View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1313_high_13 (Length: 261)
Name: NF1313_high_13
Description: NF1313
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1313_high_13 |
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Alignment Details
Target: chr3 (Bit Score: 250; Significance: 1e-139; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 1 - 254
Target Start/End: Original strand, 50027269 - 50027522
Alignment:
| Q |
1 |
agggttacctgaatttgaaagaactctagtatctagaggtgaagttggacttctaactgaatcagaatccaacaacccttttggacctaaacccacaaac |
100 |
Q |
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| T |
50027269 |
agggttacctgaatttgaaagaactctagtatctagaggtgaagttggacttctaactgaatcagaatccaacaacccttttggacctaaacccacaaac |
50027368 |
T |
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| Q |
101 |
aaacaaggaacattgaaaattggattgcctttgatattacgccctaaagcatgagattgagcataatgatcagaattagtatcagaatttgtcagatgac |
200 |
Q |
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| T |
50027369 |
aaacaaggaacattgaaaattggattgcctttgatattacgccctaaagcatgagattgagcataatgatcagaattagtatcagaatttgtcagatgac |
50027468 |
T |
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| Q |
201 |
ccatttggtgttgatctttctggattgacctacttctcttcctcagaattatct |
254 |
Q |
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| T |
50027469 |
ccatttggtgttgatctttctggattgacctacttctcttcctcagcattatct |
50027522 |
T |
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