View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13141_low_4 (Length: 343)
Name: NF13141_low_4
Description: NF13141
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13141_low_4 |
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Alignment Details
Target: chr2 (Bit Score: 233; Significance: 1e-129; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 85 - 329
Target Start/End: Complemental strand, 34378390 - 34378147
Alignment:
| Q |
85 |
ttcttcggtacaaaaagtttgtttgttaatattttacttacacatgaaggtagtaattgtattctgatgtttctttttacgaggggatcttcttatacat |
184 |
Q |
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| T |
34378390 |
ttcttcggtacaaaaagtttgtttgttaatattttacttacacatgaaggtagtaattgtattttgatgtttctttttacgaggggatcttcttatacat |
34378291 |
T |
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| Q |
185 |
aattgatttgtcttatgatgtaagaataacagaattgttatacatcgtgccaaagtatacaactttcattttttgtcatgacatgaaaatattggccatt |
284 |
Q |
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| T |
34378290 |
aattgatttgtcttatgatgtaagaataacagaattgttatacatcgtgccaaagtatacaactttcattttttgtcatgacatgaaaatattggccatt |
34378191 |
T |
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| Q |
285 |
ctaacaaaaattgaagacctagctagcaaagatgggttgaatttg |
329 |
Q |
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| T |
34378190 |
ctaacaaaaattgaagacctagctagc-aagatgggttgaatttg |
34378147 |
T |
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