View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13145_low_4 (Length: 410)
Name: NF13145_low_4
Description: NF13145
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13145_low_4 |
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Alignment Details
Target: chr2 (Bit Score: 90; Significance: 2e-43; HSPs: 2)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 257 - 346
Target Start/End: Original strand, 26410231 - 26410320
Alignment:
| Q |
257 |
atgttactacaattactattcttattcctgttctttccattttcaacaacatcattaaacatatggccaaaaccaagaaacctcacgtgg |
346 |
Q |
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| T |
26410231 |
atgttactacaattactattcttattcctgttctttccattttcaacaacatcattaaacatatggccaaaaccaagaaacctcacgtgg |
26410320 |
T |
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Target: chr2; HSP #2
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 93 - 185
Target Start/End: Original strand, 26410067 - 26410159
Alignment:
| Q |
93 |
ttgactcttaactcaaaagtccttcagttctcaatatcacacctatcctcatgacatcatccccaccatgcaaatcctccataaatatcacac |
185 |
Q |
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| T |
26410067 |
ttgactcttaactcaaaagtccttcagttctcaatatcacacctatcctcatgacatcatccccaccatgcaaatcctccataaataccacac |
26410159 |
T |
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