View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF13147_low_2 (Length: 550)
Name: NF13147_low_2
Description: NF13147
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13147_low_2 |
 | |
|
| [»] scaffold0083 (1 HSPs) |
| | |
|
| [»] scaffold0002 (2 HSPs) |
| | |
|
Alignment Details
Target: chr3 (Bit Score: 267; Significance: 1e-149; HSPs: 32)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 12 - 518
Target Start/End: Original strand, 10361333 - 10361839
Alignment:
| Q |
12 |
tgaagacctttctgtaatataaatggaatccagacttctgcaatcataaatgtaaagtgtttggagcacagggaaaccattaagtgggaaggatgtaagt |
111 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||| || |||||| ||| ||||||| ||||| |||||||||||| ||||| |||||||||||| |
|
|
| T |
10361333 |
tgaagacctttctgaaatataaatggaatccagactcctacaatcacgtatggtaagtgttcggagcgcagggaaaccatcgagtggaaaggatgtaagt |
10361432 |
T |
|
| Q |
112 |
tcatcacagctgctccataactcaagactgacaagtgatgtgtaattgctccacgtttcaggaggtaggaaggataaattctcacaatttacaatttcaa |
211 |
Q |
| |
|
| ||||||| ||| | ||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| | || |
|
|
| T |
10361433 |
gaaccacagctatgatctaaatgtagagtcacaagtgatgtgtaattgctccacgtttcaggaggtaggaaggataaattctcacaattttcaatatgaa |
10361532 |
T |
|
| Q |
212 |
gtgattgcaatgaagtgggtagaccacttgatggaaatgcagtnnnnnnnnnnnnnnnnnnnnntctcaagtgtgtaagacaagtgcttctcaaaatcaa |
311 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||||| || |||| ||||||||||||||||||||| |||||| |
|
|
| T |
10361533 |
gtgattgcaatgaagtgggtagaccacttgagggaaatgcagtgagagaagaaagattaccgagtcccaagagtgtaagacaagtgcttctcagaatcaa |
10361632 |
T |
|
| Q |
312 |
ttttggcacatatgacagcatagcgcacttttcaatcactgcatgttgcatcatacatggagaatcactcccaagaaatgacaattgggtccttccatca |
411 |
Q |
| |
|
|||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
10361633 |
ttttggcacagatgacagcatagcgcacttttgaatcactgcatgttgcatcatacatggagaatcgctcccaagaaatgacaattgggtccttccatca |
10361732 |
T |
|
| Q |
412 |
agcccatcaatcttaaannnnnnnattgacgacaaccaatgcaaagtgggctctgtttccaatagatgagaacaaccttctatttcaatttcttctatgc |
511 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||| |
|
|
| T |
10361733 |
agcccatcaatcttaaaattttttattgacgacaaccaatgcaaagtgggctctgtttccaatagatgagaacaaccttgtattacaatttcttctatgc |
10361832 |
T |
|
| Q |
512 |
aaggaag |
518 |
Q |
| |
|
||||||| |
|
|
| T |
10361833 |
aaggaag |
10361839 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 12 - 518
Target Start/End: Original strand, 10431573 - 10432082
Alignment:
| Q |
12 |
tgaagacctttctgtaatataaatggaatccagacttctgcaatcataaatgtaaagtgtttggagcacagggaaaccattaagtgggaaggatgtaagt |
111 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||||||||| | | |||| |||| |||||| |||||||||||| ||||| |||||||||||| |
|
|
| T |
10431573 |
tgaagacctttctgaaatataaatggaatccagacttctgcaattaaatatgtcaagtaattggagggcagggaaaccatcgagtggaaaggatgtaagt |
10431672 |
T |
|
| Q |
112 |
tcatcacagctgctccataactcaagactgacaagtgatgtgtaattgctccacgtttcaggaggtaggaaggataaattctcacaatttacaatttcaa |
211 |
Q |
| |
|
|||||| ||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| |
|
|
| T |
10431673 |
gaatcacaactgctccataaataaagactgacaagtgatgtgtaattgctccacgtttcaggaggtaggaaggataaattctcacatttttcaatttcaa |
10431772 |
T |
|
| Q |
212 |
gtgattgcaatgaagtgggtagaccacttgatggaaatgcagtnnnnnnnnnnnnnnnnnnnnntctcaagtgtgtaagacaagtgcttctcaaaatcaa |
311 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||| |
|
|
| T |
10431773 |
gtgattgcaatgaagtgggtagaccacttgatggaaatgcagtgagagaagaaagagaatcgagtctcaagtgtgtaagacaagtgcttctcagaatcaa |
10431872 |
T |
|
| Q |
312 |
ttttggcacatatgacagcatagcgcacttttcaatcactgcatgttgcatcatacatggagaatcactcccaagaaatgacaattgggtccttccatca |
411 |
Q |
| |
|
|||||||||| | | ||| || | || |||||||||||| |||||||||||||||| |||||||||||| |||| |||||||| | ||||||||| ||| |
|
|
| T |
10431873 |
ttttggcacaactaatagcttaacacagttttcaatcactacatgttgcatcatacacggagaatcactctcaagcaatgacaaattggtccttccgtca |
10431972 |
T |
|
| Q |
412 |
agcccatcaatcttaaannnnnnnattgacgacaaccaatgcaaagtg---ggctctgtttccaatagatgagaacaaccttctatttcaatttcttcta |
508 |
Q |
| |
|
||||||| || |||| ||||||||||||||||||| |||| ||||||||||||| ||| |||||||||||| ||| ||||||||||||| |
|
|
| T |
10431973 |
agcccattgatattaactttctttattgacgacaaccaatgcatagtgtttggctctgtttccagtagttgagaacaacctgatatatcaatttcttcta |
10432072 |
T |
|
| Q |
509 |
tgcaaggaag |
518 |
Q |
| |
|
|||||||||| |
|
|
| T |
10432073 |
tgcaaggaag |
10432082 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 65 - 532
Target Start/End: Complemental strand, 10583095 - 10582627
Alignment:
| Q |
65 |
aaagtgtttggagcacagggaaaccattaagtgggaaggatgtaagttcatcacagctgctccataactcaagactgacaagtgatgtgtaattgctcca |
164 |
Q |
| |
|
|||||||| ||||| |||||||||||| |||||| |||||||||||| ||||||||| | | |||| |||||| |||||||||||||| |||||||| |
|
|
| T |
10583095 |
aaagtgttcggagcgcagggaaaccatcaagtggaaaggatgtaagtgaatcacagctacgatagaactaaagactcacaagtgatgtgtagttgctcca |
10582996 |
T |
|
| Q |
165 |
cgtttcaggaggtaggaaggataaattctcacaatttacaatttcaagtgattgcaatgaagtgggtagaccacttgatggaaatgcagtnnnnnnnnnn |
264 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| | || | ||||||||||||||||||||||||||||||||| ||||||| ||| |
|
|
| T |
10582995 |
cgtttcaggaggtaggaaggataaattctcacaattttcgatatgaagtgattgcaatgaagtgggtagaccacttgagggaaatgtagtgagagaagaa |
10582896 |
T |
|
| Q |
265 |
nnnnnnnnnnntctcaagtgtgtaagacaagtgcttctcaaaatcaattttggcacatatgacagcatagcgcacttttcaatcactgcatgttgcatca |
364 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||||| | | || || |||| ||| | |||||||||| |||||||| |
|
|
| T |
10582895 |
agagaatagagtctcaagtgtgtaagacaagtgcttctcagaatcaattttggcacagctaataggttaacgcagtttgccatcactgcatcttgcatca |
10582796 |
T |
|
| Q |
365 |
tacatggagaatcactcccaagaaatgacaattgggtccttccatcaagcccatcaatcttaa-annnnnnnattgacgacaaccaatgcaaagtgggct |
463 |
Q |
| |
|
|||| |||||||||||| |||| ||| |||||||||||||| || |||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
10582795 |
tacacggagaatcactctcaagcaataacaattgggtcctttcaccaagcccatcaatcttaatttttttttattgacgacaaccaatgcaaagtgggct |
10582696 |
T |
|
| Q |
464 |
ctgtttccaatagatgagaacaaccttctatttcaatttcttctatgcaaggaagatgactaggcaaat |
532 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
10582695 |
ctgtttccaatagatgaacacaaccttctatttcaatttcttctatgcaaggaagatggctaggcaaat |
10582627 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 12 - 532
Target Start/End: Complemental strand, 10263238 - 10262715
Alignment:
| Q |
12 |
tgaagacctttctgtaatataaatggaatccagacttctgcaatcataaatgtaaagtgtttggagcacagggaaaccattaagtgggaaggatgtaagt |
111 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||| || | ||| |||| |||||||||||| |||||||||||| ||||| |||||||||||| |
|
|
| T |
10263238 |
tgaagacctttctaaaatataaatggaatccagacttctacacttatatatgtcaagtgtttggagggcagggaaaccatcgagtggaaaggatgtaagt |
10263139 |
T |
|
| Q |
112 |
tcatcacagctgctccataactcaagactgacaagtgatgtgtaattgctccacgtttcaggaggtaggaaggataaattctcacaatttacaatttcaa |
211 |
Q |
| |
|
||||||||| | |||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
10263138 |
gaatcacagctacgatttaactcaagactcacaagtgatgtgtaattgctccacgtttcaggaggaaggaaggataaattctcacaatttacaatttcaa |
10263039 |
T |
|
| Q |
212 |
gtgattgcaatgaagtgggtagaccacttgatggaaatgcagtnnnnnnnnnnnnnnnnnnnnntctcaagtgtgtaagacaagtgcttctcaaaatcaa |
311 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||| ||| | |||||||||| |||||||||||||||| |||||| |
|
|
| T |
10263038 |
gtgattgcaatgaagtgggtagaccacttgagggaaatgtagtgagagaaggaagagaactgagtttcaagtgtgttagacaagtgcttctcagaatcaa |
10262939 |
T |
|
| Q |
312 |
ttttggcacatatgacagcatagcgcacttttcaatcactgcatgttgcatcatacatggagaatcactcccaagaaatgacaattgggtccttccatca |
411 |
Q |
| |
|
|||||| ||| | | | | || | || | ||| ||| | | |||||||||||| |||||||||||| |||| |||||||||||||||||||||||| |
|
|
| T |
10262938 |
ttttggaacagctaataacttaacacattcacgaataactacttcttgcatcatacacggagaatcactctcaagcaatgacaattgggtccttccatca |
10262839 |
T |
|
| Q |
412 |
agcccatcaatcttaaannnnnnnattgacgacaaccaatgcaaagtg---ggctctgtttccaatagatgagaacaaccttctatttcaatttcttcta |
508 |
Q |
| |
|
|||||||| || |||| | |||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||| |||||||||||| |
|
|
| T |
10262838 |
agcccatcgatattaattttctttactgacgacaaccaatgcaaagtgtttggctctgtttccaatagatgagaacaaccttttattacaatttcttcta |
10262739 |
T |
|
| Q |
509 |
tgcaaggaagatgactaggcaaat |
532 |
Q |
| |
|
|||||||||| | |||||||||| |
|
|
| T |
10262738 |
tgcaaggaagtttgctaggcaaat |
10262715 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 12 - 518
Target Start/End: Complemental strand, 9841395 - 9840889
Alignment:
| Q |
12 |
tgaagacctttctgtaatataaatggaatccagacttctgcaatcataaatgtaaagtgtttggagcacagggaaaccattaagtgggaaggatgtaagt |
111 |
Q |
| |
|
|||||||||||||| ||||||||||||||| ||||| || |||||| ||| ||||||||||||| |||||||||||| ||||||||||||||||||| |
|
|
| T |
9841395 |
tgaagacctttctgaaatataaatggaatctagactcctacaatcaagtatggtaagtgtttggagcgcagggaaaccatcaagtgggaaggatgtaagt |
9841296 |
T |
|
| Q |
112 |
tcatcacagctgctccataactcaagactgacaagtgatgtgtaattgctccacgtttcaggaggtaggaaggataaattctcacaatttacaatttcaa |
211 |
Q |
| |
|
||||||||| | |||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||| | || |
|
|
| T |
9841295 |
gtatcacagctccaccataactgaagactcacaagtgatgtgtaattgctccacgtttcaggaggtaggaaggataaattctcacaactacgaatatgaa |
9841196 |
T |
|
| Q |
212 |
gtgattgcaatgaagtgggtagaccacttgatggaaatgcagtnnnnnnnnnnnnnnnnnnnnntctcaagtgtgtaagacaagtgcttctcaaaatcaa |
311 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| |||||| |
|
|
| T |
9841195 |
gtgattgcaatgaagtgggtagaccacttgagggaaatgcagtgagagaagaaagagaatcgagtctcaagtgtgtaagacaagtgcttctcagaatcaa |
9841096 |
T |
|
| Q |
312 |
ttttggcacatatgacagcatagcgcacttttcaatcactgcatgttgcatcatacatggagaatcactcccaagaaatgacaattgggtccttccatca |
411 |
Q |
| |
|
|||||| ||| | | || || | ||||||||||||||| ||| ||||||||||||||||||||||||| |||| ||||||||||||| ||| || || |
|
|
| T |
9841095 |
ttttggaacaactaatagtttaacacacttttcaatcactacatcttgcatcatacatggagaatcactctcaagcaatgacaattgggaactttcacca |
9840996 |
T |
|
| Q |
412 |
agcccatcaatcttaaannnnnnnattgacgacaaccaatgcaaagtgggctctgtttccaatagatgagaacaaccttctatttcaatttcttctatgc |
511 |
Q |
| |
|
||||||| || || | ||||| ||||||||||||| ||| | ||||||||||||||||||||||||| |||| |||||| ||||||| |
|
|
| T |
9840995 |
agcccattgatattcattttttttattgaagacaaccaatgcagagtagatggtgtttccaatagatgagaacaacctgatattacaattttttctatgg |
9840896 |
T |
|
| Q |
512 |
aaggaag |
518 |
Q |
| |
|
||||||| |
|
|
| T |
9840895 |
aaggaag |
9840889 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 12 - 518
Target Start/End: Complemental strand, 9852276 - 9851770
Alignment:
| Q |
12 |
tgaagacctttctgtaatataaatggaatccagacttctgcaatcataaatgtaaagtgtttggagcacagggaaaccattaagtgggaaggatgtaagt |
111 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||| ||||||| ||||| |||||||||||||||||||||||||| ||||| |||||| ||||| |
|
|
| T |
9852276 |
tgaagacctttctaaaatataaatggaatccagacttctccaatcatcaatgtcaagtgtttggagcacagggaaaccatcgagtggaaaggatttaagt |
9852177 |
T |
|
| Q |
112 |
tcatcacagctgctccataactcaagactgacaagtgatgtgtaattgctccacgtttcaggaggtaggaaggataaattctcacaatttacaatttcaa |
211 |
Q |
| |
|
||||||||| | | ||| |||||| |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| |||| |||| |
|
|
| T |
9852176 |
gaatcacagctacgatagaaccgaagactcacaagtgatgtgtagttgctccatgtttcaggaggtaggaaggataaattctcacaattttcaatatcaa |
9852077 |
T |
|
| Q |
212 |
gtgattgcaatgaagtgggtagaccacttgatggaaatgcagtnnnnnnnnnnnnnnnnnnnnntctcaagtgtgtaagacaagtgcttctcaaaatcaa |
311 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||| |||||| |
|
|
| T |
9852076 |
gtgattgcaatgaagtgggtagaccacttgatggaaatgcattgagagaagaaagtgaatcgagtctcaagtgtgtaagacaagtgcttctcataatcaa |
9851977 |
T |
|
| Q |
312 |
ttttggcacatatgacagcatagcgcacttttcaatcactgcatgttgcatcatacatggagaatcactcccaagaaatgacaattgggtccttccatca |
411 |
Q |
| |
|
|||||||||| | | ||| || | |||||||||||| || ||| |||||||||||| |||||||||||| |||| ||||||||||||| ||| || || |
|
|
| T |
9851976 |
ttttggcacagctaatagcttaacacacttttcaatctctacatcttgcatcatacacggagaatcactctcaagcaatgacaattgggaactttcacca |
9851877 |
T |
|
| Q |
412 |
agcccatcaatcttaaannnnnnnattgacgacaaccaatgcaaagtgggctctgtttccaatagatgagaacaaccttctatttcaatttcttctatgc |
511 |
Q |
| |
|
||||||| || || | ||||| ||||||||| ||| ||| | ||||||||||||||||||||||||| |||| |||||||||||||| |
|
|
| T |
9851876 |
agcccattgatattcattttttttattgaagacaaccaacgcagagtagatggtgtttccaatagatgagaacaacctgatattacaatttcttctatgg |
9851777 |
T |
|
| Q |
512 |
aaggaag |
518 |
Q |
| |
|
||||||| |
|
|
| T |
9851776 |
aaggaag |
9851770 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 12 - 518
Target Start/End: Complemental strand, 10129462 - 10128956
Alignment:
| Q |
12 |
tgaagacctttctgtaatataaatggaatccagacttctgcaatcataaatgtaaagtgtttggagcacagggaaaccattaagtgggaaggatgtaagt |
111 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||| || |||| || ||| ||||||||||||| |||||||||||| |||||| |||||||||||| |
|
|
| T |
10129462 |
tgaagacctttctgaaatataaatggaatccagactcctacaattatgtatggtaagtgtttggagcgcagggaaaccatcaagtggaaaggatgtaagt |
10129363 |
T |
|
| Q |
112 |
tcatcacagctgctccataactcaagactgacaagtgatgtgtaattgctccacgtttcaggaggtaggaaggataaattctcacaatttacaatttcaa |
211 |
Q |
| |
|
||||||| || |||| ||| |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| | || |
|
|
| T |
10129362 |
gcatcacaactactccgtaaatcaatactcacaagtgatgtgtaattgctccacgtttcaggaggtaggaaggataaattctcacatttttcaatatgaa |
10129263 |
T |
|
| Q |
212 |
gtgattgcaatgaagtgggtagaccacttgatggaaatgcagtnnnnnnnnnnnnnnnnnnnnntctcaagtgtgtaagacaagtgcttctcaaaatcaa |
311 |
Q |
| |
|
|||||||||||||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||||| ||| |||||| |
|
|
| T |
10129262 |
gtgattgcaatgaagtgggtagtccacttgagggaaatgcagtgagagaagaaagagaatagagtctcaagtgtgtaagacaagtgcttttcagaatcaa |
10129163 |
T |
|
| Q |
312 |
ttttggcacatatgacagcatagcgcacttttcaatcactgcatgttgcatcatacatggagaatcactcccaagaaatgacaattgggtccttccatca |
411 |
Q |
| |
|
|||||||||| | | ||| ||| || || | |||| || |||||||||||||||| |||||||||||| |||| ||||||||||||| ||| || || |
|
|
| T |
10129162 |
ttttggcacagctaatagcttagaacagttgtgaatcgctacatgttgcatcatacacggagaatcactctcaagcaatgacaattgggaactttcacca |
10129063 |
T |
|
| Q |
412 |
agcccatcaatcttaaannnnnnnattgacgacaaccaatgcaaagtgggctctgtttccaatagatgagaacaaccttctatttcaatttcttctatgc |
511 |
Q |
| |
|
||||||| || || | ||||| ||||||||||||| ||| | ||||||||||||||||||||||||| |||| |||||||||||||| |
|
|
| T |
10129062 |
agcccattgatattcattttttttattgaagacaaccaatgcagagtagatggtgtttccaatagatgagaacaacctgatattacaatttcttctatgg |
10128963 |
T |
|
| Q |
512 |
aaggaag |
518 |
Q |
| |
|
||||||| |
|
|
| T |
10128962 |
aaggaag |
10128956 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 27 - 518
Target Start/End: Original strand, 11779529 - 11780020
Alignment:
| Q |
27 |
aatataaatggaatccagacttctgcaatcataaatgtaaagtgtttggagcacagggaaaccattaagtgggaaggatgtaagttcatcacagctgctc |
126 |
Q |
| |
|
||||||||||||||||||||| || |||||| | || |||||||||||||||||||||||||| ||||||||||||||||||| ||||||| || ||| |
|
|
| T |
11779529 |
aatataaatggaatccagactcctacaatcacttaagtcaagtgtttggagcacagggaaaccatcaagtgggaaggatgtaagtgcatcacaactactc |
11779628 |
T |
|
| Q |
127 |
cataactcaagactgacaagtgatgtgtaattgctccacgtttcaggaggtaggaaggataaattctcacaatttacaatttcaagtgattgcaatgaag |
226 |
Q |
| |
|
||||| | |||||| |||||||| |||||||||||||||||||||| |||||| |||||||| |||||||||| | ||| | ||||||||||||||||| |
|
|
| T |
11779629 |
cataaataaagactcacaagtgaagtgtaattgctccacgtttcagaaggtagaaaggataagttctcacaatctttaatatgaagtgattgcaatgaag |
11779728 |
T |
|
| Q |
227 |
tgggtagaccacttgatggaaatgcagtnnnnnnnnnnnnnnnnnnnnntctcaagtgtgtaagacaagtgcttctcaaaatcaattttggcacatatga |
326 |
Q |
| |
|
|||||||||||||||| ||||||||||| |||||||| |||||||||| |||||||||||||||||||||||||| ||| |
|
|
| T |
11779729 |
tgggtagaccacttgagggaaatgcagtgagagaagaaagagaatggagtctcaagtatgtaagacaaatgcttctcaaaatcaattttggcacaactga |
11779828 |
T |
|
| Q |
327 |
cagcatagcgcacttttcaatcactgcatgttgcatcatacatggagaatcactcccaagaaatgacaattgggtccttccatcaagcccatcaatctta |
426 |
Q |
| |
|
||| ||| ||||||||||||||| |||||||||||||| || |||||||||| |||| ||||||||||| ||| || || |||| || | || || |
|
|
| T |
11779829 |
tagctcagcacacttttcaatcactacatgttgcatcatagatagagaatcactatcaagcaatgacaattgtgtcttttcaccaagtcctttgatattc |
11779928 |
T |
|
| Q |
427 |
aannnnnnnattgacgacaaccaatgcaaagtgggctctgtttccaatagatgagaacaaccttctatttcaatttcttctatgcaaggaag |
518 |
Q |
| |
|
| ||||||||||||||||||||||| | | |||||||||||||||||||||||| |||| |||||||||| ||||||||||| |
|
|
| T |
11779929 |
atttcttttattgacgacaaccaatgcaaagtagatggtttttccaatagatgagaacaaccttttattacaatttcttcgatgcaaggaag |
11780020 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 12 - 518
Target Start/End: Complemental strand, 10520022 - 10519516
Alignment:
| Q |
12 |
tgaagacctttctgtaatataaatggaatccagacttctgcaatcataaatgtaaagtgtttggagcacagggaaaccattaagtgggaaggatgtaagt |
111 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||| ||||| ||| | ||| ||||||||||||| |||||||||||| ||||| |||||||||||| |
|
|
| T |
10520022 |
tgaagacctttctgaaatataaatggaatccagactcctgcactcacatatggtaagtgtttggagcgcagggaaaccatcgagtggaaaggatgtaagt |
10519923 |
T |
|
| Q |
112 |
tcatcacagctgctccataactcaagactgacaagtgatgtgtaattgctccacgtttcaggaggtaggaaggataaattctcacaatttacaatttcaa |
211 |
Q |
| |
|
||||||||| | | |||| |||||| |||||||||||||||||| |||||||||||||||| ||||||||||||||||||||| | ||| | || |
|
|
| T |
10519922 |
gtatcacagctacgatagaacttaagactcacaagtgatgtgtaattgatccacgtttcaggaggaaggaaggataaattctcacaacattgaatattaa |
10519823 |
T |
|
| Q |
212 |
gtgattgcaatgaagtgggtagaccacttgatggaaatgcagtnnnnnnnnnnnnnnnnnnnnntctcaagtgtgtaagacaagtgcttctcaaaatcaa |
311 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||||| || |||||||||||||||||||||| ||| |||||| |
|
|
| T |
10519822 |
gtgattgcaatgaagtgggtagaccacttgagggaaatgcagtgagagaagaaagagaatcgagtcccaagtgtgtaagacaagtgcttttcagaatcaa |
10519723 |
T |
|
| Q |
312 |
ttttggcacatatgacagcatagcgcacttttcaatcactgcatgttgcatcatacatggagaatcactcccaagaaatgacaattgggtccttccatca |
411 |
Q |
| |
|
|||||||||| | | ||| || | ||||||| |||| || ||| |||||||||||| |||||||||||| |||| ||||||||||||| ||| || || |
|
|
| T |
10519722 |
ttttggcacagctaatagcttaacacactttttaatctctacatcttgcatcatacaaggagaatcactctcaagcaatgacaattgggaactttcacca |
10519623 |
T |
|
| Q |
412 |
agcccatcaatcttaaannnnnnnattgacgacaaccaatgcaaagtgggctctgtttccaatagatgagaacaaccttctatttcaatttcttctatgc |
511 |
Q |
| |
|
||||||| || || | ||||| ||||||||||||||||| | |||||||||||||||| |||||||| |||| |||||||||||||| |
|
|
| T |
10519622 |
agcccattgatattcattttttttattgaagacaaccaatgcaaagtagatggtgtttccaatagatgaacacaaccttttattacaatttcttctatgg |
10519523 |
T |
|
| Q |
512 |
aaggaag |
518 |
Q |
| |
|
||||||| |
|
|
| T |
10519522 |
aaggaag |
10519516 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 12 - 518
Target Start/End: Complemental strand, 10034540 - 10034031
Alignment:
| Q |
12 |
tgaagacctttctgtaatataaatggaatccagacttctgcaatcataaatgtaaagtgtttggagcacagggaaaccattaagtgggaaggatgtaagt |
111 |
Q |
| |
|
|||||||||||||| ||||||||||||| ||||||| || |||| | || | |||||||||||| ||||||||||||| |||||| |||||||||||| |
|
|
| T |
10034540 |
tgaagacctttctgaaatataaatggaaaccagactcctacaattccatatctgaagtgtttggaggacagggaaaccatcaagtggaaaggatgtaagt |
10034441 |
T |
|
| Q |
112 |
tcatcacagctgctccataactcaagactgacaagtgatgtgtaattgctccacgtttcaggaggtaggaaggataaattctcacaatttacaatttcaa |
211 |
Q |
| |
|
||||||| || ||| | |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | || |
|
|
| T |
10034440 |
gcatcacaactatgaattaaataaagactcacaagtgatgtgtaattgctccacgtttcaggaggtaggaaggataaattctcacattttacaatatgaa |
10034341 |
T |
|
| Q |
212 |
gtgattgcaatgaagtgggtagaccacttgatggaaatgcagtnnnnnnnnnnnnnnnnnnnnntctcaagtgtgtaagacaagtgcttctcaaaatcaa |
311 |
Q |
| |
|
|||||||||||||||||||||| |||||||| ||||||||||| | ||||||||||||||||||||||||||||||||| |
|
|
| T |
10034340 |
gtgattgcaatgaagtgggtagtccacttgagggaaatgcagtgagagaagaaagagaattgagttccaagtgtgtaagacaagtgcttctcaaaatcaa |
10034241 |
T |
|
| Q |
312 |
ttttggcacatatgacagcatagcgcacttttcaatcactgcatgttgcatcatacatggagaatcactcccaagaaatgacaattgggtccttcca--- |
408 |
Q |
| |
|
|||||||||| | | ||| ||| || || | |||| || |||||||||||||||| |||||||||||| |||| ||||||| ||||| ||| || |
|
|
| T |
10034240 |
ttttggcacagctaatagcttagaacagttgtgaatcgctacatgttgcatcatacacggagaatcactctcaagcaatgacagttgggaactttcactc |
10034141 |
T |
|
| Q |
409 |
tcaagcccatcaatcttaaannnnnnnattgacgacaaccaatgcaaagtgggctctgtttccaatagatgagaacaaccttctatttcaatttcttcta |
508 |
Q |
| |
|
|||||||||| || || | ||||| ||||||||||||| ||| | ||||||||||||||||||||||||| |||| |||||| ||||| |
|
|
| T |
10034140 |
tcaagcccattgatattcattttttttattgaagacaaccaatgcagagtagatggtgtttccaatagatgagaacaacctgatattacaattttttcta |
10034041 |
T |
|
| Q |
509 |
tgcaaggaag |
518 |
Q |
| |
|
|| ||||||| |
|
|
| T |
10034040 |
tggaaggaag |
10034031 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 12 - 532
Target Start/End: Complemental strand, 10091331 - 10090808
Alignment:
| Q |
12 |
tgaagacctttctgtaatataaatggaatccagacttctgcaatcataaatgtaaagtgtttggagcacagggaaaccattaagtgggaaggatgtaagt |
111 |
Q |
| |
|
||||||| ||||| || || ||||||||||||||| || ||| ||| ||| ||||| || |||| |||||||||||| |||||| |||||||||||| |
|
|
| T |
10091331 |
tgaagacatttctaaaacattaatggaatccagactactacaaccatctatggtaagtgatttgagcgcagggaaaccatcaagtggaaaggatgtaagt |
10091232 |
T |
|
| Q |
112 |
tcatcacagctgctccataactcaagactgacaagtgatgtgtaattgctccacgtttcaggaggtaggaaggataaattctcacaatttacaatttcaa |
211 |
Q |
| |
|
|||||||||| | ||| | ||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| | ||||||||| |
|
|
| T |
10091231 |
gcatcacagctatgacttaaataaagtctcacaagtgatgtgtaattgctccacgtttcaggaggtaggaaggataaattcaaacaaaattcaatttcaa |
10091132 |
T |
|
| Q |
212 |
gtgattgcaatgaagtgggtagaccacttgatggaaatgcagtnnnnnnnnnnnnnnnnnnnnntctcaagtgtgtaagacaagtgcttctcaaaatcaa |
311 |
Q |
| |
|
|||||||||||||||||||||||||||||| || ||||| | | |||||||| ||||||||||||||| ||||| |
|
|
| T |
10091131 |
ttgattgcaatgaagtgggtagaccacttgagggtaatgcggcgatagatgaaagagaatagagtttcaagtgttgaagacaagtgcttcttggaatcat |
10091032 |
T |
|
| Q |
312 |
ttttggcacatatgacagcatagcgcacttttcaatcactgcatgttgcatcatacatggagaatcactcccaagaaatgacaattgggtccttccatca |
411 |
Q |
| |
|
|||||||| | | | ||| |||| |||||| ||||||| ||| || |||||||||||||||||||||| |||| |||||||||||||||||| || || |
|
|
| T |
10091031 |
ttttggcatagctaatagcttagcacactttcgaatcactacatcttccatcatacatggagaatcactctcaagcaatgacaattgggtcctttcacca |
10090932 |
T |
|
| Q |
412 |
agcccatcaatcttaaannnnnnnattgacgacaaccaatgcaaagtg---ggctctgtttccaatagatgagaacaaccttctatttcaatttcttcta |
508 |
Q |
| |
|
| |||||| || |||| | |||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||| ||||||||| || |
|
|
| T |
10090931 |
aacccatcgatattaattttctttactgacgacaaccaatgcaaagtgtttggctctgtttccaatagatgagaacaaccttttattacaatttctttta |
10090832 |
T |
|
| Q |
509 |
tgcaaggaagatgactaggcaaat |
532 |
Q |
| |
|
|||||||||| | |||||||||| |
|
|
| T |
10090831 |
tgcaaggaaggttgctaggcaaat |
10090808 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 138; E-Value: 7e-72
Query Start/End: Original strand, 12 - 532
Target Start/End: Complemental strand, 10198213 - 10197690
Alignment:
| Q |
12 |
tgaagacctttctgtaatataaatggaatccagacttctgcaatcataaatgtaaagtgtttggagcacagggaaaccattaagtgggaaggatgtaagt |
111 |
Q |
| |
|
||||||| ||||| || || ||||||||||||||| || ||| ||| ||| ||||| || |||| |||||||||||| |||||| |||||||||||| |
|
|
| T |
10198213 |
tgaagacatttctaaaacattaatggaatccagactactacaaccatctatggtaagtgatttgagcgcagggaaaccatcaagtggaaaggatgtaagt |
10198114 |
T |
|
| Q |
112 |
tcatcacagctgctccataactcaagactgacaagtgatgtgtaattgctccacgtttcaggaggtaggaaggataaattctcacaatttacaatttcaa |
211 |
Q |
| |
|
|||||||||| | ||| | ||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| | ||||||||| |
|
|
| T |
10198113 |
gcatcacagctatgacttaaataaagtctcacaagtgatgtgtaattgctccacgtttcaggaggtaggaaggataaattcaaacaaaattcaatttcaa |
10198014 |
T |
|
| Q |
212 |
gtgattgcaatgaagtgggtagaccacttgatggaaatgcagtnnnnnnnnnnnnnnnnnnnnntctcaagtgtgtaagacaagtgcttctcaaaatcaa |
311 |
Q |
| |
|
|||||||||||||||||||||||||||||| || ||||| | | |||||||| ||||||||||||||| ||||| |
|
|
| T |
10198013 |
ttgattgcaatgaagtgggtagaccacttgagggtaatgcggcgatagatgaaagagaatagagtttcaagtgttgaagacaagtgcttcttggaatcat |
10197914 |
T |
|
| Q |
312 |
ttttggcacatatgacagcatagcgcacttttcaatcactgcatgttgcatcatacatggagaatcactcccaagaaatgacaattgggtccttccatca |
411 |
Q |
| |
|
|||||||| | | | ||| |||| |||||| ||||||| ||| || ||||||||| |||||||||||| |||| |||||||||||||||||| || || |
|
|
| T |
10197913 |
ttttggcatagctaatagcttagcacactttcgaatcactacatcttccatcatacacggagaatcactctcaagcaatgacaattgggtcctttcacca |
10197814 |
T |
|
| Q |
412 |
agcccatcaatcttaaannnnnnnattgacgacaaccaatgcaaagtg---ggctctgtttccaatagatgagaacaaccttctatttcaatttcttcta |
508 |
Q |
| |
|
| |||||| || |||| | |||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||| ||||||||| || |
|
|
| T |
10197813 |
aacccatcgatattaattttctttactgacgacaaccaatgcaaagtgtttggctctgtttccaatagatgagaacaaccttttattacaatttctttta |
10197714 |
T |
|
| Q |
509 |
tgcaaggaagatgactaggcaaat |
532 |
Q |
| |
|
|||||||||| | |||||||||| |
|
|
| T |
10197713 |
tgcaaggaaggttgctaggcaaat |
10197690 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 66 - 411
Target Start/End: Original strand, 13853047 - 13853392
Alignment:
| Q |
66 |
aagtgtttggagcacagggaaaccattaagtgggaaggatgtaagttcatcacagctgctccataactcaagactgacaagtgatgtgtaattgctccac |
165 |
Q |
| |
|
|||| ||||||| |||||||||||| |||| |||||||||||||| |||||||||| |||| ||| |||||| |||| ||||||||||||||||| |
|
|
| T |
13853047 |
aagtctttggagtgcagggaaaccatcaagttggaaggatgtaagtgcatcacagctactccgtaaagtaagactcgcaagcgatgtgtaattgctccat |
13853146 |
T |
|
| Q |
166 |
gtttcaggaggtaggaaggataaattctcacaatttacaatttcaagtgattgcaatgaagtgggtagaccacttgatggaaatgcagtnnnnnnnnnnn |
265 |
Q |
| |
|
||||||||||| ||||| |||||||||||||| ||| | ||||||||||||||||||| ||| || ||||||||||| |||||| |||| |
|
|
| T |
13853147 |
gtttcaggaggaaggaatgataaattctcacatttttctatttcaagtgattgcaatggagttggcagaccacttgacggaaatacagtgagagatggaa |
13853246 |
T |
|
| Q |
266 |
nnnnnnnnnntctcaagtgtgtaagacaagtgcttctcaaaatcaattttggcacatatgacagcatagcgcacttttcaatcactgcatgttgcatcat |
365 |
Q |
| |
|
| |||||||| |||| ||||||||||||||||||||||||||| | ||||||||||| | ||||||||||||||||||||||||||| | |
|
|
| T |
13853247 |
tatcatagagtttcaagtgttgaagaaaagtgcttctcaaaatcaattttggcatagatgacagcataacacacttttcaatcactgcatgttgcatcgt |
13853346 |
T |
|
| Q |
366 |
acatggagaatcactcccaagaaatgacaattgggtccttccatca |
411 |
Q |
| |
|
|| |||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
13853347 |
gcaaggagaatcgctcccaagaaatgacaattgggtccttccatca |
13853392 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 12 - 518
Target Start/End: Complemental strand, 11771771 - 11771265
Alignment:
| Q |
12 |
tgaagacctttctgtaatataaatggaatccagacttctgcaatcataaatgtaaagtgtttggagcacagggaaaccattaagtgggaaggatgtaagt |
111 |
Q |
| |
|
||||||| ||||| || || ||||||||||||||| || ||| ||| ||| ||||| || |||| |||||||||||| |||||| |||||||||||| |
|
|
| T |
11771771 |
tgaagacatttctaaaacattaatggaatccagactactacaaccatctatggtaagtgatttgagcgcagggaaaccatcaagtggaaaggatgtaagt |
11771672 |
T |
|
| Q |
112 |
tcatcacagctgctccataactcaagactgacaagtgatgtgtaattgctccacgtttcaggaggtaggaaggataaattctcacaatttacaatttcaa |
211 |
Q |
| |
|
||||||| || |||||||| | |||||| |||||||| ||||||| |||||||||||||| |||||| |||||||| |||||||||| | ||| | || |
|
|
| T |
11771671 |
gcatcacaactactccataaataaagactcacaagtgaagtgtaatagctccacgtttcagaaggtagaaaggataagttctcacaatctttaatatgaa |
11771572 |
T |
|
| Q |
212 |
gtgattgcaatgaagtgggtagaccacttgatggaaatgcagtnnnnnnnnnnnnnnnnnnnnntctcaagtgtgtaagacaagtgcttctcaaaatcaa |
311 |
Q |
| |
|
|| |||||||||||||||||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||||||| |
|
|
| T |
11771571 |
gtatttgcaatgaagtgggtagaccacttgggggaaatgcagtgagagaagaaagagaatggagtctcaagtatgtaagacaagtgcttctcaaaatcaa |
11771472 |
T |
|
| Q |
312 |
ttttggcacatatgacagcatagcgcacttttcaatcactgcatgttgcatcatacatggagaatcactcccaagaaatgacaattgggtccttccatca |
411 |
Q |
| |
|
|||||||||| ||| ||| | | |||||||||||||| |||||||||||||| || |||||||||| |||| |||||||| || ||| || || || |
|
|
| T |
11771471 |
ttttggcacaactgatagctcaacatacttttcaatcactacatgttgcatcatagatagagaatcactatcaagcaatgacaactgtgtcttttcacca |
11771372 |
T |
|
| Q |
412 |
agcccatcaatcttaaannnnnnnattgacgacaaccaatgcaaagtgggctctgtttccaatagatgagaacaaccttctatttcaatttcttctatgc |
511 |
Q |
| |
|
|| || | || || | ||||||||||||||||||||||| | | |||||||||||||||||||||||| ||| |||||||||| |||| |
|
|
| T |
11771371 |
aggccgttgatattcatttcttttattgacgacaaccaatgcaaagtagatggtttttccaatagatgagaacaacctttgattacaatttcttcgatgc |
11771272 |
T |
|
| Q |
512 |
aaggaag |
518 |
Q |
| |
|
||||||| |
|
|
| T |
11771271 |
aaggaag |
11771265 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 65 - 254
Target Start/End: Complemental strand, 10665950 - 10665761
Alignment:
| Q |
65 |
aaagtgtttggagcacagggaaaccattaagtgggaaggatgtaagttcatcacagctgctccataactcaagactgacaagtgatgtgtaattgctcca |
164 |
Q |
| |
|
|||||||||||||| |||||||||||| |||||| |||||||||||| ||||||| || ||||| || |||| ||||||||||||||||||||||| |
|
|
| T |
10665950 |
aaagtgtttggagcgcagggaaaccatcaagtggaaaggatgtaagtgcatcacaactttgacataaatctagacgcacaagtgatgtgtaattgctcca |
10665851 |
T |
|
| Q |
165 |
cgtttcaggaggtaggaaggataaattctcacaatttacaatttcaagtgattgcaatgaagtgggtagaccacttgatggaaatgcagt |
254 |
Q |
| |
|
||||||||||||||||||||||||||||||||| | ||| | ||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
10665850 |
cgtttcaggaggtaggaaggataaattctcacaccacaaaatattaagtgattgcaatgaagtgggtagaccacttgagggaaatgcagt |
10665761 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 66 - 254
Target Start/End: Original strand, 10373428 - 10373616
Alignment:
| Q |
66 |
aagtgtttggagcacagggaaaccattaagtgggaaggatgtaagttcatcacagctgctccataactcaagactgacaagtgatgtgtaattgctccac |
165 |
Q |
| |
|
|||||||||||| ||||||||||||| |||||| |||||| ||||| ||||||||| | |||| | ||| | |||||||||||||||||||||||| |
|
|
| T |
10373428 |
aagtgtttggaggacagggaaaccatcaagtggaaaggatataagtgaatcacagctacgatataaataaagccacacaagtgatgtgtaattgctccac |
10373527 |
T |
|
| Q |
166 |
gtttcaggaggtaggaaggataaattctcacaatttacaatttcaagtgattgcaatgaagtgggtagaccacttgatggaaatgcagt |
254 |
Q |
| |
|
||||| |||| |||||||||||||||||||| | | ||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
10373528 |
atttcaagaggaaggaaggataaattctcacagtatctaatttcaagtgattgcaatgaagtgggtagaccacttgagggaaatgcagt |
10373616 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 60 - 237
Target Start/End: Complemental strand, 10503071 - 10502894
Alignment:
| Q |
60 |
aatgtaaagtgtttggagcacagggaaaccattaagtgggaaggatgtaagttcatcacagctgctccataactcaagactgacaagtgatgtgtaattg |
159 |
Q |
| |
|
||||| |||| ||||||| |||||||||||| |||||| |||||||| ||| |||||||||| |||||||| |||||||| ||||| ||||||||||| |
|
|
| T |
10503071 |
aatgttaagtctttggagtgcagggaaaccatcaagtggaaaggatgttagtccatcacagctactccataaatcaagactcacaagcaatgtgtaattg |
10502972 |
T |
|
| Q |
160 |
ctccacgtttcaggaggtaggaaggataaattctcacaatttacaatttcaagtgattgcaatgaagtgggtagacca |
237 |
Q |
| |
|
||||||||||||| ||| || ||||||||||||||||| || ||| |||||| ||||| ||||||||||||||| |
|
|
| T |
10502971 |
ctccacgtttcagcaggaagaaaggataaattctcacaccttttaatactaagtgactgcaaagaagtgggtagacca |
10502894 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 59 - 237
Target Start/End: Complemental strand, 10531151 - 10530973
Alignment:
| Q |
59 |
aaatgtaaagtgtttggagcacagggaaaccattaagtgggaaggatgtaagttcatcacagctgctccataactcaagactgacaagtgatgtgtaatt |
158 |
Q |
| |
|
||||||||||| || |||| |||||||||||| |||| |||||||||||||| |||||||||| |||||||| |||||| |||| |||||||| | |
|
|
| T |
10531151 |
aaatgtaaagtattcggagtgcagggaaaccatcaagttggaaggatgtaagtgcatcacagctactccataaaataagactctcaagcgatgtgtatct |
10531052 |
T |
|
| Q |
159 |
gctccacgtttcaggaggtaggaaggataaattctcacaatttacaatttcaagtgattgcaatgaagtgggtagacca |
237 |
Q |
| |
|
|||||||||||||||||| | ||| | ||| ||||||||||| |||| |||||| ||||||||||||||||||||| |
|
|
| T |
10531051 |
gctccacgtttcaggaggcatgaatgctaacttctcacaattatcaatacaaagtgactgcaatgaagtgggtagacca |
10530973 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 353 - 510
Target Start/End: Complemental strand, 10502779 - 10502622
Alignment:
| Q |
353 |
catgttgcatcatacatggagaatcactcccaagaaatgacaattgggtccttccatcaagcccatcaatcttaaannnnnnnattgacgacaaccaatg |
452 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||| ||||| ||||| ||| || || ||||||||| || ||| | |||||||| |||||| |
|
|
| T |
10502779 |
catgttgcatcatacatggagagtcactcccaagcaatgataattgagtcttttcaccaagcccattgatattaccttttttcaatgacgacagccaatg |
10502680 |
T |
|
| Q |
453 |
caaagtgggctctgtttccaatagatgagaacaaccttctatttcaatttcttctatg |
510 |
Q |
| |
|
|||||| ||| ||||||||||||||||| ||||||||||||| |||||||||||||| |
|
|
| T |
10502679 |
caaagtaggcggtgtttccaatagatgagcacaaccttctattacaatttcttctatg |
10502622 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 59 - 200
Target Start/End: Complemental strand, 10679950 - 10679809
Alignment:
| Q |
59 |
aaatgtaaagtgtttggagcacagggaaaccattaagtgggaaggatgtaagttcatcacagctgctccataactcaagactgacaagtgatgtgtaatt |
158 |
Q |
| |
|
||||||||||| || |||| |||||||||||| |||| |||||||||||||| |||||||||| |||||||| |||||| ||||| ||||| || | |
|
|
| T |
10679950 |
aaatgtaaagtattcggagtgcagggaaaccatcaagttggaaggatgtaagtgcatcacagctactccataaaataagactcacaagcgatgtatatct |
10679851 |
T |
|
| Q |
159 |
gctccacgtttcaggaggtaggaaggataaattctcacaatt |
200 |
Q |
| |
|
|||||||||||||||||| | ||| | ||| ||||||||||| |
|
|
| T |
10679850 |
gctccacgtttcaggaggcatgaatgctaacttctcacaatt |
10679809 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 145 - 254
Target Start/End: Original strand, 11244188 - 11244297
Alignment:
| Q |
145 |
agtgatgtgtaattgctccacgtttcaggaggtaggaaggataaattctcacaatttacaatttcaagtgattgcaatgaagtgggtagaccacttgatg |
244 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| | ||| | |||||||| ||| | ||||| |||||| ||||||||||||||| ||| | |
|
|
| T |
11244188 |
agtgatgtgtaattgctccacgtttcaggaggtaggaatgttaagctgtcacaattgcgaatatgaagtgtttgcaaagaagtgggtagaccatttgtag |
11244287 |
T |
|
| Q |
245 |
gaaatgcagt |
254 |
Q |
| |
|
|||||||||| |
|
|
| T |
11244288 |
gaaatgcagt |
11244297 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 436 - 532
Target Start/End: Complemental strand, 10665633 - 10665543
Alignment:
| Q |
436 |
attgacgacaaccaatgcaaagtgggctctgtttccaatagatgagaacaaccttctatttcaatttcttctatgcaaggaagatgactaggcaaat |
532 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||| |||||| || ||||| ||||||||||||||||| ||||||||||| |||||||||| |
|
|
| T |
10665633 |
attgacgacaaccaatgcaaagtgggacctgtttctaatagacga------ccttcaatttcaatttcttctatacaaggaagatggctaggcaaat |
10665543 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 279 - 346
Target Start/End: Complemental strand, 10665736 - 10665669
Alignment:
| Q |
279 |
caagtgtgtaagacaagtgcttctcaaaatcaattttggcacatatgacagcatagcgcacttttcaa |
346 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||||||| ||||||||||| | |||||||||| |
|
|
| T |
10665736 |
caagtgtgtaagacaagtgcttctcataatcaattttggcatggatgacagcataacacacttttcaa |
10665669 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 279 - 518
Target Start/End: Original strand, 10373641 - 10373883
Alignment:
| Q |
279 |
caagtgtgtaagacaagtgcttctcaaaatcaattttggcacatatgacagcatagcgcacttttcaatcactgcatgttgcatcatacatggagaatca |
378 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||||| ||| | | | | || | || | ||| ||| | | |||||||||||| ||||||||| |
|
|
| T |
10373641 |
caagtgtgtaagacaagtgcttctcagaatcaattttggaacagctaataacttaacacattcacgaataactacttcttgcatcatacacggagaatca |
10373740 |
T |
|
| Q |
379 |
ctcccaagaaatgacaattgggtccttcca---tcaagcccatcaatcttaaannnnnnnattgacgacaaccaatgcaaagtgggctctgtttccaata |
475 |
Q |
| |
|
||| |||| ||||||| ||||| ||| || |||||||||| || || | ||||| ||||||||||||| ||| | ||||||||||| |
|
|
| T |
10373741 |
ctctcaagcaatgacagttgggaactttcactctcaagcccattgatattcatttcttttattgaagacaaccaatgcagagtagatggtgtttccaata |
10373840 |
T |
|
| Q |
476 |
gatgagaacaaccttctatttcaatttcttctatgcaaggaag |
518 |
Q |
| |
|
|||||||||||||| |||| |||||||||||||| ||||||| |
|
|
| T |
10373841 |
gatgagaacaacctgatattacaatttcttctatggaaggaag |
10373883 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 465 - 510
Target Start/End: Complemental strand, 10530731 - 10530686
Alignment:
| Q |
465 |
tgtttccaatagatgagaacaaccttctatttcaatttcttctatg |
510 |
Q |
| |
|
||||||||||||| ||| |||||||||||||| ||||||||||||| |
|
|
| T |
10530731 |
tgtttccaatagacgagcacaaccttctatttgaatttcttctatg |
10530686 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 142 - 254
Target Start/End: Original strand, 10967365 - 10967477
Alignment:
| Q |
142 |
acaagtgatgtgtaattgctccacgtttcaggaggtaggaaggataaattctcacaatttacaatttcaagtgattgcaatgaagtgggtagaccacttg |
241 |
Q |
| |
|
|||||||||||||||||||||||| |||| ||||| | ||| | |||||||| ||| | ||| |||||||| | |||||||||||| || ||| | | |
|
|
| T |
10967365 |
acaagtgatgtgtaattgctccacatttccggaggcaagaatgctaaattcttacagtcggaaatatcaagtgacttcaatgaagtgggaagtccattag |
10967464 |
T |
|
| Q |
242 |
atggaaatgcagt |
254 |
Q |
| |
|
||| ||||||||| |
|
|
| T |
10967465 |
atgaaaatgcagt |
10967477 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 142 - 254
Target Start/End: Complemental strand, 13397887 - 13397775
Alignment:
| Q |
142 |
acaagtgatgtgtaattgctccacgtttcaggaggtaggaaggataaattctcacaatttacaatttcaagtgattgcaatgaagtgggtagaccacttg |
241 |
Q |
| |
|
||||||||||||||||||||||| ||||||||| | | ||| | |||||||| ||| | | || |||||| ||||| |||||||| |||||| ||| |
|
|
| T |
13397887 |
acaagtgatgtgtaattgctccatgtttcaggacgcaagaatgctaaattctgacactcatctatacgaagtgactgcaacgaagtgggaagaccatttg |
13397788 |
T |
|
| Q |
242 |
atggaaatgcagt |
254 |
Q |
| |
|
|||||||||||| |
|
|
| T |
13397787 |
ctggaaatgcagt |
13397775 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 142 - 237
Target Start/End: Complemental strand, 13163387 - 13163292
Alignment:
| Q |
142 |
acaagtgatgtgtaattgctccacgtttcaggaggtaggaaggataaattctcacaatttacaatttcaagtgattgcaatgaagtgggtagacca |
237 |
Q |
| |
|
||||| ||||||||||||| ||| |||||| | || ||||| | ||||||| ||||| ||||| |||||| ||||||||||||||||||||| |
|
|
| T |
13163387 |
acaagagatgtgtaattgccccatgtttcaagtggcaggaatgctaaattcggacaatcatcaattctaagtgactgcaatgaagtgggtagacca |
13163292 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 438 - 532
Target Start/End: Complemental strand, 10186491 - 10186397
Alignment:
| Q |
438 |
tgacgacaaccaatgcaaagtgggctctgtttccaatagatgagaacaaccttctatttcaatttcttctatgcaaggaagatgactaggcaaat |
532 |
Q |
| |
|
||||| |||||||| |||||| || ||| |||||||||| | |||||||| ||| ||||||||||||||||||||| | ||||||||||| |
|
|
| T |
10186491 |
tgacggcaaccaatccaaagtaggtggtgtatccaatagattcgcacaaccttttatcataatttcttctatgcaaggaaggtcactaggcaaat |
10186397 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 465 - 510
Target Start/End: Complemental strand, 10679522 - 10679477
Alignment:
| Q |
465 |
tgtttccaatagatgagaacaaccttctatttcaatttcttctatg |
510 |
Q |
| |
|
||||||||||||| ||| | |||||||||||| ||||||||||||| |
|
|
| T |
10679522 |
tgtttccaatagacgagcataaccttctatttgaatttcttctatg |
10679477 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 148 - 200
Target Start/End: Complemental strand, 8863690 - 8863638
Alignment:
| Q |
148 |
gatgtgtaattgctccacgtttcaggaggtaggaaggataaattctcacaatt |
200 |
Q |
| |
|
||||||||||||||||||||||| ||||| | ||| |||| ||||||||||| |
|
|
| T |
8863690 |
gatgtgtaattgctccacgtttctggaggcatgaatgatagcttctcacaatt |
8863638 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 438 - 518
Target Start/End: Complemental strand, 10079521 - 10079441
Alignment:
| Q |
438 |
tgacgacaaccaatgcaaagtgggctctgtttccaatagatgagaacaaccttctatttcaatttcttctatgcaaggaag |
518 |
Q |
| |
|
||||| |||||||| |||||| || |||||||||||||| | |||||||| ||| ||||||||||||||||||||| |
|
|
| T |
10079521 |
tgacggcaaccaatccaaagtaggtggtgtttccaatagattcgcacaaccttttatcataatttcttctatgcaaggaag |
10079441 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0083 (Bit Score: 134; Significance: 2e-69; HSPs: 1)
Name: scaffold0083
Description:
Target: scaffold0083; HSP #1
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 61 - 518
Target Start/End: Original strand, 55183 - 55640
Alignment:
| Q |
61 |
atgtaaagtgtttggagcacagggaaaccattaagtgggaaggatgtaagttcatcacagctgctccataactcaagactgacaagtgatgtgtaattgc |
160 |
Q |
| |
|
|||| |||||||||||| |||||||||||| |||||| |||||||||||| |||||| || ||| | |||||||||||||||||||||||||| |
|
|
| T |
55183 |
atgtcaagtgtttggagggcagggaaaccatcaagtggaaaggatgtaagtgaatcacaactatatgatatattaagactgacaagtgatgtgtaattgc |
55282 |
T |
|
| Q |
161 |
tccacgtttcaggaggtaggaaggataaattctcacaatttacaatttcaagtgattgcaatgaagtgggtagaccacttgatggaaatgcagtnnnnnn |
260 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| ||| |||| | |||||||||||||||||||||||| |||||||| ||||||||||| |
|
|
| T |
55283 |
tccacgtttcaggaggtaggaaggataaattctcacatttttcaatatgaagtgattgcaatgaagtgggtagtccacttgagggaaatgcagtgagaga |
55382 |
T |
|
| Q |
261 |
nnnnnnnnnnnnnnntctcaagtgtgtaagacaagtgcttctcaaaatcaattttggcacatatgacagcatagcgcacttttcaatcactgcatgttgc |
360 |
Q |
| |
|
| ||||||||||||||||||||||| ||| |||||||||||||||| | | ||| ||| || || | |||| || |||||||| |
|
|
| T |
55383 |
agaaagtgaatggagtttcaagtgtgtaagacaagtgcttttcagaatcaattttggcacagctaatagcttagaacagttgtgaatcgctacatgttgc |
55482 |
T |
|
| Q |
361 |
atcatacatggagaatcactcccaagaaatgacaattgggtccttccatcaagcccatcaatcttaaannnnnnnattgacgacaaccaatgcaaagtgg |
460 |
Q |
| |
|
|||||||| |||||||||||| |||| ||||||||||||| ||| || ||||||||| || || | ||||| ||||||||||||| ||| | |
|
|
| T |
55483 |
atcatacacggagaatcactctcaagcaatgacaattgggaactttcaccaagcccattgatattcattatttttattgaagacaaccaatgcagagtag |
55582 |
T |
|
| Q |
461 |
gctctgtttccaatagatgagaacaaccttctatttcaatttcttctatgcaaggaag |
518 |
Q |
| |
|
||||||||||||||||||||||||| |||| |||||||||||||| ||||||| |
|
|
| T |
55583 |
atggtgtttccaatagatgagaacaacctgatattacaatttcttctatggaaggaag |
55640 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 88; Significance: 5e-42; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 20 - 531
Target Start/End: Complemental strand, 26909417 - 26908906
Alignment:
| Q |
20 |
tttctgtaatataaatggaatccagacttctgcaatcataaatgtaaagtgtttggagcacagggaaaccattaagtgggaaggatgtaagttcatcaca |
119 |
Q |
| |
|
|||||| ||||||||||||||||| ||| || ||||| ||||| | ||| ||||||| |||||||||||| ||| || || ||| |||| ||||||| |
|
|
| T |
26909417 |
tttctgaaatataaatggaatccacactcctacaatcgtaaattttaagactttggagagcagggaaaccatcaagcggaaatgattcaagtgcatcaca |
26909318 |
T |
|
| Q |
120 |
gctgctccataactcaagactgacaagtgatgtgtaattgctccacgtttcaggaggtaggaaggataaattctcacaatttacaatttcaagtgattgc |
219 |
Q |
| |
|
||| ||||||||| | ||||||||||||||||||||||| |||||| |||||||||||||||||||| |||| | ||||||||| ||||||| |
|
|
| T |
26909317 |
gctatgatataactcaatgttcacaagtgatgtgtaattgctccaggtttcaagaggtaggaaggataaattcaaacaaaattcaatttcaattgattgc |
26909218 |
T |
|
| Q |
220 |
aatgaagtgggtagaccacttgatggaaatgcagtnnnnnnnnnnnnnnnnnnnnntctcaagtgtgtaagacaagtgcttctcaaaatcaattttggca |
319 |
Q |
| |
|
||||||||||||||||||||||| || ||||| | | |||||||| |||||| |||||||||| |||||||||||||| |
|
|
| T |
26909217 |
aatgaagtgggtagaccacttgagggtaatgcggcgatagatgaaagagaatagagtttcaagtgttgaagacatgtgcttctcagaatcaattttggca |
26909118 |
T |
|
| Q |
320 |
catatgacagcatagcgcacttttcaatcactgcatgttgcatcatacatggagaatcactcccaagaaatgacaattgggtccttccatcaagcccatc |
419 |
Q |
| |
|
| | | ||| | | || |||| ||||||| ||| |||||||||||| |||||||||||| ||| ||||||||| ||||||| | ||||||||| |
|
|
| T |
26909117 |
aacctaatagcccaacacaattttgaatcactacatcttgcatcatacagggagaatcactcttaagcaatgacaatatggtccttttaccaagcccatg |
26909018 |
T |
|
| Q |
420 |
aatcttaaannnnnnnattgacgacaaccaatgcaaagtgggctctgtttccaatagatgagaacaaccttctatttcaatttcttctatgcaaggaaga |
519 |
Q |
| |
|
|| |||| || ||||||| |||||| ||||| | |||||||||||||||| | ||||||| |||| |||||||||||||||||||||| |
|
|
| T |
26909017 |
gatattaattttcggtatggacgacacccaatgtaaagtagatggtgtttccaatagatgatagcaaccttttattacaatttcttctatgcaaggaagg |
26908918 |
T |
|
| Q |
520 |
tgactaggcaaa |
531 |
Q |
| |
|
| ||||||||| |
|
|
| T |
26908917 |
ttgctaggcaaa |
26908906 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 70; Significance: 3e-31; HSPs: 4)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 27 - 236
Target Start/End: Complemental strand, 11487551 - 11487342
Alignment:
| Q |
27 |
aatataaatggaatccagacttctgcaatcataaatgtaaagtgtttggagcacagggaaaccattaagtgggaaggatgtaagttcatcacagctgctc |
126 |
Q |
| |
|
|||| ||||||||||||||| || |||||||| | | ||| |||||||| |||||||||||| |||||| |||||||||||| |||||||||| || |
|
|
| T |
11487551 |
aataaaaatggaatccagacacctacaatcatatagttttagtctttggagcgcagggaaaccatcaagtggaaaggatgtaagtgcatcacagctacta |
11487452 |
T |
|
| Q |
127 |
cataactcaagactgacaagtgatgtgtaattgctccacgtttcaggaggtaggaaggataaattctcacaatttacaatttcaagtgattgcaatgaag |
226 |
Q |
| |
|
|||||||||| ||||| || ||||||||||||||||||||||||| ||||| ||||||||||||||| | || ||||||||||||||||| |
|
|
| T |
11487451 |
aataactcaagcgacacaagagacttgtaattgctccacgtttcaggaggaaggaatgataaattctcacaactatgaacacaaagtgattgcaatgaag |
11487352 |
T |
|
| Q |
227 |
tgggtagacc |
236 |
Q |
| |
|
| |||||||| |
|
|
| T |
11487351 |
taggtagacc |
11487342 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 32 - 122
Target Start/End: Original strand, 44955211 - 44955301
Alignment:
| Q |
32 |
aaatggaatccagacttctgcaatcataaatgtaaagtgtttggagcacagggaaaccattaagtgggaaggatgtaagttcatcacagct |
122 |
Q |
| |
|
|||| ||||||||||| || ||| || ||||| |||| ||||||||||||||||||||| ||||||||| ||| ||||| |||||||||| |
|
|
| T |
44955211 |
aaattgaatccagactcctacaaccactaatgttaagtctttggagcacagggaaaccatcaagtgggaatgatttaagtgcatcacagct |
44955301 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 465 - 530
Target Start/End: Original strand, 44955662 - 44955727
Alignment:
| Q |
465 |
tgtttccaatagatgagaacaaccttctatttcaatttcttctatgcaaggaagatgactaggcaa |
530 |
Q |
| |
|
||||||||||||||||| |||| ||| ||||||||||||||||||| ||| ||||||||| ||||| |
|
|
| T |
44955662 |
tgtttccaatagatgagcacaatcttttatttcaatttcttctatggaagaaagatgacttggcaa |
44955727 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 306 - 411
Target Start/End: Complemental strand, 11487272 - 11487167
Alignment:
| Q |
306 |
aatcaattttggcacatatgacagcatagcgcacttttcaatcactgcatgttgcatcatacatggagaatcactcccaagaaatgacaattgggtcctt |
405 |
Q |
| |
|
|||||||||||||||| |||||| | | | |||||||||||| || ||| ||| ||||||| ||||| ||||||||||| || |||| || |||| || |
|
|
| T |
11487272 |
aatcaattttggcacagatgacaacgtgacacacttttcaatcgctatatgctgcctcatacacggagagtcactcccaagtaaagacagttcggtcatt |
11487173 |
T |
|
| Q |
406 |
ccatca |
411 |
Q |
| |
|
|||||| |
|
|
| T |
11487172 |
ccatca |
11487167 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 65; Significance: 3e-28; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 57 - 193
Target Start/End: Original strand, 17850503 - 17850639
Alignment:
| Q |
57 |
ataaatgtaaagtgtttggagcacagggaaaccattaagtgggaaggatgtaagttcatcacagctgctccataactcaagactgacaagtgatgtgtaa |
156 |
Q |
| |
|
|||||||| |||| ||| |||| |||| ||||||| | || ||| || |||||| |||| ||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
17850503 |
ataaatgtgaagtctttcgagcgcaggaaaaccatccaatgagaaagaggtaagtgcatcgcagctgctccataactcaagactcgcaagtgatgtgtaa |
17850602 |
T |
|
| Q |
157 |
ttgctccacgtttcaggaggtaggaaggataaattct |
193 |
Q |
| |
|
||| |||||||||||||||| | |||||||||||||| |
|
|
| T |
17850603 |
ttgttccacgtttcaggaggcatgaaggataaattct |
17850639 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002 (Bit Score: 32; Significance: 0.00000001; HSPs: 2)
Name: scaffold0002
Description:
Target: scaffold0002; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 142 - 237
Target Start/End: Original strand, 143601 - 143696
Alignment:
| Q |
142 |
acaagtgatgtgtaattgctccacgtttcaggaggtaggaaggataaattctcacaatttacaatttcaagtgattgcaatgaagtgggtagacca |
237 |
Q |
| |
|
||||| ||||||||||||| ||| |||||| | || ||||| | ||||||| ||||| ||||| |||||| ||||||||||||||||||||| |
|
|
| T |
143601 |
acaagagatgtgtaattgccccatgtttcaagtggcaggaatgctaaattcggacaatcatcaattctaagtgactgcaatgaagtgggtagacca |
143696 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 142 - 237
Target Start/End: Original strand, 151906 - 152001
Alignment:
| Q |
142 |
acaagtgatgtgtaattgctccacgtttcaggaggtaggaaggataaattctcacaatttacaatttcaagtgattgcaatgaagtgggtagacca |
237 |
Q |
| |
|
||||| ||||||||||||| ||| |||||| | || ||||| | ||||||| ||||| ||||| |||||| ||||||||||||||||||||| |
|
|
| T |
151906 |
acaagagatgtgtaattgccccatgtttcaagtggcaggaatgctaaattcggacaatcatcaattctaagtgactgcaatgaagtgggtagacca |
152001 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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