View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1313_low_36 (Length: 253)
Name: NF1313_low_36
Description: NF1313
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1313_low_36 |
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Alignment Details
Target: chr7 (Bit Score: 221; Significance: 1e-122; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 221; E-Value: 1e-122
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 48170987 - 48171211
Alignment:
| Q |
1 |
aaagtttatatatatgtgcgggtggtcgagtttcaagttataatattttgatatatatacggttatgttatacttgtctcgctcaaccaaactgattgat |
100 |
Q |
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| T |
48170987 |
aaagtttatatatatgtgcgggtggtcgagtttcaagttataatattttgatatatatacgattatgttatacttgtctcgctcaaccaaactgattgat |
48171086 |
T |
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| Q |
101 |
gtataaacaagactttgacagaaatatacaaagatgtgtcaaagtgcggcgtgcatagatgaatgcatgttcaattgcaagctatcgtgaatgaacactt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
48171087 |
gtataaacaagactttgacagaaatatacaaagatgtgtcaaagtgcggcgtgcatagatgaatgcatgttcaattgcaagctatcgtgaatgaacactt |
48171186 |
T |
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| Q |
201 |
ccctcatctgattttctgctgctgg |
225 |
Q |
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||||||||||||||||||||||||| |
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| T |
48171187 |
ccctcatctgattttctgctgctgg |
48171211 |
T |
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