View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13142_low_2 (Length: 643)

Name: NF13142_low_2
Description: NF13142
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13142_low_2
NF13142_low_2
[»] chr6 (48 HSPs)
chr6 (9-643)||(33385390-33386012)
chr6 (241-643)||(33259659-33260069)
chr6 (58-328)||(33282300-33282561)
chr6 (357-545)||(31564627-31564815)
chr6 (367-494)||(24631856-24631983)
chr6 (58-226)||(33260104-33260266)
chr6 (501-643)||(9165259-9165407)
chr6 (512-643)||(33416228-33416359)
chr6 (81-315)||(31564219-31564454)
chr6 (109-219)||(33416561-33416671)
chr6 (364-484)||(34939755-34939873)
chr6 (370-452)||(2732194-2732274)
chr6 (377-497)||(281802-281920)
chr6 (536-643)||(24631978-24632085)
chr6 (357-462)||(7785678-7785781)
chr6 (364-436)||(32976035-32976107)
chr6 (357-436)||(4248991-4249070)
chr6 (365-451)||(29040104-29040188)
chr6 (377-436)||(32917254-32917313)
chr6 (357-436)||(31624315-31624396)
chr6 (377-437)||(283151-283211)
chr6 (377-436)||(3738126-3738185)
chr6 (377-436)||(27595521-27595580)
chr6 (365-436)||(27857415-27857486)
chr6 (513-556)||(31461608-31461651)
chr6 (274-333)||(33416475-33416534)
chr6 (377-462)||(2460105-2460188)
chr6 (509-555)||(5564222-5564268)
chr6 (393-462)||(9027611-9027678)
chr6 (370-495)||(11600821-11600944)
chr6 (512-558)||(31668781-31668827)
chr6 (357-462)||(32171500-32171603)
chr6 (379-437)||(34544100-34544158)
chr6 (357-462)||(34939546-34939649)
chr6 (505-554)||(2514634-2514683)
chr6 (506-555)||(3171521-3171570)
chr6 (505-558)||(3217279-3217332)
chr6 (513-554)||(4247731-4247772)
chr6 (505-558)||(4248886-4248939)
chr6 (512-545)||(20370840-20370873)
chr6 (422-486)||(27909637-27909699)
chr6 (288-325)||(33355463-33355500)
chr6 (377-437)||(1403052-1403112)
chr6 (402-457)||(2034425-2034478)
chr6 (377-437)||(2455866-2455926)
chr6 (392-436)||(3525181-3525225)
chr6 (373-452)||(10616492-10616568)
chr6 (505-560)||(30817655-30817711)
[»] scaffold0428 (2 HSPs)
scaffold0428 (58-578)||(3812-4332)
scaffold0428 (58-328)||(11691-11952)
[»] chr2 (44 HSPs)
chr2 (76-424)||(17443262-17443609)
chr2 (376-500)||(5759528-5759650)
chr2 (357-461)||(43456641-43456743)
chr2 (377-429)||(40943977-40944029)
chr2 (378-468)||(14299586-14299674)
chr2 (357-497)||(30552577-30552716)
chr2 (392-497)||(32821807-32821910)
chr2 (377-464)||(787363-787448)
chr2 (372-465)||(27237842-27237933)
chr2 (505-554)||(5045246-5045295)
chr2 (376-437)||(11344723-11344784)
chr2 (512-557)||(28933753-28933798)
chr2 (402-494)||(33525946-33526036)
chr2 (377-437)||(5902503-5902563)
chr2 (392-467)||(11063516-11063589)
chr2 (505-561)||(25609721-25609777)
chr2 (505-604)||(33197328-33197428)
chr2 (505-568)||(17952790-17952853)
chr2 (507-554)||(18962129-18962176)
chr2 (357-420)||(42852636-42852699)
chr2 (357-400)||(43199928-43199971)
chr2 (357-436)||(43529792-43529871)
chr2 (512-555)||(44443251-44443294)
chr2 (512-575)||(44606184-44606247)
chr2 (378-436)||(9878637-9878695)
chr2 (505-555)||(10143103-10143153)
chr2 (512-558)||(10190207-10190253)
chr2 (357-497)||(43141869-43142008)
chr2 (505-554)||(7282950-7282999)
chr2 (505-554)||(15119921-15119970)
chr2 (357-430)||(15120246-15120319)
chr2 (357-434)||(29430817-29430894)
chr2 (505-558)||(31461366-31461419)
chr2 (505-554)||(38239640-38239689)
chr2 (513-554)||(41033047-41033088)
chr2 (377-433)||(1318296-1318352)
chr2 (507-555)||(4026748-4026796)
chr2 (377-417)||(6547250-6547290)
chr2 (506-558)||(13864578-13864630)
chr2 (357-417)||(22878174-22878234)
chr2 (509-545)||(23747245-23747281)
chr2 (512-556)||(28902007-28902051)
chr2 (440-496)||(42419996-42420052)
chr2 (392-451)||(44606079-44606136)
[»] chr5 (36 HSPs)
chr5 (420-491)||(30653371-30653442)
chr5 (377-558)||(10391281-10391458)
chr5 (357-465)||(2880480-2880587)
chr5 (377-436)||(16380525-16380584)
chr5 (396-497)||(16889733-16889832)
chr5 (390-495)||(41957418-41957521)
chr5 (359-436)||(38047815-38047892)
chr5 (377-471)||(28586720-28586812)
chr5 (357-436)||(32172710-32172789)
chr5 (382-436)||(11457155-11457209)
chr5 (512-558)||(11684351-11684397)
chr5 (505-558)||(7096216-7096269)
chr5 (377-465)||(11700332-11700418)
chr5 (505-558)||(20982224-20982277)
chr5 (509-557)||(3951887-3951935)
chr5 (357-465)||(499665-499771)
chr5 (382-452)||(13264064-13264132)
chr5 (365-411)||(1084081-1084127)
chr5 (512-558)||(13224357-13224403)
chr5 (512-558)||(26516226-26516272)
chr5 (512-570)||(29588796-29588854)
chr5 (382-420)||(32190964-32191002)
chr5 (505-559)||(35135751-35135805)
chr5 (393-462)||(36774677-36774744)
chr5 (505-542)||(11615452-11615489)
chr5 (505-558)||(24084826-24084879)
chr5 (505-558)||(37063163-37063216)
chr5 (513-570)||(38819672-38819729)
chr5 (399-497)||(8651328-8651424)
chr5 (371-462)||(10280547-10280635)
chr5 (364-436)||(11095436-11095508)
chr5 (507-555)||(11835208-11835256)
chr5 (357-448)||(34205288-34205377)
chr5 (407-462)||(35963274-35963327)
chr5 (377-429)||(38036013-38036065)
chr5 (505-557)||(39128568-39128620)
[»] chr3 (41 HSPs)
chr3 (377-462)||(43115089-43115172)
chr3 (362-464)||(27016389-27016488)
chr3 (359-437)||(24624266-24624344)
chr3 (377-462)||(37273167-37273250)
chr3 (357-437)||(21872229-21872309)
chr3 (357-419)||(22667477-22667539)
chr3 (357-419)||(22724116-22724178)
chr3 (359-486)||(30923835-30923959)
chr3 (380-462)||(11039296-11039376)
chr3 (390-495)||(1217767-1217870)
chr3 (512-558)||(16790452-16790498)
chr3 (437-558)||(38462209-38462339)
chr3 (512-570)||(49739483-49739541)
chr3 (505-554)||(20192695-20192744)
chr3 (370-486)||(39311626-39311740)
chr3 (505-558)||(41028940-41028993)
chr3 (377-437)||(22232889-22232948)
chr3 (377-488)||(26542544-26542653)
chr3 (357-452)||(41724255-41724348)
chr3 (512-558)||(25964370-25964416)
chr3 (397-431)||(28801327-28801361)
chr3 (381-486)||(36646340-36646443)
chr3 (377-462)||(42745071-42745154)
chr3 (392-493)||(54837003-54837102)
chr3 (505-558)||(905059-905112)
chr3 (377-457)||(20194987-20195065)
chr3 (364-417)||(24158457-24158510)
chr3 (393-465)||(27290871-27290941)
chr3 (512-545)||(30669066-30669099)
chr3 (507-556)||(31364831-31364880)
chr3 (380-460)||(36200131-36200209)
chr3 (357-452)||(42817156-42817249)
chr3 (505-558)||(44374733-44374786)
chr3 (505-554)||(49546576-49546625)
chr3 (516-553)||(52413221-52413258)
chr3 (505-545)||(1395612-1395652)
chr3 (365-433)||(8933847-8933915)
chr3 (508-556)||(22667355-22667403)
chr3 (508-556)||(22723994-22724042)
chr3 (505-545)||(32555070-32555110)
chr3 (390-497)||(34254775-34254880)
[»] chr8 (37 HSPs)
chr8 (365-497)||(39551151-39551281)
chr8 (377-496)||(30191095-30191212)
chr8 (377-462)||(13000378-13000461)
chr8 (371-433)||(26410340-26410402)
chr8 (437-495)||(30277257-30277315)
chr8 (394-486)||(10722633-10722723)
chr8 (377-497)||(28769293-28769411)
chr8 (377-495)||(11569411-11569527)
chr8 (357-418)||(2364394-2364455)
chr8 (401-497)||(8062327-8062421)
chr8 (437-523)||(10079082-10079170)
chr8 (505-558)||(14482130-14482183)
chr8 (357-418)||(24326106-24326167)
chr8 (397-465)||(25869240-25869306)
chr8 (377-497)||(30389097-30389215)
chr8 (394-489)||(9540967-9541060)
chr8 (364-495)||(11415154-11415283)
chr8 (357-497)||(12361190-12361330)
chr8 (441-497)||(31705083-31705139)
chr8 (384-458)||(4055577-4055649)
chr8 (513-579)||(8823490-8823557)
chr8 (389-428)||(9562228-9562267)
chr8 (377-436)||(29169890-29169949)
chr8 (377-471)||(41606857-41606949)
chr8 (383-487)||(26479793-26479895)
chr8 (377-434)||(34770927-34770984)
chr8 (443-492)||(39268522-39268571)
chr8 (505-558)||(40356799-40356852)
chr8 (507-556)||(42597331-42597380)
chr8 (357-417)||(778465-778525)
chr8 (506-558)||(5226530-5226582)
chr8 (512-556)||(11569555-11569599)
chr8 (507-555)||(26215427-26215475)
chr8 (505-545)||(34080355-34080395)
chr8 (360-404)||(37353109-37353153)
chr8 (357-437)||(39881655-39881735)
chr8 (386-465)||(42370324-42370401)
[»] chr7 (44 HSPs)
chr7 (358-462)||(39345504-39345606)
chr7 (357-462)||(48157054-48157157)
chr7 (377-465)||(33894657-33894743)
chr7 (357-534)||(46281076-46281249)
chr7 (358-495)||(39334193-39334328)
chr7 (376-437)||(12834915-12834976)
chr7 (357-558)||(3610674-3610882)
chr7 (377-462)||(20553136-20553219)
chr7 (505-554)||(5276156-5276205)
chr7 (359-487)||(12234825-12234951)
chr7 (357-457)||(36598290-36598388)
chr7 (358-462)||(39360056-39360158)
chr7 (357-437)||(30751575-30751655)
chr7 (361-495)||(3468614-3468746)
chr7 (357-428)||(27121528-27121599)
chr7 (377-435)||(7453351-7453409)
chr7 (512-558)||(7513562-7513608)
chr7 (512-558)||(8445214-8445260)
chr7 (512-558)||(24973872-24973918)
chr7 (512-558)||(24975832-24975878)
chr7 (503-545)||(28178910-28178952)
chr7 (382-436)||(29574584-29574638)
chr7 (505-555)||(30133980-30134030)
chr7 (512-554)||(33894555-33894597)
chr7 (401-497)||(39551526-39551620)
chr7 (520-558)||(45078221-45078259)
chr7 (357-481)||(1710744-1710865)
chr7 (513-558)||(7244630-7244675)
chr7 (513-578)||(22388001-22388066)
chr7 (423-495)||(24363601-24363671)
chr7 (518-555)||(25670687-25670724)
chr7 (383-436)||(27517265-27517318)
chr7 (505-554)||(28165023-28165072)
chr7 (505-550)||(31341130-31341175)
chr7 (365-434)||(41040224-41040293)
chr7 (506-554)||(5373157-5373205)
chr7 (402-465)||(27496387-27496447)
chr7 (402-465)||(27503045-27503105)
chr7 (505-557)||(28340933-28340985)
chr7 (513-545)||(28613631-28613663)
chr7 (383-497)||(33645920-33646032)
chr7 (377-425)||(40009544-40009592)
chr7 (384-462)||(45859488-45859563)
chr7 (506-558)||(46213731-46213783)
[»] chr1 (39 HSPs)
chr1 (357-494)||(10199342-10199477)
chr1 (357-462)||(12564433-12564536)
chr1 (370-489)||(6279405-6279522)
chr1 (357-433)||(23373247-23373323)
chr1 (364-497)||(15581252-15581383)
chr1 (505-558)||(870973-871026)
chr1 (377-448)||(32515395-32515464)
chr1 (373-467)||(3597231-3597323)
chr1 (505-555)||(6933050-6933100)
chr1 (392-465)||(15579512-15579583)
chr1 (402-495)||(27140478-27140569)
chr1 (357-462)||(31517674-31517777)
chr1 (357-462)||(33723316-33723419)
chr1 (364-452)||(38170631-38170717)
chr1 (357-417)||(5157148-5157208)
chr1 (486-558)||(6659631-6659703)
chr1 (514-558)||(13037792-13037836)
chr1 (437-497)||(14629978-14630038)
chr1 (382-430)||(28467268-28467316)
chr1 (377-437)||(29723545-29723605)
chr1 (357-495)||(6292493-6292628)
chr1 (505-564)||(46499943-46500002)
chr1 (507-558)||(49557069-49557120)
chr1 (357-462)||(44815237-44815340)
chr1 (505-555)||(45999377-45999427)
chr1 (505-558)||(289168-289221)
chr1 (505-570)||(4200145-4200210)
chr1 (377-461)||(12477242-12477323)
chr1 (440-497)||(15361711-15361768)
chr1 (399-436)||(27145978-27146015)
chr1 (357-418)||(44375293-44375354)
chr1 (380-452)||(45327623-45327693)
chr1 (505-553)||(1730825-1730873)
chr1 (400-495)||(11639393-11639486)
chr1 (377-460)||(17420238-17420319)
chr1 (411-462)||(28689440-28689489)
chr1 (383-450)||(29929581-29929646)
chr1 (501-569)||(41638395-41638463)
chr1 (505-545)||(50319233-50319273)
[»] chr4 (37 HSPs)
chr4 (505-558)||(47970246-47970299)
chr4 (357-433)||(25717653-25717729)
chr4 (377-486)||(19304935-19305042)
chr4 (385-462)||(23819122-23819197)
chr4 (505-579)||(51555956-51556030)
chr4 (406-497)||(24929491-24929580)
chr4 (357-436)||(2996630-2996709)
chr4 (357-436)||(6428075-6428154)
chr4 (357-462)||(47970329-47970432)
chr4 (504-558)||(8422925-8422979)
chr4 (357-462)||(21157801-21157904)
chr4 (382-462)||(3176063-3176141)
chr4 (513-558)||(4191667-4191712)
chr4 (359-436)||(52754656-52754733)
chr4 (437-497)||(7694022-7694082)
chr4 (365-471)||(29467566-29467670)
chr4 (370-495)||(9680671-9680794)
chr4 (377-435)||(10172120-10172178)
chr4 (357-431)||(25434346-25434420)
chr4 (377-462)||(27123306-27123389)
chr4 (357-435)||(29375961-29376039)
chr4 (392-497)||(43932433-43932536)
chr4 (379-417)||(50396760-50396798)
chr4 (500-554)||(51044543-51044597)
chr4 (505-558)||(969434-969487)
chr4 (512-557)||(4471100-4471145)
chr4 (383-436)||(21043195-21043248)
chr4 (512-557)||(28623218-28623263)
chr4 (508-553)||(37636297-37636342)
chr4 (379-436)||(41097212-41097269)
chr4 (506-554)||(4798649-4798697)
chr4 (385-437)||(6987703-6987755)
chr4 (377-417)||(9316601-9316641)
chr4 (386-453)||(25583634-25583699)
chr4 (358-426)||(28232612-28232680)
chr4 (512-556)||(32066505-32066549)
chr4 (506-570)||(44319866-44319929)
[»] scaffold0311 (1 HSPs)
scaffold0311 (365-464)||(10559-10656)
[»] scaffold0590 (1 HSPs)
scaffold0590 (505-558)||(1163-1216)
[»] scaffold0275 (1 HSPs)
scaffold0275 (505-558)||(2759-2812)
[»] scaffold0020 (1 HSPs)
scaffold0020 (357-495)||(159907-160043)
[»] scaffold0100 (1 HSPs)
scaffold0100 (512-558)||(42545-42591)
[»] scaffold0060 (1 HSPs)
scaffold0060 (512-558)||(63381-63427)
[»] scaffold0024 (1 HSPs)
scaffold0024 (370-459)||(27612-27699)
[»] scaffold0654 (1 HSPs)
scaffold0654 (505-570)||(6726-6791)
[»] scaffold0014 (1 HSPs)
scaffold0014 (505-570)||(116645-116710)
[»] scaffold0110 (2 HSPs)
scaffold0110 (357-496)||(4157-4294)
scaffold0110 (515-555)||(35895-35935)
[»] scaffold0091 (1 HSPs)
scaffold0091 (506-558)||(5947-5999)
[»] scaffold0032 (1 HSPs)
scaffold0032 (392-436)||(42691-42735)
[»] scaffold0003 (1 HSPs)
scaffold0003 (407-486)||(306335-306412)


Alignment Details
Target: chr6 (Bit Score: 539; Significance: 0; HSPs: 48)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 539; E-Value: 0
Query Start/End: Original strand, 9 - 643
Target Start/End: Complemental strand, 33386012 - 33385390
Alignment:
Q  9 gacatcatcatagttagattatttaacagatggatgannnnnnnnnnncttttgttatgaagggaggtttatttaactttgaatcttctatggataaatg 108  Q
    |||||||| ||||||||||||||||||||||||||||           |||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  33386012 gacatcataatagttagattatttaacagatggatgatttttttttt-cttttgttatgaagggagttttatttaactttgaatcttctatggataaatg 33385914  T
Q  109 taactgaagaaaagaataaagatccctctcctgaaagtcctccaactgaagaagtgccagaacaaacaccagtagcagtacaatttgaaggtgaagaagt 208  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  33385913 taactgaagaaaagaataaagttccctctcctgaaagtcctccaactgaagaagtgccagaacaaacaccagtagcagtacaagttgaaggtgaagaagt 33385814  T
Q  209 tgcaattgcattaaaaaacaaacaacagcgtatctaactctaatggacaaaccggaattacagcgtcagatgaaggcttgagcaaaggttgcaatttcat 308  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33385813 tgcaattgcattaaaaaacaaacaacagcgtatctaactctaatggacaaaccggaattacagcgtcagatgaaggcttgagcaaaggttgcaatttcat 33385714  T
Q  309 cttatttatttcatatttcatttctgaaagatgtataaacaaggatgcatttgaacttatatactgatataagcacttgtgaaactgtttggaagagttt 408  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  33385713 cttatttatttcatatttcatttctgaaagatgtataaacaaggatgcatttgaacttatctactgatataagcacttgtgaaactgtttggaagagttt 33385614  T
Q  409 atggaaacagctcatgacatgtccataaaagttgttttcagcttttttccataaactgtctagaaaagcttatgaaaatagcttatagcataagtatgac 508  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33385613 atggaaacagctcatgacatgtccataaaagttgttttcagcttttttccataaactgtctagaaaagcttatgaaaatagcttatagcataagtatgac 33385514  T
Q  509 ttcattttatcttttgttataaaaattgcttatacatcagcacttatatgtaaagtgcttatcttataagttttcattaggctgtttatccaaacaaggt 608  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||           |    
T  33385513 ttcattttatcttttgttataaaaattgcttatacatcagcacttatatgtaaagtgcttatcttataagttttcattaggctgttta-----------t 33385425  T
Q  609 cttaggtttccagcctgttcacctatctttgaatt 643  Q
    |||||||||||||||||||||||||||||||||||    
T  33385424 cttaggtttccagcctgttcacctatctttgaatt 33385390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 241 - 643
Target Start/End: Complemental strand, 33260069 - 33259659
Alignment:
Q  241 tctaactctaatggacaaaccggaattacagcgtcagatgaaggcttgagcaaaggttgcaatttcatcttatttatttcatatttcatttctgaaagat 340  Q
    |||||||||||  ||||||| || |||||| | | |||||||| | |||||||||||||||||||||||||||||  |||||||| || |||| ||||||    
T  33260069 tctaactctaacagacaaactggcattacaactttagatgaagtcctgagcaaaggttgcaatttcatcttatttgcttcatatt-caattctcaaagat 33259971  T
Q  341 gtataaacaaggatgcatttgaacttatatactgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagt 440  Q
    ||||||||||||||| ||||||||||||||| |||||||||||||||  ||||||||||||||||||||||||||| ||| ||||||||||||||||||     
T  33259970 gtataaacaaggatgtatttgaacttatatattgatataagcacttgccaaactgtttggaagagtttatggaaacggctaatgacatgtccataaaagc 33259871  T
Q  441 tgttttcagcttttttccataaactgtctagaaaagcttatgaaaatagcttatagcata---------agtatgacttcattttatcttttgttataaa 531  Q
    ||||||||||  |||| |||| ||||| ||||||||||||||||||||||||||||||||         |||||||||||| ||||||||||||||||||    
T  33259870 tgttttcagccattttacatatactgtatagaaaagcttatgaaaatagcttatagcatataggaaaacagtatgacttcaatttatcttttgttataaa 33259771  T
Q  532 aattgcttatacatcagcacttatatgtaaagtgcttatcttataagttttcattaggctgtttatccaaacaaggtcttaggtttccagcctgttcacc 631  Q
    ||| |||||||||| |||||||||||||||||  ||||||||||||| ||  |||||||||||||||||||||||||||||||||||||||||  | ||     
T  33259770 aatagcttatacataagcacttatatgtaaagctcttatcttataagcttgaattaggctgtttatccaaacaaggtcttaggtttccagccttcttaca 33259671  T
Q  632 tatctttgaatt 643  Q
    ||||||||||||    
T  33259670 tatctttgaatt 33259659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 58 - 328
Target Start/End: Complemental strand, 33282561 - 33282300
Alignment:
Q  58 ttttgttatgaagggaggtttatttaactttgaatcttctatggataaatgtaactgaagaaaagaataaagatccctctcctgaaagtcctccaactga 157  Q
    ||||||||||||||||| || ||||||| ||||||| ||||| || | ||||||| ||||||||  || ||| ||||||||||||||||||| || ||||    
T  33282561 ttttgttatgaagggagtttcatttaaccttgaatcctctattgacagatgtaacagaagaaaattatcaagttccctctcctgaaagtcctgcacctga 33282462  T
Q  158 agaagtgccagaacaaacaccagtagcagtacaatttgaaggtgaagaagttgcaattgcattaaaaaacaaacaacagcgtatctaactctaatggaca 257  Q
    ||||||||||||||||||||||||||||  ||      ||| ||||||||||||||||||||||||||| ||| |  || ||||||||||||||| ||||    
T  33282461 agaagtgccagaacaaacaccagtagcaacac------aagttgaagaagttgcaattgcattaaaaaa-aaaga--agtgtatctaactctaatagaca 33282371  T
Q  258 aaccggaattacagcgtcagatgaaggcttgagcaaaggttgcaatttcatcttatttatttcatatttca 328  Q
    ||| || |||||| | | |||||||||| |||||||||||||||||||||||||||||  |||||||||||    
T  33282370 aactggcattacaactttagatgaaggcctgagcaaaggttgcaatttcatcttatttgcttcatatttca 33282300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 357 - 545
Target Start/End: Original strand, 31564627 - 31564815
Alignment:
Q  357 atttgaacttatatactgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagctttttt 456  Q
    ||||||||||||| ||| |||| ||||||||||| ||||||| |||||||| ||||||||| || |||||||||||| |||||||||||||||||| |||    
T  31564627 atttgaacttatacactcatattagcacttgtgagactgtttcgaagagttaatggaaacaactaatgacatgtccacaaaagttgttttcagcttattt 31564726  T
Q  457 ccataaactgtctagaaaagcttatgaaaatagcttatagcata--agtatgacttcattttatcttttgttataaaaattgcttatacat 545  Q
    |||||   |||||||||||||||||||||||  ||| ||| | |  ||| |||||||||||||||  ||||||||||||| ||||||||||    
T  31564727 ccatatgttgtctagaaaagcttatgaaaatcacttgtaggaaaacagtgtgacttcattttatc--ttgttataaaaatagcttatacat 31564815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 367 - 494
Target Start/End: Original strand, 24631856 - 24631983
Alignment:
Q  367 atatactgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttccataaactg 466  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||| ||||||||||||| |||||| ||||| |||||| || |||    
T  24631856 atatactgatataagcacttgtgaaactatttggaagagtttatggaaacaactcatgatatgtccataaaagctgtttttagcttatttccaaaagctg 24631955  T
Q  467 tctagaaaagcttatgaaaatagcttat 494  Q
    | ||||||||||||| |  |||||||||    
T  24631956 tttagaaaagcttataaccatagcttat 24631983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 58 - 226
Target Start/End: Complemental strand, 33260266 - 33260104
Alignment:
Q  58 ttttgttatgaagggaggtttatttaactttgaatcttctatggataaatgtaactgaagaaaagaataaagatccctctcctgaaagtcctccaactga 157  Q
    ||||||||||||||||| || ||||||| ||||||| ||||| || | ||||||| ||||||||  || ||| ||||||||||||||| ||| |||| ||    
T  33260266 ttttgttatgaagggagtttcatttaaccttgaatcctctattgacagatgtaacagaagaaaacgatcaagttccctctcctgaaagccctgcaaccga 33260167  T
Q  158 agaagtgccagaacaaacaccagtagcagtacaatttgaaggtgaagaagttgcaattgcattaaaaaa 226  Q
    ||||||||||||||||||||||||||||| ||      ||| |||||||||||||||||||||||||||    
T  33260166 agaagtgccagaacaaacaccagtagcagcac------aagttgaagaagttgcaattgcattaaaaaa 33260104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 501 - 643
Target Start/End: Complemental strand, 9165407 - 9165259
Alignment:
Q  501 agtatgacttcattttatcttttgttataaaaattgcttatacatcagcacttatatgtaaagtgcttatcttataagttttcattaggctgtttatcca 600  Q
    ||||||||||||| ||| |||||||||||||||| |||||||||| || |||||||||| |||  ||||||||||||| ||| ||||||  |||||||||    
T  9165407 agtatgacttcatcttaccttttgttataaaaatagcttatacataagtacttatatgt-aagcacttatcttataagctttaattagggcgtttatcca 9165309  T
Q  601 aacaagg-------tcttaggtttccagcctgttcacctatctttgaatt 643  Q
    |||||||       || ||||||| |||||||||||||||||||||||||    
T  9165308 aacaaggtcatagctcataggtttgcagcctgttcacctatctttgaatt 9165259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 512 - 643
Target Start/End: Complemental strand, 33416359 - 33416228
Alignment:
Q  512 attttatcttttgttataaaaattgcttatacatcagcacttatatgtaaagtgcttatcttataagttttcattaggctgtttatccaaacaaggtctt 611  Q
    ||||||||||||||||||||||| |||||||||| |||||||  ||    || |||||||||||||| ||| |||||| ||||||||||||||||||| |    
T  33416359 attttatcttttgttataaaaatagcttatacataagcactttgataatgagcgcttatcttataagctttaattaggttgtttatccaaacaaggtcat 33416260  T
Q  612 aggtttccagcctgttcacctatctttgaatt 643  Q
     | |||| || |||||||||||||||||||||    
T  33416259 ggttttctagtctgttcacctatctttgaatt 33416228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 81 - 315
Target Start/End: Original strand, 31564219 - 31564454
Alignment:
Q  81 ttaactttgaatcttctatggataaatgtaactgaagaaaagaataaagatccctctcctgaaagtcctccaactgaagaag---tgccagaacaaacac 177  Q
    ||||||||||||| | |||| | | ||||||| ||||||||  || ||| |||||||||||| |||||| | ||||||||||   ||| ||| || ||||    
T  31564219 ttaactttgaatcatgtatg-acagatgtaacagaagaaaacgattaaggtccctctcctgagagtcctgccactgaagaagaagtgcaagagcagacac 31564317  T
Q  178 cagtagcagtacaatttgaaggtgaagaagttgcaattgcattaaaaaacaaacaacagcgtatctaactctaatggacaaaccggaattacagcgtcag 277  Q
    | || | ||||||| |||||| ||||||||||||||||||| |   | |||||||||| | ||||||| ||||||||||||||||| |||||  | ||||    
T  31564318 ctgtggtagtacaagttgaagatgaagaagttgcaattgca-tccgagacaaacaacaacttatctaattctaatggacaaaccggcattacttcttcag 31564416  T
Q  278 atgaaggcttgagcaaaggttgcaatttcatcttattt 315  Q
    |  |||||| ||| || |||| ||||||||||||||||    
T  31564417 acaaaggctcgagtaatggtttcaatttcatcttattt 31564454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 109 - 219
Target Start/End: Complemental strand, 33416671 - 33416561
Alignment:
Q  109 taactgaagaaaagaataaagatccctctcctgaaagtcctccaactgaagaagtgccagaacaaacaccagtagcagtacaatttgaaggtgaagaagt 208  Q
    ||||||||||||| ||| ||| ||||||||||||||||||| | |||||||| |||| |||||||||||| ||| ||| |||| |||||| |||||  ||    
T  33416671 taactgaagaaaacaatcaagttccctctcctgaaagtcctgccactgaagaggtgcaagaacaaacacctgtatcagcacaagttgaagatgaagcggt 33416572  T
Q  209 tgcaattgcat 219  Q
    |||||||||||    
T  33416571 tgcaattgcat 33416561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 364 - 484
Target Start/End: Complemental strand, 34939873 - 34939755
Alignment:
Q  364 cttatatactgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttccataaa 463  Q
    ||||| || ||| |||| || |||||||||||||| | |||| ||| |||||||||| ||||||||||||||||  ||||||||||||| ||||||||||    
T  34939873 cttatctagtgacataaacatttgtgaaactgttttggagagcttacggaaacagcttatgacatgtccataaa--ttgttttcagcttatttccataaa 34939776  T
Q  464 ctgtctagaaaagcttatgaa 484  Q
    || || || | ||||||||||    
T  34939775 ctctccaggatagcttatgaa 34939755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 370 - 452
Target Start/End: Original strand, 2732194 - 2732274
Alignment:
Q  370 tactgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagctt 452  Q
    |||||| |||||||||||||| ||||||||||| || |||||||||||||| ||||  ||||||||||  |||||||||||||    
T  2732194 tactgacataagcacttgtgagactgtttggaaaagcttatggaaacagctaatgatctgtccataaa--ttgttttcagctt 2732274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 377 - 497
Target Start/End: Original strand, 281802 - 281920
Alignment:
Q  377 ataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttccataaactgtctagaaaag 476  Q
    ||||| |||||||| ||||||||| |||| | |||||| || || |||||||||| ||||  |||||||||||||| ||||||| | || ||||| | ||    
T  281802 ataagtacttgtgagactgtttgggagagctaatggaagcaacttatgacatgtctataa--gttgttttcagcttatttccatgagctctctaggatag 281899  T
Q  477 cttatgaaaatagcttatagc 497  Q
    |||||||| | ||||||||||    
T  281900 cttatgaacacagcttatagc 281920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 536 - 643
Target Start/End: Original strand, 24631978 - 24632085
Alignment:
Q  536 gcttatacatcagcacttatatgtaaagtgcttatcttataagttttcattaggctgtttatccaaacaaggtcttaggtttccagcctgttcacctatc 635  Q
    |||||| ||| ||||||||||||  ||| | |||||||||||  ||| |||| | || |||||||||| ||||||||| |||||| | |||||||| |||    
T  24631978 gcttatgcataagcacttatatgataagcgtttatcttataatatttaattaagttgcttatccaaacgaggtcttagttttccaacttgttcaccaatc 24632077  T
Q  636 tttgaatt 643  Q
    ||||||||    
T  24632078 tttgaatt 24632085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 357 - 462
Target Start/End: Original strand, 7785678 - 7785781
Alignment:
Q  357 atttgaacttatatactgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagctttttt 456  Q
    ||||||| |||| |||||| |||||||||| ||  |||| ||| | |||||||  ||||||||| |||||||||| ||||  |||||||||||||| |||    
T  7785678 atttgaatttatctactgacataagcacttttgggactgattgaaggagtttacagaaacagcttatgacatgtctataa--gttgttttcagcttattt 7785775  T
Q  457 ccataa 462  Q
    ||||||    
T  7785776 ccataa 7785781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 364 - 436
Target Start/End: Complemental strand, 32976107 - 32976035
Alignment:
Q  364 cttatatactgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataa 436  Q
    ||||| |||||  ||||| |||||||| |||||||||||||| |||| ||||||||| ||||||| |||||||    
T  32976107 cttatttactggcataagtacttgtgagactgtttggaagagcttatagaaacagcttatgacatttccataa 32976035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 357 - 436
Target Start/End: Complemental strand, 4249070 - 4248991
Alignment:
Q  357 atttgaacttatatactgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataa 436  Q
    |||||| || || ||||||| ||||||||||||||| ||||| |||||| ||||| ||||| || ||| |||||||||||    
T  4249070 atttgagctgatttactgatgtaagcacttgtgaaattgttttgaagagcttatgaaaacaccttatggcatgtccataa 4248991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 365 - 451
Target Start/End: Original strand, 29040104 - 29040188
Alignment:
Q  365 ttatatactgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagct 451  Q
    ||||||||| | |||||||||||||| ||||||||| | ||||  | ||| ||||| |||||||||||||||||  |||||||||||    
T  29040104 ttatatactaacataagcacttgtgagactgtttgggatagttatttgaatcagcttatgacatgtccataaaa--tgttttcagct 29040188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 377 - 436
Target Start/End: Complemental strand, 32917313 - 32917254
Alignment:
Q  377 ataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataa 436  Q
    |||| ||||||||| ||||||||| |||| ||||||||||| || |||||||||||||||    
T  32917313 ataaacacttgtgagactgtttgggagagcttatggaaacaacttatgacatgtccataa 32917254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 357 - 436
Target Start/End: Complemental strand, 31624396 - 31624315
Alignment:
Q  357 atttgaacttatatactgatataagc--acttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataa 436  Q
    |||||| |||||||||||| ||||||    ||| || ||||||||| ||| |||||| ||||||||||||||||||||||||    
T  31624396 atttgagcttatatactgacataagctgttttgagagactgtttggtagaatttatgaaaacagctcatgacatgtccataa 31624315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 377 - 437
Target Start/End: Complemental strand, 283211 - 283151
Alignment:
Q  377 ataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaa 437  Q
    ||||||||||||||||||||||||| ||   |||  |||||||| ||||||||||||||||    
T  283211 ataagcacttgtgaaactgtttggaggaacgtataaaaacagcttatgacatgtccataaa 283151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 377 - 436
Target Start/End: Complemental strand, 3738185 - 3738126
Alignment:
Q  377 ataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataa 436  Q
    |||||| ||||||| |||||||| ||||  || ||||||||||| |||||||||||||||    
T  3738185 ataagcccttgtgagactgtttgaaagatcttgtggaaacagcttatgacatgtccataa 3738126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 377 - 436
Target Start/End: Original strand, 27595521 - 27595580
Alignment:
Q  377 ataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataa 436  Q
    |||||||||| ||| ||||||||| ||| |||||||||||| || ||||||||| |||||    
T  27595521 ataagcacttatgagactgtttgggagaatttatggaaacaacttatgacatgttcataa 27595580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 365 - 436
Target Start/End: Complemental strand, 27857486 - 27857415
Alignment:
Q  365 ttatatactgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataa 436  Q
    |||| |||||| |||  ||||||||||||||||||| |||| ||||| ||||| || ||||||| |||||||    
T  27857486 ttatctactgacatagacacttgtgaaactgtttgggagagcttatgaaaacaacttatgacatctccataa 27857415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 513 - 556
Target Start/End: Complemental strand, 31461651 - 31461608
Alignment:
Q  513 ttttatcttttgttataaaaattgcttatacatcagcacttata 556  Q
    ||||||||||||||||| |||| |||||||||| ||||||||||    
T  31461651 ttttatcttttgttatagaaatagcttatacataagcacttata 31461608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 274 - 333
Target Start/End: Complemental strand, 33416534 - 33416475
Alignment:
Q  274 tcagatgaaggcttgagcaaaggttgcaatttcatcttatttatttcatatttcatttct 333  Q
    ||||||||||||| ||| ||||||| | ||||||||||||||  ||||||||||| ||||    
T  33416534 tcagatgaaggctcgagtaaaggtttccatttcatcttatttgcttcatatttcaattct 33416475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 377 - 462
Target Start/End: Original strand, 2460105 - 2460188
Alignment:
Q  377 ataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttccataa 462  Q
    ||||| |||||||| ||||||||  |||| ||||||||||| || ||||||||||  |  |||||||||||| ||| |||||||||    
T  2460105 ataagtacttgtgagactgtttgagagagcttatggaaacaacttatgacatgtc--tttaagttgttttcaacttatttccataa 2460188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 509 - 555
Target Start/End: Original strand, 5564222 - 5564268
Alignment:
Q  509 ttcattttatcttttgttataaaaattgcttatacatcagcacttat 555  Q
    |||||||||||||||| |||| |||| ||||||||||||| ||||||    
T  5564222 ttcattttatcttttgctatataaatagcttatacatcagaacttat 5564268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 393 - 462
Target Start/End: Complemental strand, 9027678 - 9027611
Alignment:
Q  393 ctgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttccataa 462  Q
    ||||||| ||||| ||||||||| | || |||||||||||||  |||||||||||||||| ||| |||||    
T  9027678 ctgtttgaaagagcttatggaaataacttatgacatgtccat--aagttgttttcagcttattttcataa 9027611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 370 - 495
Target Start/End: Original strand, 11600821 - 11600944
Alignment:
Q  370 tactgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttccataaactgtct 469  Q
    |||||| |||| |||||||||  |||||| | ||||||| || |||||||| |||||||||||  ||||  | |||||||||| ||| ||||  || |      
T  11600821 tactgacataaacacttgtgaggctgttttgtagagtttttgaaaacagcttatgacatgtcc--aaaaactattttcagcttattttcataggctcttc 11600918  T
Q  470 agaaaagcttatgaaaatagcttata 495  Q
    |||| |||||||||||||| ||||||    
T  11600919 agaacagcttatgaaaataacttata 11600944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 512 - 558
Target Start/End: Original strand, 31668781 - 31668827
Alignment:
Q  512 attttatcttttgttataaaaattgcttatacatcagcacttatatg 558  Q
    ||||||| |||||||||| |||| |||||||||| ||||||||||||    
T  31668781 attttatgttttgttatagaaatagcttatacataagcacttatatg 31668827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 357 - 462
Target Start/End: Complemental strand, 32171603 - 32171500
Alignment:
Q  357 atttgaacttatatactgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagctttttt 456  Q
    |||||||||||| |||||| ||||||| |||||| |||| |||| |||| ||| ||||||| || |||| |  ||||| ||   |||||||||||| |||    
T  32171603 atttgaacttatttactgacataagcatttgtgagactggttgggagagcttaaggaaacaacttatgatacctccatgaa--ctgttttcagcttattt 32171506  T
Q  457 ccataa 462  Q
    ||||||    
T  32171505 ccataa 32171500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 379 - 437
Target Start/End: Original strand, 34544100 - 34544158
Alignment:
Q  379 aagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaa 437  Q
    |||||||||||||||| |||| ||||  ||||| |||||| | ||||||||||||||||    
T  34544100 aagcacttgtgaaactatttgaaagatcttatgaaaacagtttatgacatgtccataaa 34544158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 357 - 462
Target Start/End: Complemental strand, 34939649 - 34939546
Alignment:
Q  357 atttgaacttatatactgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagctttttt 456  Q
    |||||||||||| || |||  |||  |||||| ||| ||||||  |||| ||||||||||| || |||||| |||| |||  |||||||||||||| |||    
T  34939649 atttgaacttatctagtgacgtaacgacttgtaaaattgtttgagagagcttatggaaacaacttatgacacgtccgtaa--gttgttttcagcttattt 34939552  T
Q  457 ccataa 462  Q
    ||||||    
T  34939551 ccataa 34939546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 505 - 554
Target Start/End: Complemental strand, 2514683 - 2514634
Alignment:
Q  505 tgacttcattttatcttttgttataaaaattgcttatacatcagcactta 554  Q
    |||||| |||||||||||| ||||| |||| |||||||||| ||||||||    
T  2514683 tgactttattttatcttttattatagaaatagcttatacataagcactta 2514634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 506 - 555
Target Start/End: Original strand, 3171521 - 3171570
Alignment:
Q  506 gacttcattttatcttttgttataaaaattgcttatacatcagcacttat 555  Q
    ||||| ||||||||||||||||||||||| |||||| ||| ||| |||||    
T  3171521 gacttaattttatcttttgttataaaaatagcttatgcataagcgcttat 3171570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 505 - 558
Target Start/End: Original strand, 3217279 - 3217332
Alignment:
Q  505 tgacttcattttatcttttgttataaaaattgcttatacatcagcacttatatg 558  Q
    |||||| |||||||||| | ||| |||||| |||||||||| ||||||||||||    
T  3217279 tgactttattttatcttctcttacaaaaatagcttatacataagcacttatatg 3217332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 513 - 554
Target Start/End: Original strand, 4247731 - 4247772
Alignment:
Q  513 ttttatcttttgttataaaaattgcttatacatcagcactta 554  Q
    ||||||||||||||||| |||| |||||||||| ||||||||    
T  4247731 ttttatcttttgttatagaaatagcttatacataagcactta 4247772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 505 - 558
Target Start/End: Complemental strand, 4248939 - 4248886
Alignment:
Q  505 tgacttcattttatcttttgttataaaaattgcttatacatcagcacttatatg 558  Q
    |||||| |||||||||||||||||  |||| ||||||| || ||||||||||||    
T  4248939 tgactttattttatcttttgttattgaaatagcttatatataagcacttatatg 4248886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 512 - 545
Target Start/End: Complemental strand, 20370873 - 20370840
Alignment:
Q  512 attttatcttttgttataaaaattgcttatacat 545  Q
    ||||||||||||||||||||||| ||||||||||    
T  20370873 attttatcttttgttataaaaatagcttatacat 20370840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 422 - 486
Target Start/End: Original strand, 27909637 - 27909699
Alignment:
Q  422 atgacatgtccataaaagttgttttcagcttttttccataaactgtctagaaaagcttatgaaaa 486  Q
    |||||||||||||||  |||||||||||||| ||||||||| || || || ||||||||| ||||    
T  27909637 atgacatgtccataa--gttgttttcagcttatttccataagctctccagtaaagcttataaaaa 27909699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 288 - 325
Target Start/End: Complemental strand, 33355500 - 33355463
Alignment:
Q  288 gagcaaaggttgcaatttcatcttatttatttcatatt 325  Q
    ||||||||||||||||||||||||||||  ||||||||    
T  33355500 gagcaaaggttgcaatttcatcttatttgcttcatatt 33355463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 377 - 437
Target Start/End: Complemental strand, 1403112 - 1403052
Alignment:
Q  377 ataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaa 437  Q
    |||||||||||||| ||||| ||| ||||||||| |||||| || ||||||| || |||||    
T  1403112 ataagcacttgtgagactgtgtgggagagtttatcgaaacaacttatgacatatctataaa 1403052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 402 - 457
Target Start/End: Original strand, 2034425 - 2034478
Alignment:
Q  402 agagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttc 457  Q
    ||||||||||||||||||| ||||||| |||||  ||| |||||||||||| ||||    
T  2034425 agagtttatggaaacagcttatgacatttccat--aagctgttttcagcttatttc 2034478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 377 - 437
Target Start/End: Complemental strand, 2455926 - 2455866
Alignment:
Q  377 ataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaa 437  Q
    ||||||||||| || | ||||| |||||| ||||||||||| || |||||||| |||||||    
T  2455926 ataagcacttgcgagattgtttagaagagcttatggaaacaacttatgacatgcccataaa 2455866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 392 - 436
Target Start/End: Complemental strand, 3525225 - 3525181
Alignment:
Q  392 actgtttggaagagtttatggaaacagctcatgacatgtccataa 436  Q
    |||||| ||||||||||||||||| || | |||||||||||||||    
T  3525225 actgttcggaagagtttatggaaatagtttatgacatgtccataa 3525181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 373 - 452
Target Start/End: Original strand, 10616492 - 10616568
Alignment:
Q  373 tgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagctt 452  Q
    ||||||||||| ||||||| || ||||| |||| ||||||||||| || ||||||||||| |  ||||||| ||||||||    
T  10616492 tgatataagcatttgtgaa-ctatttgggagagcttatggaaacaacttatgacatgtccgt--aagttgtgttcagctt 10616568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 505 - 560
Target Start/End: Original strand, 30817655 - 30817711
Alignment:
Q  505 tgacttcattttatcttttgttat-aaaaattgcttatacatcagcacttatatgta 560  Q
    |||||| |||||| |||||||||| |||||| || ||||||| ||||||||||||||    
T  30817655 tgactttattttaccttttgttataaaaaatagcatatacataagcacttatatgta 30817711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0428 (Bit Score: 264; Significance: 1e-147; HSPs: 2)
Name: scaffold0428
Description:

Target: scaffold0428; HSP #1
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 58 - 578
Target Start/End: Complemental strand, 4332 - 3812
Alignment:
Q  58 ttttgttatgaagggaggtttatttaactttgaatcttctatggataaatgtaactgaagaaaagaataaagatccctctcctgaaagtcctccaactga 157  Q
    ||||||||||||||||| || ||||||| ||||||| ||||| || | ||||||| ||||||||  || ||| |||| |||||||||||||| || ||||    
T  4332 ttttgttatgaagggagtttcatttaaccttgaatcctctattgacagatgtaacagaagaaaacgatcaagttcccactcctgaaagtcctgcacctga 4233  T
Q  158 agaagtgccagaacaaacaccagtagcagtacaatttgaaggtgaagaagttgcaattgcattaaaaaacaaacaacagcgtatctaactctaatggaca 257  Q
    ||||||||||||||||||||||||||||  |||| ||||||      |||||||||||||||||||||| ||| ||  | ||||||||||||||| ||||    
T  4232 agaagtgccagaacaaacaccagtagcatcacaagttgaag------aagttgcaattgcattaaaaaa-aaagaa--gtgtatctaactctaatagaca 4142  T
Q  258 aaccggaattacagcgtcagatgaaggcttgagcaaaggttgcaatttcatcttatttatttcatatttcatttctgaaagatgtataaacaaggatgca 357  Q
    ||| || |||||| | | |||||||||| |||||||||||| ||||||||||||||||  ||| ||||||| |||| |||||| |||||||||||||| |    
T  4141 aactggcattacaactttagatgaaggcctgagcaaaggttacaatttcatcttattttcttcgtatttcaattctcaaagatatataaacaaggatgta 4042  T
Q  358 tttgaacttatatactgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttc 457  Q
    |||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||  ||||     
T  4041 tttgaacttatatattgatataagcacttgtgagactgtttggaagagtttatggaaacggctcatgacatgtccataaaagctgttttcagccatttta 3942  T
Q  458 cataaactgtctagaaaagcttatgaaaatagcttatagcata---------agtatgacttcattttatcttttgttataaaaattgcttatacatcag 548  Q
    |||| ||||||||||||||||||||||||||||||||||||||         |||||||||||| ||||||||||||||||||||| ||||| |||| ||    
T  3941 catatactgtctagaaaagcttatgaaaatagcttatagcatataggaaaacagtatgacttcagtttatcttttgttataaaaatagcttacacataag 3842  T
Q  549 cacttatatgtaaagtgcttatcttataag 578  Q
    ||||||||||||||| ||||||||||||||    
T  3841 cacttatatgtaaagcgcttatcttataag 3812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0428; HSP #2
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 58 - 328
Target Start/End: Original strand, 11691 - 11952
Alignment:
Q  58 ttttgttatgaagggaggtttatttaactttgaatcttctatggataaatgtaactgaagaaaagaataaagatccctctcctgaaagtcctccaactga 157  Q
    ||||||||||||||||| |||||||||||||||||| ||||| || | ||||||| ||||||||  || ||| ||||||||||||||||||| || ||||    
T  11691 ttttgttatgaagggagttttatttaactttgaatcctctatcgacagatgtaacagaagaaaattatcaagttccctctcctgaaagtcctgcacctga 11790  T
Q  158 agaagtgccagaacaaacaccagtagcagtacaatttgaaggtgaagaagttgcaattgcattaaaaaacaaacaacagcgtatctaactctaatggaca 257  Q
    ||||||||||||||||||||||||||||| ||      ||| ||||||||||||||||||||||||||| ||| |  || ||||||||||||||| ||||    
T  11791 agaagtgccagaacaaacaccagtagcagcac------aagttgaagaagttgcaattgcattaaaaaa-aaaga--agtgtatctaactctaatagaca 11881  T
Q  258 aaccggaattacagcgtcagatgaaggcttgagcaaaggttgcaatttcatcttatttatttcatatttca 328  Q
    ||| || |||||| | | |||||||||| |||||||||||||||||||||||||||||  |||||||||||    
T  11882 aactggcattacaactttagatgaaggcctgagcaaaggttgcaatttcatcttatttgcttcatatttca 11952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 213; Significance: 1e-116; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 213; E-Value: 1e-116
Query Start/End: Original strand, 76 - 424
Target Start/End: Original strand, 17443262 - 17443609
Alignment:
Q  76 tttatttaactttgaatcttctatggataaatgtaactgaagaaaagaataaagatccctctcctgaaagtcctccaactgaagaagtgccagaacaaac 175  Q
    |||||||||||||||||| |||||| | | ||||||| |||||||| ||| ||| || |||||||||||||||| ||||  |||||||||||||||||||    
T  17443262 tttatttaactttgaatcctctatgaacagatgtaacagaagaaaacaatgaagttctctctcctgaaagtcctgcaaccaaagaagtgccagaacaaac 17443361  T
Q  176 accagtagcagtacaatttgaaggtgaagaagttgcaattgcattaaaaaacaaacaacagcgtatctaactctaatggacaaaccggaattacagcgtc 275  Q
    ||||| ||| | |||| ||||| ||||||||||||||||||||||  ||| |||||||  |||||||||||||||||||||||||| | |||||||| ||    
T  17443362 accagcagcggcacaagttgaacgtgaagaagttgcaattgcatttgaaa-caaacaatggcgtatctaactctaatggacaaaccagcattacagcttc 17443460  T
Q  276 agatgaaggcttgagcaaaggttgcaatttcatcttatttatttcatatttcatttctgaaagatgtataaacaaggatgcatttgaacttatatactga 375  Q
    |||||||||||||| |||||||||||||||||||||||||  |||| |||||| |||| ||||||||||||||||||||| |||||||||||||||||||    
T  17443461 agatgaaggcttgaccaaaggttgcaatttcatcttatttgcttcaaatttcaattctcaaagatgtataaacaaggatgtatttgaacttatatactga 17443560  T
Q  376 tataagcacttgtgaaactgtttggaagagtttatggaaacagctcatg 424  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||    
T  17443561 tataagcacttgtgagactgtttggaagagtttatggaaacagctcatg 17443609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 376 - 500
Target Start/End: Original strand, 5759528 - 5759650
Alignment:
Q  376 tataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgt-tttcagcttttttccataaactgtctagaaa 474  Q
    |||||| |||||||| ||||||||| |||| |||||||||||||| | |||||||||||  ||||||| ||||||||| ||| || ||||  || ||||     
T  5759528 tataagtacttgtgagactgtttgggagagcttatggaaacagctta-gacatgtccat--aagttgtgtttcagcttattttcacaaaccctccagaat 5759624  T
Q  475 agcttatgaaaatagcttatagcata 500  Q
    |||||||||||| |||||||||||||    
T  5759625 agcttatgaaaacagcttatagcata 5759650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 357 - 461
Target Start/End: Original strand, 43456641 - 43456743
Alignment:
Q  357 atttgaacttatatactgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagctttttt 456  Q
    |||||||||||| |||| | |||| ||||||| | |||||||| ||||| || || ||||| |||||||||||||||||||   |||||||||||| |||    
T  43456641 atttgaacttatttactcacataaacacttgtaagactgtttgaaagagcttgtgaaaacaactcatgacatgtccataaa--ctgttttcagcttattt 43456738  T
Q  457 ccata 461  Q
    |||||    
T  43456739 ccata 43456743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 377 - 429
Target Start/End: Complemental strand, 40944029 - 40943977
Alignment:
Q  377 ataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatg 429  Q
    |||||||||||||||||||||||||| |||||||| |||||||| ||||||||    
T  40944029 ataagcacttgtgaaactgtttggaaaagtttatgaaaacagcttatgacatg 40943977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 378 - 468
Target Start/End: Original strand, 14299586 - 14299674
Alignment:
Q  378 taagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttccataaactgtc 468  Q
    |||||||||| |  |||||||||||||||||||||||||| || ||||||| |||||| |  ||||||||||||| |||| |||| |||||    
T  14299586 taagcacttgagggactgtttggaagagtttatggaaacaacttatgacatatccataca--ttgttttcagcttatttctataagctgtc 14299674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 357 - 497
Target Start/End: Original strand, 30552577 - 30552716
Alignment:
Q  357 atttgaacttatatactgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagtt-gttttcagcttttt 455  Q
    |||||| ||||| ||||| ||||||||||| ||||||||||||  | || |||| |||||| || |||||||||| ||  ||||| ||||| ||||| ||    
T  30552577 atttgagcttatctactggtataagcacttttgaaactgtttgagataggttatcgaaacaacttatgacatgtcaat--aagttggtttttagcttatt 30552674  T
Q  456 tccataaactgtctagaaaagcttatgaaaatagcttatagc 497  Q
    ||||||| || ||||| | || |||||||||||  |||||||    
T  30552675 tccataagctctctaggatagtttatgaaaataatttatagc 30552716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 392 - 497
Target Start/End: Complemental strand, 32821910 - 32821807
Alignment:
Q  392 actgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttccataaactgtctagaaaagcttatgaaaatagct 491  Q
    ||||||||||||||||||| |||||| || |||||||||||||  ||| ||||||||| || |||| |||| || | ||| | |||||||||||| || |    
T  32821910 actgtttggaagagtttatagaaacaacttatgacatgtccat--aagctgttttcagtttatttctataagctctttaggatagcttatgaaaacagtt 32821813  T
Q  492 tatagc 497  Q
    ||||||    
T  32821812 tatagc 32821807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 377 - 464
Target Start/End: Complemental strand, 787448 - 787363
Alignment:
Q  377 ataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttccataaac 464  Q
    |||||||||||||| ||||||||  |||  ||||| |||||||| |||||||||||||  ||| |||||||||||| | |||||||||    
T  787448 ataagcacttgtgacactgtttgtgagaacttatgaaaacagcttatgacatgtccat--aagctgttttcagcttatctccataaac 787363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 372 - 465
Target Start/End: Original strand, 27237842 - 27237933
Alignment:
Q  372 ctgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttccataaact 465  Q
    |||| |||| |||| |||||||||||||| |||  |||| ||||||||| ||||||||| |||  ||| |||||| ||||| ||||||||||||    
T  27237842 ctgacataaacactagtgaaactgtttggtagaacttatagaaacagcttatgacatgtacat--aagctgtttttagcttatttccataaact 27237933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 505 - 554
Target Start/End: Original strand, 5045246 - 5045295
Alignment:
Q  505 tgacttcattttatcttttgttataaaaattgcttatacatcagcactta 554  Q
    |||||| ||||||||||||||||||||||| |||||||||| | ||||||    
T  5045246 tgactttattttatcttttgttataaaaatagcttatacataaacactta 5045295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 376 - 437
Target Start/End: Original strand, 11344723 - 11344784
Alignment:
Q  376 tataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaa 437  Q
    |||||| |||||||||||||||||  |||  ||||||||||| || ||||||||||||||||    
T  11344723 tataagtacttgtgaaactgtttgacagaccttatggaaacaacttatgacatgtccataaa 11344784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 512 - 557
Target Start/End: Complemental strand, 28933798 - 28933753
Alignment:
Q  512 attttatcttttgttataaaaattgcttatacatcagcacttatat 557  Q
    |||||||||||||||||| |||| |||||||||| |||||||||||    
T  28933798 attttatcttttgttatataaatagcttatacatgagcacttatat 28933753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 402 - 494
Target Start/End: Original strand, 33525946 - 33526036
Alignment:
Q  402 agagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttccataaactgtctagaaaagcttatgaaaatagcttat 494  Q
    |||||| ||||||||| || || ||||||||||||  |||| ||||||||| |||| ||||||  ||||| | |||||||||||| |||||||    
T  33525946 agagttcatggaaacaacttataacatgtccataa--gttggtttcagcttatttctataaaccttctagtatagcttatgaaaaaagcttat 33526036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 377 - 437
Target Start/End: Original strand, 5902503 - 5902563
Alignment:
Q  377 ataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaa 437  Q
    |||| ||||||||| |||||||||||||  ||||| |||||||| ||||||||| ||||||    
T  5902503 ataaacacttgtgagactgtttggaagaacttatgaaaacagcttatgacatgttcataaa 5902563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 392 - 467
Target Start/End: Complemental strand, 11063589 - 11063516
Alignment:
Q  392 actgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttccataaactgt 467  Q
    |||||||||||||| |||||||||||  | |||||||||||||  |||||||||| ||||| ||| ||||| ||||    
T  11063589 actgtttggaagagcttatggaaacatattatgacatgtccat--aagttgtttttagcttattttcataagctgt 11063516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 505 - 561
Target Start/End: Complemental strand, 25609777 - 25609721
Alignment:
Q  505 tgacttcattttatcttttgttataaaaattgcttatacatcagcacttatatgtaa 561  Q
    |||||| |||||||||||| ||||| |||| |||||||||| ||||||||| |||||    
T  25609777 tgactttattttatcttttcttatagaaatagcttatacataagcacttatgtgtaa 25609721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 505 - 604
Target Start/End: Original strand, 33197328 - 33197428
Alignment:
Q  505 tgacttcattttatcttttgttataaaaattgcttatacatcagcacttatatgtaaagtgcttatcttataagt-tttcattaggctgtttatccaaac 603  Q
    |||||| ||| |||||||||||||| |||| ||||||| || ||||||||||||  ||| | |||| |||||||| ||| |||  | |||||||||||||    
T  33197328 tgactttattctatcttttgttatagaaatagcttatagataagcacttatatgataagcgtttatgttataagtgtttaatttagttgtttatccaaac 33197427  T
Q  604 a 604  Q
    |    
T  33197428 a 33197428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 505 - 568
Target Start/End: Original strand, 17952790 - 17952853
Alignment:
Q  505 tgacttcattttatcttttgttataaaaattgcttatacatcagcacttatatgtaaagtgctt 568  Q
    |||||| |||||||||||||||||| |||| ||||||| || ||| ||||||||  ||||||||    
T  17952790 tgactttattttatcttttgttatagaaatagcttatatataagctcttatatgataagtgctt 17952853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 507 - 554
Target Start/End: Original strand, 18962129 - 18962176
Alignment:
Q  507 acttcattttatcttttgttataaaaattgcttatacatcagcactta 554  Q
    |||| ||||||||||||||||||||||| ||| |||||| ||||||||    
T  18962129 actttattttatcttttgttataaaaatagctaatacataagcactta 18962176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 357 - 420
Target Start/End: Original strand, 42852636 - 42852699
Alignment:
Q  357 atttgaacttatatactgatataagcacttgtgaaactgtttggaagagtttatggaaacagct 420  Q
    |||||||||||| | |||  |||||||||||||| ||||||||||||||  |||| ||||||||    
T  42852636 atttgaacttatctgctggcataagcacttgtgagactgtttggaagagcctatgaaaacagct 42852699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 357 - 400
Target Start/End: Complemental strand, 43199971 - 43199928
Alignment:
Q  357 atttgaacttatatactgatataagcacttgtgaaactgtttgg 400  Q
    |||||||||||| |||| |||||||||||||||| |||||||||    
T  43199971 atttgaacttatctactcatataagcacttgtgagactgtttgg 43199928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 357 - 436
Target Start/End: Original strand, 43529792 - 43529871
Alignment:
Q  357 atttgaacttatatactgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataa 436  Q
    |||||| ||||| || || ||||||||||| ||| ||||||||| ||| |||||| |||||||| ||| ||||| |||||    
T  43529792 atttgagcttatctattggtataagcacttctgacactgtttgggagaatttatgaaaacagcttatgccatgttcataa 43529871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 512 - 555
Target Start/End: Complemental strand, 44443294 - 44443251
Alignment:
Q  512 attttatcttttgttataaaaattgcttatacatcagcacttat 555  Q
    |||||||||||||| |||||||| |||||||||| |||||||||    
T  44443294 attttatcttttgtaataaaaatagcttatacataagcacttat 44443251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 512 - 575
Target Start/End: Original strand, 44606184 - 44606247
Alignment:
Q  512 attttatcttttgttataaaaattgcttatacatcagcacttatatgtaaagtgcttatcttat 575  Q
    ||||||||||||||||| ||||| |||||||||| | |||||||||   ||| |||||||||||    
T  44606184 attttatcttttgttatgaaaatagcttatacataaacacttatataataagcgcttatcttat 44606247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 378 - 436
Target Start/End: Original strand, 9878637 - 9878695
Alignment:
Q  378 taagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataa 436  Q
    ||||||||| ||| |||||  ||||||| ||||||||||| || |||||||||||||||    
T  9878637 taagcacttctgagactgtagggaagagcttatggaaacaacttatgacatgtccataa 9878695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 505 - 555
Target Start/End: Complemental strand, 10143153 - 10143103
Alignment:
Q  505 tgacttcattttatcttttgttataaaaattgcttatacatcagcacttat 555  Q
    |||||| |||||||||||||||||| ||||  ||||||||| |||||||||    
T  10143153 tgacttaattttatcttttgttatagaaataacttatacataagcacttat 10143103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 512 - 558
Target Start/End: Complemental strand, 10190253 - 10190207
Alignment:
Q  512 attttatcttttgttataaaaattgcttatacatcagcacttatatg 558  Q
    |||||||| |||||||||||||| | |||||||| ||||||||||||    
T  10190253 attttatcctttgttataaaaatagtttatacataagcacttatatg 10190207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 357 - 497
Target Start/End: Complemental strand, 43142008 - 43141869
Alignment:
Q  357 atttgaacttatatactgatataagcacttgtgaaactgtttggaagagtttatgg-aaacagctcatgacatgtccataaaagttgttttcagcttttt 455  Q
    |||||| ||||| |||| | ||||||| ||||||||| |||||  || | |||||| ||||| || |||||||| ||||||  ||||||||||  || ||    
T  43142008 atttgagcttatctactaacataagcaattgtgaaacagtttgacagcgcttatgggaaacaacttatgacatgcccataa--gttgttttcattttatt 43141911  T
Q  456 tccataaactgtctagaaaagcttatgaaaatagcttatagc 497  Q
    |||||||||| |  || | |||||||||||| | ||||||||    
T  43141910 tccataaactcttcaggatagcttatgaaaacatcttatagc 43141869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 505 - 554
Target Start/End: Complemental strand, 7282999 - 7282950
Alignment:
Q  505 tgacttcattttatcttttgttataaaaattgcttatacatcagcactta 554  Q
    |||||||||||| |||||| |||||||||| |||||||||| | ||||||    
T  7282999 tgacttcattttttcttttcttataaaaatagcttatacataaacactta 7282950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 505 - 554
Target Start/End: Complemental strand, 15119970 - 15119921
Alignment:
Q  505 tgacttcattttatcttttgttataaaaattgcttatacatcagcactta 554  Q
    ||||||||||||| ||||||||||| |||  |||||||||| ||||||||    
T  15119970 tgacttcattttagcttttgttatagaaaaagcttatacataagcactta 15119921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 357 - 430
Target Start/End: Complemental strand, 15120319 - 15120246
Alignment:
Q  357 atttgaacttatatactgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgt 430  Q
    |||||||||||| ||||   |||| || ||||||| |||||||| |||| ||||||||||| || |||||||||    
T  15120319 atttgaacttatctactagcataaacagttgtgaatctgtttgggagagcttatggaaacaacttatgacatgt 15120246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 357 - 434
Target Start/End: Complemental strand, 29430894 - 29430817
Alignment:
Q  357 atttgaacttatatactgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccat 434  Q
    |||||| ||||| |||||| |||| ||||||||  ||| |||||||||  ||||| ||| |||| |||||||||||||    
T  29430894 atttgagcttatctactgacataaacacttgtgggactatttggaagaacttatgaaaatagcttatgacatgtccat 29430817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 505 - 558
Target Start/End: Complemental strand, 31461419 - 31461366
Alignment:
Q  505 tgacttcattttatcttttgttataaaaattgcttatacatcagcacttatatg 558  Q
    |||||| |||||||||||||||||| |||| ||||||| || | ||||||||||    
T  31461419 tgactttattttatcttttgttatagaaatagcttatatataaccacttatatg 31461366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 505 - 554
Target Start/End: Original strand, 38239640 - 38239689
Alignment:
Q  505 tgacttcattttatcttttgttataaaaattgcttatacatcagcactta 554  Q
    |||||| |||||||||||||||||| |||| |||||||||| | ||||||    
T  38239640 tgacttgattttatcttttgttatagaaatagcttatacataaacactta 38239689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 513 - 554
Target Start/End: Original strand, 41033047 - 41033088
Alignment:
Q  513 ttttatcttttgttataaaaattgcttatacatcagcactta 554  Q
    ||||||||||||||||| |||| |||||||||| ||||||||    
T  41033047 ttttatcttttgttatagaaatagcttatacataagcactta 41033088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 377 - 433
Target Start/End: Complemental strand, 1318352 - 1318296
Alignment:
Q  377 ataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtcca 433  Q
    |||||||||||||| ||||||||  |||| ||||| ||||| || ||||||||||||    
T  1318352 ataagcacttgtgagactgtttgtgagagcttatgaaaacatcttatgacatgtcca 1318296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 507 - 555
Target Start/End: Complemental strand, 4026796 - 4026748
Alignment:
Q  507 acttcattttatcttttgttataaaaattgcttatacatcagcacttat 555  Q
    |||| ||||||||||||| ||||||||| ||||||| || |||||||||    
T  4026796 actttattttatcttttgctataaaaatagcttatagataagcacttat 4026748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 377 - 417
Target Start/End: Complemental strand, 6547290 - 6547250
Alignment:
Q  377 ataagcacttgtgaaactgtttggaagagtttatggaaaca 417  Q
    |||||||||||||| ||||||||  ||||||||||||||||    
T  6547290 ataagcacttgtgagactgtttgtgagagtttatggaaaca 6547250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 506 - 558
Target Start/End: Complemental strand, 13864630 - 13864578
Alignment:
Q  506 gacttcattttatcttttgttataaaaattgcttatacatcagcacttatatg 558  Q
    ||||| |||||| ||||||||||| |||| |||||||||| | ||||||||||    
T  13864630 gactttattttaccttttgttatagaaatagcttatacataaacacttatatg 13864578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 357 - 417
Target Start/End: Complemental strand, 22878234 - 22878174
Alignment:
Q  357 atttgaacttatatactgatataagcacttgtgaaactgtttggaagagtttatggaaaca 417  Q
    |||||| |||||  ||||| |||||||||||||| ||||||||| |||  |||||||||||    
T  22878234 atttgagcttatccactgacataagcacttgtgagactgtttgggagaccttatggaaaca 22878174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 509 - 545
Target Start/End: Complemental strand, 23747281 - 23747245
Alignment:
Q  509 ttcattttatcttttgttataaaaattgcttatacat 545  Q
    |||||||||||||||| ||||||||| ||||||||||    
T  23747281 ttcattttatcttttgatataaaaatagcttatacat 23747245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 512 - 556
Target Start/End: Complemental strand, 28902051 - 28902007
Alignment:
Q  512 attttatcttttgttataaaaattgcttatacatcagcacttata 556  Q
    |||||| ||| |||||||||||| |||||||||| ||||||||||    
T  28902051 attttaacttatgttataaaaatagcttatacataagcacttata 28902007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 440 - 496
Target Start/End: Complemental strand, 42420052 - 42419996
Alignment:
Q  440 ttgttttcagcttttttccataaactgtctagaaaagcttatgaaaatagcttatag 496  Q
    ||||||||||||  ||||||||| || || || | ||||||||||||||||||||||    
T  42420052 ttgttttcagctcatttccataagctatccaggatagcttatgaaaatagcttatag 42419996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 392 - 451
Target Start/End: Original strand, 44606079 - 44606136
Alignment:
Q  392 actgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagct 451  Q
    |||||||||||||  ||||| ||||| || |||||||||||||  |||||||||||||||    
T  44606079 actgtttggaagaacttatgaaaacaacttatgacatgtccat--aagttgttttcagct 44606136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 56; Significance: 7e-23; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 420 - 491
Target Start/End: Original strand, 30653371 - 30653442
Alignment:
Q  420 tcatgacatgtccataaaagttgttttcagcttttttccataaactgtctagaaaagcttatgaaaatagct 491  Q
    ||||||||||| |||||||| |||||||||||| ||||||||| ||||||||||||||||||||||||||||    
T  30653371 tcatgacatgttcataaaagctgttttcagcttatttccataagctgtctagaaaagcttatgaaaatagct 30653442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 377 - 558
Target Start/End: Complemental strand, 10391458 - 10391281
Alignment:
Q  377 ataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttccataaa-ctgtctagaaaa 475  Q
    |||| ||||||||| | |||||||||||||||||  |||||  | |||||||||| || |  |||||||||| ||| ||||| |||| || ||||| | |    
T  10391458 ataatcacttgtgagattgtttggaagagtttataaaaacactttatgacatgtctatta--gttgttttcaacttatttccttaaaactctctaggata 10391361  T
Q  476 gcttatgaaaatagcttatagcataagtatgacttcattttatcttttgttataaaaattgcttatacatcagcacttatatg 558  Q
    |||||| |||| |  ||||||| ||  |||||||| ||||||||||||||||||||||| |||||||| | ||||||||||||    
T  10391360 gcttataaaaacaaattatagctta--tatgactt-attttatcttttgttataaaaatagcttatacgtaagcacttatatg 10391281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 357 - 465
Target Start/End: Original strand, 2880480 - 2880587
Alignment:
Q  357 atttgaacttatatactgatataagcacttgtgaaactgttt-ggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttt 455  Q
    |||||||||||| ||||||  |||| ||| |||||||||||| ||| ||| |||||||||||||| |||| |||| |||  ||| |||||||||||| ||    
T  2880480 atttgaacttatctactgagctaagtactagtgaaactgtttgggaggagcttatggaaacagctaatgatatgttcat--aaggtgttttcagcttatt 2880577  T
Q  456 tccataaact 465  Q
    ||||||||||    
T  2880578 tccataaact 2880587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 377 - 436
Target Start/End: Original strand, 16380525 - 16380584
Alignment:
Q  377 ataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataa 436  Q
    ||||| |||||||||||| |||| |||||||||||||||||||| | |||||||||||||    
T  16380525 ataagtacttgtgaaactatttgcaagagtttatggaaacagcttacgacatgtccataa 16380584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 396 - 497
Target Start/End: Complemental strand, 16889832 - 16889733
Alignment:
Q  396 tttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttccataaactgtctagaaaagcttatgaaaatagcttata 495  Q
    |||||||||| ||||| |||||||| ||   ||||| ||||  ||||||||||| || |||||||||||| ||||| | |||||||||||| ||||||||    
T  16889832 tttggaagagattatgaaaacagcttatactatgtctataa--gttgttttcagattatttccataaactctctagcatagcttatgaaaacagcttata 16889735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 390 - 495
Target Start/End: Original strand, 41957418 - 41957521
Alignment:
Q  390 aaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttccataaactgtctagaaaagcttatgaaaatag 489  Q
    ||||| |||||||||| ||| |||||||||| |||||||||||||  |||||||||||| ||| ||| |||||  | || || | |||||||||||| ||    
T  41957418 aaactatttggaagagcttacggaaacagcttatgacatgtccat--aagttgttttcatcttattttcataagttctcaaggatagcttatgaaaacag 41957515  T
Q  490 cttata 495  Q
    ||||||    
T  41957516 cttata 41957521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 359 - 436
Target Start/End: Original strand, 38047815 - 38047892
Alignment:
Q  359 ttgaacttatatactgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataa 436  Q
    |||||||||| ||||  |||||| |||||||  ||||||||| |||| ||||||||||| || |||||||||||||||    
T  38047815 ttgaacttatctactattataagtacttgtgtgactgtttgggagagcttatggaaacaacttatgacatgtccataa 38047892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 377 - 471
Target Start/End: Original strand, 28586720 - 28586812
Alignment:
Q  377 ataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttccataaactgtctag 471  Q
    ||||||| |||||||||||||||| |||| ||||||||| |||| ||||||| ||| |  ||| |||||||||||| |||| |||| || |||||    
T  28586720 ataagcatttgtgaaactgtttgggagagcttatggaaatagcttatgacatatccgt--aagctgttttcagcttatttcgataagctctctag 28586812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 357 - 436
Target Start/End: Complemental strand, 32172789 - 32172710
Alignment:
Q  357 atttgaacttatatactgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataa 436  Q
    |||||| ||||||||||   |||||||||||||| |  |||||| |||| ||||||||||| || |||||||||||||||    
T  32172789 atttgagcttatatactagcataagcacttgtgagatagtttgggagagcttatggaaacaacttatgacatgtccataa 32172710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 382 - 436
Target Start/End: Complemental strand, 11457209 - 11457155
Alignment:
Q  382 cacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataa 436  Q
    ||||||||| ||||||| |||||| ||||||||||| || |||||||||||||||    
T  11457209 cacttgtgagactgttttgaagagcttatggaaacaacttatgacatgtccataa 11457155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 512 - 558
Target Start/End: Complemental strand, 11684397 - 11684351
Alignment:
Q  512 attttatcttttgttataaaaattgcttatacatcagcacttatatg 558  Q
    ||||||| ||||||||||||||| |||||||||| ||||||||||||    
T  11684397 attttatattttgttataaaaatagcttatacattagcacttatatg 11684351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 505 - 558
Target Start/End: Original strand, 7096216 - 7096269
Alignment:
Q  505 tgacttcattttatcttttgttataaaaattgcttatacatcagcacttatatg 558  Q
    |||||| |||||||||||||||||| |||| |||||||||| ||||||| ||||    
T  7096216 tgactttattttatcttttgttatagaaatagcttatacataagcacttgtatg 7096269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 377 - 465
Target Start/End: Original strand, 11700332 - 11700418
Alignment:
Q  377 ataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttccataaact 465  Q
    |||||||||||||| ||| ||  | |||||||||||||||| || |||||||||||||  ||| ||||||||| || ||| ||||||||    
T  11700332 ataagcacttgtgagactattgaggagagtttatggaaacaacttatgacatgtccat--aagctgttttcagattattttcataaact 11700418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 505 - 558
Target Start/End: Original strand, 20982224 - 20982277
Alignment:
Q  505 tgacttcattttatcttttgttataaaaattgcttatacatcagcacttatatg 558  Q
    |||||| |||||||| ||||||||| |||| |||||||||| ||||||||||||    
T  20982224 tgactttattttatcctttgttatagaaatagcttatacataagcacttatatg 20982277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 509 - 557
Target Start/End: Original strand, 3951887 - 3951935
Alignment:
Q  509 ttcattttatcttttgttataaaaattgcttatacatcagcacttatat 557  Q
    ||||||||||||||||||||| |||| |||||| ||| |||||||||||    
T  3951887 ttcattttatcttttgttatataaatagcttattcataagcacttatat 3951935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 357 - 465
Target Start/End: Original strand, 499665 - 499771
Alignment:
Q  357 atttgaacttatatactgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataa-aagttgttttcagcttttt 455  Q
    |||||| ||||  |||||| |||||||| ||| |  |||||||| |||  ||||| |||||||| |||||||||   ||| |||||||||||||||| ||    
T  499665 atttgagcttacctactgacataagcacctgttaggctgtttgggagaacttatgaaaacagcttatgacatgt---taacaagttgttttcagcttatt 499761  T
Q  456 tccataaact 465  Q
    ||||||||||    
T  499762 tccataaact 499771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 382 - 452
Target Start/End: Original strand, 13264064 - 13264132
Alignment:
Q  382 cacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagctt 452  Q
    |||||| || ||||||||||||||||||||||||||||| ||| ||| | |||  ||| ||||||||||||    
T  13264064 cacttgcgagactgtttggaagagtttatggaaacagcttatgccatattcat--aagctgttttcagctt 13264132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 365 - 411
Target Start/End: Original strand, 1084081 - 1084127
Alignment:
Q  365 ttatatactgatataagcacttgtgaaactgtttggaagagtttatg 411  Q
    |||| |||||| |||||||||||||||||||||||  ||||||||||    
T  1084081 ttatttactgacataagcacttgtgaaactgtttgagagagtttatg 1084127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 512 - 558
Target Start/End: Complemental strand, 13224403 - 13224357
Alignment:
Q  512 attttatcttttgttataaaaattgcttatacatcagcacttatatg 558  Q
    |||||||||||||||||| |||| |||||||||| ||||||| ||||    
T  13224403 attttatcttttgttatagaaatagcttatacataagcacttctatg 13224357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 512 - 558
Target Start/End: Complemental strand, 26516272 - 26516226
Alignment:
Q  512 attttatcttttgttataaaaattgcttatacatcagcacttatatg 558  Q
    ||||||||||||||| || |||| |||||||||| ||||||||||||    
T  26516272 attttatcttttgttttagaaatagcttatacataagcacttatatg 26516226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 512 - 570
Target Start/End: Complemental strand, 29588854 - 29588796
Alignment:
Q  512 attttatcttttgttataaaaattgcttatacatcagcacttatatgtaaagtgcttat 570  Q
    ||||||| |||||||||| |||| |||||||||| |||||||||||  |||||| ||||    
T  29588854 attttatattttgttatagaaatagcttatacataagcacttatataaaaagtgtttat 29588796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 382 - 420
Target Start/End: Complemental strand, 32191002 - 32190964
Alignment:
Q  382 cacttgtgaaactgtttggaagagtttatggaaacagct 420  Q
    ||||||| | |||||||||||||||||||||||||||||    
T  32191002 cacttgttagactgtttggaagagtttatggaaacagct 32190964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 505 - 559
Target Start/End: Original strand, 35135751 - 35135805
Alignment:
Q  505 tgacttcattttatcttttgttataaaaattgcttatacatcagcacttatatgt 559  Q
    |||||| |||||||||||||||||| ||||  ||||||||| | |||||||||||    
T  35135751 tgactttattttatcttttgttatagaaatatcttatacataaacacttatatgt 35135805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 393 - 462
Target Start/End: Original strand, 36774677 - 36774744
Alignment:
Q  393 ctgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttccataa 462  Q
    ||||||||||||| |||||||||| ||| |||||||||||   |||| || ||||||||| |||||||||    
T  36774677 ctgtttggaagagcttatggaaacggcttatgacatgtcc--taaagatggtttcagcttatttccataa 36774744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 505 - 542
Target Start/End: Complemental strand, 11615489 - 11615452
Alignment:
Q  505 tgacttcattttatcttttgttataaaaattgcttata 542  Q
    |||||| ||||||||||||||||||||||| |||||||    
T  11615489 tgactttattttatcttttgttataaaaatagcttata 11615452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 505 - 558
Target Start/End: Complemental strand, 24084879 - 24084826
Alignment:
Q  505 tgacttcattttatcttttgttataaaaattgcttatacatcagcacttatatg 558  Q
    |||||| |||||||| ||| | |||||||| |||||||||| ||||||||||||    
T  24084879 tgacttgattttatcgtttatcataaaaatagcttatacatgagcacttatatg 24084826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 505 - 558
Target Start/End: Original strand, 37063163 - 37063216
Alignment:
Q  505 tgacttcattttatcttttgttataaaaattgcttatacatcagcacttatatg 558  Q
    |||||| |||||||||||||||||| |||| | |||||||| |||| |||||||    
T  37063163 tgactttattttatcttttgttatagaaatagtttatacataagcatttatatg 37063216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 513 - 570
Target Start/End: Original strand, 38819672 - 38819729
Alignment:
Q  513 ttttatcttttgttataaaaattgcttatacatcagcacttatatgtaaagtgcttat 570  Q
    ||||||||||||||||| |||| || ||||||| ||| ||||||||  ||||||||||    
T  38819672 ttttatcttttgttatagaaatagcgtatacataagcccttatatgataagtgcttat 38819729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 399 - 497
Target Start/End: Original strand, 8651328 - 8651424
Alignment:
Q  399 ggaagagtttatggaaacagctcat-gacatgtccataaaagttgttttcagcttttttccataaactgtctagaaaagcttatgaaaatagcttatagc 497  Q
    ||||||| |||||||||||||| ||  ||||||||||  |||||||||||||| | ||||||||| ||  | |||| |||||||||||| || |||||||    
T  8651328 ggaagagcttatggaaacagcttataaacatgtccat--aagttgttttcagcatatttccataagct-cccagaatagcttatgaaaacagtttatagc 8651424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 371 - 462
Target Start/End: Original strand, 10280547 - 10280635
Alignment:
Q  371 actgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttccataa 462  Q
    ||||| ||||||||||||    ||||||| ||||  |||||||||||||| |||| ||||||||  |||||||| ||||||| |||||||||    
T  10280547 actgacataagcacttgttcggctgtttgaaagaacttatggaaacagcttatga-atgtccat--aagttgttatcagcttatttccataa 10280635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 364 - 436
Target Start/End: Original strand, 11095436 - 11095508
Alignment:
Q  364 cttatatactgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataa 436  Q
    ||||| |||||| |||| ||||||||| | ||||||  |||  || ||||||||||| |||||||||||||||    
T  11095436 cttatctactgacataaacacttgtgatattgtttgagagaacttgtggaaacagcttatgacatgtccataa 11095508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 507 - 555
Target Start/End: Complemental strand, 11835256 - 11835208
Alignment:
Q  507 acttcattttatcttttgttataaaaattgcttatacatcagcacttat 555  Q
    |||| ||||||||||||||||||||||| | |||||||| | |||||||    
T  11835256 actttattttatcttttgttataaaaatggtttatacataaacacttat 11835208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 357 - 448
Target Start/End: Complemental strand, 34205377 - 34205288
Alignment:
Q  357 atttgaacttatatactgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttca 448  Q
    |||||||||||| |||||| ||||||| || || |||| ||| | |||| ||||||||||| || ||| ||||| |||  ||||||||||||    
T  34205377 atttgaacttatttactgacataagcatttatggaactattttggagagcttatggaaacaacttatgtcatgttcat--aagttgttttca 34205288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 407 - 462
Target Start/End: Complemental strand, 35963327 - 35963274
Alignment:
Q  407 ttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttccataa 462  Q
    ||||||||| |||  |||||||||||||||  |||||||||||||| |||||||||    
T  35963327 ttatggaaatagcgtatgacatgtccataa--gttgttttcagcttatttccataa 35963274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 377 - 429
Target Start/End: Original strand, 38036013 - 38036065
Alignment:
Q  377 ataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatg 429  Q
    |||| ||||||||||||||||||| |||  |||||||| ||||| ||||||||    
T  38036013 ataaacacttgtgaaactgtttgggagaacttatggaaccagctaatgacatg 38036065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 505 - 557
Target Start/End: Complemental strand, 39128620 - 39128568
Alignment:
Q  505 tgacttcattttatcttttgttataaaaattgcttatacatcagcacttatat 557  Q
    |||||| |||||||||||||||||| || | |||||||||| ||||| |||||    
T  39128620 tgactttattttatcttttgttatagaattagcttatacataagcacatatat 39128568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 47; Significance: 2e-17; HSPs: 41)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 377 - 462
Target Start/End: Complemental strand, 43115172 - 43115089
Alignment:
Q  377 ataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttccataa 462  Q
    |||| ||||||||| | |||||||||||||||||||||||| || |||||||||||||  || ||||||||||||| |||||||||    
T  43115172 ataatcacttgtgagattgtttggaagagtttatggaaacaacttatgacatgtccat--aacttgttttcagcttatttccataa 43115089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 362 - 464
Target Start/End: Original strand, 27016389 - 27016488
Alignment:
Q  362 aacttatatactgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttccata 461  Q
    ||||||| |||||| ||||| |||| ||| |||||||  |||||||||||||||||||||||||||| ||  || || ||||||||||||| ||||||||    
T  27016389 aacttatctactga-ataagtacttatgagactgtttcaaagagtttatggaaacagctcatgacatatc--tataacttgttttcagcttatttccata 27016485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 359 - 437
Target Start/End: Complemental strand, 24624344 - 24624266
Alignment:
Q  359 ttgaacttatatactgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaa 437  Q
    |||||||||| |||| | || ||||||||| | |||||||||||||| ||||| |||||||| ||||||||||||||||    
T  24624344 ttgaacttatctactcacattagcacttgtaagactgtttggaagagcttatgaaaacagcttatgacatgtccataaa 24624266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 377 - 462
Target Start/End: Complemental strand, 37273250 - 37273167
Alignment:
Q  377 ataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttccataa 462  Q
    ||||||||| |||| ||||||||| |||| ||||||||||| || |||||||||||||  |||||||||||| ||| |||||||||    
T  37273250 ataagcactggtgagactgtttgggagagcttatggaaacaacttatgacatgtccat--aagttgttttcaacttatttccataa 37273167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 357 - 437
Target Start/End: Original strand, 21872229 - 21872309
Alignment:
Q  357 atttgaacttatatactgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaa 437  Q
    |||||| ||||| |||||| |||||||||||||| ||||||||||| || || || ||| |||| ||||||||||||||||    
T  21872229 atttgatcttatctactgacataagcacttgtgagactgtttggaaaagcttttgaaaatagcttatgacatgtccataaa 21872309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 357 - 419
Target Start/End: Complemental strand, 22667539 - 22667477
Alignment:
Q  357 atttgaacttatatactgatataagcacttgtgaaactgtttggaagagtttatggaaacagc 419  Q
    |||||| ||||| |||||| |||||||||||||| ||||||||  ||||||||||||||||||    
T  22667539 atttgagcttatctactgacataagcacttgtgagactgtttgagagagtttatggaaacagc 22667477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 357 - 419
Target Start/End: Complemental strand, 22724178 - 22724116
Alignment:
Q  357 atttgaacttatatactgatataagcacttgtgaaactgtttggaagagtttatggaaacagc 419  Q
    |||||| ||||| |||||| |||||||||||||| ||||||||  ||||||||||||||||||    
T  22724178 atttgagcttatctactgacataagcacttgtgagactgtttgagagagtttatggaaacagc 22724116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 359 - 486
Target Start/End: Original strand, 30923835 - 30923959
Alignment:
Q  359 ttgaacttatatactgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttcc 458  Q
    |||| ||||| || |||||||| ||||||||| |||||||   |||| | |||||||||||| |||||||||| ||||  | |||||||||||| ||||     
T  30923835 ttgagcttatttattgatataaacacttgtgagactgtttatgagagct-atggaaacagcttatgacatgtctataa--gctgttttcagcttatttct 30923931  T
Q  459 ataaactgtctagaaaagcttatgaaaa 486  Q
    ||||||| ||||| | || |||||||||    
T  30923932 ataaactctctaggataggttatgaaaa 30923959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 380 - 462
Target Start/End: Original strand, 11039296 - 11039376
Alignment:
Q  380 agcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttccataa 462  Q
    |||| |||||| |||||||| ||||| |||||||||||  | |||||||||||||  |||||||||||||||| | |||||||    
T  11039296 agcaattgtgagactgtttgaaagagcttatggaaacatattatgacatgtccat--aagttgttttcagcttatctccataa 11039376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 390 - 495
Target Start/End: Original strand, 1217767 - 1217870
Alignment:
Q  390 aaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttccataaactgtctagaaaagcttatgaaaatag 489  Q
    ||||| |||||||||| ||| |||||||||| |||||||||||||  |||||||||||| |||  || |||||  | || || | |||||||||||| ||    
T  1217767 aaactatttggaagagcttacggaaacagcttatgacatgtccat--aagttgttttcatcttactttcataagttctcaaggatagcttatgaaaacag 1217864  T
Q  490 cttata 495  Q
    ||||||    
T  1217865 cttata 1217870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 512 - 558
Target Start/End: Original strand, 16790452 - 16790498
Alignment:
Q  512 attttatcttttgttataaaaattgcttatacatcagcacttatatg 558  Q
    ||||||||| ||||||||||||| |||||||||| ||||||||||||    
T  16790452 attttatctgttgttataaaaatagcttatacataagcacttatatg 16790498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 437 - 558
Target Start/End: Complemental strand, 38462339 - 38462209
Alignment:
Q  437 aagttgttttcagcttttttccataaactgtctagaaaagcttatgaaaatagcttatagcata---------agtatgacttcattttatcttttgtta 527  Q
    |||||||||||||||| ||||||||| || ||| | | |||||||||||| || ||||||||||         ||| |||||| ||||||||||||| ||    
T  38462339 aagttgttttcagcttatttccataagctatcttggatagcttatgaaaacagtttatagcatatatgaaaacagtttgactttattttatcttttggta 38462240  T
Q  528 taaaaattgcttatacatcagcacttatatg 558  Q
    || |||| ||||||| || | ||||||||||    
T  38462239 tagaaatagcttataaataaacacttatatg 38462209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 512 - 570
Target Start/End: Complemental strand, 49739541 - 49739483
Alignment:
Q  512 attttatcttttgttataaaaattgcttatacatcagcacttatatgtaaagtgcttat 570  Q
    ||||||||||||| | ||||||| |||||||||||| |||||||||| |||| ||||||    
T  49739541 attttatcttttgatgtaaaaatagcttatacatcaccacttatatgaaaagcgcttat 49739483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 505 - 554
Target Start/End: Original strand, 20192695 - 20192744
Alignment:
Q  505 tgacttcattttatcttttgttataaaaattgcttatacatcagcactta 554  Q
    |||||| |||||||||||||||||| |||| |||||||||| ||||||||    
T  20192695 tgactttattttatcttttgttatataaatagcttatacataagcactta 20192744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 370 - 486
Target Start/End: Original strand, 39311626 - 39311740
Alignment:
Q  370 tactgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttccataaactgtct 469  Q
    |||||| |||||||||||||| ||| ||| | |||| |||||||||||| | |||| || |||| |||  || |||||| ||| |||||||||||| ||     
T  39311626 tactgacataagcacttgtgagactattttggagagcttatggaaacagtttatgatatttccacaaa--tttttttcatcttatttccataaactctcc 39311723  T
Q  470 agaaaagcttatgaaaa 486  Q
    || | ||||||||||||    
T  39311724 agtatagcttatgaaaa 39311740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 505 - 558
Target Start/End: Original strand, 41028940 - 41028993
Alignment:
Q  505 tgacttcattttatcttttgttataaaaattgcttatacatcagcacttatatg 558  Q
    |||||| ||||| |||||||||||| |||| |||||||||| ||||||||||||    
T  41028940 tgactttattttttcttttgttatagaaatagcttatacataagcacttatatg 41028993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 377 - 437
Target Start/End: Complemental strand, 22232948 - 22232889
Alignment:
Q  377 ataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaa 437  Q
    ||||||| |||||||||||||| || |||||||| |||||| || ||||||||||||||||    
T  22232948 ataagcatttgtgaaactgttttga-gagtttatagaaacaacttatgacatgtccataaa 22232889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 377 - 488
Target Start/End: Complemental strand, 26542653 - 26542544
Alignment:
Q  377 ataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttccataaactgtctagaaaag 476  Q
    ||||| |||||| | |||||||||||||| |||  |||||| || |||| ||||| ||||   ||||||||| ||| |||||||||||| || | || ||    
T  26542653 ataagtacttgtaagactgtttggaagagcttactgaaacaacttatgatatgtctataac--ttgttttcaacttatttccataaactctccataatag 26542556  T
Q  477 cttatgaaaata 488  Q
    ||||||||||||    
T  26542555 cttatgaaaata 26542544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 357 - 452
Target Start/End: Complemental strand, 41724348 - 41724255
Alignment:
Q  357 atttgaacttatatactgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagctt 452  Q
    |||||||||||| |||||| ||||| |||||| | || |||||  | |  ||||||||||| || |||||||||||||  ||||||||||||||||    
T  41724348 atttgaacttatctactgacataagtacttgtcagacagtttgtgaaaacttatggaaacaacttatgacatgtccat--aagttgttttcagctt 41724255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 512 - 558
Target Start/End: Complemental strand, 25964416 - 25964370
Alignment:
Q  512 attttatcttttgttataaaaattgcttatacatcagcacttatatg 558  Q
    ||||||||||||||||||||||| |||||||||  || |||||||||    
T  25964416 attttatcttttgttataaaaatagcttatacaaaagaacttatatg 25964370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 397 - 431
Target Start/End: Complemental strand, 28801361 - 28801327
Alignment:
Q  397 ttggaagagtttatggaaacagctcatgacatgtc 431  Q
    |||| ||||||||||||||||||||||||||||||    
T  28801361 ttgggagagtttatggaaacagctcatgacatgtc 28801327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 381 - 486
Target Start/End: Original strand, 36646340 - 36646443
Alignment:
Q  381 gcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttccataaactgtctagaaaagctta 480  Q
    |||||||| | ||| ||||| |||| ||||||||||  || ||| |||||||||||  | |||||||| ||| |||| ||||||| ||||| | ||||||    
T  36646340 gcacttgtaagactatttgggagagcttatggaaaccacttatggcatgtccataa--gctgttttcatcttatttctataaactctctaggatagctta 36646437  T
Q  481 tgaaaa 486  Q
    ||||||    
T  36646438 tgaaaa 36646443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 377 - 462
Target Start/End: Complemental strand, 42745154 - 42745071
Alignment:
Q  377 ataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttccataa 462  Q
    |||||||||||||| | | ||| ||||| |||||| ||||| || ||||||||| |||  |||||||||||| ||| |||||||||    
T  42745154 ataagcacttgtgatattatttagaagaatttatgtaaacaacttatgacatgttcat--aagttgttttcatcttatttccataa 42745071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 392 - 493
Target Start/End: Original strand, 54837003 - 54837102
Alignment:
Q  392 actgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttccataaactgtctagaaaagcttatgaaaatagct 491  Q
    ||||||||||||| |||||| |||||||| ||||||||| |||  || |||||||| |||| |||  |||| ||||| |  | |||||||||||||| ||    
T  54837003 actgtttggaagaatttatgaaaacagcttatgacatgttcat--aacttgttttccgcttatttttataagctgtccaagatagcttatgaaaataact 54837100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 505 - 558
Target Start/End: Original strand, 905059 - 905112
Alignment:
Q  505 tgacttcattttatcttttgttataaaaattgcttatacatcagcacttatatg 558  Q
    |||||| |||||||||||||||||| |||| |||||||| | ||| ||||||||    
T  905059 tgactttattttatcttttgttatagaaatagcttatacttaagcgcttatatg 905112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 377 - 457
Target Start/End: Original strand, 20194987 - 20195065
Alignment:
Q  377 ataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttc 457  Q
    ||||||| |||||| ||||||||  |||| ||||| |||||| | ||||||| | ||  ||||||||||||||||||||||    
T  20194987 ataagcagttgtgagactgtttgtgagagcttatgaaaacagtttatgacatattca--aaagttgttttcagcttttttc 20195065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 364 - 417
Target Start/End: Original strand, 24158457 - 24158510
Alignment:
Q  364 cttatatactgatataagcacttgtgaaactgtttggaagagtttatggaaaca 417  Q
    ||||| |||||| ||||| |||||||||||||||||  |||| |||||||||||    
T  24158457 cttatctactgacataagtacttgtgaaactgtttgcgagagcttatggaaaca 24158510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 465
Target Start/End: Original strand, 27290871 - 27290941
Alignment:
Q  393 ctgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttccataaact 465  Q
    |||||| |||||| ||||| |||||||| |||||||| ||||||  | |||||||||||| ||||||| ||||    
T  27290871 ctgtttcgaagagcttatgaaaacagcttatgacatgcccataa--gctgttttcagcttatttccatgaact 27290941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 512 - 545
Target Start/End: Original strand, 30669066 - 30669099
Alignment:
Q  512 attttatcttttgttataaaaattgcttatacat 545  Q
    ||||||||||||||||||||||| ||||||||||    
T  30669066 attttatcttttgttataaaaatagcttatacat 30669099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 507 - 556
Target Start/End: Complemental strand, 31364880 - 31364831
Alignment:
Q  507 acttcattttatcttttgttataaaaattgcttatacatcagcacttata 556  Q
    |||| |||||| |||||||||||||||| ||||||| || ||||||||||    
T  31364880 actttattttaccttttgttataaaaatagcttatatattagcacttata 31364831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 380 - 460
Target Start/End: Complemental strand, 36200209 - 36200131
Alignment:
Q  380 agcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttccat 460  Q
    ||||||||||| | |||| |  ||||||| || ||||| || |||||||||||||  |||||||||||||||| |||||||    
T  36200209 agcacttgtgagaatgttggagagagtttttgtaaacaacttatgacatgtccat--aagttgttttcagcttatttccat 36200131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 357 - 452
Target Start/End: Original strand, 42817156 - 42817249
Alignment:
Q  357 atttgaacttatatactgatataagcacttgtgaaac-tgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagctt 452  Q
    |||||||||||| |||||   |||| ||||||||| | ||||||  |||| |||||||||||||  |||||||||||||  ||||||||||||||||    
T  42817156 atttgaacttatctactggcgtaag-acttgtgaagcctgtttgagagagcttatggaaacagcatatgacatgtccat--aagttgttttcagctt 42817249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 505 - 558
Target Start/End: Original strand, 44374733 - 44374786
Alignment:
Q  505 tgacttcattttatcttttgttataaaaattgcttatacatcagcacttatatg 558  Q
    |||||| |||||||||||||||| | | || |||||||||| ||||||||||||    
T  44374733 tgactttattttatcttttgttaaagatatagcttatacataagcacttatatg 44374786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 505 - 554
Target Start/End: Original strand, 49546576 - 49546625
Alignment:
Q  505 tgacttcattttatcttttgttataaaaattgcttatacatcagcactta 554  Q
    |||||| |||||||||||||||||||||||  |||| |||| ||||||||    
T  49546576 tgactttattttatcttttgttataaaaatatcttacacataagcactta 49546625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 516 - 553
Target Start/End: Original strand, 52413221 - 52413258
Alignment:
Q  516 tatcttttgttataaaaattgcttatacatcagcactt 553  Q
    ||||||||||||||||||| |||||||||| |||||||    
T  52413221 tatcttttgttataaaaatagcttatacataagcactt 52413258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 505 - 545
Target Start/End: Complemental strand, 1395652 - 1395612
Alignment:
Q  505 tgacttcattttatcttttgttataaaaattgcttatacat 545  Q
    |||||| |||||||||||||||||| |||| ||||||||||    
T  1395652 tgactttattttatcttttgttatagaaatagcttatacat 1395612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 365 - 433
Target Start/End: Complemental strand, 8933915 - 8933847
Alignment:
Q  365 ttatatactgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtcca 433  Q
    ||||||||||  |||||||  ||||| ||||||||| |||| ||| ||||| |||| ||||||||||||    
T  8933915 ttatatactggaataagcatgtgtgagactgtttgggagagattaaggaaatagcttatgacatgtcca 8933847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 508 - 556
Target Start/End: Complemental strand, 22667403 - 22667355
Alignment:
Q  508 cttcattttatcttttgttataaaaattgcttatacatcagcacttata 556  Q
    |||||||||||||||||||||| || | ||||| |||| ||||||||||    
T  22667403 cttcattttatcttttgttatagaagtagcttaaacataagcacttata 22667355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 508 - 556
Target Start/End: Complemental strand, 22724042 - 22723994
Alignment:
Q  508 cttcattttatcttttgttataaaaattgcttatacatcagcacttata 556  Q
    |||||||||||||||||||||| || | ||||| |||| ||||||||||    
T  22724042 cttcattttatcttttgttatagaagtagcttaaacataagcacttata 22723994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 505 - 545
Target Start/End: Original strand, 32555070 - 32555110
Alignment:
Q  505 tgacttcattttatcttttgttataaaaattgcttatacat 545  Q
    |||||| ||||||||||||||| ||| ||||||||||||||    
T  32555070 tgactttattttatcttttgttgtaataattgcttatacat 32555110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 390 - 497
Target Start/End: Original strand, 34254775 - 34254880
Alignment:
Q  390 aaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttccataaactgtctagaaaagcttatgaaaatag 489  Q
    ||||||||||||| || ||||| |||||| | ||||||| |||||||  | |  ||||||||| ||| |||||  | || |||| |||||||||||||||    
T  34254775 aaactgtttggaaaagcttatgaaaacagtttatgacatatccataa--gctactttcagcttatttacataagttctccagaatagcttatgaaaatag 34254872  T
Q  490 cttatagc 497  Q
     |||||||    
T  34254873 tttatagc 34254880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 46; Significance: 6e-17; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 365 - 497
Target Start/End: Original strand, 39551151 - 39551281
Alignment:
Q  365 ttatatactgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttccataaac 464  Q
    |||| ||| |||||||||| |||||||||||||||| ||| |||||||||||| || |||||||||||  ||||| |||||| | ||| |||  |||| |    
T  39551151 ttatctacggatataagcatttgtgaaactgtttgggagaatttatggaaacaacttatgacatgtcc--aaaagctgtttttaacttatttttataagc 39551248  T
Q  465 tgtctagaaaagcttatgaaaatagcttatagc 497  Q
    | || || |||||||||||||| | ||||||||    
T  39551249 tctccaggaaagcttatgaaaacaacttatagc 39551281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 377 - 496
Target Start/End: Original strand, 30191095 - 30191212
Alignment:
Q  377 ataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttccataaactgtctagaaaag 476  Q
    |||||||||||| | ||||||||| |||| ||||||||||| || ||||||||| |  |||| ||||||||||||| |||||||||||  |  || | ||    
T  30191095 ataagcacttgttagactgtttgggagagcttatggaaacaacttatgacatgttc--aaaacttgttttcagcttatttccataaacatttcaggatag 30191192  T
Q  477 cttatgaaaatagcttatag 496  Q
    ||||| ||||||||||||||    
T  30191193 cttatcaaaatagcttatag 30191212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 377 - 462
Target Start/End: Original strand, 13000378 - 13000461
Alignment:
Q  377 ataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttccataa 462  Q
    |||||||||||||| ||| |||| |||||||||||| |||| || |||||||||||  | |||||||||||||||| |||||||||    
T  13000378 ataagcacttgtgagactatttgcaagagtttatggtaacaacttatgacatgtcc--acaagttgttttcagcttatttccataa 13000461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 371 - 433
Target Start/End: Complemental strand, 26410402 - 26410340
Alignment:
Q  371 actgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtcca 433  Q
    ||||| |||||||||| ||| |||| |||| |||| |||||||||||||||||||||||||||    
T  26410402 actgacataagcacttctgagactgcttgggagagcttatggaaacagctcatgacatgtcca 26410340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 437 - 495
Target Start/End: Original strand, 30277257 - 30277315
Alignment:
Q  437 aagttgttttcagcttttttccataaactgtctagaaaagcttatgaaaatagcttata 495  Q
    |||||||||||||||| |||||||||||| ||||| | |||||||||||| ||||||||    
T  30277257 aagttgttttcagcttatttccataaactctctaggatagcttatgaaaacagcttata 30277315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 394 - 486
Target Start/End: Complemental strand, 10722723 - 10722633
Alignment:
Q  394 tgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttccataaactgtctagaaaagcttatgaaaa 486  Q
    ||||||| ||| ||||||||||||||| ||||||| |||||  | |||||||| ||||| ||||||| | || ||||||| ||||||||||||    
T  10722723 tgtttgggagaatttatggaaacagcttatgacatctccat--aggttgtttttagcttatttccatcagctctctagaacagcttatgaaaa 10722633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 377 - 497
Target Start/End: Original strand, 28769293 - 28769411
Alignment:
Q  377 ataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttccataaactgtctagaaaag 476  Q
    |||||||||||||| | | ||||  |||| || || ||| |||  |||| ||||||||||  |||||||||||||| |||||||||||| || | || ||    
T  28769293 ataagcacttgtgagattatttgagagagcttgtgtaaatagcatatgatatgtccataa--gttgttttcagcttatttccataaactctccaaaatag 28769390  T
Q  477 cttatgaaaatagcttatagc 497  Q
    |||||||||| ||||||||||    
T  28769391 cttatgaaaacagcttatagc 28769411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 377 - 495
Target Start/End: Original strand, 11569411 - 11569527
Alignment:
Q  377 ataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttccataaactgtctagaaaag 476  Q
    |||| ||||||||| |||||||   |||| |||||||||||||| ||||||||| |||  |||||||||||||||| ||| || || || || |  | ||    
T  11569411 ataaccacttgtgagactgtttaagagagcttatggaaacagcttatgacatgtacat--aagttgttttcagcttattttcaaaatctctccatgatag 11569508  T
Q  477 cttatgaaaatagcttata 495  Q
    |||||||||| ||||||||    
T  11569509 cttatgaaaacagcttata 11569527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 357 - 418
Target Start/End: Original strand, 2364394 - 2364455
Alignment:
Q  357 atttgaacttatatactgatataagcacttgtgaaactgtttggaagagtttatggaaacag 418  Q
    |||||||||||| | |||| ||||| |||||||| |||||||||||||| ||||| ||||||    
T  2364394 atttgaacttatcttctgacataagtacttgtgagactgtttggaagagattatgaaaacag 2364455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 401 - 497
Target Start/End: Complemental strand, 8062421 - 8062327
Alignment:
Q  401 aagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttccataaactgtctagaaaagcttatgaaaatagcttatagc 497  Q
    |||||||||||||||||| | |  || ||||||||| |  |||||||||||| ||||||||| || ||||  | |||||||||||| ||||||||||    
T  8062421 aagagtttatggaaacagtttacaacgtgtccataaga--tgttttcagcttatttccataatctctctaagatagcttatgaaaacagcttatagc 8062327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 437 - 523
Target Start/End: Original strand, 10079082 - 10079170
Alignment:
Q  437 aagttgttttcagcttttttccataaactgtctagaaaagcttatgaaaatagcttatagcata--agtatgacttcattttatctttt 523  Q
    |||||||||| ||||| |||||||||||| || |||| |||| ||||||| ||||||||  | |  ||| |||||||||||||||||||    
T  10079082 aagttgttttaagcttctttccataaactttccagaatagctcatgaaaacagcttatacgaaaacagtttgacttcattttatctttt 10079170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 505 - 558
Target Start/End: Complemental strand, 14482183 - 14482130
Alignment:
Q  505 tgacttcattttatcttttgttataaaaattgcttatacatcagcacttatatg 558  Q
    |||||| |||||||||||||||||| |||| | |||||||| ||||||||||||    
T  14482183 tgactttattttatcttttgttatagaaatagtttatacataagcacttatatg 14482130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 357 - 418
Target Start/End: Complemental strand, 24326167 - 24326106
Alignment:
Q  357 atttgaacttatatactgatataagcacttgtgaaactgtttggaagagtttatggaaacag 418  Q
    |||||| ||||| |||||  |||||||||||||| ||||||||| |||| ||||||||||||    
T  24326167 atttgagcttatctactggcataagcacttgtgagactgtttgggagagcttatggaaacag 24326106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 397 - 465
Target Start/End: Original strand, 25869240 - 25869306
Alignment:
Q  397 ttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttccataaact 465  Q
    |||| ||||| |||||||| | || |||||||||||||||  |||||||||||||| ||||||||||||    
T  25869240 ttgggagagtctatggaaataacttatgacatgtccataa--gttgttttcagcttatttccataaact 25869306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 377 - 497
Target Start/End: Complemental strand, 30389215 - 30389097
Alignment:
Q  377 ataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttccataaactgtctagaaaag 476  Q
    ||||| ||| |||| ||||||||  ||||  |||| ||| |||| ||||||||| |||||  |||||||||||||| ||| |||||  | ||||| ||||    
T  30389215 ataagtactcgtgacactgtttgagagagcatatgaaaatagctaatgacatgttcataa--gttgttttcagcttattttcataagttctctaggaaag 30389118  T
Q  477 cttatgaaaatagcttatagc 497  Q
    |||||||||| ||| ||||||    
T  30389117 cttatgaaaacagcgtatagc 30389097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 394 - 489
Target Start/End: Original strand, 9540967 - 9541060
Alignment:
Q  394 tgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttccataaactgtctagaaaagcttatgaaaatag 489  Q
    ||||||| |||| ||||||||||| || |||||||||||||  || |||| |||||||| ||| || || || ||||| | |||||||||||||||    
T  9540967 tgtttgggagagcttatggaaacatcttatgacatgtccat--aatttgtgttcagcttattttcaaaagctctctaggatagcttatgaaaatag 9541060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 364 - 495
Target Start/End: Complemental strand, 11415283 - 11415154
Alignment:
Q  364 cttatatactgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttccataaa 463  Q
    ||||| |||| | ||||| |||||||| | |||||   ||||||||||||||||||| || ||||||||||  ||| | || ||||||| ||| || |||    
T  11415283 cttatttactaacataagtacttgtgagattgttttagagagtttatggaaacagcttataacatgtccat--aagctattctcagcttattttcacaaa 11415186  T
Q  464 ctgtctagaaaagcttatgaaaatagcttata 495  Q
    || ||||| | |||||||||||| ||| ||||    
T  11415185 ctctctaggatagcttatgaaaacagcgtata 11415154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 357 - 497
Target Start/End: Complemental strand, 12361330 - 12361190
Alignment:
Q  357 atttgaacttatatactgatataagcacttgtgaaactgtttggaagag--tttatggaaacagctcatgacatgtccataaaagttgttttcagctttt 454  Q
    |||||||||||| |||||||||||| |||||| | ||| ||||  ||||   |||| |||| |||| |||||||||||||  ||| |||||||| ||| |    
T  12361330 atttgaacttatctactgatataagtacttgttagactctttgagagagatcttatagaaatagcttatgacatgtccat--aagctgttttcaacttat 12361233  T
Q  455 ttccataaactgtctagaaaagcttatgaaaatagcttatagc 497  Q
    |||||| | || ||  ||| | |||||||||| ||||||||||    
T  12361232 ttccattagctctcctgaataacttatgaaaacagcttatagc 12361190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 441 - 497
Target Start/End: Complemental strand, 31705139 - 31705083
Alignment:
Q  441 tgttttcagcttttttccataaactgtctagaaaagcttatgaaaatagcttatagc 497  Q
    |||||||||||| |||||||||||| || || | |||||||||||| ||||||||||    
T  31705139 tgttttcagcttatttccataaactctcaaggacagcttatgaaaacagcttatagc 31705083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 384 - 458
Target Start/End: Original strand, 4055577 - 4055649
Alignment:
Q  384 cttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttcc 458  Q
    ||||| ||||||||||| ||||||||| |||| | || ||||||||||||||||   |||||||||||| |||||    
T  4055577 cttgtaaaactgtttgggagagtttatagaaataacttatgacatgtccataaa--ctgttttcagcttatttcc 4055649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 513 - 579
Target Start/End: Original strand, 8823490 - 8823557
Alignment:
Q  513 ttttatcttttgttataaaaattgcttatacatcagcacttatatg-taaagtgcttatcttataagt 579  Q
    ||||||||||||||||| |||| ||||||| || |||||||| ||| ||||| ||||||| |||||||    
T  8823490 ttttatcttttgttatagaaatggcttatatataagcacttaaatgataaagagcttatcatataagt 8823557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 389 - 428
Target Start/End: Original strand, 9562228 - 9562267
Alignment:
Q  389 gaaactgtttggaagagtttatggaaacagctcatgacat 428  Q
    ||||||||||||||||| ||||| ||||||||||||||||    
T  9562228 gaaactgtttggaagagcttatgaaaacagctcatgacat 9562267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 377 - 436
Target Start/End: Original strand, 29169890 - 29169949
Alignment:
Q  377 ataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataa 436  Q
    |||||||||||||||| ||||||| |||| ||||| |||||||  ||||||| |||||||    
T  29169890 ataagcacttgtgaaattgtttgggagagcttatgaaaacagcatatgacatatccataa 29169949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 377 - 471
Target Start/End: Original strand, 41606857 - 41606949
Alignment:
Q  377 ataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttccataaactgtctag 471  Q
    ||||||| ||||||||| |||||| |||   || | |||||||| ||||||||| ||  ||||||||||||||||| ||||||||| || |||||    
T  41606857 ataagcatttgtgaaacagtttgggagaaactacgaaaacagcttatgacatgttca--aaagttgttttcagcttatttccataagctctctag 41606949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 487
Target Start/End: Complemental strand, 26479895 - 26479793
Alignment:
Q  383 acttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttccataaactgtctagaaaagcttatg 482  Q
    |||||||||||| ||||  |||| ||||||||||| || ||| ||||||  || ||||| |||||||| | ||||||||| || || |||| || |||||    
T  26479895 acttgtgaaactatttgcgagagcttatggaaacaacttatgtcatgtc--tataagtttttttcagcgtatttccataagctctccagaataggttatg 26479798  T
Q  483 aaaat 487  Q
    |||||    
T  26479797 aaaat 26479793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 377 - 434
Target Start/End: Complemental strand, 34770984 - 34770927
Alignment:
Q  377 ataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccat 434  Q
    |||||||||||||||||||||||  |||   |||| |||||||| |||||||||||||    
T  34770984 ataagcacttgtgaaactgtttgagagatcctatgaaaacagcttatgacatgtccat 34770927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 443 - 492
Target Start/End: Original strand, 39268522 - 39268571
Alignment:
Q  443 ttttcagcttttttccataaactgtctagaaaagcttatgaaaatagctt 492  Q
    ||||||| || ||||||||| || |||||||||||||||||||| |||||    
T  39268522 ttttcagtttatttccataagctctctagaaaagcttatgaaaacagctt 39268571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 505 - 558
Target Start/End: Complemental strand, 40356852 - 40356799
Alignment:
Q  505 tgacttcattttatcttttgttataaaaattgcttatacatcagcacttatatg 558  Q
    |||||| |||||||||||| ||||| |||| ||||||| || ||||||||||||    
T  40356852 tgactttattttatcttttattatataaatagcttatagataagcacttatatg 40356799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 507 - 556
Target Start/End: Complemental strand, 42597380 - 42597331
Alignment:
Q  507 acttcattttatcttttgttataaaaattgcttatacatcagcacttata 556  Q
    |||| |||||||||||||||||| |||| |||||||||| || |||||||    
T  42597380 actttattttatcttttgttatagaaatagcttatacataagtacttata 42597331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 357 - 417
Target Start/End: Complemental strand, 778525 - 778465
Alignment:
Q  357 atttgaacttatatactgatataagcacttgtgaaactgtttggaagagtttatggaaaca 417  Q
    ||||| |||||| |||||| |||||||||||||| |||||||| ||||  ||||| |||||    
T  778525 atttgtacttatttactgaaataagcacttgtgagactgtttgcaagaacttatgaaaaca 778465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 506 - 558
Target Start/End: Complemental strand, 5226582 - 5226530
Alignment:
Q  506 gacttcattttatcttttgttataaaaattgcttatacatcagcacttatatg 558  Q
    ||||| |||||||||||||||||  |||||| |||||||| | ||||||||||    
T  5226582 gacttgattttatcttttgttattgaaattgtttatacataaacacttatatg 5226530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 512 - 556
Target Start/End: Original strand, 11569555 - 11569599
Alignment:
Q  512 attttatcttttgttataaaaattgcttatacatcagcacttata 556  Q
    ||||||||||||||||||||||| |  ||| ||||||||||||||    
T  11569555 attttatcttttgttataaaaatagactatgcatcagcacttata 11569599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 507 - 555
Target Start/End: Complemental strand, 26215475 - 26215427
Alignment:
Q  507 acttcattttatcttttgttataaaaattgcttatacatcagcacttat 555  Q
    |||| |||||||||||||||||| |||| |||||||||| ||| |||||    
T  26215475 actttattttatcttttgttatagaaatagcttatacataagcgcttat 26215427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 505 - 545
Target Start/End: Original strand, 34080355 - 34080395
Alignment:
Q  505 tgacttcattttatcttttgttataaaaattgcttatacat 545  Q
    ||||||||||||||||||||||| | |||| ||||||||||    
T  34080355 tgacttcattttatcttttgttaaagaaatagcttatacat 34080395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 360 - 404
Target Start/End: Original strand, 37353109 - 37353153
Alignment:
Q  360 tgaacttatatactgatataagcacttgtgaaactgtttggaaga 404  Q
    ||||| ||| |||||| |||||||||||||| |||||||||||||    
T  37353109 tgaacctatctactgacataagcacttgtgagactgtttggaaga 37353153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 357 - 437
Target Start/End: Original strand, 39881655 - 39881735
Alignment:
Q  357 atttgaacttatatactgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaa 437  Q
    |||||||||||| || ||  |||| ||||||||| | |||||||||||| || || ||| |||| ||||||||| ||||||    
T  39881655 atttgaacttatctattggcataaacacttgtgagattgtttggaagagcttgtgaaaatagcttatgacatgttcataaa 39881735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 386 - 465
Target Start/End: Original strand, 42370324 - 42370401
Alignment:
Q  386 tgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttccataaact 465  Q
    ||||||||||||||| | |||||||| ||| |||  ||||||||||  || ||  |||||||||||| ||||||||||||    
T  42370324 tgtgaaactgtttgggaaagtttatgaaaatagcgtatgacatgtc--tacaaactgttttcagcttatttccataaact 42370401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 46; Significance: 6e-17; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 358 - 462
Target Start/End: Complemental strand, 39345606 - 39345504
Alignment:
Q  358 tttgaacttatatactgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttc 457  Q
    ||||||||||| |||||  ||||  |||||||| ||||||||| |||||| |||||||||| | |||||||||||||  |||||| ||||||||| ||||    
T  39345606 tttgaacttatctactggaataattacttgtgagactgtttggtagagttcatggaaacagtttatgacatgtccat--aagttgctttcagcttatttc 39345509  T
Q  458 cataa 462  Q
    |||||    
T  39345508 cataa 39345504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 357 - 462
Target Start/End: Original strand, 48157054 - 48157157
Alignment:
Q  357 atttgaacttatatactgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagctttttt 456  Q
    |||||| ||||| ||||||| |||||| |||||| ||||||||| |||| |||| |||||| || ||| |||||||||  ||| |||||||||||| |||    
T  48157054 atttgagcttatttactgatttaagcatttgtgagactgtttgggagagcttatagaaacaacttatgccatgtccat--aagctgttttcagcttattt 48157151  T
Q  457 ccataa 462  Q
    ||||||    
T  48157152 ccataa 48157157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 377 - 465
Target Start/End: Complemental strand, 33894743 - 33894657
Alignment:
Q  377 ataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttccataaact 465  Q
    |||||||||||||| ||||||||  |||| ||||| |||||||  |||||||||||||  |||||||||||||||| |||| |||||||    
T  33894743 ataagcacttgtgagactgtttgtgagagcttatgaaaacagcatatgacatgtccat--aagttgttttcagcttatttcaataaact 33894657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 357 - 534
Target Start/End: Original strand, 46281076 - 46281249
Alignment:
Q  357 atttgaacttatatactgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagctttttt 456  Q
    |||||||||||| |||| | |||| ||||| |||   |||||| ||||||||| ||||||| || ||| |||||| |||||  ||||||||||||| |||    
T  46281076 atttgaacttatctactaacataaacacttttgag--tgtttgaaagagtttacggaaacaacttatgccatgtctataaa--ttgttttcagcttattt 46281171  T
Q  457 ccataaactgtctagaaaagcttatgaaaatagcttatagcataagtatgacttcattttatcttttgttataaaaat 534  Q
      |||| |  || |||| ||||||| |||| |||||||||| ||  | |||||| ||||||| |||||||||| ||||    
T  46281172 atataagccctccagaatagcttataaaaacagcttatagcctatatttgactttattttattttttgttatagaaat 46281249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 358 - 495
Target Start/End: Complemental strand, 39334328 - 39334193
Alignment:
Q  358 tttgaacttatatactgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttc 457  Q
    ||||||||||| |||||  ||||  ||| |||| ||||||||| ||||||||||||||||  | |||||||||||||  ||||||  |||||||| ||||    
T  39334328 tttgaacttatctactggaataattactcgtgagactgtttggtagagtttatggaaacaatttatgacatgtccat--aagttgcattcagcttatttc 39334231  T
Q  458 cataaactgtctagaaaagcttatgaaaatagcttata 495  Q
    ||||| ||  | || | ||||| |||||| ||||||||    
T  39334230 cataagctcgccaggatagcttttgaaaacagcttata 39334193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 376 - 437
Target Start/End: Original strand, 12834915 - 12834976
Alignment:
Q  376 tataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaa 437  Q
    ||||||||||| ||| |||| |||| |||| |||||||||||||| ||||||||||||||||    
T  12834915 tataagcacttctgagactgattggtagagattatggaaacagcttatgacatgtccataaa 12834976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 357 - 558
Target Start/End: Original strand, 3610674 - 3610882
Alignment:
Q  357 atttgaacttatatactgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagctttttt 456  Q
    |||||| ||||| |||||   ||| ||||||||| ||| ||||| | |  |||||||||||||| |||||||||||||||   ||  ||||||||| |||    
T  3610674 atttgagcttatctactggcctaaccacttgtgatactttttgggaaaccttatggaaacagctaatgacatgtccataagcctt--tttcagcttattt 3610771  T
Q  457 ccataaactgtctagaaaagcttatgaaaatagcttatagcata---------agtatgacttcattttatcttttgttataaaaattgcttatacatca 547  Q
    | |||| || ||||| | || ||| ||||| | |||||||| ||         ||| || ||||||||||||||||||| || |||| |||||||||| |    
T  3610772 ctataagctctctaggatagtttacgaaaacaacttatagcttataccaaaacagtttgccttcattttatcttttgttgtagaaatagcttatacataa 3610871  T
Q  548 gcacttatatg 558  Q
    |||||||||||    
T  3610872 gcacttatatg 3610882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 377 - 462
Target Start/End: Complemental strand, 20553219 - 20553136
Alignment:
Q  377 ataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttccataa 462  Q
    |||||||||||||| ||||||  | |||| |||||||||||||| | ||||||| |||  ||||||||||||| || |||||||||    
T  20553219 ataagcacttgtgagactgttcaggagagcttatggaaacagcttacgacatgttcat--aagttgttttcagattatttccataa 20553136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 505 - 554
Target Start/End: Complemental strand, 5276205 - 5276156
Alignment:
Q  505 tgacttcattttatcttttgttataaaaattgcttatacatcagcactta 554  Q
    |||||| || |||||||||||||||||||| |||||||||| ||||||||    
T  5276205 tgactttatgttatcttttgttataaaaatagcttatacataagcactta 5276156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 359 - 487
Target Start/End: Original strand, 12234825 - 12234951
Alignment:
Q  359 ttgaacttatatactgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttcc 458  Q
    |||| ||||| |||||  || ||||| ||||| |||| |||||| || |||| |||||| || |||||||||| ||||  | |||||||||||| |||||    
T  12234825 ttgagcttatctactggcattagcacgtgtgagactgcttggaatagcttatagaaacaacttatgacatgtctataa--gctgttttcagcttatttcc 12234922  T
Q  459 ataaactgtctagaaaagcttatgaaaat 487  Q
    |||| || ||||| |||||| || |||||    
T  12234923 ataagctctctaggaaagctcataaaaat 12234951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 357 - 457
Target Start/End: Original strand, 36598290 - 36598388
Alignment:
Q  357 atttgaacttatatactgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagctttttt 456  Q
    |||||||||||  |||||| ||||||| |||||| | ||||||  |||| ||||||||||| || ||||||||| |||  ||| |||||||||||| |||    
T  36598290 atttgaacttaactactgacataagcaattgtgagattgtttgagagagcttatggaaacatcttatgacatgttcat--aagctgttttcagcttattt 36598387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 358 - 462
Target Start/End: Complemental strand, 39360158 - 39360056
Alignment:
Q  358 tttgaacttatatactgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttc 457  Q
    ||||||||||| |||||  ||||  ||| |||| ||||||||  |||||||||||||||| || ||||||| |||||  |||||| ||||||||| ||||    
T  39360158 tttgaacttatctactggaataattactcgtgagactgtttgatagagtttatggaaacaacttatgacatatccat--aagttgctttcagcttatttc 39360061  T
Q  458 cataa 462  Q
     ||||    
T  39360060 aataa 39360056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 357 - 437
Target Start/End: Complemental strand, 30751655 - 30751575
Alignment:
Q  357 atttgaacttatatactgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaa 437  Q
    |||| ||||||| |||||| |||||||||||||  ||||||||| |||| |||| ||||||| | ||  ||||||||||||    
T  30751655 atttaaacttatctactgacataagcacttgtgcgactgtttgggagagcttatagaaacagtttatagcatgtccataaa 30751575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 361 - 495
Target Start/End: Complemental strand, 3468746 - 3468614
Alignment:
Q  361 gaacttatatactgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttccat 460  Q
    |||||||| |||| | |||| ||||| ||| ||||||| | ||||||  |||||||| || |||||||||||||  ||||||||| || ||| ||||||     
T  3468746 gaacttatctactaaaataaacacttttgagactgtttcggagagttgttggaaacaactaatgacatgtccat--aagttgtttccaacttatttccac 3468649  T
Q  461 aaactgtctagaaaagcttatgaaaatagcttata 495  Q
    ||  | ||||| | || ||||||||| ||||||||    
T  3468648 aagttctctaggatagattatgaaaaaagcttata 3468614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 357 - 428
Target Start/End: Original strand, 27121528 - 27121599
Alignment:
Q  357 atttgaacttatatactgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacat 428  Q
    |||||| ||||| |||| |||||||||  ||||| | ||||||| |||||||||||||| |||| |||||||    
T  27121528 atttgagcttatttactaatataagcatctgtgagattgtttgggagagtttatggaaatagcttatgacat 27121599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 377 - 435
Target Start/End: Original strand, 7453351 - 7453409
Alignment:
Q  377 ataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccata 435  Q
    |||||||||||||||||||||||  ||||  |||||||||| || || |||||||||||    
T  7453351 ataagcacttgtgaaactgtttgagagagcatatggaaacatcttattacatgtccata 7453409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 512 - 558
Target Start/End: Complemental strand, 7513608 - 7513562
Alignment:
Q  512 attttatcttttgttataaaaattgcttatacatcagcacttatatg 558  Q
    ||||||||||||||  ||||||| |||||||||| ||||||||||||    
T  7513608 attttatcttttgtcttaaaaatagcttatacataagcacttatatg 7513562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 512 - 558
Target Start/End: Complemental strand, 8445260 - 8445214
Alignment:
Q  512 attttatcttttgttataaaaattgcttatacatcagcacttatatg 558  Q
    ||||||||||||||||||||||| ||||||| |  ||||||||||||    
T  8445260 attttatcttttgttataaaaatagcttataaacaagcacttatatg 8445214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 512 - 558
Target Start/End: Complemental strand, 24973918 - 24973872
Alignment:
Q  512 attttatcttttgttataaaaattgcttatacatcagcacttatatg 558  Q
    |||||||||||||||||| |||| |||| ||||| ||||||||||||    
T  24973918 attttatcttttgttatagaaatagcttttacataagcacttatatg 24973872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 512 - 558
Target Start/End: Complemental strand, 24975878 - 24975832
Alignment:
Q  512 attttatcttttgttataaaaattgcttatacatcagcacttatatg 558  Q
    |||||||||||||||||| || | | |||||||||||||||||||||    
T  24975878 attttatcttttgttatagaagtagattatacatcagcacttatatg 24975832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 503 - 545
Target Start/End: Complemental strand, 28178952 - 28178910
Alignment:
Q  503 tatgacttcattttatcttttgttataaaaattgcttatacat 545  Q
    |||||||| |||||||||||||||||| |||| ||||||||||    
T  28178952 tatgactttattttatcttttgttatagaaatagcttatacat 28178910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 382 - 436
Target Start/End: Original strand, 29574584 - 29574638
Alignment:
Q  382 cacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataa 436  Q
    ||||||||| ||||||| | |||  |||||||||||||| |||||||||||||||    
T  29574584 cacttgtgagactgtttcggagaacttatggaaacagcttatgacatgtccataa 29574638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 505 - 555
Target Start/End: Complemental strand, 30134030 - 30133980
Alignment:
Q  505 tgacttcattttatcttttgttataaaaattgcttatacatcagcacttat 555  Q
    |||||| ||||||||||||||| ||||||| |||||||||| | |||||||    
T  30134030 tgactttattttatcttttgttgtaaaaatagcttatacataaacacttat 30133980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 512 - 554
Target Start/End: Complemental strand, 33894597 - 33894555
Alignment:
Q  512 attttatcttttgttataaaaattgcttatacatcagcactta 554  Q
    |||||||||||||||||| |||| |||||||||| ||||||||    
T  33894597 attttatcttttgttatagaaatagcttatacataagcactta 33894555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 401 - 497
Target Start/End: Original strand, 39551526 - 39551620
Alignment:
Q  401 aagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttccataaactgt-ctagaaaagcttatgaaaatagcttatagc 497  Q
    ||||| ||||||||||| || |||||||||||||  ||| |||| ||||||| ||||||||| || | ||||| ||| |||||||||||| |||||||    
T  39551526 aagaggttatggaaacaacttatgacatgtccat--aaggtgttgtcagcttatttccataagctttcctagagaag-ttatgaaaatagattatagc 39551620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 520 - 558
Target Start/End: Complemental strand, 45078259 - 45078221
Alignment:
Q  520 ttttgttataaaaattgcttatacatcagcacttatatg 558  Q
    ||||||||||||||| |||||||||| ||||||||||||    
T  45078259 ttttgttataaaaatagcttatacataagcacttatatg 45078221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 357 - 481
Target Start/End: Complemental strand, 1710865 - 1710744
Alignment:
Q  357 atttgaacttatatactgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagctttttt 456  Q
    |||||| ||||| |||| | |||| | ||||||| |||||||| || |||||| | |||||||| |  |||| ||||||||   |||||||||||| |||    
T  1710865 atttgagcttatctactaacataatcccttgtgacactgtttgaaa-agtttaagaaaacagcttacaacatctccataaac--tgttttcagcttattt 1710769  T
Q  457 ccataaactgtctagaaaagcttat 481  Q
    |||||| || ||||||| |||||||    
T  1710768 ccataacctctctagaatagcttat 1710744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 513 - 558
Target Start/End: Complemental strand, 7244675 - 7244630
Alignment:
Q  513 ttttatcttttgttataaaaattgcttatacatcagcacttatatg 558  Q
    |||||||||||| |||| |||| |||||||||| ||||||||||||    
T  7244675 ttttatcttttgatatagaaatagcttatacataagcacttatatg 7244630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 513 - 578
Target Start/End: Original strand, 22388001 - 22388066
Alignment:
Q  513 ttttatcttttgttataaaaattgcttatacatcagcacttatatgtaaagtgcttatcttataag 578  Q
    ||||||||||||||||| |||| |||||| ||| |||||||| |||  ||||| |||| |||||||    
T  22388001 ttttatcttttgttatagaaatagcttatccataagcacttaaatgataagtgtttatgttataag 22388066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 423 - 495
Target Start/End: Original strand, 24363601 - 24363671
Alignment:
Q  423 tgacatgtccataaaagttgttttcagcttttttccataaactgtctagaaaagcttatgaaaatagcttata 495  Q
    ||||||||||||||  |||||||||||||| ||||||||| || || || | |||||||||||| | ||||||    
T  24363601 tgacatgtccataa--gttgttttcagcttatttccataacctctccaggatagcttatgaaaacaacttata 24363671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 518 - 555
Target Start/End: Original strand, 25670687 - 25670724
Alignment:
Q  518 tcttttgttataaaaattgcttatacatcagcacttat 555  Q
    ||||||||||||||||| |||||||||| |||||||||    
T  25670687 tcttttgttataaaaatagcttatacataagcacttat 25670724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 436
Target Start/End: Original strand, 27517265 - 27517318
Alignment:
Q  383 acttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataa 436  Q
    |||||||| ||||||||  |||||||||||||||  ||||| ||||||||||||    
T  27517265 acttgtgagactgtttgagagagtttatggaaaccactcataacatgtccataa 27517318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 505 - 554
Target Start/End: Complemental strand, 28165072 - 28165023
Alignment:
Q  505 tgacttcattttatcttttgttataaaaattgcttatacatcagcactta 554  Q
    ||||||||||||||||||||||||| |||   ||||||||| ||||||||    
T  28165072 tgacttcattttatcttttgttatagaaagaacttatacataagcactta 28165023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 505 - 550
Target Start/End: Complemental strand, 31341175 - 31341130
Alignment:
Q  505 tgacttcattttatcttttgttataaaaattgcttatacatcagca 550  Q
    |||||| |||||||||||||||||| |||| |||||||||| ||||    
T  31341175 tgactttattttatcttttgttatacaaatagcttatacataagca 31341130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 365 - 434
Target Start/End: Complemental strand, 41040293 - 41040224
Alignment:
Q  365 ttatatactgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccat 434  Q
    |||| |||||||||||| | ||||||  || ||| |||||| |||||||||||||| ||||||| |||||    
T  41040293 ttatctactgatataagtatttgtgaggctctttagaagagcttatggaaacagcttatgacatatccat 41040224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 506 - 554
Target Start/End: Complemental strand, 5373205 - 5373157
Alignment:
Q  506 gacttcattttatcttttgttataaaaattgcttatacatcagcactta 554  Q
    ||||| |||||||||||||||||| |||| || ||||||| ||||||||    
T  5373205 gactttattttatcttttgttatagaaatagcatatacataagcactta 5373157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 402 - 465
Target Start/End: Original strand, 27496387 - 27496447
Alignment:
Q  402 agagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttccataaact 465  Q
    |||| ||| ||||||| ||||||||||||||||||  | |||||||||||| ||||||||||||    
T  27496387 agagcttaaggaaaca-ctcatgacatgtccataa--gctgttttcagcttatttccataaact 27496447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 402 - 465
Target Start/End: Original strand, 27503045 - 27503105
Alignment:
Q  402 agagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttccataaact 465  Q
    |||| ||| ||||||| ||||||||||||||||||  | |||||||||||| ||||||||||||    
T  27503045 agagcttaaggaaaca-ctcatgacatgtccataa--gctgttttcagcttatttccataaact 27503105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 505 - 557
Target Start/End: Original strand, 28340933 - 28340985
Alignment:
Q  505 tgacttcattttatcttttgttataaaaattgcttatacatcagcacttatat 557  Q
    ||||||||||| ||||||| |||||||||| || |||| || |||||||||||    
T  28340933 tgacttcatttcatcttttattataaaaatagcatatagataagcacttatat 28340985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 513 - 545
Target Start/End: Original strand, 28613631 - 28613663
Alignment:
Q  513 ttttatcttttgttataaaaattgcttatacat 545  Q
    |||||||||||||||||||||| ||||||||||    
T  28613631 ttttatcttttgttataaaaatagcttatacat 28613663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 383 - 497
Target Start/End: Original strand, 33645920 - 33646032
Alignment:
Q  383 acttgtgaaactgtttgga-agagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttccataaactgtctagaaaagcttat 481  Q
    |||||||| |||| ||||| |||| ||||||||||| || ||||||||||  || |||||||||| || || ||||||||| || || || | |||||||    
T  33645920 acttgtgagactggttggagagagcttatggaaacaacttatgacatgtc--tataagttgtttttaggttatttccataagctctccag-atagcttat 33646016  T
Q  482 gaaaatagcttatagc 497  Q
    ||||| || |||||||    
T  33646017 gaaaacagtttatagc 33646032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 377 - 425
Target Start/End: Complemental strand, 40009592 - 40009544
Alignment:
Q  377 ataagcacttgtgaaactgtttggaagagtttatggaaacagctcatga 425  Q
    |||||||||||||||||||||||| ||| |||||| ||| |||| ||||    
T  40009592 ataagcacttgtgaaactgtttggtagaatttatgaaaatagcttatga 40009544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 384 - 462
Target Start/End: Original strand, 45859488 - 45859563
Alignment:
Q  384 cttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttccataa 462  Q
    ||||||| |||||||||||||| ||| ||||||| |  ||||||||| |||   ||||||||||||||| |||| ||||    
T  45859488 cttgtgagactgtttggaagagcttacggaaacaacatatgacatgttcat---agttgttttcagcttatttctataa 45859563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 506 - 558
Target Start/End: Complemental strand, 46213783 - 46213731
Alignment:
Q  506 gacttcattttatcttttgttataaaaattgcttatacatcagcacttatatg 558  Q
    ||||| ||||||| |||||||||| |||| |||| ||||| ||||||||||||    
T  46213783 gactttattttatattttgttatagaaatagcttttacataagcacttatatg 46213731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 357 - 494
Target Start/End: Original strand, 10199342 - 10199477
Alignment:
Q  357 atttgaacttatatactgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagctttttt 456  Q
    |||||| ||||| |||| | |||||||||||||| ||| ||||| |||  | ||| ||| |||| ||||||||| |||||  |||||||||||||| |||    
T  10199342 atttgagcttatctactaacataagcacttgtgacactatttgggagaactcatgaaaatagcttatgacatgttcataa--gttgttttcagcttattt 10199439  T
Q  457 ccataaactgtctagaaaagcttatgaaaatagcttat 494  Q
     ||||| || |||| || |||||||||||| |||||||    
T  10199440 tcataagctctctaaaatagcttatgaaaaaagcttat 10199477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 357 - 462
Target Start/End: Original strand, 12564433 - 12564536
Alignment:
Q  357 atttgaacttatatactgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagctttttt 456  Q
    |||||| ||||||||||||||||||||||||||  ||||||||| |||| ||| | | | |||| |||||| ||| ||  |||||||||||||||| |||    
T  12564433 atttgagcttatatactgatataagcacttgtgtgactgtttgggagagcttacgtatatagcttatgacaagtcaat--aagttgttttcagcttattt 12564530  T
Q  457 ccataa 462  Q
    ||||||    
T  12564531 ccataa 12564536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 370 - 489
Target Start/End: Complemental strand, 6279522 - 6279405
Alignment:
Q  370 tactgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttccataaactgtct 469  Q
    |||||| |||||||||||||   |||||||  |||| |||||||||||| | |  ||||||||||||  |||||||||||| | ||||||||| || |||    
T  6279522 tactgacataagcacttgtgtggctgtttgagagagcttatggaaacagttaaccacatgtccataa--gttgttttcagcgtatttccataagctctct 6279425  T
Q  470 agaaaagcttatgaaaatag 489  Q
    || | |||||||||||||||    
T  6279424 aggatagcttatgaaaatag 6279405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 357 - 433
Target Start/End: Original strand, 23373247 - 23373323
Alignment:
Q  357 atttgaacttatatactgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtcca 433  Q
    |||||||||| | ||||||||||||||||||||| | ||||||| |||| |||| |||||| || ||||||||||||    
T  23373247 atttgaacttgtctactgatataagcacttgtgagattgtttgggagagcttatagaaacaacttatgacatgtcca 23373323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 364 - 497
Target Start/End: Complemental strand, 15581383 - 15581252
Alignment:
Q  364 cttatatactgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttccataaa 463  Q
    ||||| |||||| |||||||||||||| | |||||||||||| | ||||||||| || ||||||||||  || ||| |||||||||| | |||| ||||     
T  15581383 cttatctactgacataagcacttgtgagattgtttggaagagctaatggaaacaacttatgacatgtc--tataagctgttttcagcctatttctataag 15581286  T
Q  464 ctgtctagaaaagcttatgaaaatagcttatagc 497  Q
    |  ||||| | | ||||| |||| ||||||||||    
T  15581285 ccctctagcataccttataaaaaaagcttatagc 15581252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 505 - 558
Target Start/End: Complemental strand, 871026 - 870973
Alignment:
Q  505 tgacttcattttatcttttgttataaaaattgcttatacatcagcacttatatg 558  Q
    |||||| ||||||||||||||||||||||| | |||||||| ||||||||||||    
T  871026 tgacttaattttatcttttgttataaaaatagtttatacataagcacttatatg 870973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 377 - 448
Target Start/End: Original strand, 32515395 - 32515464
Alignment:
Q  377 ataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttca 448  Q
    |||||||||||||| ||||||||| |||| |||||||||||||  |||||||||| ||  ||||||||||||    
T  32515395 ataagcacttgtgagactgtttgggagagcttatggaaacagcgtatgacatgtcaat--aagttgttttca 32515464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 373 - 467
Target Start/End: Original strand, 3597231 - 3597323
Alignment:
Q  373 tgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttccataaactgt 467  Q
    |||||||| ||||||||| |||||||||||||||| ||  ||| | || |||||||| ||||  ||| | |||||||||| ||||||||||||||    
T  3597231 tgatataaccacttgtgagactgtttggaagagttgataaaaataacttatgacatggccat--aagctattttcagcttatttccataaactgt 3597323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 505 - 555
Target Start/End: Original strand, 6933050 - 6933100
Alignment:
Q  505 tgacttcattttatcttttgttataaaaattgcttatacatcagcacttat 555  Q
    |||||| ||||||| ||||||||||||||| |||||||||| |||||||||    
T  6933050 tgactttattttatgttttgttataaaaatggcttatacatgagcacttat 6933100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 392 - 465
Target Start/End: Complemental strand, 15579583 - 15579512
Alignment:
Q  392 actgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttccataaact 465  Q
    ||||||||| |||| || |||||||| || |||||||||||||  |||||||| ||||||| ||||||||||||    
T  15579583 actgtttgggagagcttgtggaaacaacttatgacatgtccat--aagttgttctcagcttatttccataaact 15579512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 402 - 495
Target Start/End: Complemental strand, 27140569 - 27140478
Alignment:
Q  402 agagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttccataaactgtctagaaaagcttatgaaaatagcttata 495  Q
    |||||||| |||||||||| |||||||||||||  |||||||||||||||| ||| ||||| || || |  | ||||||| |||| ||||||||    
T  27140569 agagtttaaggaaacagcttatgacatgtccat--aagttgttttcagcttatttgcataagctctccatgatagcttataaaaacagcttata 27140478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 357 - 462
Target Start/End: Original strand, 31517674 - 31517777
Alignment:
Q  357 atttgaacttatatactgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagctttttt 456  Q
    |||||| ||||| |||||  |||||||||||||| ||||||||| |||  ||||  ||||| |||||||||||| |||  ||| |||||||||||| |||    
T  31517674 atttgagcttatttactggcataagcacttgtgagactgtttgggagaacttatcaaaacaactcatgacatgttcat--aagctgttttcagcttattt 31517771  T
Q  457 ccataa 462  Q
     |||||    
T  31517772 tcataa 31517777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 357 - 462
Target Start/End: Original strand, 33723316 - 33723419
Alignment:
Q  357 atttgaacttatatactgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagctttttt 456  Q
    |||||||||||| ||||   |||| ||||||||| |||| |||| | |  |||||||||||||||||||||||| |||   || |||||||||||| |||    
T  33723316 atttgaacttatctactaccataaacacttgtgagactgcttgggaaaacttatggaaacagctcatgacatgttcat--gagatgttttcagcttattt 33723413  T
Q  457 ccataa 462  Q
    ||||||    
T  33723414 ccataa 33723419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 364 - 452
Target Start/End: Original strand, 38170631 - 38170717
Alignment:
Q  364 cttatatactgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagctt 452  Q
    |||||||||||  || | ||||||||| |||| |||| |||| ||||| |||||||| ||||||||| |||  ||||||||||||||||    
T  38170631 cttatatactggcatgaacacttgtgagactgcttgggagagcttatgaaaacagcttatgacatgttcat--aagttgttttcagctt 38170717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 357 - 417
Target Start/End: Complemental strand, 5157208 - 5157148
Alignment:
Q  357 atttgaacttatatactgatataagcacttgtgaaactgtttggaagagtttatggaaaca 417  Q
    |||||||||||| ||| || |||| ||||||||||||||||||| |||| |||| ||||||    
T  5157208 atttgaacttatctacggacataaacacttgtgaaactgtttgggagagcttatagaaaca 5157148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 486 - 558
Target Start/End: Complemental strand, 6659703 - 6659631
Alignment:
Q  486 atagcttatagcataagtatgacttcattttatcttttgttataaaaattgcttatacatcagcacttatatg 558  Q
    |||||||||| || ||  ||||| ||||||||||||||| |||| |||| | |||||||| ||||||||||||    
T  6659703 atagcttatatcaaaaccatgacgtcattttatcttttgctatagaaatagtttatacataagcacttatatg 6659631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 514 - 558
Target Start/End: Complemental strand, 13037836 - 13037792
Alignment:
Q  514 tttatcttttgttataaaaattgcttatacatcagcacttatatg 558  Q
    |||||||||||||||| |||| |||||||||| ||||||||||||    
T  13037836 tttatcttttgttatagaaatagcttatacataagcacttatatg 13037792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 437 - 497
Target Start/End: Original strand, 14629978 - 14630038
Alignment:
Q  437 aagttgttttcagcttttttccataaactgtctagaaaagcttatgaaaatagcttatagc 497  Q
    |||||||||||||||| |||||||||| | || |  | |||||||||||||||||||||||    
T  14629978 aagttgttttcagcttatttccataaagtctccaagatagcttatgaaaatagcttatagc 14630038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 382 - 430
Target Start/End: Original strand, 28467268 - 28467316
Alignment:
Q  382 cacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgt 430  Q
    ||||||||||||||||||| |||| ||||||||| |||||||| |||||    
T  28467268 cacttgtgaaactgtttgggagagcttatggaaatagctcatggcatgt 28467316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 377 - 437
Target Start/End: Complemental strand, 29723605 - 29723545
Alignment:
Q  377 ataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaa 437  Q
    |||||||||||||| || ||||| ||||  | |||||||||||| ||||||||||||||||    
T  29723605 ataagcacttgtgatacagtttgaaagaactaatggaaacagcttatgacatgtccataaa 29723545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 357 - 495
Target Start/End: Complemental strand, 6292628 - 6292493
Alignment:
Q  357 atttgaacttatatactgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagctttttt 456  Q
    |||||| ||||| |||||| |||||||||| ||| | ||||||| ||| ||| |  |||||||| ||||||||| |||||  | |||||||||||| |||    
T  6292628 atttgagcttatctactgacataagcacttttgagattgtttgggagaattttta-aaacagcttatgacatgttcataa--gctgttttcagcttattt 6292532  T
Q  457 ccataaactgtctagaaaagcttatgaaaatagcttata 495  Q
     ||||| || || | || || ||| ||||||||||||||    
T  6292531 tcataagctctccaaaatagtttacgaaaatagcttata 6292493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 505 - 564
Target Start/End: Original strand, 46499943 - 46500002
Alignment:
Q  505 tgacttcattttatcttttgttataaaaattgcttatacatcagcacttatatgtaaagt 564  Q
    |||||| |||||||||||| ||||| |||| ||||||| || ||||||||||||| ||||    
T  46499943 tgactttattttatcttttcttatagaaatagcttatagataagcacttatatgttaagt 46500002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 507 - 558
Target Start/End: Complemental strand, 49557120 - 49557069
Alignment:
Q  507 acttcattttatcttttgttataaaaattgcttatacatcagcacttatatg 558  Q
    |||| |||||||||||||||||| ||||  |||||||| |||||||||||||    
T  49557120 actttattttatcttttgttatagaaataacttatacagcagcacttatatg 49557069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 357 - 462
Target Start/End: Original strand, 44815237 - 44815340
Alignment:
Q  357 atttgaacttatatactgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagctttttt 456  Q
    |||||||||||| |||||| ||||||| |||||| ||| | |||||||  | ||||||  |||| |||| ||||  |||||  ||||||||||||| |||    
T  44815237 atttgaacttatctactgacataagcatttgtgagactttgtggaagaactcatggaactagcttatgatatgtgtataaa--ttgttttcagcttattt 44815334  T
Q  457 ccataa 462  Q
    ||||||    
T  44815335 ccataa 44815340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 505 - 555
Target Start/End: Original strand, 45999377 - 45999427
Alignment:
Q  505 tgacttcattttatcttttgttataaaaattgcttatacatcagcacttat 555  Q
    |||||| || ||||||||||||||| |||| |||||||||| |||||||||    
T  45999377 tgactttatcttatcttttgttatagaaatagcttatacatgagcacttat 45999427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 505 - 558
Target Start/End: Complemental strand, 289221 - 289168
Alignment:
Q  505 tgacttcattttatcttttgttataaaaattgcttatacatcagcacttatatg 558  Q
    |||||| ||||||||||||| || |||||| |||||||| | ||||||||||||    
T  289221 tgactttattttatcttttgctacaaaaatagcttatacttaagcacttatatg 289168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 505 - 570
Target Start/End: Complemental strand, 4200210 - 4200145
Alignment:
Q  505 tgacttcattttatcttttgttataaaaattgcttatacatcagcacttatatgtaaagtgcttat 570  Q
    |||||| |||||||||||||||||||||||  |||||| || | |||||| |||  ||||||||||    
T  4200210 tgactttattttatcttttgttataaaaataacttatatataaacacttagatgataagtgcttat 4200145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 377 - 461
Target Start/End: Original strand, 12477242 - 12477323
Alignment:
Q  377 ataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttccata 461  Q
    |||| ||||| ||| ||| |||||| ||||| ||| || ||||| |||||||||||||||  |||||||||||||| ||||||||    
T  12477242 ataaacacttctgagactatttgga-gagttaatgaaagcagcttatgacatgtccataa--gttgttttcagcttatttccata 12477323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 440 - 497
Target Start/End: Complemental strand, 15361768 - 15361711
Alignment:
Q  440 ttgttttcagcttttttccataaactgtctagaaaagcttatgaaaatagcttatagc 497  Q
    |||||||||||||  ||||||||||| || |||| | |||||||||| ||||||||||    
T  15361768 ttgttttcagcttaattccataaactctcaagaatatcttatgaaaacagcttatagc 15361711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 436
Target Start/End: Complemental strand, 27146015 - 27145978
Alignment:
Q  399 ggaagagtttatggaaacagctcatgacatgtccataa 436  Q
    ||||||| |||||||||||||| |||||||||||||||    
T  27146015 ggaagagcttatggaaacagcttatgacatgtccataa 27145978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 357 - 418
Target Start/End: Original strand, 44375293 - 44375354
Alignment:
Q  357 atttgaacttatatactgatataagcacttgtgaaactgtttggaagagtttatggaaacag 418  Q
    |||||||||||| |||||| || | ||||||  || |||||||||||||||||| |||||||    
T  44375293 atttgaacttatctactgacattaacacttgcaaacctgtttggaagagtttatagaaacag 44375354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 380 - 452
Target Start/End: Complemental strand, 45327693 - 45327623
Alignment:
Q  380 agcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagctt 452  Q
    ||||||||||| |||  ||||  ||| ||||||||||| || ||||||||||||||||  |||||||||||||    
T  45327693 agcacttgtgagactagttgggggagcttatggaaacaacttatgacatgtccataaa--ttgttttcagctt 45327623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 505 - 553
Target Start/End: Complemental strand, 1730873 - 1730825
Alignment:
Q  505 tgacttcattttatcttttgttataaaaattgcttatacatcagcactt 553  Q
    |||||| ||||||||||| |||| |||||| |||||||||| |||||||    
T  1730873 tgactttattttatctttggttaaaaaaatagcttatacataagcactt 1730825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 400 - 495
Target Start/End: Original strand, 11639393 - 11639486
Alignment:
Q  400 gaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttccataaactgtctagaaaagcttatgaaaatagcttata 495  Q
    |||||| ||||| |||||||| |||||||||||||  ||| |||||| ||||| ||| ||||| || ||||||| | |||||| ||| || |||||    
T  11639393 gaagagcttatgaaaacagcttatgacatgtccat--aagctgtttttagcttattttcataagctctctagaataacttatgcaaacagtttata 11639486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 377 - 460
Target Start/End: Complemental strand, 17420319 - 17420238
Alignment:
Q  377 ataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttccat 460  Q
    |||| ||||||| | ||||||| |||||| ||||| ||||| || || |||||||||||||  ||||||||| ||| |||||||    
T  17420319 ataaacacttgttagactgttttgaagagcttatgaaaacaacttattacatgtccataaa--ttgttttcaacttatttccat 17420238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 411 - 462
Target Start/End: Original strand, 28689440 - 28689489
Alignment:
Q  411 ggaaacagctcatgacatgtccataaaagttgttttcagcttttttccataa 462  Q
    |||||||||| |||||||||||||  |||||||||||||||| ||| |||||    
T  28689440 ggaaacagcttatgacatgtccat--aagttgttttcagcttattttcataa 28689489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 383 - 450
Target Start/End: Original strand, 29929581 - 29929646
Alignment:
Q  383 acttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagc 450  Q
    |||||||| ||||||| | |||| ||||| ||||| |||||||||||| |||  ||||||||||||||    
T  29929581 acttgtgatactgttttggagagcttatgaaaacaactcatgacatgtgcat--aagttgttttcagc 29929646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 501 - 569
Target Start/End: Original strand, 41638395 - 41638463
Alignment:
Q  501 agtatgacttcattttatcttttgttataaaaattgcttatacatcagcacttatatgtaaagtgctta 569  Q
    |||||||||| |||||||||| |||| || ||||   |||||||| ||||||||||||  |||||||||    
T  41638395 agtatgactttattttatcttgtgttctataaataaattatacataagcacttatatgataagtgctta 41638463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 505 - 545
Target Start/End: Complemental strand, 50319273 - 50319233
Alignment:
Q  505 tgacttcattttatcttttgttataaaaattgcttatacat 545  Q
    |||||| |||||||||||||||||| |||| ||||||||||    
T  50319273 tgactttattttatcttttgttatagaaatagcttatacat 50319233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 505 - 558
Target Start/End: Complemental strand, 47970299 - 47970246
Alignment:
Q  505 tgacttcattttatcttttgttataaaaattgcttatacatcagcacttatatg 558  Q
    ||||||||||||||||||||||||| |||| |||||||||| ||||||||||||    
T  47970299 tgacttcattttatcttttgttatagaaatagcttatacataagcacttatatg 47970246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 357 - 433
Target Start/End: Complemental strand, 25717729 - 25717653
Alignment:
Q  357 atttgaacttatatactgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtcca 433  Q
    |||||| ||||| ||| || |||||||||||||||| |||||||||||| ||||||||||| || ||||| ||||||    
T  25717729 atttgagcttatgtaccgacataagcacttgtgaaattgtttggaagagcttatggaaacaacttatgacttgtcca 25717653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 377 - 486
Target Start/End: Complemental strand, 19305042 - 19304935
Alignment:
Q  377 ataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttccataaactgtctagaaaag 476  Q
    ||||||| |||||| | ||| ||| ||| ||| ||||||||||| |||||||||||||  |||||||||||||||| ||||||| |||| || | || ||    
T  19305042 ataagcatttgtgagattgtgtgggagaatttgtggaaacagcttatgacatgtccat--aagttgttttcagcttgtttccattaactctccaaaatag 19304945  T
Q  477 cttatgaaaa 486  Q
    ||||| ||||    
T  19304944 cttataaaaa 19304935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 385 - 462
Target Start/End: Complemental strand, 23819197 - 23819122
Alignment:
Q  385 ttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttccataa 462  Q
    |||||| |||||||||||||||||| | |||||||| |||||||||||||  |||||||||||| ||| |||| ||||    
T  23819197 ttgtgagactgtttggaagagtttaagaaaacagcttatgacatgtccat--aagttgttttcatcttatttctataa 23819122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 505 - 579
Target Start/End: Original strand, 51555956 - 51556030
Alignment:
Q  505 tgacttcattttatcttttgttataaaaattgcttatacatcagcacttatatgtaaagtgcttatcttataagt 579  Q
    |||||| ||||||||||||||||||| ||| |||||||||| ||||||||||||  || || |||| ||||||||    
T  51555956 tgactttattttatcttttgttataataatagcttatacataagcacttatatgataaatggttatgttataagt 51556030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 406 - 497
Target Start/End: Complemental strand, 24929580 - 24929491
Alignment:
Q  406 tttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttccataaactgtctagaaaagcttatgaaaatagcttatagc 497  Q
    ||||||||||||||| ||| ||||| ||||||  ||||||||||||| ||||||||| || ||||| | || ||||||||| | ||||||||    
T  24929580 tttatggaaacagcttatggcatgttcataaa--ttgttttcagcttatttccataagctctctagtagagtttatgaaaacaacttatagc 24929491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 357 - 436
Target Start/End: Complemental strand, 2996709 - 2996630
Alignment:
Q  357 atttgaacttatatactgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataa 436  Q
    |||||||||||| || ||| |||||||||| ||| ||||||||  |||| ||||| ||||| || |||||||||||||||    
T  2996709 atttgaacttatttattgacataagcacttttgagactgtttgagagagcttatgaaaacaacttatgacatgtccataa 2996630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 357 - 436
Target Start/End: Complemental strand, 6428154 - 6428075
Alignment:
Q  357 atttgaacttatatactgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataa 436  Q
    |||||| |||||||| || ||||||||||||||| || |||||  |||| ||||| ||||| || |||||||||||||||    
T  6428154 atttgagcttatatattggtataagcacttgtgagacagtttgagagagattatgaaaacaacttatgacatgtccataa 6428075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 357 - 462
Target Start/End: Complemental strand, 47970432 - 47970329
Alignment:
Q  357 atttgaacttatatactgatataagcacttgtgaaactgtt-tggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttt 455  Q
    |||||| ||||| |||||| ||||||||||||||||||||| ||||| || ||||||||||  ||  |||||| ||||||||  ||||||||||||| ||    
T  47970432 atttgagcttatctactgacataagcacttgtgaaactgttatggaa-agcttatggaaactacttgtgacatttccataaa--ttgttttcagcttatt 47970336  T
Q  456 tccataa 462  Q
    | |||||    
T  47970335 tgcataa 47970329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 504 - 558
Target Start/End: Original strand, 8422925 - 8422979
Alignment:
Q  504 atgacttcattttatcttttgttataaaaattgcttatacatcagcacttatatg 558  Q
    ||||||| |||||||||||| |||||||||| |||||||||| ||||| ||||||    
T  8422925 atgactttattttatctttttttataaaaatagcttatacataagcacatatatg 8422979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 357 - 462
Target Start/End: Complemental strand, 21157904 - 21157801
Alignment:
Q  357 atttgaacttatatactgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagctttttt 456  Q
    |||||| || || |||||| |||||||||||| | |||||||||||||| |||  ||||||||| ||||||| |  | ||||| |||||| ||||| |||    
T  21157904 atttgagctcatctactgacataagcacttgtaagactgtttggaagagcttacagaaacagcttatgacattt--acaaaagctgtttttagcttattt 21157807  T
Q  457 ccataa 462  Q
    ||||||    
T  21157806 ccataa 21157801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 382 - 462
Target Start/End: Original strand, 3176063 - 3176141
Alignment:
Q  382 cacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttccataa 462  Q
    ||||||||||||||||| | |||| ||||| ||||| || ||| ||||||  || |||||||||||||||| |||||||||    
T  3176063 cacttgtgaaactgtttaggagagcttatgaaaacatcttatgtcatgtc--tataagttgttttcagcttatttccataa 3176141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 513 - 558
Target Start/End: Complemental strand, 4191712 - 4191667
Alignment:
Q  513 ttttatcttttgttataaaaattgcttatacatcagcacttatatg 558  Q
    ||||||||||||||||| |||| |||||||||| ||||||||||||    
T  4191712 ttttatcttttgttatagaaatagcttatacataagcacttatatg 4191667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 359 - 436
Target Start/End: Complemental strand, 52754733 - 52754656
Alignment:
Q  359 ttgaacttatatactgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataa 436  Q
    |||| |||| ||||| |||||| ||  |||||||||||||||||||| ||||| |||||| | ||||| |||||||||    
T  52754733 ttgagcttaaatactcatataaacatctgtgaaactgtttggaagagcttatgaaaacagtttatgacgtgtccataa 52754656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 437 - 497
Target Start/End: Original strand, 7694022 - 7694082
Alignment:
Q  437 aagttgttttcagcttttttccataaactgtctagaaaagcttatgaaaatagcttatagc 497  Q
    |||||||||||||||| |||||||||||| || || | | |||||||||| ||||||||||    
T  7694022 aagttgttttcagcttatttccataaactctccaggataacttatgaaaacagcttatagc 7694082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 365 - 471
Target Start/End: Original strand, 29467566 - 29467670
Alignment:
Q  365 ttatatactgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttccataaac 464  Q
    |||| ||||| |||||  |||||||| | || |||| | || |||| ||||| ||| |||||||||||||||  | |||||||||||| |||||||||||    
T  29467566 ttatctactggtataaatacttgtgagattgcttggtaaagcttatagaaacggcttatgacatgtccataa--gctgttttcagcttatttccataaac 29467663  T
Q  465 tgtctag 471  Q
    | |||||    
T  29467664 tctctag 29467670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 370 - 495
Target Start/End: Complemental strand, 9680794 - 9680671
Alignment:
Q  370 tactgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttccataaactgtct 469  Q
    |||||| | |||||||||| | ||||| ||||||||  |||  |||||||| |||| ||||||||||  |||||||||||| ||||| || || || ||     
T  9680794 tactgagacaagcacttgtaagactgtatggaagagcatataaaaacagcttatgatatgtccataa--gttgttttcagcgttttttcaaaagctttcc 9680697  T
Q  470 agaaaagcttatgaaaatagcttata 495  Q
    || | |||||||||||  ||||||||    
T  9680696 aggatagcttatgaaagcagcttata 9680671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 377 - 435
Target Start/End: Complemental strand, 10172178 - 10172120
Alignment:
Q  377 ataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccata 435  Q
    |||||||||||||||||||||||  | || ||||||||||||||  |||||||| ||||    
T  10172178 ataagcacttgtgaaactgtttgatatagcttatggaaacagcttgtgacatgttcata 10172120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 357 - 431
Target Start/End: Original strand, 25434346 - 25434420
Alignment:
Q  357 atttgaacttatatactgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtc 431  Q
    |||||| ||||||| || | |||||||||||||||||||||| | |||| ||| | |||||||| || |||||||    
T  25434346 atttgagcttatatgctaaaataagcacttgtgaaactgtttaggagagcttaggaaaacagcttataacatgtc 25434420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 377 - 462
Target Start/End: Original strand, 27123306 - 27123389
Alignment:
Q  377 ataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttccataa 462  Q
    ||||| |||||||| ||||||||  |||| ||||||||||| || ||||||||||  |  |||||||||||| ||| |||||||||    
T  27123306 ataagtacttgtgagactgtttgagagagcttatggaaacaacttatgacatgtc--tttaagttgttttcaacttatttccataa 27123389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 357 - 435
Target Start/End: Complemental strand, 29376039 - 29375961
Alignment:
Q  357 atttgaacttatatactgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccata 435  Q
    |||||||||||| || ||| ||||||||||||||  || |||   |||| |||||||||||||| |||||| |||||||    
T  29376039 atttgaacttatctattgacataagcacttgtgacgctatttcagagagcttatggaaacagcttatgacaggtccata 29375961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 392 - 497
Target Start/End: Complemental strand, 43932536 - 43932433
Alignment:
Q  392 actgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttccataaactgtctagaaaagcttatgaaaatagct 491  Q
    ||||||| | |||||||| |||| |||||||||||||||||||  |||||||||||| ||| ||| || ||  | |  |||| | ||||||||||||| |    
T  43932536 actgtttaggagagtttacggaagcagctcatgacatgtccat--aagttgttttcatcttattttcacaagttcttcagaataacttatgaaaatagtt 43932439  T
Q  492 tatagc 497  Q
    ||||||    
T  43932438 tatagc 43932433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 379 - 417
Target Start/End: Complemental strand, 50396798 - 50396760
Alignment:
Q  379 aagcacttgtgaaactgtttggaagagtttatggaaaca 417  Q
    ||||||||||||| |||||||| ||||||||||||||||    
T  50396798 aagcacttgtgaagctgtttgggagagtttatggaaaca 50396760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 500 - 554
Target Start/End: Original strand, 51044543 - 51044597
Alignment:
Q  500 aagtatgacttcattttatcttttgttataaaaattgcttatacatcagcactta 554  Q
    |||| |||||| |||||||||||||||||| |||| |||||||||| | ||||||    
T  51044543 aagtttgactttattttatcttttgttatagaaatagcttatacataaacactta 51044597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 505 - 558
Target Start/End: Original strand, 969434 - 969487
Alignment:
Q  505 tgacttcattttatcttttgttataaaaattgcttatacatcagcacttatatg 558  Q
    |||||| |||||| ||||| ||||| |||||||||||| || ||||||||||||    
T  969434 tgactttattttaccttttattatagaaattgcttatagataagcacttatatg 969487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 512 - 557
Target Start/End: Complemental strand, 4471145 - 4471100
Alignment:
Q  512 attttatcttttgttataaaaattgcttatacatcagcacttatat 557  Q
    ||||||||||||||||||||||| | |||| ||| |||||||||||    
T  4471145 attttatcttttgttataaaaatagtttatgcataagcacttatat 4471100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 436
Target Start/End: Original strand, 21043195 - 21043248
Alignment:
Q  383 acttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataa 436  Q
    |||||||| ||||||||| |||| |||||||||||||| |||||| || |||||    
T  21043195 acttgtgagactgtttgggagaggttatggaaacagcttatgacacgttcataa 21043248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 512 - 557
Target Start/End: Complemental strand, 28623263 - 28623218
Alignment:
Q  512 attttatcttttgttataaaaattgcttatacatcagcacttatat 557  Q
    |||||||||||||||||| ||||  ||||||||| |||||||||||    
T  28623263 attttatcttttgttatataaataacttatacataagcacttatat 28623218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 508 - 553
Target Start/End: Original strand, 37636297 - 37636342
Alignment:
Q  508 cttcattttatcttttgttataaaaattgcttatacatcagcactt 553  Q
    ||||||||||||||| ||||||||||| | |||||||| |||||||    
T  37636297 cttcattttatctttcgttataaaaatggtttatacataagcactt 37636342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 379 - 436
Target Start/End: Original strand, 41097212 - 41097269
Alignment:
Q  379 aagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataa 436  Q
    |||||||||||| |||||| || |||| |||| |||||| || |||||||||||||||    
T  41097212 aagcacttgtgagactgttcgggagagcttatagaaacaactaatgacatgtccataa 41097269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 506 - 554
Target Start/End: Original strand, 4798649 - 4798697
Alignment:
Q  506 gacttcattttatcttttgttataaaaattgcttatacatcagcactta 554  Q
    ||||| ||||||||||||| |||| |||| |||||||||| ||||||||    
T  4798649 gactttattttatcttttgatatagaaatagcttatacataagcactta 4798697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 385 - 437
Target Start/End: Original strand, 6987703 - 6987755
Alignment:
Q  385 ttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaa 437  Q
    |||||| ||||||||| |||| ||||||| ||| || ||||||||||||||||    
T  6987703 ttgtgagactgtttgggagagcttatggatacaacttatgacatgtccataaa 6987755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 377 - 417
Target Start/End: Complemental strand, 9316641 - 9316601
Alignment:
Q  377 ataagcacttgtgaaactgtttggaagagtttatggaaaca 417  Q
    |||| ||||||||||||||||||| |||| |||||||||||    
T  9316641 ataaacacttgtgaaactgtttgggagagcttatggaaaca 9316601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 386 - 453
Target Start/End: Complemental strand, 25583699 - 25583634
Alignment:
Q  386 tgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttt 453  Q
    ||||| ||||||||| || | ||||| ||||| || |||||||||||  |||||||||||||||||||    
T  25583699 tgtgagactgtttgggagcgcttatgcaaacaacttatgacatgtcc--aaaagttgttttcagcttt 25583634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 358 - 426
Target Start/End: Complemental strand, 28232680 - 28232612
Alignment:
Q  358 tttgaacttatatactgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgac 426  Q
    ||||||||||| || ||| || |||||||| || |||||||||||||| || |||||||| || |||||    
T  28232680 tttgaacttatctattgacatgagcacttgcgagactgtttggaagagcttgtggaaacaacttatgac 28232612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 512 - 556
Target Start/End: Original strand, 32066505 - 32066549
Alignment:
Q  512 attttatcttttgttataaaaattgcttatacatcagcacttata 556  Q
    ||||||||||||||||||||| | | |||||||| ||||||||||    
T  32066505 attttatcttttgttataaaagtagtttatacataagcacttata 32066549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 506 - 570
Target Start/End: Complemental strand, 44319929 - 44319866
Alignment:
Q  506 gacttcattttatcttttgttataaaaattgcttatacatcagcacttatatgtaaagtgcttat 570  Q
    ||||| |||||||||||| ||||| |||| | |||||||| ||||||||||||  ||||||||||    
T  44319929 gactttattttatctttt-ttatagaaatagtttatacatgagcacttatatgataagtgcttat 44319866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 365 - 464
Target Start/End: Original strand, 10559 - 10656
Alignment:
Q  365 ttatatactgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttccataaac 464  Q
    |||| |||||| ||||| |||||||| ||||||||  | || ||||| ||||| || |||||||||||||  |||||||||||||||| |||||||||||    
T  10559 ttatgtactgacataagtacttgtgagactgtttgacaaagcttatgtaaacaactaatgacatgtccat--aagttgttttcagcttatttccataaac 10656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0590 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0590
Description:

Target: scaffold0590; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 505 - 558
Target Start/End: Original strand, 1163 - 1216
Alignment:
Q  505 tgacttcattttatcttttgttataaaaattgcttatacatcagcacttatatg 558  Q
    |||||| |||||||||||||||||| |||| |||||||||| ||||||||||||    
T  1163 tgactttattttatcttttgttatagaaatagcttatacataagcacttatatg 1216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0275 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 505 - 558
Target Start/End: Complemental strand, 2812 - 2759
Alignment:
Q  505 tgacttcattttatcttttgttataaaaattgcttatacatcagcacttatatg 558  Q
    |||||| |||||||||||||||||| |||| |||||||||| ||||||||||||    
T  2812 tgactttattttatcttttgttatagaaatagcttatacataagcacttatatg 2759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 357 - 495
Target Start/End: Original strand, 159907 - 160043
Alignment:
Q  357 atttgaacttatatactgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagctttttt 456  Q
    |||||| ||||| |||| |||||| ||||||||||||| ||| | |||  | |||||||||| | ||||||||||  || |||  ||||||||||| |||    
T  159907 atttgagcttatctactaatataaacacttgtgaaactattttggagaactaatggaaacagtttatgacatgtc--tataagcagttttcagcttattt 160004  T
Q  457 ccataaactgtctagaaaagcttatgaaaatagcttata 495  Q
    ||| || || | ||| | |||||||||||| | ||||||    
T  160005 ccacaagctctttaggatagcttatgaaaacatcttata 160043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 512 - 558
Target Start/End: Complemental strand, 42591 - 42545
Alignment:
Q  512 attttatcttttgttataaaaattgcttatacatcagcacttatatg 558  Q
    |||||||||||||||||| ||||  ||||||||| ||||||||||||    
T  42591 attttatcttttgttatagaaatgacttatacataagcacttatatg 42545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 512 - 558
Target Start/End: Original strand, 63381 - 63427
Alignment:
Q  512 attttatcttttgttataaaaattgcttatacatcagcacttatatg 558  Q
    ||||||||||||||||||||||| ||||||| |  ||||||||||||    
T  63381 attttatcttttgttataaaaatagcttataaacaagcacttatatg 63427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 370 - 459
Target Start/End: Complemental strand, 27699 - 27612
Alignment:
Q  370 tactgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttcca 459  Q
    |||||| ||| | |||| ||| ||||||||| |||| ||||||||| |||| |||||||| | ||||  |||||||||||||| ||||||    
T  27699 tactgacatatgtacttctgagactgtttgggagagcttatggaaatagcttatgacatggctataa--gttgttttcagcttatttcca 27612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0654 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0654
Description:

Target: scaffold0654; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 505 - 570
Target Start/End: Original strand, 6726 - 6791
Alignment:
Q  505 tgacttcattttatcttttgttataaaaattgcttatacatcagcacttatatgtaaagtgcttat 570  Q
    |||||| | ||||| |||||||||| |||| | |||||||| ||||||||||||  ||||||||||    
T  6726 tgacttaagtttattttttgttatagaaatagtttatacataagcacttatatgataagtgcttat 6791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 505 - 570
Target Start/End: Original strand, 116645 - 116710
Alignment:
Q  505 tgacttcattttatcttttgttataaaaattgcttatacatcagcacttatatgtaaagtgcttat 570  Q
    |||||| | ||||| |||||||||| |||| | |||||||| ||||||||||||  ||||||||||    
T  116645 tgacttaagtttattttttgttatagaaatagtttatacataagcacttatatgataagtgcttat 116710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 29; Significance: 0.0000009; HSPs: 2)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 357 - 496
Target Start/End: Original strand, 4157 - 4294
Alignment:
Q  357 atttgaacttatatactgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccataaaagttgttttcagctttttt 456  Q
    |||||| ||| | |||||| ||||||||||||||   ||||||  |||||||||||||||| || |||   |||| ||  |||||||||| | ||| |||    
T  4157 atttgagcttgtctactgacataagcacttgtgagcttgtttgtgagagtttatggaaacaacttatgcattgtcaat--aagttgttttaatcttgttt 4254  T
Q  457 ccataaactgtctagaaaagcttatgaaaatagcttatag 496  Q
    || ||| || ||||| | ||||||| |||| |||||||||    
T  4255 ccgtaagctttctagcatagcttattaaaacagcttatag 4294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 515 - 555
Target Start/End: Original strand, 35895 - 35935
Alignment:
Q  515 ttatcttttgttataaaaattgcttatacatcagcacttat 555  Q
    |||||||||||||||||||  |||||||||| |||||||||    
T  35895 ttatcttttgttataaaaacagcttatacataagcacttat 35935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0091 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0091
Description:

Target: scaffold0091; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 506 - 558
Target Start/End: Complemental strand, 5999 - 5947
Alignment:
Q  506 gacttcattttatcttttgttataaaaattgcttatacatcagcacttatatg 558  Q
    ||||| |||||||||||||||||  |||||| |||||||| | ||||||||||    
T  5999 gacttgattttatcttttgttattgaaattgtttatacataaacacttatatg 5947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 392 - 436
Target Start/End: Original strand, 42691 - 42735
Alignment:
Q  392 actgtttggaagagtttatggaaacagctcatgacatgtccataa 436  Q
    |||||||||||||||||||||||| |||| |||| ||||| ||||    
T  42691 actgtttggaagagtttatggaaatagcttatgatatgtctataa 42735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 407 - 486
Target Start/End: Complemental strand, 306412 - 306335
Alignment:
Q  407 ttatggaaacagctcatgacatgtccataaaagttgttttcagcttttttccataaactgtctagaaaagcttatgaaaa 486  Q
    |||||||||||||| |||||||| ||||  ||| ||||||||||||  || ||||| || ||||| | ||||||||||||    
T  306412 ttatggaaacagcttatgacatgcccat--aagctgttttcagcttacttacataagctctctaggatagcttatgaaaa 306335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University