22; HSPs: 43)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 401 - 486
Target Start/End: Original strand, 31543069 - 31543154
Alignment:
Q  401 ttaagggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggacactatgaaat 486  Q
    |||||||| |||||||||||||||||||  ||||||||||| || || ||||||||||||||||||||||| ||| ||||||||||    
T  31543069 ttaagggtatgtttggatggagggtttaagaggggaagggaggggagggtttacttttcatttttaaattacggaaactatgaaat 31543154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 400 - 488
Target Start/End: Complemental strand, 34634391 - 34634303
Alignment:
Q  400 attaagggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggacactatgaaatat 488  Q
    ||||||||||||||||||||||| |||||| |||||||||||||  || ||| | |||| |||||||||||| ||||||||||||||||    
T  34634391 attaagggtgtgtttggatggagagtttaggaggggaagggatgtgagggttcattttttatttttaaattacggacactatgaaatat 34634303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 404 - 486
Target Start/End: Complemental strand, 43732931 - 43732849
Alignment:
Q  404 agggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggacactatgaaat 486  Q
    |||||||||||||||||||||||||| ||||||||||| || || ||||||||||| ||||||||||| ||||| ||| ||||    
T  43732931 agggtgtgtttggatggagggtttaggaggggaagggaggggagggtttacttttcttttttaaattacggacattataaaat 43732849  T

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Target: chr8; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 404 - 488
Target Start/End: Complemental strand, 11785770 - 11785686
Alignment:
Q  404 agggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggacactatgaaatat 488  Q
    |||||||||||||||||||||||||| |||| ||| || || || ||||  ||||||||||||||||| ||||| ||||||||||    
T  11785770 agggtgtgtttggatggagggtttaggagggtaagagaagggagggtttgattttcatttttaaattacggacattatgaaatat 11785686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 402 - 486
Target Start/End: Complemental strand, 16024399 - 16024316
Alignment:
Q  402 taagggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggacactatgaaat 486  Q
    |||| ||||||||||||||||| ||||| ||||||||||| || |||||||||||||| ||||||||||| ||||| ||| ||||    
T  16024399 taagagtgtgtttggatggaggatttaggaggggaagggaggggagagtttacttttc-tttttaaattacggacattataaaat 16024316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 404 - 488
Target Start/End: Complemental strand, 31738667 - 31738583
Alignment:
Q  404 agggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggacactatgaaatat 488  Q
    |||||||||||||||||||||||||| ||||||||  | || || |||||  |||||||||||||||| ||||||||| ||||||    
T  31738667 agggtgtgtttggatggagggtttaggaggggaagaaaggggagggtttaaatttcatttttaaattacggacactataaaatat 31738583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 410 - 489
Target Start/End: Complemental strand, 36309081 - 36309002
Alignment:
Q  410 tgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggacactatgaaatata 489  Q
    |||||||||||||||||||| ||||||||||| || || ||||||||||||| ||||||||| | ||| | |||||||||    
T  36309081 tgtttggatggagggtttaggaggggaagggaggggagggtttacttttcatctttaaattacgtacattgtgaaatata 36309002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 404 - 478
Target Start/End: Original strand, 3726863 - 3726937
Alignment:
Q  404 agggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggacac 478  Q
    |||||||||||||||||||||||||| |||||||||||  | |  ||||| ||||||||||||||||| ||||||    
T  3726863 agggtgtgtttggatggagggtttaggaggggaagggaaaggacggtttatttttcatttttaaattacggacac 3726937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 408 - 486
Target Start/End: Original strand, 30479721 - 30479799
Alignment:
Q  408 tgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggacactatgaaat 486  Q
    |||||||||||||||| ||||| ||||| | ||| || |||||| |||||||||||||||||||  |||||||||||||    
T  30479721 tgtgtttggatggaggatttaggagggggatggaggggagagttcacttttcatttttaaattacagacactatgaaat 30479799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 398 - 476
Target Start/End: Complemental strand, 31543322 - 31543244
Alignment:
Q  398 acattaagggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggac 476  Q
    ||||| ||||||||||| ||| |||||||||| ||||||||||| || || ||||||||||| ||||||||||| ||||    
T  31543322 acatttagggtgtgtttcgattgagggtttaggaggggaagggaggggagggtttacttttcttttttaaattatggac 31543244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 401 - 486
Target Start/End: Complemental strand, 30365377 - 30365292
Alignment:
Q  401 ttaagggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggacactatgaaat 486  Q
    ||||||||||||||||||||||| |||||||||| |||||| || || | || |||||| |||||||||||  |||| ||||||||    
T  30365377 ttaagggtgtgtttggatggaggatttagaagggtaagggaggggagggcttccttttcttttttaaattacagacattatgaaat 30365292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 408 - 476
Target Start/End: Original strand, 7979144 - 7979212
Alignment:
Q  408 tgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggac 476  Q
    ||||||||||| ||||||||||||| ||||||||  | |||||||||||||| ||||||||||| ||||    
T  7979144 tgtgtttggattgagggtttagaagaggaagggagaggagagtttacttttcttttttaaattacggac 7979212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 404 - 471
Target Start/End: Complemental strand, 9718723 - 9718656
Alignment:
Q  404 agggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaatta 471  Q
    ||||||||||||||| |||||||||| ||| ||||||| || | |||||||||||| |||||||||||    
T  9718723 agggtgtgtttggattgagggtttaggaggagaagggaggggaaagtttacttttcttttttaaatta 9718656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 397 - 488
Target Start/End: Complemental strand, 10028374 - 10028283
Alignment:
Q  397 tacattaagggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggacactatgaaatat 488  Q
    |||||| ||| ||||||||||  |||||||||| || ||||| || || || |||||||||| | |||||||||| ||||||||||||||||    
T  10028374 tacatttaggatgtgtttggacagagggtttaggagaggaagtgaggggagggtttactttttacttttaaattacggacactatgaaatat 10028283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 402 - 476
Target Start/End: Complemental strand, 1027094 - 1027020
Alignment:
Q  402 taagggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggac 476  Q
    |||||||||||||||||  ||||||||| | ||||||||| ||||| ||| ||||||| ||||||||||| ||||    
T  1027094 taagggtgtgtttggattaagggtttaggaagggaagggagggaagggttcacttttcttttttaaattacggac 1027020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 410 - 476
Target Start/End: Original strand, 1281149 - 1281215
Alignment:
Q  410 tgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggac 476  Q
    ||||||||| |||||||||| |||||||||||||  || ||||||||||| ||||||||||| ||||    
T  1281149 tgtttggattgagggtttaggaggggaagggatgagagggtttacttttcttttttaaattacggac 1281215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 401 - 471
Target Start/End: Complemental strand, 8815388 - 8815318
Alignment:
Q  401 ttaagggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaatta 471  Q
    |||||||||||||||||| |||||||||| ||||| ||||| || || ||| |||||| ||||||||||||    
T  8815388 ttaagggtgtgtttggattgagggtttaggagggggagggaggggagggttcacttttaatttttaaatta 8815318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 412 - 486
Target Start/End: Original strand, 11575415 - 11575488
Alignment:
Q  412 tttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggacactatgaaat 486  Q
    |||||||||||| ||||| || |||||||| ||| | |||||||||||||| |||||||||||| ||||||||||    
T  11575415 tttggatggaggatttaggagaggaagggagggagg-gtttacttttcattcttaaattaaggatactatgaaat 11575488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 402 - 485
Target Start/End: Original strand, 41103502 - 41103587
Alignment:
Q  402 taagggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcattttt--aaattaaggacactatgaaa 485  Q
    |||||||||||||||||||||||||||| |||||||| || || || ||||  ||||| |||||  |||||| |||||||||||||    
T  41103502 taagggtgtgtttggatggagggtttaggaggggaagagaggggagggtttgattttcgtttttaaaaattatggacactatgaaa 41103587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 404 - 469
Target Start/End: Original strand, 13404976 - 13405041
Alignment:
Q  404 agggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaat 469  Q
    |||||||| |||||| |||||||||| |||||||||||||| |||  ||||||||| |||||||||    
T  13404976 agggtgtggttggattgagggtttaggaggggaagggatgggagaaattacttttcttttttaaat 13405041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 404 - 471
Target Start/End: Original strand, 12022142 - 12022210
Alignment:
Q  404 agggtgtgtttggatggagggttt-agaaggggaagggatggaagagtttacttttcatttttaaatta 471  Q
    |||||||||| ||||||||||||| |||||||||||||| || || | ||||||||| |||||||||||    
T  12022142 agggtgtgttaggatggagggtttgagaaggggaagggaggggagggcttacttttcttttttaaatta 12022210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 407 - 486
Target Start/End: Complemental strand, 16653190 - 16653111
Alignment:
Q  407 gtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggacactatgaaat 486  Q
    ||||||||||||| | ||||||  ||||||||||| |  || ||||| ||||||||||||||||| ||||| ||||||||    
T  16653190 gtgtgtttggatgaatggtttaagaggggaagggaggagagggtttaattttcatttttaaattacggacattatgaaat 16653111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 404 - 471
Target Start/End: Original strand, 30365130 - 30365197
Alignment:
Q  404 agggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaatta 471  Q
    ||||||||||||||| |||||||||| ||| ||| ||| || |||||| |||||| ||||||||||||    
T  30365130 agggtgtgtttggattgagggtttaggaggagaaaggaggggagagttcacttttaatttttaaatta 30365197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 404 - 469
Target Start/End: Original strand, 11033419 - 11033482
Alignment:
Q  404 agggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaat 469  Q
    ||||||||||||||| ||||||||||||| |||||||| ||  | ||||||||||| |||||||||    
T  11033419 agggtgtgtttggattgagggtttagaagaggaagggaggg--gggtttacttttcttttttaaat 11033482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 398 - 471
Target Start/End: Complemental strand, 9434549 - 9434477
Alignment:
Q  398 acattaagggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaatta 471  Q
    ||||||||||||||||||||| |||||||||  | |||||  |||||||||||| ||||||  |||||||||||    
T  9434549 acattaagggtgtgtttggattgagggtttacga-gggaatagatggaagagttcacttttattttttaaatta 9434477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 449 - 488
Target Start/End: Original strand, 1026894 - 1026933
Alignment:
Q  449 gtttacttttcatttttaaattaaggacactatgaaatat 488  Q
    ||||||||||||||||||||||  ||||||||||||||||    
T  1026894 gtttacttttcatttttaaattgcggacactatgaaatat 1026933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 404 - 471
Target Start/End: Original strand, 2248452 - 2248519
Alignment:
Q  404 agggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaatta 471  Q
    ||||||||||||||| ||| |||||| ||||||||||| || |||||| | ||| | |||||||||||    
T  2248452 agggtgtgtttggattgagagtttaggaggggaagggaggggagagttcaatttccttttttaaatta 2248519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 404 - 471
Target Start/End: Complemental strand, 7503198 - 7503131
Alignment:
Q  404 agggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaatta 471  Q
    ||||||||||||||| |||| ||| | |||||| |||| || || ||||||||||| |||||||||||    
T  7503198 agggtgtgtttggattgaggctttgggaggggaggggaggggagggtttacttttcgtttttaaatta 7503131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 404 - 486
Target Start/End: Original strand, 8815141 - 8815223
Alignment:
Q  404 agggtgtgtttggatggagggtttagaaggggaagggatg-gaagagtttacttttcatttttaaattaaggacactatgaaat 486  Q
    |||||||||||||||||||||||||| |||||||| || | || ||  ||||||||| ||||||||||| ||||| ||| ||||    
T  8815141 agggtgtgtttggatggagggtttaggaggggaagagaggtgatga-cttacttttcttttttaaattacggacattataaaat 8815223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 401 - 436
Target Start/End: Original strand, 9718486 - 9718521
Alignment:
Q  401 ttaagggtgtgtttggatggagggtttagaagggga 436  Q
    ||||||||||||||||||||||||||||| ||||||    
T  9718486 ttaagggtgtgtttggatggagggtttaggagggga 9718521  T

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Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 408 - 471
Target Start/End: Complemental strand, 11575646 - 11575583
Alignment:
Q  408 tgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaatta 471  Q
    |||||||||||  ||||||||| | | ||||||| || || |||||||||||||||||||||||    
T  11575646 tgtgtttggattcagggtttaggatgagaagggaggggagggtttacttttcatttttaaatta 11575583  T

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Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 402 - 477
Target Start/End: Complemental strand, 12022389 - 12022314
Alignment:
Q  402 taagggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggaca 477  Q
    ||||||||||||||||| |||||||||| ||||||| ||| || || | | ||||||  ||||||||||| |||||    
T  12022389 taagggtgtgtttggattgagggtttaggaggggaaaggaggggagggctcacttttattttttaaattacggaca 12022314  T

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Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 402 - 441
Target Start/End: Original strand, 43732677 - 43732716
Alignment:
Q  402 taagggtgtgtttggatggagggtttagaaggggaaggga 441  Q
    ||||||||||||||||| |||||||||| |||||||||||    
T  43732677 taagggtgtgtttggattgagggtttaggaggggaaggga 43732716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 450 - 488
Target Start/End: Complemental strand, 1281341 - 1281303
Alignment:
Q  450 tttacttttcatttttaaattaaggacactatgaaatat 488  Q
    |||| ||||||||||||||||| ||||||||||||||||    
T  1281341 tttagttttcatttttaaattacggacactatgaaatat 1281303  T

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Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 434 - 488
Target Start/End: Complemental strand, 2248666 - 2248612
Alignment:
Q  434 ggaagggatggaagagtttacttttcatttttaaattaaggacactatgaaatat 488  Q
    |||||||| || || ||| |||||| |||||||||||| ||||||||||||||||    
T  2248666 ggaagggaggggagggttcactttttatttttaaattacggacactatgaaatat 2248612  T

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Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 402 - 476
Target Start/End: Original strand, 10028108 - 10028182
Alignment:
Q  402 taagggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggac 476  Q
    ||||| ||||||||||| |||||||||| ||||||  ||| |  ||| |||||||||| ||||||||||| ||||    
T  10028108 taaggatgtgtttggatcgagggtttaggaggggataggaggtgagattttacttttcttttttaaattacggac 10028182  T

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Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 448 - 486
Target Start/End: Original strand, 37923122 - 37923160
Alignment:
Q  448 agtttacttttcatttttaaattaaggacactatgaaat 486  Q
    |||||||||||||||||||||||| | ||||||||||||    
T  37923122 agtttacttttcatttttaaattatgaacactatgaaat 37923160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 441
Target Start/End: Complemental strand, 2482017 - 2481980
Alignment:
Q  404 agggtgtgtttggatggagggtttagaaggggaaggga 441  Q
    ||||| |||||||||||||||||||| |||||||||||    
T  2482017 agggtatgtttggatggagggtttaggaggggaaggga 2481980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 400 - 477
Target Start/End: Complemental strand, 13405228 - 13405151
Alignment:
Q  400 attaagggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggaca 477  Q
    |||||||||||| ||| ||| ||||||||| |   |||| |||| || | |||||||||||||||||||||| |||||    
T  13405228 attaagggtgtgcttgaatgaagggtttaggaaaagaagagatgaaaaaatttacttttcatttttaaattacggaca 13405151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 407 - 471
Target Start/End: Complemental strand, 37923320 - 37923255
Alignment:
Q  407 gtgtgtttggatggagggtttagaag-gggaagggatggaagagtttacttttcatttttaaatta 471  Q
    ||||||||||||  ||||||||| || ||||||||||||||| ||||| | || ||||||||||||    
T  37923320 gtgtgtttggattaagggtttaggagagggaagggatggaagggtttaatatttatttttaaatta 37923255  T

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Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 441
Target Start/End: Original strand, 40632996 - 40633033
Alignment:
Q  404 agggtgtgtttggatggagggtttagaaggggaaggga 441  Q
    |||||||||||| ||||||||||||| |||||||||||    
T  40632996 agggtgtgtttgaatggagggtttaggaggggaaggga 40633033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 403 - 471
Target Start/End: Complemental strand, 7394706 - 7394638
Alignment:
Q  403 aagggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaatta 471  Q
    |||| ||||||||||| |||||||||| ||||||||||| || |  ||| ||||||  |||||||||||    
T  7394706 aaggatgtgtttggattgagggtttaggaggggaagggaggggatggttcacttttattttttaaatta 7394638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 404 - 440
Target Start/End: Complemental strand, 34196551 - 34196515
Alignment:
Q  404 agggtgtgtttggatggagggtttagaaggggaaggg 440  Q
    |||||| ||||||||||||||||||| ||||||||||    
T  34196551 agggtgcgtttggatggagggtttaggaggggaaggg 34196515  T

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Target: scaffold0067 (Bit Score: 51; Significance: 6e-20; HSPs: 2)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 398 - 476
Target Start/End: Complemental strand, 39440 - 39362
Alignment:
Q  398 acattaagggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggac 476  Q
    ||||||||||||||||||||| ||||||||||||||| |||||| || || ||||||||||| ||||||||||| ||||    
T  39440 acattaagggtgtgtttggattgagggtttagaagggaaagggaggggagggtttacttttcttttttaaattacggac 39362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 404 - 486
Target Start/End: Original strand, 39186 - 39269
Alignment:
Q  404 agggtgtgtttggatggagggtttagaaggggaagggatgga-agagtttacttttcatttttaaattaaggacactatgaaat 486  Q
    |||||||||||||||||||||||||| |||||||  || ||  || ||||||||||||||||||||||| ||||||||||||||    
T  39186 agggtgtgtttggatggagggtttaggaggggaaatgagggggagggtttacttttcatttttaaattacggacactatgaaat 39269  T

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Target: scaffold0262 (Bit Score: 49; Significance: 9e-19; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 402 - 486
Target Start/End: Original strand, 16294 - 16378
Alignment:
Q  402 taagggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggacactatgaaat 486  Q
    ||||||| |||||||||||||||||||| |||| || ||| || || ||||||||||||||||||||||| | ||||||||||||    
T  16294 taagggtttgtttggatggagggtttaggagggaaaaggaggggagggtttacttttcatttttaaattatgaacactatgaaat 16378  T

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Target: scaffold0198 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 407 - 486
Target Start/End: Original strand, 3150 - 3229
Alignment:
Q  407 gtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggacactatgaaat 486  Q
    |||||||||||| ||| |||||| ||||||||||| || |||||||||||||| |||||||||||  |||||||||||||    
T  3150 gtgtgtttggattgagagtttaggaggggaagggaggggagagtttacttttcttttttaaattacagacactatgaaat 3229  T

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Target: scaffold0007 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 408 - 486
Target Start/End: Complemental strand, 242456 - 242378
Alignment:
Q  408 tgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggacactatgaaat 486  Q
    |||||||||||||| |||||| |||||||||||| || || ||||||||||| ||||||||||| ||||| ||| ||||    
T  242456 tgtgtttggatggatggtttataaggggaagggaggggagggtttacttttcttttttaaattacggacattataaaat 242378  T

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Target: scaffold0026 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 407 - 476
Target Start/End: Original strand, 1175 - 1244
Alignment:
Q  407 gtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggac 476  Q
    |||||||||||| |||||||||| |||||||| || || |||||||||||||| ||||||||||| ||||    
T  1175 gtgtgtttggattgagggtttaggaggggaagagaggggagagtttacttttcttttttaaattacggac 1244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 449 - 486
Target Start/End: Complemental strand, 1371 - 1334
Alignment:
Q  449 gtttacttttcatttttaaattaaggacactatgaaat 486  Q
    ||||||||||||||||||||||| | ||||||||||||    
T  1371 gtttacttttcatttttaaattatgaacactatgaaat 1334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 402 - 486
Target Start/End: Complemental strand, 16196 - 16112
Alignment:
Q  402 taagggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggacactatgaaat 486  Q
    ||||| ||||||| ||| |||| ||||| ||||||||||| | ||||||||| ||||||||||||||||| ||| | ||||||||    
T  16196 taaggttgtgtttcgatagaggatttaggaggggaagggaggaaagagtttatttttcatttttaaattacggatattatgaaat 16112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 402 - 471
Target Start/End: Complemental strand, 17784 - 17717
Alignment:
Q  402 taagggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaatta 471  Q
    |||||||||||||||||||||||||||| || |||||||| ||  | ||||||||||| |||||||||||    
T  17784 taagggtgtgtttggatggagggtttaggagtggaagggaggg--gggtttacttttcttttttaaatta 17717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 408 - 486
Target Start/End: Complemental strand, 184847 - 184769
Alignment:
Q  408 tgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaattaaggacactatgaaat 486  Q
    |||||||||||||||||||||| |||| |||||| || || ||||||| ||| ||||||||||| ||||| ||| ||||    
T  184847 tgtgtttggatggagggtttaggagggaaagggaagggagggtttactattcttttttaaattatggacattataaaat 184769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 404 - 471
Target Start/End: Original strand, 6584 - 6651
Alignment:
Q  404 agggtgtgtttggatggagggtttagaaggggaagggatggaagagtttacttttcatttttaaatta 471  Q
    ||||||||||||||| || | ||||| ||| ||||||| || || ||||||||||| |||||||||||    
T  6584 agggtgtgtttggattgaagttttaggaggagaagggaggggagggtttacttttcttttttaaatta 6651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 400 - 429
Target Start/End: Complemental strand, 53121 - 53092
Alignment:
Q  400 attaagggtgtgtttggatggagggtttag 429  Q
    ||||||||||||||||||||||||||||||    
T  53121 attaagggtgtgtttggatggagggtttag 53092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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