View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13144_high_5 (Length: 353)
Name: NF13144_high_5
Description: NF13144
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13144_high_5 |
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Alignment Details
Target: chr7 (Bit Score: 302; Significance: 1e-170; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 302; E-Value: 1e-170
Query Start/End: Original strand, 7 - 328
Target Start/End: Complemental strand, 46975756 - 46975435
Alignment:
| Q |
7 |
cttcaaattcataaaaaccaaaaatcattgaaccaattaaattctatttataatttattctgtaacaataaaatatattatcgtcattttttgcttgagg |
106 |
Q |
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|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
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| T |
46975756 |
cttcaaattcataaaaaccacaaatcattgaaccaattaaattctatttataatttattctgtaacaataaaatatattattgtcattttttgcttgagg |
46975657 |
T |
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| Q |
107 |
aggaaaagcttaccgaaagatacctatataattgcttgtccaagaccaaacaaccagccctacactgctgcaaatgaaaaaaggtaaagaaacccaagat |
206 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
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| T |
46975656 |
aggaaaagcttaccgaaagatacctatataattgcttgtccaagaccaaacaaccagccctgcactgctgcaaatgaaaaaaggtaaagaaacccaagat |
46975557 |
T |
|
| Q |
207 |
gcatgactaatcccagcaagtagttgtacagcaggcaacaaaaaacagctcaatttcttgagatgatatcctgcaacccaaaaaccaacatcaataatta |
306 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||| |
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| T |
46975556 |
gcatgactaatcccagcaagtagttgtacagcaggcaacaaaaaacagcacaatttcttgagatgagatcctgcaacccaaaaaccaacatcaataatta |
46975457 |
T |
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| Q |
307 |
ttccatagatacaaagaaatcg |
328 |
Q |
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|||||||||||||||||||||| |
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| T |
46975456 |
ttccatagatacaaagaaatcg |
46975435 |
T |
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