View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF13144_high_2 (Length: 618)
Name: NF13144_high_2
Description: NF13144
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13144_high_2 |
 |  |
|
| [»] scaffold0014 (1 HSPs) |
 |  |  |
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Alignment Details
Target: chr6 (Bit Score: 522; Significance: 0; HSPs: 12)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 522; E-Value: 0
Query Start/End: Original strand, 13 - 600
Target Start/End: Original strand, 7806359 - 7806946
Alignment:
| Q |
13 |
aaaatagataagttcagcatgcaaatcttctaggataggacaagcattgagaaaatttatgtaatcatcccgattttcaaaagaaactgatgtcagattt |
112 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7806359 |
aaaatagataagttcagcatgcaaatcttctaggataggacaagcattgagaaaatttatgtaatcatcccgattttcaaaagaaactgatgtcagattt |
7806458 |
T |
 |
| Q |
113 |
agggttttgagtgatggaagatgaacacttgaagtatcctttccaacatataaactttgaagtttgagaacaacaagggtttgcgagacgaaaataacat |
212 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
7806459 |
agggttttgagtgatggaagatgaacacttgaagtatcctttccaacatataaactttgaagtttgagaacaacaagagtttgcgagacgaaaataacat |
7806558 |
T |
 |
| Q |
213 |
gctttaaggtgtggaaaggcaaagtgagatgaatttcctctatatgaggnnnnnnngcctcttggagccaatttgtcacgttaaatctactattttctgg |
312 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7806559 |
gctttaaggtgtggaaaggcaaagtgagatgaatttcctctatatgaggtttttttgcctcttggagccaatttgtcacgttaaatctactattttctgg |
7806658 |
T |
 |
| Q |
313 |
gtggtatctaaagtcatacttgagggaaannnnnnngatgggttggttggttgaaagaggagagatgatgacattattgacaaaactccggaagctctca |
412 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
7806659 |
gtggtatctaaagtcatacttgagggaaatttttttgatgggtttgttggttgaaagaggagagaggatgacattattgacaaaactccggaagctctca |
7806758 |
T |
 |
| Q |
413 |
acagcagggagtgaatagcagagtgcggtccaccgcttggaaagaatggacgtagtaaaagccagtttggtttggagaaaagagagaatgtaaagcagta |
512 |
Q |
| |
|
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7806759 |
acaacagggagtgaatagcagagtgcggtccaccgcttggaaagaatggacgtagtaaaagccagtttggtttggagaaaagagagaatgtaaagcagta |
7806858 |
T |
 |
| Q |
513 |
actcatctggtaaatcactgattctatcgaccaaatcgttttcacaattgtagagtgcctcctgtgagtaacaattaacctgaaccgt |
600 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
7806859 |
actcatctggtaaatcacttattctatcgaccaaatcgttttcacaattgtagagtgcctcctgggagtaacaattaacctgaaccgt |
7806946 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 25 - 170
Target Start/End: Complemental strand, 10415987 - 10415842
Alignment:
| Q |
25 |
ttcagcatgcaaatcttctaggataggacaagcattgagaaaatttatgtaatcatcccgattttcaaaagaaactgatgtcagatttagggttttgagt |
124 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||| ||| |||||||||||||| |
|
|
| T |
10415987 |
ttcagcatgcaaatcttctaggataggacaagcatgaagaaaatttatgtaatcattccgattttcaaaagaaactgatatcaagcttagggttttgagt |
10415888 |
T |
 |
| Q |
125 |
gatggaagatgaacacttgaagtatcctttccaacatataaacttt |
170 |
Q |
| |
|
|| |||||||||||| ||||||||||||||||||||||| ||||| |
|
|
| T |
10415887 |
gacagaagatgaacacatgaagtatcctttccaacatatacacttt |
10415842 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 28 - 208
Target Start/End: Original strand, 3255441 - 3255621
Alignment:
| Q |
28 |
agcatgcaaatcttctaggataggacaagcattgagaaaatttatgtaatcatcccgattttcaaaagaaactgatgtcagatttagggttttgagtgat |
127 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||||||||| ||||||| || |||||||||| |||| || || | |||||||||| |||||| |
|
|
| T |
3255441 |
agcatgcaaatcttctaggataggacaagcatagagaaaatttatataatcattccaattttcaaaataaacatattccaaagttagggtttttagtgat |
3255540 |
T |
 |
| Q |
128 |
ggaagatgaacacttgaagtatcctttccaacatataaactttgaagtttgagaacaacaagggtttgcgagacgaaaata |
208 |
Q |
| |
|
||||||| ||||| ||||| ||| |||||||| ||| |||| |||||||||||||||||||||||| ||| ||||||| |
|
|
| T |
3255541 |
ggaagatcaacacaagaagtgtccgctccaacatttaacctttcaagtttgagaacaacaagggtttggaagatgaaaata |
3255621 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 423 - 553
Target Start/End: Complemental strand, 10415778 - 10415648
Alignment:
| Q |
423 |
gtgaatagcagagtgcggtccaccgcttggaaagaatggacgtagtaaaagccagtttggtttggagaaaagagagaatgtaaagcagtaactcatctgg |
522 |
Q |
| |
|
|||||||||| |||| |||||||||||| |||||||||| | ||||||| | |||||||| | || |||| |||||||||||||||| ||||||||||| |
|
|
| T |
10415778 |
gtgaatagcaaagtggggtccaccgcttcgaaagaatggccatagtaaatgtcagtttggctgggggaaacgagagaatgtaaagcaataactcatctga |
10415679 |
T |
 |
| Q |
523 |
taaatcactgattctatcgaccaaatcgttt |
553 |
Q |
| |
|
|||||| |||||||| || ||||||| |||| |
|
|
| T |
10415678 |
taaatcgctgattctgtcaaccaaattgttt |
10415648 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 415 - 545
Target Start/End: Complemental strand, 7814113 - 7813983
Alignment:
| Q |
415 |
agcagggagtgaatagcagagtgcggtccaccgcttggaaagaatggacgtagtaaaagccagtttggtttggagaaaagagagaatgtaaagcagtaac |
514 |
Q |
| |
|
|||||||||||||||||||||| ||||||| ||||||||||| | || |||| ||||| ||||| ||| |||||||||||||||||| | || |||| |
|
|
| T |
7814113 |
agcagggagtgaatagcagagtccggtccatcgcttggaaagtacggttgtagagaaagcgagtttagttgggagaaaagagagaatgtgagacaataac |
7814014 |
T |
 |
| Q |
515 |
tcatctggtaaatcactgattctatcgacca |
545 |
Q |
| |
|
||||| |||||||| ||||||||||| |||| |
|
|
| T |
7814013 |
tcatccggtaaatcgctgattctatccacca |
7813983 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 419 - 540
Target Start/End: Complemental strand, 15398309 - 15398188
Alignment:
| Q |
419 |
gggagtgaatagcagagtgcggtccaccgcttggaaagaatggacgtagtaaaagccagtttggtttggagaaaagagagaatgtaaagcagtaactcat |
518 |
Q |
| |
|
|||||||||||| |||||| |||||||||||| ||||||| || ||||||||||| | ||| ||| ||||||||||||| |||| | || |||||||| |
|
|
| T |
15398309 |
gggagtgaatagaagagtggggtccaccgcttagaaagaagggttgtagtaaaagcaaattttgttgggagaaaagagagtatgtgacacaataactcat |
15398210 |
T |
 |
| Q |
519 |
ctggtaaatcactgattctatc |
540 |
Q |
| |
|
||||||| | ||||||||||| |
|
|
| T |
15398209 |
ctggtaatccgctgattctatc |
15398188 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 419 - 540
Target Start/End: Complemental strand, 15410096 - 15409975
Alignment:
| Q |
419 |
gggagtgaatagcagagtgcggtccaccgcttggaaagaatggacgtagtaaaagccagtttggtttggagaaaagagagaatgtaaagcagtaactcat |
518 |
Q |
| |
|
|||||||||||| |||||| |||||||||||| ||||||| || ||||||||||| | ||| ||| ||||||||||||| |||| | || |||||||| |
|
|
| T |
15410096 |
gggagtgaatagaagagtggggtccaccgcttagaaagaagggttgtagtaaaagcaaattttgttgggagaaaagagagtatgtgacacaataactcat |
15409997 |
T |
 |
| Q |
519 |
ctggtaaatcactgattctatc |
540 |
Q |
| |
|
||||||| | ||||||||||| |
|
|
| T |
15409996 |
ctggtaatccgctgattctatc |
15409975 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 417 - 537
Target Start/End: Complemental strand, 7871336 - 7871216
Alignment:
| Q |
417 |
cagggagtgaatagcagagtgcggtccaccgcttggaaagaatggacgtagtaaaagccagtttggtttggagaaaagagagaatgtaaagcagtaactc |
516 |
Q |
| |
|
|||||||||||||||| |||| | ||||||| |||||||||| || ||||| ||||| ||||||||| |||| ||||||||||||||| || ||||| |
|
|
| T |
7871336 |
cagggagtgaatagcatagtgggatccaccgtttggaaagaagggttgtagtgaaagcgagtttggttgggaggaaagagagaatgtaagacaacaactc |
7871237 |
T |
 |
| Q |
517 |
atctggtaaatcactgattct |
537 |
Q |
| |
|
||| |||||| ||||||||| |
|
|
| T |
7871236 |
atcaggtaaactactgattct |
7871216 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 27 - 200
Target Start/End: Complemental strand, 7814553 - 7814380
Alignment:
| Q |
27 |
cagcatgcaaatcttctaggataggacaagcattgagaaaatttatgtaatcatcccgattttcaaaagaaactgatgtcagatttagggttttgagtga |
126 |
Q |
| |
|
|||||||||||||||||||| | ||||||||| |||||| ||||||||||| | ||||||||||| |||| | | | || ||| ||||||| || |
|
|
| T |
7814553 |
cagcatgcaaatcttctaggttgggacaagcagaaagaaaacctatgtaatcattctgattttcaaaataaacataacttaaatgcaggattttgagcga |
7814454 |
T |
 |
| Q |
127 |
tggaagatgaacacttgaagtatcctttccaacatataaactttgaagtttgagaacaacaagggtttgcgaga |
200 |
Q |
| |
|
||||||| ||||| |||||||| ||||||| | |||| |||||||||||||||||||||||| |||| |
|
|
| T |
7814453 |
gggaagatcaacacaagaagtatcatttccaatgtgtaaatccataagtttgagaacaacaagggtttgagaga |
7814380 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 476 - 547
Target Start/End: Original strand, 3255928 - 3255999
Alignment:
| Q |
476 |
agtttggtttggagaaaagagagaatgtaaagcagtaactcatctggtaaatcactgattctatcgaccaaa |
547 |
Q |
| |
|
||||| ||| |||||||| | ||||||| ||| ||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
3255928 |
agttttgttgggagaaaacaaagaatgtgttgcaataactcatccggtaaatcactgattctatcgaccaaa |
3255999 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 117 - 210
Target Start/End: Complemental strand, 7871692 - 7871599
Alignment:
| Q |
117 |
ttttgagtgatggaagatgaacacttgaagtatcctttccaacatataaactttgaagtttgagaacaacaagggtttgcgagacgaaaataac |
210 |
Q |
| |
|
||||||| ||||||||||||||| ||||||||| || || || || || | |||||||||||||||||||||||| |||| ||||||||| |
|
|
| T |
7871692 |
ttttgagcaatggaagatgaacacatgaagtatcaattgaaaaatctatcctcttaagtttgagaacaacaagggtttgagagatgaaaataac |
7871599 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 28 - 150
Target Start/End: Complemental strand, 7860476 - 7860354
Alignment:
| Q |
28 |
agcatgcaaatcttctaggataggacaagcattgagaaaatttatgtaatcatcccgattttcaaaagaaactgatgtcagatttagggttttgagtgat |
127 |
Q |
| |
|
|||||| |||||||| || |||||||||||| |||||||| |||||||||| ||||||| |||| ||| ||| ||| || | |||||||| ||| |
|
|
| T |
7860476 |
agcatgtaaatcttccagaataggacaagcagaaagaaaattgatgtaatcattccgatttgtaaaatgaacggatttcaaatgcaatgttttgagcgat |
7860377 |
T |
 |
| Q |
128 |
ggaagatgaacacttgaagtatc |
150 |
Q |
| |
|
||||||| ||||| |||||||| |
|
|
| T |
7860376 |
ggaagatcaacacacgaagtatc |
7860354 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 120; Significance: 4e-61; HSPs: 3)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 24 - 259
Target Start/End: Original strand, 19317226 - 19317461
Alignment:
| Q |
24 |
gttcagcatgcaaatcttctaggataggacaagcattgagaaaatttatgtaatcatcccgattttcaaaagaaactgatgtcagatttagggttttgag |
123 |
Q |
| |
|
|||| |||| ||||||||||| |||||||||||||| |||||||||| ||||| || || ||||| |||| ||||||||||||||||||||||||| || |
|
|
| T |
19317226 |
gttctgcatacaaatcttctaagataggacaagcataaagaaaatttacgtaattattccaattttgaaaataaactgatgtcagatttagggttttaag |
19317325 |
T |
 |
| Q |
124 |
tgatggaagatgaacacttgaagtatcctttccaacatataaactttgaagtttgagaacaacaagggtttgcgagacgaaaataacatgctttaaggtg |
223 |
Q |
| |
|
||||||||||||||||| |||||| ||||||||||||||||||||| |||||| ||||||||||||||||| ||||| |||| | | || | ||||| |
|
|
| T |
19317326 |
tgatggaagatgaacacacgaagtaccctttccaacatataaactttcaagttttagaacaacaagggtttgagagacaaaaagatcgggcatcaaggta |
19317425 |
T |
 |
| Q |
224 |
tggaaaggcaaagtgagatgaatttcctctatatga |
259 |
Q |
| |
|
||| |||||||| ||||||||||||| ||||||||| |
|
|
| T |
19317426 |
tgggaaggcaaactgagatgaatttcttctatatga |
19317461 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 419 - 540
Target Start/End: Original strand, 19317660 - 19317781
Alignment:
| Q |
419 |
gggagtgaatagcagagtgcggtccaccgcttggaaagaatggacgtagtaaaagccagtttggtttggagaaaagagagaatgtaaagcagtaactcat |
518 |
Q |
| |
|
|||||||||||||||||| |||||| |||||||||||||||| ||||||||||| ||||| ||| ||||||||||||||||||||| || |||||||| |
|
|
| T |
19317660 |
gggagtgaatagcagagttgggtccaacgcttggaaagaatggctgtagtaaaagctagttttgttgggagaaaagagagaatgtaaatcaataactcat |
19317759 |
T |
 |
| Q |
519 |
ctggtaaatcactgattctatc |
540 |
Q |
| |
|
|||||||||| || |||||||| |
|
|
| T |
19317760 |
ctggtaaatcgcttattctatc |
19317781 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 350 - 398
Target Start/End: Original strand, 19317552 - 19317600
Alignment:
| Q |
350 |
atgggttggttggttgaaagaggagagatgatgacattattgacaaaac |
398 |
Q |
| |
|
||||||| ||||||||||| |||||||| |||| |||||||||||||| |
|
|
| T |
19317552 |
atgggtttgttggttgaaacaggagagagcatgatattattgacaaaac |
19317600 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 75; Significance: 3e-34; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 35 - 225
Target Start/End: Complemental strand, 14018187 - 14017997
Alignment:
| Q |
35 |
aaatcttctaggataggacaagcattgagaaaatttatgtaatcatcccgattttcaaaagaaactgatgtcagatttagggttttgagtgatggaagat |
134 |
Q |
| |
|
||||||||||||||||||||| ||| ||||||||||| ||||||| || ||||||||||||||| || || ||| |||||||||||||| ||||||| |
|
|
| T |
14018187 |
aaatcttctaggataggacaaccataaagaaaatttatataatcattccaattttcaaaagaaacatattccaaattcagggttttgagtgacggaagat |
14018088 |
T |
 |
| Q |
135 |
gaacacttgaagtatcctttccaacatataaactttgaagtttgagaacaacaagggtttgcgagacgaaaataacatgctttaaggtgtg |
225 |
Q |
| |
|
||||| |||||||||||| ||| || ||| | |||||||||||||||||||| |||||| || | ||||| ||| |||| |||||||| |
|
|
| T |
14018087 |
caacacacgaagtatccttttcaatatctaaccgttgaagtttgagaacaacaaaggtttgggatatgaaaacaacgggcttcaaggtgtg |
14017997 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 58; Significance: 4e-24; HSPs: 2)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 28 - 209
Target Start/End: Original strand, 37997164 - 37997345
Alignment:
| Q |
28 |
agcatgcaaatcttctaggataggacaagcattgagaaaatttatgtaatcatcccgattttcaaaagaaactgatgtcagatttagggttttgagtgat |
127 |
Q |
| |
|
|||||| |||||||| |||||||||||||| |||||||| |||||||| | | |||||| |||| | ||| || || || |||||||| || ||| |
|
|
| T |
37997164 |
agcatgaaaatcttcaaggataggacaagcggaaagaaaattaatgtaatccttctgatttttaaaatacactaattgcaaataaagggttttcagcgat |
37997263 |
T |
 |
| Q |
128 |
ggaagatgaacacttgaagtatcctttccaacatataaactttgaagtttgagaacaacaagggtttgcgagacgaaaataa |
209 |
Q |
| |
|
||||||| ||||| ||||||| |||||||||| ||| |||| |||||||||||||||||||||||| |||| |||||||| |
|
|
| T |
37997264 |
ggaagatcaacacacaaagtatcatttccaacatttaaccttttaagtttgagaacaacaagggtttgggagatgaaaataa |
37997345 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 421 - 570
Target Start/End: Original strand, 37997596 - 37997745
Alignment:
| Q |
421 |
gagtgaatagcagagtgcggtccaccgcttggaaagaatggacgtagtaaaagccagtttggtttggagaaaagagagaatgtaaagcagtaactcatct |
520 |
Q |
| |
|
||||||| |||||||| |||||||||||| ||||||| | ||||||||||| ||||| || | ||||||||||| |||||| || |||||||||| |
|
|
| T |
37997596 |
gagtgaacagcagagtagggtccaccgctttgaaagaacagttgtagtaaaagcgagtttcattggtagaaaagagagtatgtaacacaataactcatct |
37997695 |
T |
 |
| Q |
521 |
ggtaaatcactgattctatcgaccaaatcgttttcacaattgtagagtgc |
570 |
Q |
| |
|
|||||||| |||||||||||| |||||| ||| ||| |||||||||||| |
|
|
| T |
37997696 |
ggtaaatcgctgattctatcgtccaaattgttgccaccattgtagagtgc |
37997745 |
T |
 |
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Target: scaffold0014 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0014
Description:
Target: scaffold0014; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 70 - 185
Target Start/End: Original strand, 166485 - 166598
Alignment:
| Q |
70 |
tatgtaatcatcccgattttcaaaagaaactgatgtcagatttagggttttgagtgatggaagatgaacacttgaagtatcctttccaacatataaactt |
169 |
Q |
| |
|
||||||||||| | || ||| |||| |||||||||| | || || |||| |||||||||||||| ||||| ||||||| || |||||||||||| || |
|
|
| T |
166485 |
tatgtaatcattctgactttaaaaataaactgatgttaaatgtaaggtt--gagtgatggaagattaacacacaaagtatcattaccaacatataaattt |
166582 |
T |
 |
| Q |
170 |
tgaagtttgagaacaa |
185 |
Q |
| |
|
| |||||||||||||| |
|
|
| T |
166583 |
tcaagtttgagaacaa |
166598 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 31 - 139
Target Start/End: Complemental strand, 24112323 - 24112215
Alignment:
| Q |
31 |
atgcaaatcttctaggataggacaagcattgagaaaatttatgtaatcatcccgattttcaaaagaaactgatgtcagatttagggttttgagtgatgga |
130 |
Q |
| |
|
||||||||||| ||| |||||||||||||| |||| || ||| |||||| | |||||||| || |||| || ||| | |||| ||||||| |||||| |
|
|
| T |
24112323 |
atgcaaatcttgtagaataggacaagcattaagaagcttaatgaaatcattctgattttcacaacaaacatatttcaaacctaggattttgagagatgga |
24112224 |
T |
 |
| Q |
131 |
agatgaaca |
139 |
Q |
| |
|
|||| |||| |
|
|
| T |
24112223 |
agatcaaca |
24112215 |
T |
 |
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