View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13147_low_9 (Length: 250)

Name: NF13147_low_9
Description: NF13147
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13147_low_9
NF13147_low_9
[»] chr8 (32 HSPs)
chr8 (13-221)||(22958643-22958851)
chr8 (126-250)||(4479296-4479419)
chr8 (143-250)||(43032904-43033011)
chr8 (124-250)||(15884556-15884681)
chr8 (124-250)||(17981425-17981551)
chr8 (127-250)||(14846563-14846685)
chr8 (124-250)||(13085508-13085633)
chr8 (124-250)||(45521153-45521278)
chr8 (141-250)||(8141103-8141212)
chr8 (141-241)||(9860004-9860104)
chr8 (141-250)||(43027306-43027415)
chr8 (166-250)||(2964102-2964186)
chr8 (126-250)||(10927592-10927716)
chr8 (143-246)||(18374013-18374116)
chr8 (124-207)||(38922457-38922540)
chr8 (152-246)||(68102-68196)
chr8 (124-250)||(2467118-2467244)
chr8 (160-246)||(13357960-13358046)
chr8 (124-250)||(24837226-24837352)
chr8 (124-246)||(44893282-44893404)
chr8 (141-217)||(33401832-33401908)
chr8 (143-250)||(34710567-34710674)
chr8 (124-250)||(3418513-3418639)
chr8 (192-250)||(8803106-8803164)
chr8 (124-246)||(11785900-11786021)
chr8 (140-241)||(3567904-3568005)
chr8 (165-250)||(7673657-7673742)
chr8 (165-250)||(8997544-8997629)
chr8 (157-250)||(11298267-11298360)
chr8 (165-241)||(26570949-26571025)
chr8 (124-218)||(1013009-1013103)
chr8 (124-250)||(14666071-14666197)
[»] scaffold0170 (1 HSPs)
scaffold0170 (124-245)||(9828-9949)
[»] chr3 (60 HSPs)
chr3 (124-250)||(30767248-30767374)
chr3 (124-250)||(15320166-15320292)
chr3 (126-250)||(3136695-3136818)
chr3 (141-240)||(49543516-49543615)
chr3 (141-250)||(13893923-13894032)
chr3 (141-250)||(51682955-51683064)
chr3 (124-250)||(7310704-7310830)
chr3 (124-246)||(15795499-15795620)
chr3 (124-250)||(29127899-29128025)
chr3 (124-250)||(54261206-54261332)
chr3 (141-250)||(28572212-28572321)
chr3 (150-250)||(19146967-19147067)
chr3 (124-248)||(26207804-26207928)
chr3 (124-250)||(47471812-47471937)
chr3 (124-250)||(51060282-51060408)
chr3 (141-250)||(3507534-3507643)
chr3 (165-250)||(26361968-26362053)
chr3 (141-250)||(33251659-33251768)
chr3 (126-250)||(7650209-7650333)
chr3 (127-247)||(10040540-10040659)
chr3 (118-250)||(29135887-29136019)
chr3 (124-250)||(6462392-6462518)
chr3 (152-206)||(26590311-26590365)
chr3 (124-246)||(35923628-35923750)
chr3 (124-250)||(48342000-48342126)
chr3 (124-217)||(10855364-10855457)
chr3 (165-250)||(47749106-47749191)
chr3 (142-250)||(31072876-31072984)
chr3 (143-221)||(3763050-3763127)
chr3 (124-250)||(34662320-34662446)
chr3 (124-250)||(45877434-45877560)
chr3 (168-250)||(47219168-47219250)
chr3 (141-250)||(30045818-30045927)
chr3 (181-250)||(49021204-49021273)
chr3 (153-250)||(54237457-54237554)
chr3 (142-250)||(22909782-22909889)
chr3 (126-202)||(46529919-46529995)
chr3 (165-240)||(41630523-41630598)
chr3 (183-246)||(50753346-50753409)
chr3 (124-250)||(25294940-25295066)
chr3 (124-250)||(29762156-29762282)
chr3 (124-250)||(35315936-35316062)
chr3 (124-238)||(52364813-52364927)
chr3 (164-246)||(55069684-55069766)
chr3 (141-250)||(2029268-2029377)
chr3 (141-250)||(26923262-26923371)
chr3 (141-249)||(8362574-8362682)
chr3 (192-240)||(19873420-19873468)
chr3 (141-221)||(49198348-49198428)
chr3 (165-216)||(13367445-13367496)
chr3 (143-246)||(22405548-22405651)
chr3 (195-250)||(36043675-36043730)
chr3 (166-217)||(39849093-39849144)
chr3 (129-240)||(45402362-45402473)
chr3 (124-198)||(11687162-11687236)
chr3 (168-246)||(50405608-50405686)
chr3 (181-234)||(43330749-43330802)
chr3 (166-219)||(47303521-47303574)
chr3 (187-239)||(24146340-24146392)
chr3 (182-250)||(37319890-37319958)
[»] chr6 (31 HSPs)
chr6 (141-250)||(3601085-3601194)
chr6 (141-233)||(19230576-19230667)
chr6 (124-250)||(6606097-6606223)
chr6 (144-250)||(29444765-29444871)
chr6 (124-250)||(5253223-5253349)
chr6 (124-250)||(29333139-29333264)
chr6 (124-250)||(34954619-34954745)
chr6 (141-250)||(12606431-12606540)
chr6 (167-250)||(9633625-9633708)
chr6 (141-250)||(13036004-13036113)
chr6 (124-250)||(21898632-21898758)
chr6 (165-250)||(19089523-19089608)
chr6 (166-250)||(30788853-30788937)
chr6 (141-246)||(2271307-2271410)
chr6 (165-250)||(13468958-13469043)
chr6 (142-222)||(13391289-13391368)
chr6 (182-250)||(14783420-14783488)
chr6 (124-195)||(32048435-32048506)
chr6 (152-250)||(5029829-5029927)
chr6 (124-250)||(8611974-8612100)
chr6 (124-214)||(9366459-9366549)
chr6 (188-250)||(8149797-8149859)
chr6 (124-250)||(8932645-8932771)
chr6 (124-250)||(8944111-8944237)
chr6 (187-241)||(33940058-33940112)
chr6 (181-250)||(8938752-8938821)
chr6 (141-250)||(14107358-14107467)
chr6 (124-239)||(9179747-9179862)
chr6 (168-250)||(12635842-12635924)
chr6 (142-220)||(24671896-24671974)
chr6 (126-250)||(31129163-31129287)
[»] chr7 (40 HSPs)
chr7 (152-246)||(23658190-23658284)
chr7 (124-250)||(38578867-38578993)
chr7 (124-250)||(22973950-22974076)
chr7 (141-250)||(17748382-17748491)
chr7 (124-250)||(10047876-10048002)
chr7 (124-250)||(21530731-21530857)
chr7 (124-250)||(27028262-27028388)
chr7 (124-250)||(34659209-34659335)
chr7 (124-250)||(37514904-37515030)
chr7 (124-250)||(43346779-43346905)
chr7 (124-250)||(48804666-48804792)
chr7 (124-217)||(16802106-16802199)
chr7 (165-250)||(39474964-39475049)
chr7 (118-250)||(5069815-5069947)
chr7 (155-250)||(41945488-41945582)
chr7 (124-250)||(22993367-22993493)
chr7 (124-250)||(43861972-43862098)
chr7 (124-249)||(18785652-18785777)
chr7 (141-250)||(36619254-36619363)
chr7 (126-246)||(13095843-13095963)
chr7 (124-246)||(1797443-1797565)
chr7 (124-250)||(47341859-47341985)
chr7 (165-250)||(8734686-8734771)
chr7 (141-250)||(27875088-27875197)
chr7 (165-250)||(28744186-28744271)
chr7 (165-250)||(29805440-29805525)
chr7 (141-250)||(45697190-45697298)
chr7 (124-215)||(43925495-43925586)
chr7 (176-250)||(3353459-3353533)
chr7 (124-250)||(26423288-26423413)
chr7 (141-219)||(30827292-30827370)
chr7 (124-250)||(42210262-42210388)
chr7 (141-250)||(21190780-21190889)
chr7 (133-250)||(29151932-29152049)
chr7 (124-241)||(42032079-42032196)
chr7 (178-250)||(3603394-3603466)
chr7 (141-217)||(14535291-14535367)
chr7 (126-246)||(39420823-39420942)
chr7 (167-250)||(48551883-48551966)
chr7 (141-250)||(4195202-4195311)
[»] chr4 (58 HSPs)
chr4 (124-250)||(2559292-2559418)
chr4 (143-250)||(40780861-40780968)
chr4 (124-250)||(47078443-47078569)
chr4 (141-250)||(16645120-16645229)
chr4 (143-246)||(48317279-48317382)
chr4 (124-250)||(7246646-7246772)
chr4 (124-250)||(36145215-36145341)
chr4 (124-250)||(52950067-52950193)
chr4 (152-241)||(30317246-30317335)
chr4 (142-250)||(38075436-38075544)
chr4 (126-240)||(4736584-4736698)
chr4 (124-250)||(29895772-29895898)
chr4 (124-250)||(38166012-38166138)
chr4 (141-249)||(21429303-21429411)
chr4 (164-247)||(3507295-3507378)
chr4 (124-239)||(49260676-49260791)
chr4 (152-250)||(4738631-4738729)
chr4 (124-250)||(14124001-14124127)
chr4 (124-250)||(53599045-53599171)
chr4 (124-250)||(55921019-55921145)
chr4 (141-250)||(5472848-5472957)
chr4 (142-246)||(3159473-3159577)
chr4 (141-241)||(8889024-8889124)
chr4 (124-250)||(36262767-36262891)
chr4 (167-250)||(48352509-48352592)
chr4 (124-248)||(1940779-1940900)
chr4 (152-250)||(16450313-16450411)
chr4 (124-250)||(20128294-20128420)
chr4 (152-250)||(20421786-20421884)
chr4 (124-250)||(42722577-42722703)
chr4 (124-250)||(43458598-43458724)
chr4 (124-221)||(1446811-1446908)
chr4 (141-250)||(10541018-10541126)
chr4 (141-250)||(33176016-33176125)
chr4 (141-249)||(295534-295641)
chr4 (118-230)||(6779190-6779302)
chr4 (124-250)||(15839935-15840060)
chr4 (124-250)||(43468332-43468458)
chr4 (193-250)||(2686455-2686512)
chr4 (142-239)||(20532420-20532517)
chr4 (165-250)||(47682382-47682467)
chr4 (176-241)||(54946286-54946351)
chr4 (143-239)||(41162893-41162989)
chr4 (188-250)||(6032643-6032705)
chr4 (124-250)||(13073523-13073649)
chr4 (176-250)||(14567276-14567350)
chr4 (148-250)||(14859300-14859402)
chr4 (168-250)||(24166479-24166561)
chr4 (167-241)||(50485971-50486045)
chr4 (165-250)||(17080069-17080154)
chr4 (165-250)||(18531545-18531630)
chr4 (124-241)||(40272340-40272457)
chr4 (167-235)||(8424582-8424650)
chr4 (141-185)||(13436814-13436858)
chr4 (168-236)||(23788426-23788494)
chr4 (143-239)||(29588740-29588836)
chr4 (166-250)||(38168284-38168367)
chr4 (142-246)||(54524935-54525038)
[»] chr1 (56 HSPs)
chr1 (141-246)||(40288482-40288587)
chr1 (124-246)||(30927732-30927854)
chr1 (118-250)||(18915842-18915974)
chr1 (124-250)||(8763972-8764098)
chr1 (141-250)||(26325810-26325919)
chr1 (141-250)||(41663857-41663966)
chr1 (152-248)||(17092480-17092576)
chr1 (143-250)||(17642005-17642112)
chr1 (124-250)||(37339800-37339927)
chr1 (124-250)||(16956447-16956573)
chr1 (124-230)||(31152697-31152803)
chr1 (140-250)||(32142847-32142957)
chr1 (124-250)||(33004016-33004142)
chr1 (141-250)||(2980932-2981041)
chr1 (141-242)||(14254277-14254378)
chr1 (142-243)||(33418123-33418224)
chr1 (142-250)||(2567275-2567383)
chr1 (143-239)||(48761176-48761272)
chr1 (176-250)||(4581683-4581757)
chr1 (124-250)||(10172972-10173098)
chr1 (141-246)||(35908755-35908859)
chr1 (124-250)||(43959822-43959948)
chr1 (124-250)||(45361883-45362009)
chr1 (141-250)||(10422786-10422895)
chr1 (141-250)||(26660136-26660244)
chr1 (124-221)||(31734270-31734366)
chr1 (166-242)||(10507721-10507797)
chr1 (167-250)||(44969688-44969771)
chr1 (127-221)||(33498869-33498963)
chr1 (152-250)||(50371835-50371933)
chr1 (141-250)||(5855520-5855629)
chr1 (141-250)||(9659180-9659288)
chr1 (124-217)||(12744557-12744650)
chr1 (124-217)||(12755547-12755640)
chr1 (124-221)||(13262064-13262161)
chr1 (124-241)||(15465946-15466063)
chr1 (141-250)||(49078112-49078221)
chr1 (141-250)||(50503362-50503471)
chr1 (126-250)||(16263528-16263652)
chr1 (168-224)||(38791637-38791693)
chr1 (124-219)||(32852-32947)
chr1 (142-221)||(10336515-10336594)
chr1 (187-250)||(35211173-35211236)
chr1 (124-250)||(11397890-11398015)
chr1 (165-250)||(12036744-12036830)
chr1 (124-250)||(18649353-18649479)
chr1 (152-250)||(32150923-32151021)
chr1 (124-250)||(34719757-34719883)
chr1 (143-250)||(17389772-17389878)
chr1 (151-198)||(40226295-40226342)
chr1 (188-250)||(5504076-5504138)
chr1 (143-204)||(28416946-28417007)
chr1 (141-250)||(34697333-34697442)
chr1 (171-216)||(50952261-50952306)
chr1 (165-217)||(21849239-21849291)
chr1 (133-241)||(25165391-25165498)
[»] chr5 (61 HSPs)
chr5 (124-250)||(42086308-42086434)
chr5 (124-250)||(4016255-4016381)
chr5 (141-250)||(38897719-38897827)
chr5 (142-250)||(9805003-9805111)
chr5 (124-250)||(7866562-7866688)
chr5 (141-239)||(12081906-12082004)
chr5 (142-246)||(18136280-18136388)
chr5 (124-250)||(8513500-8513626)
chr5 (141-250)||(1538429-1538538)
chr5 (124-221)||(14152031-14152128)
chr5 (141-250)||(23383655-23383764)
chr5 (143-250)||(14728082-14728190)
chr5 (127-250)||(37263225-37263347)
chr5 (124-250)||(5731920-5732046)
chr5 (124-250)||(9812853-9812979)
chr5 (124-250)||(12766112-12766238)
chr5 (124-250)||(13664241-13664367)
chr5 (124-250)||(19572705-19572831)
chr5 (124-250)||(23247352-23247477)
chr5 (124-250)||(30349560-30349686)
chr5 (124-241)||(15034056-15034173)
chr5 (141-250)||(18262618-18262727)
chr5 (165-242)||(18294492-18294569)
chr5 (141-250)||(40117413-40117522)
chr5 (157-250)||(43399142-43399235)
chr5 (126-250)||(14588617-14588741)
chr5 (142-250)||(42291505-42291613)
chr5 (155-250)||(20682617-20682712)
chr5 (124-250)||(12704995-12705121)
chr5 (124-250)||(25417183-25417309)
chr5 (162-216)||(35006769-35006823)
chr5 (151-221)||(35638062-35638132)
chr5 (124-217)||(39728368-39728461)
chr5 (126-250)||(20525821-20525945)
chr5 (139-250)||(5079327-5079437)
chr5 (124-231)||(30995102-30995209)
chr5 (187-250)||(40773317-40773380)
chr5 (124-250)||(11845801-11845927)
chr5 (143-205)||(19839327-19839389)
chr5 (164-250)||(21375372-21375458)
chr5 (152-246)||(24463890-24463984)
chr5 (124-250)||(41163460-41163585)
chr5 (141-239)||(41800975-41801073)
chr5 (141-198)||(20705561-20705618)
chr5 (141-206)||(25467408-25467473)
chr5 (165-246)||(39099783-39099864)
chr5 (124-192)||(1898982-1899050)
chr5 (167-246)||(3653918-3653997)
chr5 (167-250)||(24875369-24875452)
chr5 (187-250)||(27648425-27648488)
chr5 (182-240)||(6764467-6764525)
chr5 (154-240)||(32874798-32874884)
chr5 (176-250)||(42861218-42861292)
chr5 (124-217)||(7308397-7308490)
chr5 (166-235)||(9168268-9168337)
chr5 (181-250)||(20255407-20255476)
chr5 (156-217)||(25452939-25452999)
chr5 (141-205)||(21149732-21149796)
chr5 (152-250)||(21487626-21487721)
chr5 (171-239)||(24499010-24499078)
chr5 (124-208)||(28857109-28857193)
[»] chr2 (56 HSPs)
chr2 (124-250)||(25540404-25540530)
chr2 (124-250)||(44139464-44139590)
chr2 (124-250)||(41031906-41032031)
chr2 (124-250)||(41220615-41220741)
chr2 (141-250)||(12864221-12864330)
chr2 (124-241)||(39201517-39201634)
chr2 (143-250)||(10026616-10026723)
chr2 (124-250)||(9360748-9360874)
chr2 (124-250)||(10823040-10823166)
chr2 (124-250)||(37560153-37560279)
chr2 (141-250)||(38962760-38962869)
chr2 (124-250)||(2528341-2528467)
chr2 (124-250)||(7747254-7747380)
chr2 (124-250)||(11069858-11069984)
chr2 (124-250)||(38005382-38005508)
chr2 (141-235)||(45263682-45263776)
chr2 (141-250)||(6358151-6358260)
chr2 (141-250)||(12455307-12455416)
chr2 (141-250)||(28616379-28616488)
chr2 (124-249)||(34356186-34356311)
chr2 (165-250)||(35946759-35946844)
chr2 (128-246)||(7787040-7787158)
chr2 (124-250)||(8410111-8410237)
chr2 (152-250)||(16325603-16325701)
chr2 (124-238)||(22593115-22593228)
chr2 (143-217)||(29653626-29653700)
chr2 (124-250)||(34346287-34346413)
chr2 (124-217)||(15079463-15079556)
chr2 (126-250)||(29422197-29422321)
chr2 (141-250)||(20612534-20612645)
chr2 (142-233)||(24179568-24179657)
chr2 (124-250)||(3811691-3811817)
chr2 (124-250)||(16034917-16035043)
chr2 (124-250)||(18902530-18902656)
chr2 (124-250)||(19976807-19976933)
chr2 (165-250)||(16813165-16813250)
chr2 (165-250)||(16852444-16852529)
chr2 (166-250)||(3643887-3643971)
chr2 (142-250)||(10046477-10046584)
chr2 (166-250)||(27725962-27726046)
chr2 (126-250)||(39806885-39807009)
chr2 (166-250)||(44945615-44945699)
chr2 (124-246)||(10669572-10669694)
chr2 (141-250)||(2784930-2785038)
chr2 (141-250)||(14169609-14169718)
chr2 (126-224)||(14853391-14853491)
chr2 (165-250)||(29421303-29421388)
chr2 (166-250)||(20116612-20116696)
chr2 (141-216)||(13026445-13026520)
chr2 (207-250)||(44023358-44023401)
chr2 (141-250)||(18649026-18649135)
chr2 (124-217)||(21180347-21180440)
chr2 (152-240)||(28525465-28525554)
chr2 (141-242)||(33634447-33634548)
chr2 (189-246)||(34738337-34738394)
chr2 (188-224)||(25549772-25549808)
[»] scaffold0086 (1 HSPs)
scaffold0086 (134-250)||(26176-26292)
[»] scaffold0009 (2 HSPs)
scaffold0009 (124-250)||(42832-42958)
scaffold0009 (194-250)||(9495-9551)
[»] scaffold0029 (1 HSPs)
scaffold0029 (141-250)||(41044-41153)
[»] scaffold0316 (1 HSPs)
scaffold0316 (136-250)||(1614-1728)
[»] scaffold0002 (2 HSPs)
scaffold0002 (124-250)||(553-679)
scaffold0002 (124-250)||(319405-319531)
[»] scaffold0291 (1 HSPs)
scaffold0291 (141-250)||(6855-6964)
[»] scaffold0016 (1 HSPs)
scaffold0016 (141-250)||(8701-8810)
[»] scaffold0011 (2 HSPs)
scaffold0011 (142-250)||(224318-224426)
scaffold0011 (176-250)||(186552-186626)
[»] scaffold0376 (1 HSPs)
scaffold0376 (124-250)||(12653-12779)
[»] scaffold0010 (1 HSPs)
scaffold0010 (152-250)||(155711-155809)
[»] scaffold0006 (1 HSPs)
scaffold0006 (124-248)||(68500-68621)
[»] scaffold0384 (1 HSPs)
scaffold0384 (141-241)||(5973-6072)
[»] scaffold0079 (1 HSPs)
scaffold0079 (124-199)||(8158-8232)
[»] scaffold0024 (1 HSPs)
scaffold0024 (152-246)||(149396-149490)
[»] scaffold0005 (1 HSPs)
scaffold0005 (176-250)||(250025-250099)
[»] scaffold0116 (1 HSPs)
scaffold0116 (148-241)||(17397-17490)


Alignment Details
Target: chr8 (Bit Score: 149; Significance: 8e-79; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 13 - 221
Target Start/End: Original strand, 22958643 - 22958851
Alignment:
Q  13 aatataagaaagaaataacgtcacgtgactgcacactttataattttaatttaaacttaattgaatgcatgtttaaaaacattttcttttaactaagctc 112  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| |||||||||||||||||||||||| |     
T  22958643 aatataagaaagaaataacgtcacgtgactgcacactttttaattttaatttaaaattaattgaatgcatgtctaaaaacattttcttttaactaagttg 22958742  T
Q  113 tttgggcttcatccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaatt 212  Q
    ||||||||||||||||||| |||||||||||||| || |||||||||||||||||||||| | |||||||||||||||| |||||  || |||||| |||    
T  22958743 tttgggcttcatccaaggacgtacctgtggaatatcgaattcgattttcagagggaacaatgcttggtcagtgtgcatgtctctatgcatgagccggatt 22958842  T
Q  213 agtcgtcca 221  Q
    |||||||||    
T  22958843 agtcgtcca 22958851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 126 - 250
Target Start/End: Complemental strand, 4479419 - 4479296
Alignment:
Q  126 caaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatcta 225  Q
    |||||| |||||||| |||||||||||||||||  ||| |||||||||| |||| ||||| |||||||||||| || |||| | |||||||||||| ||     
T  4479419 caaggacgtacctgtagaataccggattcgattcccag-gggaacaacgcttggccagtgcgcatgcctctacgcatgagctggattagtcgtccacctt 4479321  T
Q  226 tggtgggtcggaaaccagtgcgaaa 250  Q
    |||||||||||||||| ||||||||    
T  4479320 tggtgggtcggaaaccggtgcgaaa 4479296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 143 - 250
Target Start/End: Original strand, 43032904 - 43033011
Alignment:
Q  143 aataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaacca 242  Q
    |||| |||||||||||  ||| |||||||||| |||| ||||| |||||||||||||||||||||| |||||||| ||| || ||||||||| ||||||     
T  43032904 aatatcggattcgattcccagggggaacaacgcttggccagtgcgcatgcctctacacacgagccggattagtcgcccacctttggtgggtcagaaaccg 43033003  T
Q  243 gtgcgaaa 250  Q
    ||||||||    
T  43033004 gtgcgaaa 43033011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 124 - 250
Target Start/End: Complemental strand, 15884681 - 15884556
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatc 223  Q
    |||||||| ||||||| |||||||||| |||||||  ||| |||||||||  ||||  |||| |||||||||||| ||||||||| |||||||| ||| |    
T  15884681 tccaaggacgtacctggggaataccgggttcgattcccag-gggaacaacacttggcaagtgcgcatgcctctacgcacgagccggattagtcgcccacc 15884583  T
Q  224 tatggtgggtcggaaaccagtgcgaaa 250  Q
    | |||||||||||||||| ||||||||    
T  15884582 tttggtgggtcggaaaccggtgcgaaa 15884556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 124 - 250
Target Start/End: Original strand, 17981425 - 17981551
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatc 223  Q
    |||||||||||||| | | |||||||| |||||||  ||| |||||||||  |||  |||||||||||||||||| |||||| ||||||||| | ||| |    
T  17981425 tccaaggatgtacccgggaaataccgggttcgattcccagggggaacaactcttgaccagtgtgcatgcctctacgcacgagtcgaattagttgcccagc 17981524  T
Q  224 tatggtgggtcggaaaccagtgcgaaa 250  Q
    | ||||| |||||||||| ||||||||    
T  17981525 tttggtgagtcggaaaccggtgcgaaa 17981551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 127 - 250
Target Start/End: Original strand, 14846563 - 14846685
Alignment:
Q  127 aaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctat 226  Q
    ||||| ||||| | |||||||||| ||||||| |||| |||||||| |||||||||||| |||||||||||| || ||| |  || ||||||||| || |    
T  14846563 aaggacgtacccggggaataccgggttcgattctcag-gggaacaatgattggtcagtgcgcatgcctctacgcatgagtcagataagtcgtccaccttt 14846661  T
Q  227 ggtgggtcggaaaccagtgcgaaa 250  Q
    ||||||||||||| | ||||||||    
T  14846662 ggtgggtcggaaatcggtgcgaaa 14846685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 124 - 250
Target Start/End: Original strand, 13085508 - 13085633
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatc 223  Q
    |||||||| ||| | | |||||||||| ||||||| ||||||||||||||| || | |||||||||| ||||||| ||||||||  |||| ||| |||||    
T  13085508 tccaaggacgtatccggggaataccgggttcgattctcagagggaacaacgtttagccagtgtgcatacctctacgcacgagccagattaatcgcccatc 13085607  T
Q  224 tatggtgggtcggaaaccagtgcgaaa 250  Q
     |  |||||||||||||| ||||||||    
T  13085608 -aaagtgggtcggaaaccggtgcgaaa 13085633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 124 - 250
Target Start/End: Original strand, 45521153 - 45521278
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatc 223  Q
    |||||||||||||| | |||||||||| |||||||  ||| |||||||||  ||| |||||| |||||||||||| || |||||| ||||||||  || |    
T  45521153 tccaaggatgtacccggggaataccgggttcgattcccag-gggaacaacacttgatcagtgcgcatgcctctacgcatgagccggattagtcgctcacc 45521251  T
Q  224 tatggtgggtcggaaaccagtgcgaaa 250  Q
    | || ||||||||||||| ||||||||    
T  45521252 tttgatgggtcggaaaccggtgcgaaa 45521278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 141 - 250
Target Start/End: Original strand, 8141103 - 8141212
Alignment:
Q  141 ggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaac 240  Q
    |||||||||| |||||||| ||| || ||||||| |||| ||||| |||||||||||| || |||| ||||||||||||||  | ||||||||| |||||    
T  8141103 ggaataccgggttcgatttccaggggaaacaacgcttggccagtgcgcatgcctctacgcatgagctgaattagtcgtccacatttggtgggtcagaaac 8141202  T
Q  241 cagtgcgaaa 250  Q
    |  |||||||    
T  8141203 cgatgcgaaa 8141212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 141 - 241
Target Start/End: Complemental strand, 9860104 - 9860004
Alignment:
Q  141 ggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaac 240  Q
    |||||||||| |||||||  ||| |||||||||  |||| ||||||||||||||||||||| |||||  |||||||||||| |  |||||| ||||||||    
T  9860104 ggaataccgggttcgattcccagggggaacaacacttggccagtgtgcatgcctctacacatgagccagattagtcgtccaccattggtggatcggaaac 9860005  T
Q  241 c 241  Q
    |    
T  9860004 c 9860004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 141 - 250
Target Start/End: Original strand, 43027306 - 43027415
Alignment:
Q  141 ggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaac 240  Q
    ||||||| || |||||||  |||  |||||||||||||  || || |||||||||||| || |||||| ||||||||||||||| || ||||||||||||    
T  43027306 ggaatactgggttcgattcccaggaggaacaacgattgtccaatgcgcatgcctctacgcatgagccggattagtcgtccatctttgatgggtcggaaac 43027405  T
Q  241 cagtgcgaaa 250  Q
    |  |||||||    
T  43027406 cgatgcgaaa 43027415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 166 - 250
Target Start/End: Original strand, 2964102 - 2964186
Alignment:
Q  166 ggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaaccagtgcgaaa 250  Q
    ||||||||| |||| || ||||||||||||||| ||||| ||| |||||||| ||| || ||||||||| |||||| ||||||||    
T  2964102 ggaacaacgcttggccaatgtgcatgcctctacgcacgaaccggattagtcgcccacctttggtgggtcagaaaccggtgcgaaa 2964186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 126 - 250
Target Start/End: Original strand, 10927592 - 10927716
Alignment:
Q  126 caaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatcta 225  Q
    |||||| ||||| | |||||||||| |||||||   ||  ||||||||| |||| ||||| |||||||||||| || |||||| ||||||||| || ||     
T  10927592 caaggacgtacccggggaataccgggttcgattcctaggaggaacaacgcttggccagtgcgcatgcctctacgcatgagccggattagtcgttcacctt 10927691  T
Q  226 tggtgggtcggaaaccagtgcgaaa 250  Q
    | ||||||||||||||  |||||||    
T  10927692 tagtgggtcggaaaccgatgcgaaa 10927716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 143 - 246
Target Start/End: Original strand, 18374013 - 18374116
Alignment:
Q  143 aataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaacca 242  Q
    |||||| | ||||||| |||| | |||||||| |||  ||||| |||||||||||| || |||||| |||||||||||| || |||||||||| |||||     
T  18374013 aataccaggttcgattctcagggagaacaacgcttgaccagtgcgcatgcctctacgcatgagccggattagtcgtccaactttggtgggtcgaaaaccg 18374112  T
Q  243 gtgc 246  Q
    ||||    
T  18374113 gtgc 18374116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 124 - 207
Target Start/End: Complemental strand, 38922540 - 38922457
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagcc 207  Q
    |||||||| ||||| | |||||||||| |||||||  |||||||||||||| |||| ||||| |||||||| ||| ||||||||    
T  38922540 tccaaggacgtacccggggaataccgggttcgattcccagagggaacaacgcttggccagtgcgcatgcctttacgcacgagcc 38922457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 152 - 246
Target Start/End: Complemental strand, 68196 - 68102
Alignment:
Q  152 ttcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaaccagtgc 246  Q
    ||||||| ||||  ||||||||| |||| |||| ||||||||| ||||||||||||| |||| |||| || || || ||||||||||||| ||||    
T  68196 ttcgattctcaggaggaacaacgtttggccagtatgcatgcctttacacacgagccggattaatcgttcacctttgatgggtcggaaaccggtgc 68102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 124 - 250
Target Start/End: Complemental strand, 2467244 - 2467118
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatc 223  Q
    |||||||| ||| | | |||||||||| |||||||| ||| |||||||||  |||| ||||| ||||| |||||  || |||||| ||||||||||||      
T  2467244 tccaaggacgtatccggggaataccgggttcgatttccagggggaacaactcttggccagtgcgcatgtctctatgcatgagccggattagtcgtccaca 2467145  T
Q  224 tatggtgggtcggaaaccagtgcgaaa 250  Q
      ||||| |||||||||| ||||||||    
T  2467144 attggtgtgtcggaaaccggtgcgaaa 2467118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 160 - 246
Target Start/End: Complemental strand, 13358046 - 13357960
Alignment:
Q  160 tcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaaccagtgc 246  Q
    |||| |||||||||| |||| || ||||||||||||||  ||||||||| |||||||||||  || | |||||||||||||| ||||    
T  13358046 tcagggggaacaacgtttggccaatgtgcatgcctctatgcacgagccggattagtcgtccccctttagtgggtcggaaaccggtgc 13357960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 124 - 250
Target Start/End: Original strand, 24837226 - 24837352
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatc 223  Q
    |||||| | ||||| | |||||||||  |||||||  ||| | |||||||| |||| |||||| ||||||||||  ||||||| | |||||||||||| |    
T  24837226 tccaagtacgtacccggggaataccgtgttcgattcccagggagaacaacgcttggccagtgttcatgcctctaagcacgagcaggattagtcgtccacc 24837325  T
Q  224 tatggtgggtcggaaaccagtgcgaaa 250  Q
    | |||||| ||||||||  ||||||||    
T  24837326 tttggtggatcggaaactggtgcgaaa 24837352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 124 - 246
Target Start/End: Complemental strand, 44893404 - 44893282
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatc 223  Q
    |||||||| ||||| | |||||||||| ||| ||||  || |||||||| | |||| |||||||||||||||||| ||||||||| |||| |||  || |    
T  44893404 tccaaggacgtacccggggaataccgggttcaatttctagggggaacaatgcttggccagtgtgcatgcctctacgcacgagccggattaatcgctcacc 44893305  T
Q  224 tatggtgggtcggaaaccagtgc 246  Q
      || ||||||||||||| ||||    
T  44893304 cttgatgggtcggaaaccggtgc 44893282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 141 - 217
Target Start/End: Complemental strand, 33401908 - 33401832
Alignment:
Q  141 ggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcg 217  Q
    |||||||||| |||||||||||| |||||||||  |||  |||||||||||||||||| || ||| || ||||||||    
T  33401908 ggaataccgggttcgattttcagggggaacaacacttgaccagtgtgcatgcctctacgcatgagtcggattagtcg 33401832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 143 - 250
Target Start/End: Complemental strand, 34710674 - 34710567
Alignment:
Q  143 aataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaacca 242  Q
    ||||||||||||||||  ||| || ||||||  ||||  |||| |||||||| ||||||| || || | ||||||||||||  |||||||||| ||||||    
T  34710674 aataccggattcgattcccaggggaaacaacacttggctagtgcgcatgcctttacacacaagtcggactagtcgtccatcattggtgggtcgaaaacca 34710575  T
Q  243 gtgcgaaa 250  Q
    || |||||    
T  34710574 gtccgaaa 34710567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 124 - 250
Target Start/End: Complemental strand, 3418639 - 3418513
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatc 223  Q
    |||||||| ||| ||| |||||| ||| ||||||||| ||  ||||||||  |||| ||||| |||||| ||||| || ||| |  |||||||||||| |    
T  3418639 tccaaggacgtatctggggaatatcgggttcgatttttaggaggaacaacacttggccagtgcgcatgcgtctacgcatgagtcagattagtcgtccacc 3418540  T
Q  224 tatggtgggtcggaaaccagtgcgaaa 250  Q
    | | ||||||| |||||| ||||||||    
T  3418539 tttagtgggtcagaaaccggtgcgaaa 3418513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 192 - 250
Target Start/End: Original strand, 8803106 - 8803164
Alignment:
Q  192 cctctacacacgagccgaattagtcgtccatctatggtgggtcggaaaccagtgcgaaa 250  Q
    ||||||| ||||||||| |||||||| ||||| |||||||||||||||||  |||||||    
T  8803106 cctctacgcacgagccggattagtcgcccatcaatggtgggtcggaaaccgatgcgaaa 8803164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 124 - 246
Target Start/End: Original strand, 11785900 - 11786021
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatc 223  Q
    |||||||| ||||| | ||||||||||||||||||   || |||| ||||| |||| |||||||||||||||||| || |||||  |||| |||  ||||    
T  11785900 tccaaggacgtacccggggaataccggattcgattccaag-gggagcaacgtttgggcagtgtgcatgcctctacgcatgagccagattaatcgctcatc 11785998  T
Q  224 tatggtgggtcggaaaccagtgc 246  Q
    | || ||| ||||||||| ||||    
T  11785999 tttgatggatcggaaaccggtgc 11786021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 140 - 241
Target Start/End: Original strand, 3567904 - 3568005
Alignment:
Q  140 tggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaa 239  Q
    ||||||||||||||||| | | || |||||||||  |||  |||||  ||| ||||||| || ||||| |||||||| |||| || ||||||||||||||    
T  3567904 tggaataccggattcgaatctaagggggaacaacacttgaccagtgcacatacctctacgcatgagccaaattagtcatccacctttggtgggtcggaaa 3568003  T
Q  240 cc 241  Q
    ||    
T  3568004 cc 3568005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 165 - 250
Target Start/End: Complemental strand, 7673742 - 7673657
Alignment:
Q  165 gggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaaccagtgcgaaa 250  Q
    |||||||||| ||||  ||||||||||||||||| ||||||||| |||  ||| |||||| | |||| ||| ||||| ||||||||    
T  7673742 gggaacaacgtttggctagtgtgcatgcctctacgcacgagccggatttttcgcccatctttagtggatcgaaaaccggtgcgaaa 7673657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 165 - 250
Target Start/End: Complemental strand, 8997629 - 8997544
Alignment:
Q  165 gggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaaccagtgcgaaa 250  Q
    |||||||||| || | ||||  |||||||| ||| || |||||  ||||||||| ||||| |||||||||||||||| ||||||||    
T  8997629 gggaacaacgtttcgccagttcgcatgcctatacgcatgagccagattagtcgttcatctttggtgggtcggaaaccggtgcgaaa 8997544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 157 - 250
Target Start/End: Complemental strand, 11298360 - 11298267
Alignment:
Q  157 ttttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaaccagtgcgaaa 250  Q
    |||||||||||||||||  || | ||||| |||||||||||  || ||||| ||||| |||  || || |||||||||||||||| ||||||||    
T  11298360 ttttcagagggaacaacacttagccagtgcgcatgcctctatgcatgagccaaattaatcgctcacctttggtgggtcggaaaccggtgcgaaa 11298267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 165 - 241
Target Start/End: Original strand, 26570949 - 26571025
Alignment:
Q  165 gggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaacc 241  Q
    |||||||||| |||| ||||||| |||| ||||| || |||||| |||||||||||| || || || ||||||||||    
T  26570949 gggaacaacgcttggccagtgtgtatgcatctacgcatgagccggattagtcgtccacctttgatgagtcggaaacc 26571025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 218
Target Start/End: Complemental strand, 1013103 - 1013009
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgt 218  Q
    |||||||| ||| | | |||||||||| |||||||  ||| |||||||||| |||| ||||   ||||||||||| || ||||||||||| ||||    
T  1013103 tccaaggacgtatccggggaataccgggttcgattcccagggggaacaacgcttggccagtacacatgcctctacgcatgagccgaattaatcgt 1013009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 250
Target Start/End: Complemental strand, 14666197 - 14666071
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatc 223  Q
    |||||||| ||| | | |||||||||| |||||||  ||| || ||||||  |||| ||||| |||||||||||| ||| ||||  |||||||| |||      
T  14666197 tccaaggacgtatccggggaataccgggttcgattcccaggggaaacaacacttggccagtgcgcatgcctctacgcacaagccagattagtcgcccaca 14666098  T
Q  224 tatggtgggtcggaaaccagtgcgaaa 250  Q
      |||||||||| ||||| ||||||||    
T  14666097 gttggtgggtcgaaaaccggtgcgaaa 14666071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170 (Bit Score: 74; Significance: 5e-34; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 124 - 245
Target Start/End: Original strand, 9828 - 9949
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatc 223  Q
    |||||||||||| ||| ||||||||||||||||||| ||| |||||||||| |||| ||||| |||||||||||| ||||||||| |||||||||||| |    
T  9828 tccaaggatgtatctgaggaataccggattcgatttccagggggaacaacgcttggccagtgcgcatgcctctacgcacgagccggattagtcgtccacc 9927  T
Q  224 tatggtgggtcggaaaccagtg 245  Q
    | ||||||||| ||||||||||    
T  9928 tttggtgggtcagaaaccagtg 9949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 71; Significance: 3e-32; HSPs: 60)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 124 - 250
Target Start/End: Complemental strand, 30767374 - 30767248
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatc 223  Q
    |||||||||||||||| |||||| ||| |||||||| ||| |||||||||  |||| |||||||||||||||||| ||||||||| |||||||| ||| |    
T  30767374 tccaaggatgtacctggggaatatcgggttcgatttccagggggaacaacacttggccagtgtgcatgcctctacgcacgagccggattagtcgcccacc 30767275  T
Q  224 tatggtgggtcggaaaccagtgcgaaa 250  Q
    | ||||||||||||||| |||||||||    
T  30767274 tttggtgggtcggaaactagtgcgaaa 30767248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 124 - 250
Target Start/End: Original strand, 15320166 - 15320292
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatc 223  Q
    |||||||| ||||| | |||||||||| ||||||||  ||  ||||||| |||||| |||||||||||||||||| ||||||||| |||||||| ||| |    
T  15320166 tccaaggacgtacccggggaataccgggttcgatttcgaggaggaacaatgattggccagtgtgcatgcctctacgcacgagccggattagtcgcccacc 15320265  T
Q  224 tatggtgggtcggaaaccagtgcgaaa 250  Q
    | ||||||||| |||||| ||||||||    
T  15320266 tttggtgggtcagaaaccggtgcgaaa 15320292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 126 - 250
Target Start/End: Complemental strand, 3136818 - 3136695
Alignment:
Q  126 caaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatcta 225  Q
    |||||| ||||| | ||||||||||||||||||||||| |||||||||  |||| ||||| |||||||||||| || ||| || |||||||||||| ||     
T  3136818 caaggacgtacccggggaataccggattcgattttcag-gggaacaacacttgggcagtgcgcatgcctctacgcatgagtcggattagtcgtccacctt 3136720  T
Q  226 tggtgggtcggaaaccagtgcgaaa 250  Q
    |||| ||||||||||| ||||||||    
T  3136719 tggttggtcggaaaccggtgcgaaa 3136695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 141 - 240
Target Start/End: Original strand, 49543516 - 49543615
Alignment:
Q  141 ggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaac 240  Q
    |||||| ||| ||||||| |||  |||||||||| ||||||||||||||||||||||| |||||||||||||||||| ||| || | |||||||||||||    
T  49543516 ggaatatcgggttcgattctcatggggaacaacgtttggtcagtgtgcatgcctctacgcacgagccgaattagtcgcccacctttagtgggtcggaaac 49543615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 141 - 250
Target Start/End: Original strand, 13893923 - 13894032
Alignment:
Q  141 ggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaac 240  Q
    |||||||||| || ||||| ||| |||||||||| ||||||| || |||||||||||||||||||||| |||||||| ||| || |||||| ||| ||||    
T  13893923 ggaataccgggttggatttccagggggaacaacgcttggtcaatgcgcatgcctctacacacgagccggattagtcgcccacctttggtggatcgaaaac 13894022  T
Q  241 cagtgcgaaa 250  Q
    | ||||||||    
T  13894023 cggtgcgaaa 13894032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 141 - 250
Target Start/End: Complemental strand, 51683064 - 51682955
Alignment:
Q  141 ggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaac 240  Q
    |||||||| | |||||||  ||| |||||||||| |||  ||||| |||||||||| ||||||||||| |||||||| ||| | ||||||||||||||||    
T  51683064 ggaataccaggttcgattcccagggggaacaacgcttgaccagtgcgcatgcctctccacacgagccggattagtcgcccaccaatggtgggtcggaaac 51682965  T
Q  241 cagtgcgaaa 250  Q
    ||||||||||    
T  51682964 cagtgcgaaa 51682955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 124 - 250
Target Start/End: Complemental strand, 7310830 - 7310704
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatc 223  Q
    |||||| | ||||||| |||||||||| |||||||  ||| |||||||||  |||  | |||||||||||||||| ||||||||| ||||||||  ||||    
T  7310830 tccaagaacgtacctgaggaataccgggttcgattcccagtgggaacaacacttgcccggtgtgcatgcctctacgcacgagccggattagtcgctcatc 7310731  T
Q  224 tatggtgggtcggaaaccagtgcgaaa 250  Q
    | ||||||||||||||||  |||||||    
T  7310730 tttggtgggtcggaaaccgatgcgaaa 7310704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 124 - 246
Target Start/End: Complemental strand, 15795620 - 15795499
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatc 223  Q
    |||||||| ||||| | |||||||||  |||||||  ||| |||||||||| |||||||||| |||||||||||| ||||||| |||||||||| ||| |    
T  15795620 tccaaggacgtacccggggaataccgagttcgattcccag-gggaacaacgcttggtcagtgcgcatgcctctacgcacgagctgaattagtcgcccacc 15795522  T
Q  224 tatggtgggtcggaaaccagtgc 246  Q
     ||||||||||| ||||| ||||    
T  15795521 aatggtgggtcgaaaaccggtgc 15795499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 124 - 250
Target Start/End: Original strand, 29127899 - 29128025
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatc 223  Q
    |||||||| ||| ||| |||||| ||| |||||||| ||| | |||||||  |||||||||| |||||||||||| || |||||| |||||||| ||| |    
T  29127899 tccaaggacgtatctggggaatatcgggttcgatttccagggagaacaacacttggtcagtgcgcatgcctctacgcatgagccggattagtcgcccacc 29127998  T
Q  224 tatggtgggtcggaaaccagtgcgaaa 250  Q
    | ||||||||||||||||  |||||||    
T  29127999 tttggtgggtcggaaaccgatgcgaaa 29128025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 124 - 250
Target Start/End: Original strand, 54261206 - 54261332
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatc 223  Q
    |||||||| ||||||| |||||||||| |||||||   ||  ||||||||| |||| ||||| |||||||||||| || |||||| ||||||||| || |    
T  54261206 tccaaggacgtacctggggaataccgggttcgattcctaggaggaacaacgcttggccagtgcgcatgcctctacgcatgagccggattagtcgttcacc 54261305  T
Q  224 tatggtgggtcggaaaccagtgcgaaa 250  Q
    | | |||||||||||||| ||||||||    
T  54261306 tttagtgggtcggaaaccggtgcgaaa 54261332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 141 - 250
Target Start/End: Complemental strand, 28572321 - 28572212
Alignment:
Q  141 ggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaac 240  Q
    ||||||| || |||||||  ||| || ||||||| |||| |||| ||||||||||||| ||||||||| |||||||| ||| || |||||||||||||||    
T  28572321 ggaatactgggttcgattcccaggggaaacaacgcttggccagtatgcatgcctctacgcacgagccggattagtcgcccacctttggtgggtcggaaac 28572222  T
Q  241 cagtgcgaaa 250  Q
    | ||||||||    
T  28572221 cggtgcgaaa 28572212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 150 - 250
Target Start/End: Original strand, 19146967 - 19147067
Alignment:
Q  150 gattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaaccagtgcgaa 249  Q
    ||||||||||||||  ||||||||| |||| ||||||| || ||||||  ||||||| | |||||||||||| || |||||||||||||||| |||||||    
T  19146967 gattcgattttcaggaggaacaacgcttggccagtgtgtatccctctatgcacgagctggattagtcgtccacctttggtgggtcggaaaccggtgcgaa 19147066  T
Q  250 a 250  Q
    |    
T  19147067 a 19147067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 124 - 248
Target Start/End: Complemental strand, 26207928 - 26207804
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatc 223  Q
    |||||||||||||| | |||||||||| |||||||  ||  |||||||||| |||  |||||||||||||||||| || |||||| |||||||| ||||     
T  26207928 tccaaggatgtacccggggaataccgggttcgattcccacggggaacaacgcttgtccagtgtgcatgcctctacgcatgagccggattagtcggccatt 26207829  T
Q  224 tatggtgggtcggaaaccagtgcga 248  Q
      | |||||||||||||| ||||||    
T  26207828 attagtgggtcggaaaccggtgcga 26207804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 124 - 250
Target Start/End: Original strand, 47471812 - 47471937
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatc 223  Q
    |||||||| ||||||  |||||||||| |||||||  ||| |||||||| | ||||  |||| |||||| ||||| || ||||||||||||||||||| |    
T  47471812 tccaaggacgtacctagggaataccgggttcgattcccag-gggaacaatgcttggctagtgcgcatgcttctacgcatgagccgaattagtcgtccacc 47471910  T
Q  224 tatggtgggtcggaaaccagtgcgaaa 250  Q
    | ||||||||||||||||  |||||||    
T  47471911 tttggtgggtcggaaaccgatgcgaaa 47471937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 124 - 250
Target Start/End: Complemental strand, 51060408 - 51060282
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatc 223  Q
    ||||||||| || | | |||||| ||| ||||||| |||| |||||||||  |||||||||| |||||||||||| || || | | |||||||||||| |    
T  51060408 tccaaggatctatccggggaatatcgggttcgattctcagggggaacaacacttggtcagtgcgcatgcctctacgcatgaactggattagtcgtccacc 51060309  T
Q  224 tatggtgggtcggaaaccagtgcgaaa 250  Q
      |||||||||||||||| ||||||||    
T  51060308 attggtgggtcggaaaccggtgcgaaa 51060282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 141 - 250
Target Start/End: Complemental strand, 3507643 - 3507534
Alignment:
Q  141 ggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaac 240  Q
    |||||||||| || ||||   ||||||||||||  |||| ||||| |||||||||||| ||||||||| ||||||||  || || |||||||||||||||    
T  3507643 ggaataccgggtttgattcctagagggaacaacacttggccagtgcgcatgcctctacgcacgagccggattagtcgctcacctttggtgggtcggaaac 3507544  T
Q  241 cagtgcgaaa 250  Q
    | ||||||||    
T  3507543 cggtgcgaaa 3507534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 165 - 250
Target Start/End: Complemental strand, 26362053 - 26361968
Alignment:
Q  165 gggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaaccagtgcgaaa 250  Q
    |||||||||| ||||||||||||||||||||||| ||||||||| ||||||||  || || || ||||||||||||| ||| ||||    
T  26362053 gggaacaacgtttggtcagtgtgcatgcctctacgcacgagccggattagtcgcacacctttgatgggtcggaaaccggtgtgaaa 26361968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 141 - 250
Target Start/End: Original strand, 33251659 - 33251768
Alignment:
Q  141 ggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaac 240  Q
    |||||||||| |||||||  | | |||||||||| |||| |||||||||||||||||| || |||||| ||||||||||||  | || ||||||| ||||    
T  33251659 ggaataccgggttcgattcccggtgggaacaacgtttggccagtgtgcatgcctctacgcatgagccggattagtcgtccacatttgatgggtcgaaaac 33251758  T
Q  241 cagtgcgaaa 250  Q
     |||||||||    
T  33251759 gagtgcgaaa 33251768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 126 - 250
Target Start/End: Original strand, 7650209 - 7650333
Alignment:
Q  126 caaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatcta 225  Q
    ||||||||||| |  |||||||||| |||||||| ||| |||||||||  |||| ||||  | ||| |||||| ||||||||| |||||||| ||| ||     
T  7650209 caaggatgtacttagggaataccgggttcgatttccagggggaacaacacttggccagtacgaatgtctctacgcacgagccggattagtcgcccacctt 7650308  T
Q  226 tggtgggtcggaaaccagtgcgaaa 250  Q
    |||||||| ||||||| ||||||||    
T  7650309 tggtgggttggaaaccggtgcgaaa 7650333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 127 - 247
Target Start/End: Original strand, 10040540 - 10040659
Alignment:
Q  127 aaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctat 226  Q
    ||||| ||||| | |||||| ||| ||||||| |||| |||||||||| |||| ||||| |||||||||||| ||||||||| | | |||||||| || |    
T  10040540 aaggacgtacccggggaatatcgggttcgattctcag-gggaacaacgcttggccagtgcgcatgcctctacgcacgagccggaatggtcgtccaccttt 10040638  T
Q  227 ggtgggtcggaaaccagtgcg 247  Q
    ||||||| ||||||| |||||    
T  10040639 ggtgggttggaaaccggtgcg 10040659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 118 - 250
Target Start/End: Original strand, 29135887 - 29136019
Alignment:
Q  118 gcttcatccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcg 217  Q
    ||||| |||||||| ||| | | ||||||||||||||||||  ||| |||||||||  |||| ||||| |||||||||||| || |||||| |||||||     
T  29135887 gcttcttccaaggacgtatccggggaataccggattcgattcccagggggaacaacacttggccagtgcgcatgcctctacgcatgagccggattagtct 29135986  T
Q  218 tccatctatggtgggtcggaaaccagtgcgaaa 250  Q
    |||| |  |||||||| ||||||| || |||||    
T  29135987 tccaccattggtgggttggaaaccggtacgaaa 29136019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 124 - 250
Target Start/End: Original strand, 6462392 - 6462518
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatc 223  Q
    |||||||| ||| ||| |||||||||| |||||||  ||| | |||||||| |||| ||||| |||||||||||| || |||||| |||||||| ||||     
T  6462392 tccaaggacgtatctggggaataccgggttcgattcacagggagaacaacgcttggccagtgcgcatgcctctacgcatgagccggattagtcgaccatt 6462491  T
Q  224 tatggtgggtcggaaaccagtgcgaaa 250  Q
      | |||||| ||||||| ||||||||    
T  6462492 attagtgggttggaaaccggtgcgaaa 6462518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 152 - 206
Target Start/End: Complemental strand, 26590365 - 26590311
Alignment:
Q  152 ttcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagc 206  Q
    ||||||| |||| |||||||||| |||||||||||||||||||||||||||||||    
T  26590365 ttcgattctcagggggaacaacgcttggtcagtgtgcatgcctctacacacgagc 26590311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 124 - 246
Target Start/End: Complemental strand, 35923750 - 35923628
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatc 223  Q
    |||||||| |||||||  ||||||| | |||||||   || |||||||||| |||| ||||| |||||||||||  |||||| |||||||||||||||||    
T  35923750 tccaaggacgtacctggagaataccaggttcgattcatagggggaacaacgtttggccagtgcgcatgcctctaagcacgagtcgaattagtcgtccatc 35923651  T
Q  224 tatggtgggtcggaaaccagtgc 246  Q
    | || ||| ||| ||||| ||||    
T  35923650 tttgatggatcgaaaaccggtgc 35923628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 124 - 250
Target Start/End: Original strand, 48342000 - 48342126
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatc 223  Q
    |||||||| ||||||| |||||||||| ||| |||   || |||||||||| ||||  |||| |||||||||||| || || ||  ||||||||||||||    
T  48342000 tccaaggacgtacctggggaataccgggttctattcctagggggaacaacgcttggctagtgcgcatgcctctacgcatgaaccagattagtcgtccatc 48342099  T
Q  224 tatggtgggtcggaaaccagtgcgaaa 250  Q
    | |||||| ||||||||  ||||||||    
T  48342100 tttggtggatcggaaacaggtgcgaaa 48342126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 124 - 217
Target Start/End: Original strand, 10855364 - 10855457
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcg 217  Q
    ||||||||||||| || | |||||||| || ||||| ||| |||||||||| |||| ||||  |||||||||||| ||||| ||||||||||||    
T  10855364 tccaaggatgtacttgggaaataccgggtttgatttccagggggaacaacgcttggccagtacgcatgcctctacgcacgaaccgaattagtcg 10855457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 165 - 250
Target Start/End: Complemental strand, 47749191 - 47749106
Alignment:
Q  165 gggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaaccagtgcgaaa 250  Q
    |||||||||  |||| ||||| |||||||||||| |||||||||||||||||| ||| || |||| |||||||||||  |||||||    
T  47749191 gggaacaactcttggccagtgcgcatgcctctacgcacgagccgaattagtcgcccacctttggtaggtcggaaaccgatgcgaaa 47749106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 142 - 250
Target Start/End: Original strand, 31072876 - 31072984
Alignment:
Q  142 gaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaacc 241  Q
    ||||||| | |||||||| ||| |||||||||| ||||||||||  ||||||||||| ||||| ||  |||| ||||||| || |||| ||| |||||||    
T  31072876 gaataccaggttcgatttccagggggaacaacgcttggtcagtgcacatgcctctacgcacgacccagattaatcgtccacctttggtaggttggaaacc 31072975  T
Q  242 agtgcgaaa 250  Q
     ||||||||    
T  31072976 ggtgcgaaa 31072984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 143 - 221
Target Start/End: Original strand, 3763050 - 3763127
Alignment:
Q  143 aataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtcca 221  Q
    ||||||||||||||||  |||||| ||||||| |||||||||||||||| |||||| ||||| | | ||||||||||||    
T  3763050 aataccggattcgattcacagagg-aacaacgcttggtcagtgtgcatgtctctacgcacgaactggattagtcgtcca 3763127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 124 - 250
Target Start/End: Complemental strand, 34662446 - 34662320
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatc 223  Q
    |||||||| |||| || |||||| ||| ||||||||||||  |||| |||| |||||||||  ||||| |||||  || ||||||||||||||||||| |    
T  34662446 tccaaggacgtacttggggaatatcgggttcgattttcaggaggaataacgtttggtcagtacgcatgtctctatgcatgagccgaattagtcgtccacc 34662347  T
Q  224 tatggtgggtcggaaaccagtgcgaaa 250  Q
    | | |||| | |||||||  |||||||    
T  34662346 tttagtggattggaaaccgatgcgaaa 34662320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 124 - 250
Target Start/End: Original strand, 45877434 - 45877560
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatc 223  Q
    |||||||| ||| | | |||||||||| |||||||| ||| || ||||||  |||| |||||  ||||||||||| || |||||| ||||||||| || |    
T  45877434 tccaaggacgtatccggggaataccgggttcgatttccaggggaaacaacacttggccagtgcacatgcctctacgcatgagccggattagtcgttcacc 45877533  T
Q  224 tatggtgggtcggaaaccagtgcgaaa 250  Q
      || ||||||||||||| ||||||||    
T  45877534 attgatgggtcggaaaccggtgcgaaa 45877560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 168 - 250
Target Start/End: Original strand, 47219168 - 47219250
Alignment:
Q  168 aacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaaccagtgcgaaa 250  Q
    ||||||| ||||  |||| |||||||||||| || |||||| |||||||||||| || || ||||||||||||| ||||||||    
T  47219168 aacaacgcttggctagtgcgcatgcctctacgcatgagccggattagtcgtccacctttgatgggtcggaaaccggtgcgaaa 47219250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 141 - 250
Target Start/End: Original strand, 30045818 - 30045927
Alignment:
Q  141 ggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaac 240  Q
    |||||||||| |||||||   || |||||||||| |||| ||||| ||||| |||||| |||||| |  |||||||||||| || || ||||||| ||||    
T  30045818 ggaataccgggttcgattcctagggggaacaacgcttggccagtgcgcatgtctctacgcacgagtctgattagtcgtccacctttgatgggtcgtaaac 30045917  T
Q  241 cagtgcgaaa 250  Q
     |||||||||    
T  30045918 tagtgcgaaa 30045927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 181 - 250
Target Start/End: Complemental strand, 49021273 - 49021204
Alignment:
Q  181 cagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaaccagtgcgaaa 250  Q
    ||||| |||||||||||| || |||||| |||||||||||| |  |||||||||||||||| ||||||||    
T  49021273 cagtgcgcatgcctctacgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaa 49021204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 153 - 250
Target Start/End: Original strand, 54237457 - 54237554
Alignment:
Q  153 tcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaaccagtgcgaaa 250  Q
    ||||||||||| | |||||||  |||||||||| ||||| |||||| || |||||| || ||||||||| |  | |||||||||||||| ||||||||    
T  54237457 tcgattttcagggagaacaacacttggtcagtgcgcatgtctctacgcatgagccggataagtcgtccaccattagtgggtcggaaaccggtgcgaaa 54237554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 142 - 250
Target Start/End: Original strand, 22909782 - 22909889
Alignment:
Q  142 gaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaacc 241  Q
    ||||| ||| ||||||| ||||||| ||||||| | ||  |||| |||| | ||||| || |||||||||||||||| || || || |||||||||||||    
T  22909782 gaatatcgggttcgattctcagagg-aacaacgctaggctagtgcgcatacttctacgcatgagccgaattagtcgtgcacctttgatgggtcggaaacc 22909880  T
Q  242 agtgcgaaa 250  Q
    |||||||||    
T  22909881 agtgcgaaa 22909889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 126 - 202
Target Start/End: Complemental strand, 46529995 - 46529919
Alignment:
Q  126 caaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacac 202  Q
    |||||| ||||||| |||||||||| ||||||| ||||||| ||||| | || | ||||||||||||||||| ||||    
T  46529995 caaggacgtacctggggaataccgggttcgattctcagaggaaacaatgcttcgccagtgtgcatgcctctatacac 46529919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 165 - 240
Target Start/End: Complemental strand, 41630598 - 41630523
Alignment:
Q  165 gggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaac 240  Q
    |||||||||| |||  ||||| ||||||||||||||| |||||| |||||||| ||| || |||| ||||||||||    
T  41630598 gggaacaacgcttgcccagtgcgcatgcctctacacatgagccggattagtcgcccacctttggttggtcggaaac 41630523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 183 - 246
Target Start/End: Complemental strand, 50753409 - 50753346
Alignment:
Q  183 gtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaaccagtgc 246  Q
    |||||||||||||||| |||||| || ||||||||| ||||  |||||||||||||||| ||||    
T  50753409 gtgtgcatgcctctacgcacgagtcggattagtcgttcatcattggtgggtcggaaaccggtgc 50753346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 124 - 250
Target Start/End: Original strand, 25294940 - 25295066
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatc 223  Q
    |||||||| ||| | | |||||||||| || |||| || | || ||||||  |||| ||||| |||||||||||  || |||||| |||||||||||| |    
T  25294940 tccaaggacgtatccggggaataccgggtttgattctctggggaaacaacacttggccagtgcgcatgcctctatgcatgagccggattagtcgtccacc 25295039  T
Q  224 tatggtgggtcggaaaccagtgcgaaa 250  Q
      |||||||| ||||||| ||||||||    
T  25295040 attggtgggttggaaaccggtgcgaaa 25295066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 124 - 250
Target Start/End: Complemental strand, 29762282 - 29762156
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatc 223  Q
    ||||||||||||   | |||||| ||| | ||||| |||| || ||||||  |||| ||||| |||||||||||  || |||| | |||||||||||| |    
T  29762282 tccaaggatgtattcggggaatatcgggtccgattctcaggggcaacaacacttggccagtgcgcatgcctctatgcatgagctggattagtcgtccacc 29762183  T
Q  224 tatggtgggtcggaaaccagtgcgaaa 250  Q
      |||||||||||||||| ||||||||    
T  29762182 attggtgggtcggaaaccggtgcgaaa 29762156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 124 - 250
Target Start/End: Original strand, 35315936 - 35316062
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatc 223  Q
    |||||||| ||||| |  ||||| ||| |||||||  ||| |||||||||  |||| ||||| |||||||||||| || |||| | |||||||| |||      
T  35315936 tccaaggacgtacccggagaatatcgggttcgattcccagggggaacaacacttggccagtgcgcatgcctctacgcatgagctggattagtcgcccact 35316035  T
Q  224 tatggtgggtcggaaaccagtgcgaaa 250  Q
    | ||||||||||||||||  |||||||    
T  35316036 tttggtgggtcggaaaccgatgcgaaa 35316062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 124 - 238
Target Start/End: Complemental strand, 52364927 - 52364813
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatc 223  Q
    |||||||| ||||| | |||||||||  |||||||  |||| ||||||||| |||  ||||| |||||||||||| ||||||| | |||| ||||| | |    
T  52364927 tccaaggacgtacccggggaataccgagttcgattcccagaaggaacaacgcttgaccagtgcgcatgcctctacgcacgagctggattaatcgtctacc 52364828  T
Q  224 tatggtgggtcggaa 238  Q
    | || ||||||||||    
T  52364827 tttgatgggtcggaa 52364813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 164 - 246
Target Start/End: Complemental strand, 55069766 - 55069684
Alignment:
Q  164 agggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaaccagtgc 246  Q
    ||||||||||| |||| |||||  ||||||||||| ||||||||| |||| |||  || || |||||||||||||||| ||||    
T  55069766 agggaacaacgtttggccagtgcacatgcctctacgcacgagccggattaatcgctcacctttggtgggtcggaaaccggtgc 55069684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 141 - 250
Target Start/End: Complemental strand, 2029377 - 2029268
Alignment:
Q  141 ggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaac 240  Q
    |||||| || |||||||||||||  | ||||||| ||||| |||  |||||||||||| || |||| | |||||||| ||| |  || ||||||| ||||    
T  2029377 ggaataacgaattcgattttcaggagaaacaacgcttggttagtacgcatgcctctacgcatgagctggattagtcgcccaccattgatgggtcgcaaac 2029278  T
Q  241 cagtgcgaaa 250  Q
    ||||||||||    
T  2029277 cagtgcgaaa 2029268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 141 - 250
Target Start/End: Complemental strand, 26923371 - 26923262
Alignment:
Q  141 ggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaac 240  Q
    |||||| ||||||||||||| || |  ||||||| ||| |||||| |||||| | |||||||||| || |||| | ||||||   ||||||||| |||||    
T  26923371 ggaatatcggattcgatttttagggaaaacaacgtttgatcagtgcgcatgcatatacacacgagtcggattaattgtccattattggtgggtcagaaac 26923272  T
Q  241 cagtgcgaaa 250  Q
    | ||||||||    
T  26923271 cggtgcgaaa 26923262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 249
Target Start/End: Original strand, 8362574 - 8362682
Alignment:
Q  141 ggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaac 240  Q
    |||||||||| ||| |||  ||| || ||||||| |||| ||||  |||||||||||| || ||||| ||||||||||||| || | |||| || |||||    
T  8362574 ggaataccgggttcaattcccagtggaaacaacgtttggccagtccgcatgcctctacgcatgagccaaattagtcgtccacctttagtggatccgaaac 8362673  T
Q  241 cagtgcgaa 249  Q
    | |||||||    
T  8362674 cggtgcgaa 8362682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 192 - 240
Target Start/End: Original strand, 19873420 - 19873468
Alignment:
Q  192 cctctacacacgagccgaattagtcgtccatctatggtgggtcggaaac 240  Q
    ||||||| ||||||||| ||||||||||||||| | |||||||||||||    
T  19873420 cctctacgcacgagccggattagtcgtccatcttttgtgggtcggaaac 19873468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 221
Target Start/End: Original strand, 49198348 - 49198428
Alignment:
Q  141 ggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtcca 221  Q
    |||||||||| |||||||   || |||||||||  |||| ||||| |||||||||||| || |||||| ||||||||||||    
T  49198348 ggaataccgggttcgattcctagggggaacaacacttggccagtgcgcatgcctctacgcatgagccggattagtcgtcca 49198428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 165 - 216
Target Start/End: Original strand, 13367445 - 13367496
Alignment:
Q  165 gggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtc 216  Q
    |||||||||| ||||||||||||||||||| ||| || |||||| |||||||    
T  13367445 gggaacaacgcttggtcagtgtgcatgcctttacgcatgagccggattagtc 13367496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 143 - 246
Target Start/End: Complemental strand, 22405651 - 22405548
Alignment:
Q  143 aataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaacca 242  Q
    |||||||||||| ||| ||||  ||||||||| ||   || || | |||||| ||  ||||||||| |||| |||||||||| ||||| |||||||||||    
T  22405651 aataccggattctattctcaggaggaacaacgcttaaccaatgcgaatgcctttatgcacgagccggattaatcgtccatctttggtgcgtcggaaacca 22405552  T
Q  243 gtgc 246  Q
    ||||    
T  22405551 gtgc 22405548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 195 - 250
Target Start/End: Complemental strand, 36043730 - 36043675
Alignment:
Q  195 ctacacacgagccgaattagtcgtccatctatggtgggtcggaaaccagtgcgaaa 250  Q
    |||| ||||||||| |||||||| ||| || |||||||||||||||| ||||||||    
T  36043730 ctacgcacgagccggattagtcgcccacctttggtgggtcggaaaccggtgcgaaa 36043675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 166 - 217
Target Start/End: Original strand, 39849093 - 39849144
Alignment:
Q  166 ggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcg 217  Q
    ||||||||| |||| |||||||||||||||||| || |||||| ||||||||    
T  39849093 ggaacaacgcttggccagtgtgcatgcctctacgcatgagccggattagtcg 39849144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 240
Target Start/End: Complemental strand, 45402473 - 45402362
Alignment:
Q  129 ggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatgg 228  Q
    ||||||||| | |||||| ||| |||||||   ||||||||||||  | || | ||| |||||||||||| || |||||| ||||||||| || || | |    
T  45402473 ggatgtacccggggaatatcgggttcgattcctagagggaacaacactcggcctgtgcgcatgcctctacgcatgagccggattagtcgttcacctttag 45402374  T
Q  229 tgggtcggaaac 240  Q
    ||||||||||||    
T  45402373 tgggtcggaaac 45402362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 198
Target Start/End: Complemental strand, 11687236 - 11687162
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctac 198  Q
    |||||||| |||||||  ||||||||| || |||| |||| |||||||| | |||| ||||| ||||||||||||    
T  11687236 tccaaggacgtacctggagaataccgggtttgattctcagggggaacaatgcttggccagtgcgcatgcctctac 11687162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 246
Target Start/End: Complemental strand, 50405686 - 50405608
Alignment:
Q  168 aacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaaccagtgc 246  Q
    ||||||| |||  ||||| |||||||||||| |||||| || |||||||| ||| |  |||||||||||||||| ||||    
T  50405686 aacaacgcttgaccagtgcgcatgcctctacgcacgagtcggattagtcgcccaccattggtgggtcggaaaccggtgc 50405608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 181 - 234
Target Start/End: Complemental strand, 43330802 - 43330749
Alignment:
Q  181 cagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtc 234  Q
    ||||| |||||||||||| ||||||||| |||||||| ||| || |||||||||    
T  43330802 cagtgcgcatgcctctacgcacgagccggattagtcgcccacctttggtgggtc 43330749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 166 - 219
Target Start/End: Complemental strand, 47303574 - 47303521
Alignment:
Q  166 ggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtc 219  Q
    ||||||||  ||||||||||  |||||||||||||| |||||| ||||||||||    
T  47303574 ggaacaacacttggtcagtgcacatgcctctacacatgagccggattagtcgtc 47303521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 239
Target Start/End: Complemental strand, 24146392 - 24146340
Alignment:
Q  187 gcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaa 239  Q
    ||||||||||| ||| ||||||||||||||||||| |  || |||||||||||    
T  24146392 gcatgcctctagacatgagccgaattagtcgtccaccattgatgggtcggaaa 24146340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 250
Target Start/End: Complemental strand, 37319958 - 37319890
Alignment:
Q  182 agtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaaccagtgcgaaa 250  Q
    ||||||||||||||||| ||||||| |||||| ||||||| |  || ||||| ||||||  ||||||||    
T  37319958 agtgtgcatgcctctacgcacgagctgaattaatcgtccaccgttgatgggttggaaactggtgcgaaa 37319890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 66; Significance: 3e-29; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 141 - 250
Target Start/End: Original strand, 3601085 - 3601194
Alignment:
Q  141 ggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaac 240  Q
    |||||||||| ||||||| |||| |||||||||| |||| ||||| |||||||| ||||||||||||| |||||||||||| || |||||||||||||||    
T  3601085 ggaataccggtttcgattctcagggggaacaacgcttggccagtgcgcatgcctatacacacgagccggattagtcgtccacctttggtgggtcggaaac 3601184  T
Q  241 cagtgcgaaa 250  Q
    | ||||||||    
T  3601185 cggtgcgaaa 3601194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 141 - 233
Target Start/End: Complemental strand, 19230667 - 19230576
Alignment:
Q  141 ggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggt 233  Q
    |||||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||| ||||||||| ||||||||| ||||  ||||||||    
T  19230667 ggaataccggattcgattttca-agggaacaacgcttggtcagtatgcatgcctctacgcacgagccggattagtcgttcatcattggtgggt 19230576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 124 - 250
Target Start/End: Complemental strand, 6606223 - 6606097
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatc 223  Q
    |||||||| ||| | | |||||||||| ||||||| |||| |||||||||  |||| |||||| ||||||||||| || |||||| |||||||||||| |    
T  6606223 tccaaggacgtatccggggaataccgggttcgattctcagggggaacaacacttggccagtgtacatgcctctacgcatgagccggattagtcgtccacc 6606124  T
Q  224 tatggtgggtcggaaaccagtgcgaaa 250  Q
      |||||||||||||||| ||||||||    
T  6606123 attggtgggtcggaaaccggtgcgaaa 6606097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 144 - 250
Target Start/End: Complemental strand, 29444871 - 29444765
Alignment:
Q  144 ataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaaccag 243  Q
    ||||||| ||||||||  || |||||||||| |||| ||||| |||||||||||| || |||||| |||||| |||||||| ||||||||||||||| ||    
T  29444871 ataccgggttcgatttctagggggaacaacgcttggccagtgcgcatgcctctacgcatgagccggattagttgtccatctttggtgggtcggaaactag 29444772  T
Q  244 tgcgaaa 250  Q
    |||||||    
T  29444771 tgcgaaa 29444765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 124 - 250
Target Start/End: Complemental strand, 5253349 - 5253223
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatc 223  Q
    |||||||| ||||| | |||||||||| |||||||  ||| |||||||||  |||| ||||| |||||||||||| || |||||| |||| ||| ||| |    
T  5253349 tccaaggacgtacccggggaataccgggttcgattcccagggggaacaacacttggccagtgcgcatgcctctacgcatgagccggattaatcgcccacc 5253250  T
Q  224 tatggtgggtcggaaaccagtgcgaaa 250  Q
    | |||||||||||||||| ||||||||    
T  5253249 tttggtgggtcggaaaccggtgcgaaa 5253223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 124 - 250
Target Start/End: Complemental strand, 29333264 - 29333139
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatc 223  Q
    |||||||| |||||   |||||||||| |||||||| ||| |||||||||| |||| ||||| |||||||||||| || ||||||||| ||||||||| |    
T  29333264 tccaaggacgtacccagggaataccgggttcgatttccag-gggaacaacgtttggccagtgcgcatgcctctacgcatgagccgaatcagtcgtccacc 29333166  T
Q  224 tatggtgggtcggaaaccagtgcgaaa 250  Q
    | |||| |||||| |||| ||||||||    
T  29333165 tttggtaggtcggtaaccggtgcgaaa 29333139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 124 - 250
Target Start/End: Complemental strand, 34954745 - 34954619
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatc 223  Q
    |||||||| ||||||| |||||||| | ||||||| |||| |||||||||| |||| |||||  ||| ||||||| || |||||  |||||||||||| |    
T  34954745 tccaaggacgtacctggggaataccaggttcgattctcagggggaacaacgtttggccagtgcacatacctctacgcatgagccagattagtcgtccacc 34954646  T
Q  224 tatggtgggtcggaaaccagtgcgaaa 250  Q
    | || |||||||||||||| |||||||    
T  34954645 tttgatgggtcggaaaccaatgcgaaa 34954619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 141 - 250
Target Start/End: Original strand, 12606431 - 12606540
Alignment:
Q  141 ggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaac 240  Q
    |||||||| |||||||||| ||| |||||||||| |||| ||||| |||||||||||| ||||||||| |||||||| ||| || ||||| |  ||||||    
T  12606431 ggaataccagattcgatttccagggggaacaacgtttggccagtgcgcatgcctctacgcacgagccggattagtcgcccacctttggtgagctggaaac 12606530  T
Q  241 cagtgcgaaa 250  Q
    | ||||||||    
T  12606531 cggtgcgaaa 12606540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 167 - 250
Target Start/End: Complemental strand, 9633708 - 9633625
Alignment:
Q  167 gaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaaccagtgcgaaa 250  Q
    |||||||| |||| ||||| |||||||||||| ||||||||| |||||||| ||| || |||||||||||||||| ||||||||    
T  9633708 gaacaacgcttggccagtgcgcatgcctctacgcacgagccggattagtcgcccacctttggtgggtcggaaaccggtgcgaaa 9633625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 141 - 250
Target Start/End: Complemental strand, 13036113 - 13036004
Alignment:
Q  141 ggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatcta-tggtgggtcggaaa 239  Q
    |||||| ||| |||||||||||| |||||||||  |||| ||||| |||||||||||| || |||||  |||||||||||| ||| ||||||||||||||    
T  13036113 ggaatatcgggttcgattttcagggggaacaacacttggccagtgcgcatgcctctacgcatgagccagattagtcgtcca-ctattggtgggtcggaaa 13036015  T
Q  240 ccagtgcgaaa 250  Q
    || ||||||||    
T  13036014 ccggtgcgaaa 13036004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 124 - 250
Target Start/End: Original strand, 21898632 - 21898758
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatc 223  Q
    |||||||| ||| | | |||||||||| |||||||  |||  ||||||||| |||| ||||| |||||||||||| || |||||| ||||||||| || |    
T  21898632 tccaaggacgtatccggggaataccgggttcgattcccaggaggaacaacgcttggccagtgcgcatgcctctacgcatgagccggattagtcgttcacc 21898731  T
Q  224 tatggtgggtcggaaaccagtgcgaaa 250  Q
    | | |||||||||||||| ||||||||    
T  21898732 tttagtgggtcggaaaccggtgcgaaa 21898758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 165 - 250
Target Start/End: Original strand, 19089523 - 19089608
Alignment:
Q  165 gggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaaccagtgcgaaa 250  Q
    |||||||||  |||| ||||| |||||||||||| ||||||||| |||||||||| | || |||||||||||||||| ||||||||    
T  19089523 gggaacaacacttggccagtgagcatgcctctacgcacgagccggattagtcgtctacctttggtgggtcggaaaccggtgcgaaa 19089608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 166 - 250
Target Start/End: Complemental strand, 30788937 - 30788853
Alignment:
Q  166 ggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaaccagtgcgaaa 250  Q
    ||||||||| |||| ||||| |||||||||||  ||||||||| |||||||| ||| || |||||||||||||||| ||||||||    
T  30788937 ggaacaacgtttggccagtgcgcatgcctctaggcacgagccggattagtcgcccacctttggtgggtcggaaaccggtgcgaaa 30788853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 141 - 246
Target Start/End: Complemental strand, 2271410 - 2271307
Alignment:
Q  141 ggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaac 240  Q
    |||||||||| ||||||| ||||||  ||||||| || | ||||| ||||| |||||| ||||||||| |||||||||||| || || |||||| |||||    
T  2271410 ggaataccgggttcgattctcagag--aacaacgcttagccagtgcgcatgtctctacgcacgagccggattagtcgtccacctttgatgggtcagaaac 2271313  T
Q  241 cagtgc 246  Q
    ||||||    
T  2271312 cagtgc 2271307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 165 - 250
Target Start/End: Original strand, 13468958 - 13469043
Alignment:
Q  165 gggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaaccagtgcgaaa 250  Q
    |||||||||||||||||||||  ||||||||||| ||||||||  |||||||| ||| |  |||||||| ||||||| ||||||||    
T  13468958 gggaacaacgattggtcagtgcacatgcctctacgcacgagccagattagtcgcccaccattggtgggttggaaaccggtgcgaaa 13469043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 142 - 222
Target Start/End: Original strand, 13391289 - 13391368
Alignment:
Q  142 gaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccat 222  Q
    ||||| |||||||||||||||| |||||||| | |||| ||||| |||||||||||| ||||||||| |||||||| ||||    
T  13391289 gaatatcggattcgattttcag-gggaacaatgtttggccagtgcgcatgcctctacgcacgagccggattagtcgcccat 13391368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 182 - 250
Target Start/End: Complemental strand, 14783488 - 14783420
Alignment:
Q  182 agtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaaccagtgcgaaa 250  Q
    ||||||||||||||||| || |||||| |||||||||||| |  |||||||||||||||| ||||||||    
T  14783488 agtgtgcatgcctctacgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcgaaa 14783420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 124 - 195
Target Start/End: Original strand, 32048435 - 32048506
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctc 195  Q
    |||||||||||||  | |||||| | |||||||||||||| | |||||||| ||||||||||||||||||||    
T  32048435 tccaaggatgtactcgaggaatatcagattcgattttcagggagaacaacgtttggtcagtgtgcatgcctc 32048506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 152 - 250
Target Start/End: Original strand, 5029829 - 5029927
Alignment:
Q  152 ttcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaaccagtgcgaaa 250  Q
    ||||||| |||| | |||||||| |||||||||| |||||||||||| || |||  | |||||||| |||||| || ||||||||||||  ||||||||    
T  5029829 ttcgattctcagggagaacaacgtttggtcagtgcgcatgcctctacgcatgagttggattagtcgcccatctttgatgggtcggaaactggtgcgaaa 5029927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 124 - 250
Target Start/End: Complemental strand, 8612100 - 8611974
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatc 223  Q
    |||||||| ||||| | |||||||||| |||||||   ||  ||||||||| |||  |||||||||||| ||||| || || ||| |||||||| ||| |    
T  8612100 tccaaggacgtacccggggaataccgggttcgattccgaggaggaacaacgcttgaccagtgtgcatgcttctacgcatgaaccggattagtcgcccacc 8612001  T
Q  224 tatggtgggtcggaaaccagtgcgaaa 250  Q
    | ||||||||| |||||| ||||||||    
T  8612000 tttggtgggtcagaaaccggtgcgaaa 8611974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 124 - 214
Target Start/End: Complemental strand, 9366549 - 9366459
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattag 214  Q
    ||||||||||||| || |||||| | | ||||||||| || ||||| |||| |||| ||||| |||||||||||| ||||||||| |||||    
T  9366549 tccaaggatgtacttggggaatatcaggttcgatttttagggggaataacgcttggccagtgcgcatgcctctacgcacgagccggattag 9366459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 188 - 250
Target Start/End: Complemental strand, 8149859 - 8149797
Alignment:
Q  188 catgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaaccagtgcgaaa 250  Q
    ||||||||||| ||  |||||||||||||||||| || |||||||| ||||||| ||||||||    
T  8149859 catgcctctacgcattagccgaattagtcgtccacctttggtgggttggaaaccggtgcgaaa 8149797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 124 - 250
Target Start/End: Original strand, 8932645 - 8932771
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatc 223  Q
    |||||||||||| | | |||||| ||| |||||||  ||| |||||||||  ||||  |||| |||||||||||| || |||||| |||| ||  ||| |    
T  8932645 tccaaggatgtatccggggaatatcgggttcgattcccagggggaacaacacttggctagtgcgcatgcctctacgcatgagccggattaatcacccacc 8932744  T
Q  224 tatggtgggtcggaaaccagtgcgaaa 250  Q
    | || ||||||||||||| ||||||||    
T  8932745 tttgatgggtcggaaaccggtgcgaaa 8932771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 124 - 250
Target Start/End: Original strand, 8944111 - 8944237
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatc 223  Q
    |||||||||||| | | |||||| ||| |||||||  ||| |||||||||  ||||  |||| |||||||||||| || |||||| |||| ||  ||| |    
T  8944111 tccaaggatgtatccggggaatatcgggttcgattcccagggggaacaacacttggctagtgcgcatgcctctacgcatgagccggattaatcacccacc 8944210  T
Q  224 tatggtgggtcggaaaccagtgcgaaa 250  Q
    | || ||||||||||||| ||||||||    
T  8944211 tttgatgggtcggaaaccggtgcgaaa 8944237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 187 - 241
Target Start/End: Original strand, 33940058 - 33940112
Alignment:
Q  187 gcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaacc 241  Q
    |||||||||||||||||||||| ||||||||||||||| ||  |||||| |||||    
T  33940058 gcatgcctctacacacgagccggattagtcgtccatctttgacgggtcgaaaacc 33940112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 181 - 250
Target Start/End: Original strand, 8938752 - 8938821
Alignment:
Q  181 cagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaaccagtgcgaaa 250  Q
    ||||| ||| || ||||| || ||||||||||||||||||| || || ||||||||||||| ||||||||    
T  8938752 cagtgcgcaagcatctacgcatgagccgaattagtcgtccacctttgatgggtcggaaaccggtgcgaaa 8938821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 141 - 250
Target Start/End: Complemental strand, 14107467 - 14107358
Alignment:
Q  141 ggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaac 240  Q
    |||||||||| |||||||  |||  ||||||||| |||  |||||  ||||||||||| || |||||| |||||||| ||||   | |||||||||||||    
T  14107467 ggaataccgggttcgattcccaggaggaacaacgcttgaccagtgcacatgcctctacgcatgagccggattagtcgcccattattagtgggtcggaaac 14107368  T
Q  241 cagtgcgaaa 250  Q
    | ||||||||    
T  14107367 cggtgcgaaa 14107358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 124 - 239
Target Start/End: Complemental strand, 9179862 - 9179747
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatc 223  Q
    |||||||| |||||   |||||||||| |||||||  ||| |||||||||  |||  |||| ||||| ||||||| || |||| | |||||||||||| |    
T  9179862 tccaaggacgtacccagggaataccgggttcgattcccagggggaacaacacttgaccagtatgcatacctctacgcatgagctggattagtcgtccacc 9179763  T
Q  224 tatggtgggtcggaaa 239  Q
    | |||||| |||||||    
T  9179762 tttggtggatcggaaa 9179747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 250
Target Start/End: Original strand, 12635842 - 12635924
Alignment:
Q  168 aacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatcta-tggtgggtcggaaaccagtgcgaaa 250  Q
    ||||||| ||||  |||| |||||||||||| ||| ||||| |||||||| ||| ||| |||||||||||||||| ||||||||    
T  12635842 aacaacgcttggctagtgcgcatgcctctacgcacaagccggattagtcgccca-ctattggtgggtcggaaaccggtgcgaaa 12635924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 220
Target Start/End: Complemental strand, 24671974 - 24671896
Alignment:
Q  142 gaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtcc 220  Q
    ||||||||| ||| |||  |||||||||||||  |||  |||||||||||||||||| ||| ||||| |||||| ||||    
T  24671974 gaataccgggttctattcccagagggaacaacacttgaccagtgtgcatgcctctacgcacaagccggattagtagtcc 24671896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 250
Target Start/End: Original strand, 31129163 - 31129287
Alignment:
Q  126 caaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatcta 225  Q
    |||||| ||||||| | ||||| | |||| |||  ||| |||| ||||| ||||  |||| |||||||||||| || |||||  |||||| || || ||     
T  31129163 caaggacgtacctgagcaatactgaattcaattcacagggggagcaacgcttggctagtgcgcatgcctctacgcatgagccagattagttgtgcacctt 31129262  T
Q  226 tggtgggtcggaaaccagtgcgaaa 250  Q
    ||||| |||||||||| ||||||||    
T  31129263 tggtgagtcggaaaccggtgcgaaa 31129287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 63; Significance: 2e-27; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 152 - 246
Target Start/End: Original strand, 23658190 - 23658284
Alignment:
Q  152 ttcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaaccagtgc 246  Q
    |||||||| ||| |||||||||| |||| |||||||||||||||||||||||||||| ||||||||||||||| ||||||||| |||||| ||||    
T  23658190 ttcgatttccagggggaacaacgcttggccagtgtgcatgcctctacacacgagccggattagtcgtccatctttggtgggtcagaaacctgtgc 23658284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 124 - 250
Target Start/End: Complemental strand, 38578993 - 38578867
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatc 223  Q
    |||||||| ||||| | |||||| ||| |||||||  ||| |||||||||| |||| ||||| |||||||||||| || |||||| |||||||| ||| |    
T  38578993 tccaaggacgtacccggggaatatcgggttcgattcccagggggaacaacgcttggccagtgcgcatgcctctacgcatgagccggattagtcgcccacc 38578894  T
Q  224 tatggtgggtcggaaaccagtgcgaaa 250  Q
    | |||||||||||||||| ||||||||    
T  38578893 tttggtgggtcggaaaccggtgcgaaa 38578867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 124 - 250
Target Start/End: Original strand, 22973950 - 22974076
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatc 223  Q
    |||||||| ||||  | |||||||||| ||||||| |||| |||||||||| |||| |||||||||||| ||||| || |||||  |||||||||||| |    
T  22973950 tccaaggacgtactcggggaataccgggttcgattctcagggggaacaacgcttggccagtgtgcatgcgtctacgcatgagccagattagtcgtccacc 22974049  T
Q  224 tatggtgggtcggaaaccagtgcgaaa 250  Q
    | ||||||||| |||||| | ||||||    
T  22974050 tttggtgggtcagaaaccggcgcgaaa 22974076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 141 - 250
Target Start/End: Complemental strand, 17748491 - 17748382
Alignment:
Q  141 ggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaac 240  Q
    |||||||||| |||||||  ||| |||||||||| |||| ||||| ||||||||||||  |||||||| |||||||||||| || || ||||||||||||    
T  17748491 ggaataccgggttcgattcccagggggaacaacgcttggccagtgcgcatgcctctacgtacgagccggattagtcgtccacctttgttgggtcggaaac 17748392  T
Q  241 cagtgcgaaa 250  Q
    |  |||||||    
T  17748391 cgatgcgaaa 17748382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 124 - 250
Target Start/End: Complemental strand, 10048002 - 10047876
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatc 223  Q
    |||||||| ||| | | |||||||||| |||||||  ||| |||||||||  |||| ||||| ||| |||||||| || |||| |||||||||||||| |    
T  10048002 tccaaggacgtatccggggaataccgggttcgattcccagggggaacaacacttggccagtgcgcaggcctctacgcatgagcagaattagtcgtccacc 10047903  T
Q  224 tatggtgggtcggaaaccagtgcgaaa 250  Q
      |||||||||||||||| ||||||||    
T  10047902 attggtgggtcggaaaccggtgcgaaa 10047876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 124 - 250
Target Start/End: Original strand, 21530731 - 21530857
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatc 223  Q
    |||||||| ||||||| ||||||| || || ||||  ||| |||||||||  ||||||||||  ||||||||||| |||||||||||||| |||  || |    
T  21530731 tccaaggacgtacctggggaatactgggtttgattcccagggggaacaacacttggtcagtgcacatgcctctacgcacgagccgaattaatcgctcacc 21530830  T
Q  224 tatggtgggtcggaaaccagtgcgaaa 250  Q
    | |||||||||||||||| || |||||    
T  21530831 tttggtgggtcggaaaccggttcgaaa 21530857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 124 - 250
Target Start/End: Original strand, 27028262 - 27028388
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatc 223  Q
    |||||| | ||||||| | |||||| | |||||||| ||| |||||||||  |||| ||||| ||||||||||||||| |||| | ||||||||  || |    
T  27028262 tccaagaacgtacctgggaaataccaggttcgatttccagggggaacaacacttggccagtgcgcatgcctctacacatgagctggattagtcgctcacc 27028361  T
Q  224 tatggtgggtcggaaaccagtgcgaaa 250  Q
    | |||||||||||||||| ||||||||    
T  27028362 tttggtgggtcggaaaccggtgcgaaa 27028388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 124 - 250
Target Start/End: Original strand, 34659209 - 34659335
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatc 223  Q
    |||| ||||||||| | |||||||||| ||||||| |||  |||||||||| |||  ||||| |||||||||||| ||||||||| |||||||| ||| |    
T  34659209 tccagggatgtacccggggaataccgggttcgattctcaaggggaacaacgcttgaccagtgcgcatgcctctacgcacgagccggattagtcgcccacc 34659308  T
Q  224 tatggtgggtcggaaaccagtgcgaaa 250  Q
      ||||| |||| ||||| ||||||||    
T  34659309 attggtgtgtcgaaaaccggtgcgaaa 34659335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 124 - 250
Target Start/End: Original strand, 37514904 - 37515030
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatc 223  Q
    ||||||||  |||| | ||||||| || |||||||||||| |||||||||| |||||||||| ||||| |||||| ||||||||| |||| |||| || |    
T  37514904 tccaaggacatacccggggaatactgggttcgattttcagtgggaacaacgtttggtcagtgcgcatgtctctacgcacgagccggattaatcgttcacc 37515003  T
Q  224 tatggtgggtcggaaaccagtgcgaaa 250  Q
      | |||||||||||||| ||| ||||    
T  37515004 attagtgggtcggaaaccggtgtgaaa 37515030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 124 - 250
Target Start/End: Complemental strand, 43346905 - 43346779
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatc 223  Q
    ||||| || ||| ||| |||||||||| ||| ||| |||  |||||||||  |||| | ||| ||||||||||||  |||||||| ||||||||  ||||    
T  43346905 tccaaagacgtatctggggaataccgggttcaattctcaaggggaacaacacttggccggtgcgcatgcctctacgtacgagccggattagtcgctcatc 43346806  T
Q  224 tatggtgggtcggaaaccagtgcgaaa 250  Q
    | |||||||||||||||||||||||||    
T  43346805 tttggtgggtcggaaaccagtgcgaaa 43346779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 124 - 250
Target Start/End: Original strand, 48804666 - 48804792
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatc 223  Q
    |||||||| ||| | | |||||||||| |||||||  ||  |||||||||  |||| ||||| |||||||||||| || |||||| |||||||||||| |    
T  48804666 tccaaggacgtatccggggaataccgggttcgattcccaaggggaacaacacttggccagtgcgcatgcctctacgcatgagccggattagtcgtccacc 48804765  T
Q  224 tatggtgggtcggaaaccagtgcgaaa 250  Q
      |||||||||||||||| ||||||||    
T  48804766 attggtgggtcggaaaccggtgcgaaa 48804792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 124 - 217
Target Start/End: Original strand, 16802106 - 16802199
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcg 217  Q
    |||||||| ||||| | |||||||||||||||||| | ||  |||||||||||||| ||||| | |||||||||| ||||||||| ||||||||    
T  16802106 tccaaggacgtacccggggaataccggattcgattcttaggaggaacaacgattggccagtgcgtatgcctctacgcacgagccggattagtcg 16802199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 165 - 250
Target Start/End: Original strand, 39474964 - 39475049
Alignment:
Q  165 gggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaaccagtgcgaaa 250  Q
    |||||||||| |||||||||| |||| ||||||| || |||||| |||||||||||| || | |||||||| ||||||||||||||    
T  39474964 gggaacaacgcttggtcagtgcgcatacctctacgcatgagccggattagtcgtccacctttagtgggtcgaaaaccagtgcgaaa 39475049  T

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Target: chr7; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 118 - 250
Target Start/End: Complemental strand, 5069947 - 5069815
Alignment:
Q  118 gcttcatccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcg 217  Q
    ||||| || ||||| ||||| | | |||||||| |||||||| |||  ||||||||| || |  ||||||||||||||||| ||| ||||| ||||||||    
T  5069947 gcttcttctaaggacgtacccgggaaataccgggttcgatttccaggaggaacaacgcttagctagtgtgcatgcctctacgcacaagccggattagtcg 5069848  T
Q  218 tccatctatggtgggtcggaaaccagtgcgaaa 250  Q
     ||| || ||||||||||||||||  |||||||    
T  5069847 cccacctttggtgggtcggaaaccgatgcgaaa 5069815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 155 - 250
Target Start/End: Original strand, 41945488 - 41945582
Alignment:
Q  155 gattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaaccagtgcgaaa 250  Q
    |||||||| |||||| |||| |||| ||||| |||||||||||| ||||||||| |||||||||||| || ||||| |||||||| | ||||||||    
T  41945488 gattttca-agggaataacgcttggccagtgcgcatgcctctacgcacgagccggattagtcgtccacctttggtgagtcggaaatcggtgcgaaa 41945582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 124 - 250
Target Start/End: Complemental strand, 22993493 - 22993367
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatc 223  Q
    |||||||| ||||| | |||||| ||| |||||||   ||  ||||||||| |||| |||||||||||||||||| ||||| ||| ||||||||  || |    
T  22993493 tccaaggacgtacccggggaatatcgggttcgattccgaggaggaacaacgcttggccagtgtgcatgcctctacgcacgaaccggattagtcgctcacc 22993394  T
Q  224 tatggtgggtcggaaaccagtgcgaaa 250  Q
    | ||||||||| |||||| ||||||||    
T  22993393 tttggtgggtcagaaaccggtgcgaaa 22993367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 124 - 250
Target Start/End: Complemental strand, 43862098 - 43861972
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatc 223  Q
    ||||| || ||| ||| |||||||||| |||||||  ||| |||||||||| |||| ||||| |||||||||||| || |||||| ||||||| | || |    
T  43862098 tccaaagacgtatctggggaataccgggttcgattcccagggggaacaacgtttggccagtgcgcatgcctctacgcatgagccggattagtcattcacc 43861999  T
Q  224 tatggtgggtcggaaaccagtgcgaaa 250  Q
    | |||||| ||| ||||| ||||||||    
T  43861998 tttggtggatcgaaaaccggtgcgaaa 43861972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 124 - 249
Target Start/End: Original strand, 18785652 - 18785777
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatc 223  Q
    |||||||| ||||| | |||||||||| |||||||   || |||||||||  |||| ||||| |||||||||||| || || | | ||||||||| || |    
T  18785652 tccaaggacgtacccggggaataccgggttcgattcctagggggaacaacacttggccagtgcgcatgcctctacgcatgaactggattagtcgttcacc 18785751  T
Q  224 tatggtgggtcggaaaccagtgcgaa 249  Q
    | |||||||||||||||| |||||||    
T  18785752 tctggtgggtcggaaaccggtgcgaa 18785777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 141 - 250
Target Start/End: Complemental strand, 36619363 - 36619254
Alignment:
Q  141 ggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaac 240  Q
    |||||||||| |||||||  ||| |||||||||  |||  |||||||||||||||||| || |||||| |||||||||||| |  |||||||||  ||||    
T  36619363 ggaataccgggttcgattcccagggggaacaacacttgtccagtgtgcatgcctctacgcatgagccggattagtcgtccaccattggtgggtcaaaaac 36619264  T
Q  241 cagtgcgaaa 250  Q
    ||||| ||||    
T  36619263 cagtgtgaaa 36619254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 126 - 246
Target Start/End: Original strand, 13095843 - 13095963
Alignment:
Q  126 caaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatcta 225  Q
    |||||| ||||| | |||||||||| ||| |||  ||| |||||||||  |||| ||||| |||||||||||| || |||||| ||||||||  || ||     
T  13095843 caaggacgtacccggggaataccgggttctattcccagggggaacaacacttggccagtgcgcatgcctctacgcatgagccggattagtcgctcacctt 13095942  T
Q  226 tggtgggtcggaaaccagtgc 246  Q
    |||||||||||||||| ||||    
T  13095943 tggtgggtcggaaaccggtgc 13095963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 124 - 246
Target Start/End: Original strand, 1797443 - 1797565
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatc 223  Q
    |||||||| ||| | | |||||||||| |||||||  ||| || ||||||| |||| ||||| ||||| |||||| ||||||||| | ||||||||||||    
T  1797443 tccaaggacgtatccgaggaataccgggttcgattcccaggggaaacaacgcttggccagtgcgcatgtctctacgcacgagccggactagtcgtccatc 1797542  T
Q  224 tatggtgggtcggaaaccagtgc 246  Q
    | || ||| ||| ||||| ||||    
T  1797543 tttgatggatcgaaaaccggtgc 1797565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 124 - 250
Target Start/End: Original strand, 47341859 - 47341985
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatc 223  Q
    |||||||| ||||| | |||||||||  |||||||  ||| |||||||||  |||| ||||| |||||||||||| ||||||| | ||| ||||| || |    
T  47341859 tccaaggacgtacccggggaataccgagttcgattcccagggggaacaacacttggccagtgcgcatgcctctacgcacgagcaggattggtcgttcacc 47341958  T
Q  224 tatggtgggtcggaaaccagtgcgaaa 250  Q
      |||||||||||||| | ||||||||    
T  47341959 attggtgggtcggaaatcggtgcgaaa 47341985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 165 - 250
Target Start/End: Complemental strand, 8734771 - 8734686
Alignment:
Q  165 gggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaaccagtgcgaaa 250  Q
    |||||||| | |||| ||||| ||||||||| || ||||||||  |||||||| ||| || |||||||||||||||| ||||||||    
T  8734771 gggaacaatgcttgggcagtgcgcatgcctcaacgcacgagccagattagtcgcccacctttggtgggtcggaaaccggtgcgaaa 8734686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 141 - 250
Target Start/End: Complemental strand, 27875197 - 27875088
Alignment:
Q  141 ggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaac 240  Q
    ||||||||||||||||||  ||| ||||| |||  |||| |||||  ||||||||||| || ||| || |||||||||||| || | |||||||| ||||    
T  27875197 ggaataccggattcgattcccagggggaataacacttggccagtgcacatgcctctacgcatgagtcgcattagtcgtccacctttagtgggtcgaaaac 27875098  T
Q  241 cagtgcgaaa 250  Q
    | ||||||||    
T  27875097 cggtgcgaaa 27875088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 165 - 250
Target Start/End: Original strand, 28744186 - 28744271
Alignment:
Q  165 gggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaaccagtgcgaaa 250  Q
    |||||||| | |||| ||||  |||| |||||||| |||||||| |||||||||||| || |||||||||||||||  ||||||||    
T  28744186 gggaacaatgcttggccagtacgcatacctctacatacgagccggattagtcgtccacctttggtgggtcggaaactggtgcgaaa 28744271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 165 - 250
Target Start/End: Complemental strand, 29805525 - 29805440
Alignment:
Q  165 gggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaaccagtgcgaaa 250  Q
    |||||||||| |||||||||| ||||| |||||| || ||||| ||||| ||||| | || | ||| |||||||||||||||||||    
T  29805525 gggaacaacgtttggtcagtgcgcatgtctctacgcatgagccaaattaatcgtctacctttagtgagtcggaaaccagtgcgaaa 29805440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 141 - 250
Target Start/End: Complemental strand, 45697298 - 45697190
Alignment:
Q  141 ggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaac 240  Q
    |||||| | ||||||||| |||| |||||||||  ||| |||||| |||||||||||| || |||  |  ||||||||||| || |||||||||||||||    
T  45697298 ggaatatcagattcgattctcag-gggaacaacacttgatcagtgcgcatgcctctacgcatgagttgggttagtcgtccacctttggtgggtcggaaac 45697200  T
Q  241 cagtgcgaaa 250  Q
    |||| |||||    
T  45697199 cagtacgaaa 45697190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 124 - 215
Target Start/End: Original strand, 43925495 - 43925586
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagt 215  Q
    |||||||| ||||| | |||||||||| |||||||  ||| |||||||||  |||||||||| |||||||||||| || |||| | ||||||    
T  43925495 tccaaggacgtacccggggaataccgggttcgattcccagggggaacaacacttggtcagtgcgcatgcctctacgcatgagctggattagt 43925586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 176 - 250
Target Start/End: Original strand, 3353459 - 3353533
Alignment:
Q  176 ttggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaaccagtgcgaaa 250  Q
    |||| ||||| |||||||||||| ||||||||| |||||||||||| || || ||| || |||||| ||||||||    
T  3353459 ttggccagtgcgcatgcctctacgcacgagccggattagtcgtccacctttgatggatcagaaaccggtgcgaaa 3353533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 124 - 250
Target Start/End: Complemental strand, 26423413 - 26423288
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatc 223  Q
    |||||||| |||||   |||||||||| |||||||  ||| || ||||||| |||| |||||  | ||||||||| ||||||||  ||||||||| || |    
T  26423413 tccaaggacgtacccaaggaataccgggttcgattcccaggggaaacaacgcttggccagtgcacctgcctctacgcacgagccagattagtcgttcacc 26423314  T
Q  224 tatggtgggtcggaaaccagtgcgaaa 250  Q
    | |||||| ||||||||| ||||||||    
T  26423313 tttggtgg-tcggaaaccggtgcgaaa 26423288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 141 - 219
Target Start/End: Original strand, 30827292 - 30827370
Alignment:
Q  141 ggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtc 219  Q
    |||||||| | |||||||||||| | |||||||  |||| ||||  |||||||||||| ||||||||| ||||||||||    
T  30827292 ggaataccaggttcgattttcagggagaacaacacttggccagtacgcatgcctctacgcacgagccggattagtcgtc 30827370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 124 - 250
Target Start/End: Complemental strand, 42210388 - 42210262
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatc 223  Q
    |||||||| ||| | | |||||||||| |||||||  ||| |  ||||||| |||| ||||| |||||||||||| ||||||||| |||| ||  ||| |    
T  42210388 tccaaggacgtatccgaggaataccggcttcgattcccagtgaaaacaacgtttggccagtgcgcatgcctctacgcacgagccggattaatcacccacc 42210289  T
Q  224 tatggtgggtcggaaaccagtgcgaaa 250  Q
      ||||||||||||||||  |||||||    
T  42210288 gttggtgggtcggaaaccgatgcgaaa 42210262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 141 - 250
Target Start/End: Complemental strand, 21190889 - 21190780
Alignment:
Q  141 ggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaac 240  Q
    |||||||||| |||||||   ||  ||| ||||| ||||  |||| |||||||||||| |||||| |  |||||||| ||||| ||||||||||| ||||    
T  21190889 ggaataccgggttcgattcctaggaggagcaacgcttggctagtgcgcatgcctctacgcacgagtcagattagtcgcccatcaatggtgggtcgaaaac 21190790  T
Q  241 cagtgcgaaa 250  Q
    | ||||||||    
T  21190789 cggtgcgaaa 21190780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 250
Target Start/End: Original strand, 29151932 - 29152049
Alignment:
Q  133 gtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtggg 232  Q
    ||||||| |||||||||| |||||||  |||   |||||||| |||  ||||| |||||||||||||||||| ||| |||| ||||| | |  || ||||    
T  29151932 gtacctgaggaataccgggttcgattcccaggaagaacaacgtttgaccagtgcgcatgcctctacacacgatccggattaatcgtctaccattgatggg 29152031  T
Q  233 tcggaaaccagtgcgaaa 250  Q
    |||||||||  |||||||    
T  29152032 tcggaaaccgatgcgaaa 29152049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 124 - 241
Target Start/End: Original strand, 42032079 - 42032196
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatc 223  Q
    |||||||| ||||| | |||||||| | |||||||  ||  |||||||||| |||| |||||  ||| | ||||| || ||||||||||||| ||||| |    
T  42032079 tccaaggacgtacccggggaatacctggttcgattcccacggggaacaacgtttggccagtgcacatacatctacgcatgagccgaattagttgtccacc 42032178  T
Q  224 tatggtgggtcggaaacc 241  Q
    | || |||||||||||||    
T  42032179 tttgatgggtcggaaacc 42032196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 178 - 250
Target Start/End: Original strand, 3603394 - 3603466
Alignment:
Q  178 ggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaaccagtgcgaaa 250  Q
    |||||||| |||||||||||| ||||||||| |||| |||| ||  | |||||||||||||| | ||||||||    
T  3603394 ggtcagtgcgcatgcctctacgcacgagccggattaatcgttcacttttggtgggtcggaaatcggtgcgaaa 3603466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 217
Target Start/End: Original strand, 14535291 - 14535367
Alignment:
Q  141 ggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcg 217  Q
    |||||||||| ||  |||||||| | |||||||  |||| |||||||||||||||||| ||||||| | ||||||||    
T  14535291 ggaataccgggtttcattttcagggagaacaacacttggccagtgtgcatgcctctacgcacgagctggattagtcg 14535367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 246
Target Start/End: Original strand, 39420823 - 39420942
Alignment:
Q  126 caaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatcta 225  Q
    |||||| ||||| | |||||||||| ||||| |  || ||||||||||| |||| ||||| || ||||||||| || |||||| |||||||||| | ||     
T  39420823 caaggaggtacccggggaataccgg-ttcgaatcccaaagggaacaacgcttggccagtgcgcgtgcctctacgcatgagccggattagtcgtctacctt 39420921  T
Q  226 tggtgggtcggaaaccagtgc 246  Q
    || |||| |||||||| ||||    
T  39420922 tgatgggccggaaaccggtgc 39420942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 250
Target Start/End: Original strand, 48551883 - 48551966
Alignment:
Q  167 gaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaaccagtgcgaaa 250  Q
    |||||||| |||| || || ||||||||||||  | |||||| |||||||||||| || || ||| ||||||||| ||||||||    
T  48551883 gaacaacggttggccaatgcgcatgcctctacgtatgagccggattagtcgtccacctttgatggatcggaaaccggtgcgaaa 48551966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 141 - 250
Target Start/End: Complemental strand, 4195311 - 4195202
Alignment:
Q  141 ggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaac 240  Q
    |||||||||  |||||||| |||  ||||||||  ||||  |||| |||||||||||| || |||||| ||||| |||||| |  |||||||| ||||||    
T  4195311 ggaataccgagttcgatttccaggaggaacaacatttggctagtgcgcatgcctctacgcatgagccggattagccgtccaccattggtgggttggaaac 4195212  T
Q  241 cagtgcgaaa 250  Q
    |  |||||||    
T  4195211 cgatgcgaaa 4195202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 63; Significance: 2e-27; HSPs: 58)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 124 - 250
Target Start/End: Original strand, 2559292 - 2559418
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatc 223  Q
    |||||||| ||||||| |||||||||||||||||||  ||  ||||||||| |||| ||||| |||||||||||| ||| ||||| |||| ||||||| |    
T  2559292 tccaaggacgtacctggggaataccggattcgatttctaggaggaacaacgcttggccagtgcgcatgcctctacgcacaagccggattactcgtccacc 2559391  T
Q  224 tatggtgggtcggaaaccagtgcgaaa 250  Q
    | |||||||||||||||| ||||||||    
T  2559392 tttggtgggtcggaaaccggtgcgaaa 2559418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 143 - 250
Target Start/End: Complemental strand, 40780968 - 40780861
Alignment:
Q  143 aataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaacca 242  Q
    |||| ||| ||||||| |||  |||||||||| |||||||||| |||||||||||| || |||||| |||||||||||| || ||||||||||||||||     
T  40780968 aatatcgggttcgattctcaaggggaacaacgcttggtcagtgcgcatgcctctacgcatgagccggattagtcgtccacctttggtgggtcggaaaccg 40780869  T
Q  243 gtgcgaaa 250  Q
    ||||||||    
T  40780868 gtgcgaaa 40780861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 124 - 250
Target Start/End: Original strand, 47078443 - 47078569
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatc 223  Q
    |||||||| ||||| | |||||||||| |||||||  ||| |||||||||| |||| |||||  ||||||||||| ||||||||| ||||||||  || |    
T  47078443 tccaaggacgtacccggggaataccgggttcgattcccagggggaacaacgcttggccagtgcacatgcctctacgcacgagccggattagtcgctcacc 47078542  T
Q  224 tatggtgggtcggaaaccagtgcgaaa 250  Q
      |||||||||||||||||||||||||    
T  47078543 attggtgggtcggaaaccagtgcgaaa 47078569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 141 - 250
Target Start/End: Original strand, 16645120 - 16645229
Alignment:
Q  141 ggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaac 240  Q
    |||||||||| ||||||||||||   |||||||| |||| ||||||||||||||||||||| ||| |  |||||||| ||| || |||||||||||||||    
T  16645120 ggaataccgggttcgattttcaggaagaacaacgcttggccagtgtgcatgcctctacacatgagtctgattagtcgcccacctgtggtgggtcggaaac 16645219  T
Q  241 cagtgcgaaa 250  Q
    | ||||||||    
T  16645220 cggtgcgaaa 16645229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 143 - 246
Target Start/End: Complemental strand, 48317382 - 48317279
Alignment:
Q  143 aataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaacca 242  Q
    ||||| |||||||||||||||  ||||||||| |||||||||||| |||||||||| ||||||||| |||||||| ||| |  || ||||| ||||||||    
T  48317382 aatactggattcgattttcaggaggaacaacgcttggtcagtgtgtatgcctctacgcacgagccggattagtcgcccaccgttgatgggttggaaacca 48317283  T
Q  243 gtgc 246  Q
    ||||    
T  48317282 gtgc 48317279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 124 - 250
Target Start/End: Complemental strand, 7246772 - 7246646
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatc 223  Q
    |||||||| ||||| | ||||||| || |||||||   || |||||||||| |||| ||||| |||||||||||| || |||||| |||||||| ||| |    
T  7246772 tccaaggacgtacccggggaatactgggttcgattcctagtgggaacaacgcttggccagtgcgcatgcctctacgcatgagccggattagtcgcccacc 7246673  T
Q  224 tatggtgggtcggaaaccagtgcgaaa 250  Q
    | |||||||||||||||| ||||||||    
T  7246672 tttggtgggtcggaaaccggtgcgaaa 7246646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 124 - 250
Target Start/End: Complemental strand, 36145341 - 36145215
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatc 223  Q
    |||||||| ||||| | |||||||||| |||||||  ||| || ||||||| ||| |||||| ||||||||||||||| |||||| |||||||||||| |    
T  36145341 tccaaggacgtacccggggaataccgggttcgattcccaggggaaacaacgcttgatcagtgcgcatgcctctacacatgagccggattagtcgtccacc 36145242  T
Q  224 tatggtgggtcggaaaccagtgcgaaa 250  Q
    | || ||  ||||||||| ||||||||    
T  36145241 tttgatgaatcggaaaccggtgcgaaa 36145215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 124 - 250
Target Start/End: Original strand, 52950067 - 52950193
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatc 223  Q
    |||||||| ||||||| |||||| ||| |||||||  ||| |||||||||| |||| ||||| ||||| ||||||||| || ||  |||||||||||| |    
T  52950067 tccaaggacgtacctggggaatatcgggttcgattcccagggggaacaacgcttggccagtgcgcatgactctacacatgaaccagattagtcgtccacc 52950166  T
Q  224 tatggtgggtcggaaaccagtgcgaaa 250  Q
    | ||||||||||||||||  |||||||    
T  52950167 tttggtgggtcggaaaccgatgcgaaa 52950193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 152 - 241
Target Start/End: Original strand, 30317246 - 30317335
Alignment:
Q  152 ttcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaacc 241  Q
    ||||||| ||||||||||||||| |||| ||||  | |||||||||| |||||||||||||||||| ||| || ||||||||||||||||    
T  30317246 ttcgattctcagagggaacaacgcttggccagtacgaatgcctctacgcacgagccgaattagtcgcccacctttggtgggtcggaaacc 30317335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 142 - 250
Target Start/End: Original strand, 38075436 - 38075544
Alignment:
Q  142 gaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaacc 241  Q
    ||||||||| ||||||| |||| || ||||||| |||| ||||| |||||||||||| || ||||||||||| | ||||| || ||||||||||||||||    
T  38075436 gaataccgggttcgattctcaggggaaacaacgcttggccagtgcgcatgcctctacgcatgagccgaattaattgtccacctttggtgggtcggaaacc 38075535  T
Q  242 agtgcgaaa 250  Q
      |||||||    
T  38075536 gatgcgaaa 38075544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 126 - 240
Target Start/End: Original strand, 4736584 - 4736698
Alignment:
Q  126 caaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatcta 225  Q
    |||||||||||| | |||||||||| ||| ||| |||| || ||||||| |||| || |||||||||||||||  || |||||||||||||| ||| |      
T  4736584 caaggatgtacccgaggaataccgggttcaattctcagtggaaacaacgtttggccaatgtgcatgcctctacgtacaagccgaattagtcgcccaccgt 4736683  T
Q  226 tggtgggtcggaaac 240  Q
    |||||||||||||||    
T  4736684 tggtgggtcggaaac 4736698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 124 - 250
Target Start/End: Original strand, 29895772 - 29895898
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatc 223  Q
    |||||||| ||| | | |||||||||| |||||||  ||| |||||||||  |||| ||||| |||||||||||| || |||||| |||||||||||| |    
T  29895772 tccaaggacgtatccggggaataccgggttcgattcccagggggaacaacacttggccagtgcgcatgcctctacgcatgagccggattagtcgtccacc 29895871  T
Q  224 tatggtgggtcggaaaccagtgcgaaa 250  Q
      |||||| ||||||||| ||||||||    
T  29895872 attggtggttcggaaaccggtgcgaaa 29895898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 124 - 250
Target Start/End: Original strand, 38166012 - 38166138
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatc 223  Q
    |||||||| ||| | | ||||||| || || ||||  ||| |||||||||| |||| ||||| ||||| |||||| ||||||||| |||||||| ||| |    
T  38166012 tccaaggacgtatccggggaatactgggttggattcccagggggaacaacgcttggccagtgcgcatggctctacgcacgagccggattagtcgcccacc 38166111  T
Q  224 tatggtgggtcggaaaccagtgcgaaa 250  Q
    | |||||||||||||||| ||||||||    
T  38166112 tttggtgggtcggaaaccggtgcgaaa 38166138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 141 - 249
Target Start/End: Original strand, 21429303 - 21429411
Alignment:
Q  141 ggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaac 240  Q
    |||||| ||| ||||||||| || |||||||||| || | ||||| |||||||||||| |||||| |  | |||||||||| || |||||||||||||||    
T  21429303 ggaatatcgggttcgatttttagggggaacaacgtttagccagtgcgcatgcctctacgcacgagtcagactagtcgtccacctttggtgggtcggaaac 21429402  T
Q  241 cagtgcgaa 249  Q
    | |||||||    
T  21429403 cggtgcgaa 21429411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 164 - 247
Target Start/End: Original strand, 3507295 - 3507378
Alignment:
Q  164 agggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaaccagtgcg 247  Q
    ||||||||||| ||||  |||| || ||||||||||||||||||| |||||||||||| || |||||| |||||||| ||||||    
T  3507295 agggaacaacgcttggctagtgcgcgtgcctctacacacgagccggattagtcgtccacctttggtggatcggaaactagtgcg 3507378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 124 - 239
Target Start/End: Complemental strand, 49260791 - 49260676
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatc 223  Q
    |||||||||||| | | ||||||| | |||| |||  ||  |||||||||| |||| ||||| |||||||||||| ||||||||| |||||||| ||| |    
T  49260791 tccaaggatgtatccggggaatactgaattcaattcccaaggggaacaacgcttggccagtgcgcatgcctctacgcacgagccggattagtcgaccacc 49260692  T
Q  224 tatggtgggtcggaaa 239  Q
    | ||||||||||||||    
T  49260691 tttggtgggtcggaaa 49260676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 152 - 250
Target Start/End: Original strand, 4738631 - 4738729
Alignment:
Q  152 ttcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaaccagtgcgaaa 250  Q
    |||||||| |||  ||||||||| || | ||||| ||||| |||||| || |||| |||||||||||||| || |||||||||||||||| ||||||||    
T  4738631 ttcgatttccaggaggaacaacgctttgccagtgcgcatgtctctacgcatgagctgaattagtcgtccacctttggtgggtcggaaaccggtgcgaaa 4738729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 124 - 250
Target Start/End: Original strand, 14124001 - 14124127
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatc 223  Q
    |||||| | |||| || |||||||| | |||||||  ||| |||||||||  |||| ||||| |||||||||||||||||||||| ||||||||  || |    
T  14124001 tccaagaacgtacttgaggaataccaggttcgattcccagggggaacaacatttggccagtgcgcatgcctctacacacgagccggattagtcgctcacc 14124100  T
Q  224 tatggtgggtcggaaaccagtgcgaaa 250  Q
      |||||||| ||||||| ||||||||    
T  14124101 attggtgggttggaaaccggtgcgaaa 14124127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 124 - 250
Target Start/End: Original strand, 53599045 - 53599171
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatc 223  Q
    |||||||| ||||| | |||||||||| |||||||  |||  ||||||||| |||| ||||| |||||||||||| || |||||| |||| |||| || |    
T  53599045 tccaaggacgtacccggggaataccgggttcgattcccaggaggaacaacgtttggccagtgcgcatgcctctacgcatgagccggattaatcgttcacc 53599144  T
Q  224 tatggtgggtcggaaaccagtgcgaaa 250  Q
    | | |||| ||||||||| ||||||||    
T  53599145 tttagtggatcggaaaccggtgcgaaa 53599171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 124 - 250
Target Start/End: Original strand, 55921019 - 55921145
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatc 223  Q
    |||||||| | ||| | |||||||||| |||||||  ||| |||||||||  |||||||||| ||||||||||||  | |||||| |||| |||  || |    
T  55921019 tccaaggacgcacccggggaataccgggttcgattcccagggggaacaacacttggtcagtgcgcatgcctctacgtatgagccggattaatcgctcacc 55921118  T
Q  224 tatggtgggtcggaaaccagtgcgaaa 250  Q
    | |||||||||||||||| ||||||||    
T  55921119 tttggtgggtcggaaaccggtgcgaaa 55921145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 141 - 250
Target Start/End: Complemental strand, 5472957 - 5472848
Alignment:
Q  141 ggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaac 240  Q
    |||||||| | || |||| |||| || ||||||| |||| ||||| |||||||||||| ||||||||| |||||||| ||| || |||||||||| ||||    
T  5472957 ggaataccaggtttgattctcaggggaaacaacgcttggccagtgcgcatgcctctacgcacgagccggattagtcgcccacctttggtgggtcgaaaac 5472858  T
Q  241 cagtgcgaaa 250  Q
      ||||||||    
T  5472857 tggtgcgaaa 5472848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 142 - 246
Target Start/End: Complemental strand, 3159577 - 3159473
Alignment:
Q  142 gaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaacc 241  Q
    ||||||||| ||||| || ||| |||||||||| |||| ||||| |||||||||||| ||||||||  ||||||||  || |  ||||||||||||||||    
T  3159577 gaataccgggttcgacttccagggggaacaacgcttggccagtgcgcatgcctctacgcacgagccagattagtcgctcaccattggtgggtcggaaacc 3159478  T
Q  242 agtgc 246  Q
     ||||    
T  3159477 ggtgc 3159473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 141 - 241
Target Start/End: Original strand, 8889024 - 8889124
Alignment:
Q  141 ggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaac 240  Q
    |||||||||| |||||||   || |||||||||  |||| ||||| ||||| |||||| || |||||| |||||||||||| || |||||||||||||||    
T  8889024 ggaataccgggttcgattcctagggggaacaacacttgggcagtgcgcatggctctacgcatgagccggattagtcgtccacctttggtgggtcggaaac 8889123  T
Q  241 c 241  Q
    |    
T  8889124 c 8889124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 124 - 250
Target Start/End: Complemental strand, 36262891 - 36262767
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatc 223  Q
    |||||||| ||||| |  ||||||||| |||||||  |||  ||||||||| |||| |||||  ||||||||||| |||||| || |||||||| ||| |    
T  36262891 tccaaggacgtacccggagaataccgggttcgattcccag--ggaacaacgcttggccagtgcacatgcctctacgcacgagtcggattagtcgcccacc 36262794  T
Q  224 tatggtgggtcggaaaccagtgcgaaa 250  Q
    | ||||||||| ||||||| |||||||    
T  36262793 tttggtgggtcagaaaccaatgcgaaa 36262767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 167 - 250
Target Start/End: Complemental strand, 48352592 - 48352509
Alignment:
Q  167 gaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaaccagtgcgaaa 250  Q
    |||||||| |||| |||||  ||||||||  ||||||||||| ||||||||||||||| || || |||||| ||||||||||||    
T  48352592 gaacaacgtttggccagtgcacatgcctcctcacacgagccggattagtcgtccatctttgatgagtcggagaccagtgcgaaa 48352509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 124 - 248
Target Start/End: Complemental strand, 1940900 - 1940779
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatc 223  Q
    |||||||| ||||| | | |||| ||| |||||||  ||| |||||||||| ||||   ||| |||||||||||| ||||||||| |||||||| ||| |    
T  1940900 tccaaggacgtacccgggaaatatcgggttcgattcccagggggaacaacgcttgg---gtgcgcatgcctctacgcacgagccggattagtcgcccacc 1940804  T
Q  224 tatggtgggtcggaaaccagtgcga 248  Q
    | |||||||||| ||||| ||||||    
T  1940803 tttggtgggtcgaaaaccggtgcga 1940779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 152 - 250
Target Start/End: Original strand, 16450313 - 16450411
Alignment:
Q  152 ttcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaaccagtgcgaaa 250  Q
    |||||||  ||| |||||||||| |||| |||||  ||||||||||| || |||||  |||||||||||| || |||| ||||||||||| ||||||||    
T  16450313 ttcgattcccagggggaacaacgcttggccagtgcacatgcctctacgcatgagccagattagtcgtccacctttggtaggtcggaaaccggtgcgaaa 16450411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 124 - 250
Target Start/End: Original strand, 20128294 - 20128420
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatc 223  Q
    |||||||| ||| | | ||||||| || ||||||| |||| |||||||| | |||| ||||| |||||||| ||| |||||||   |||||||||||| |    
T  20128294 tccaaggacgtatccggggaatactgggttcgattctcagggggaacaatgcttggccagtgcgcatgcctttacgcacgagctagattagtcgtccacc 20128393  T
Q  224 tatggtgggtcggaaaccagtgcgaaa 250  Q
      ||||||||| |||||| ||||||||    
T  20128394 attggtgggtcagaaaccggtgcgaaa 20128420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 152 - 250
Target Start/End: Original strand, 20421786 - 20421884
Alignment:
Q  152 ttcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaaccagtgcgaaa 250  Q
    |||||||| ||| |||||||||  |||| ||||| |||||||||||| || |||||  |||| |||||||||  || |||||||||||||||| |||||    
T  20421786 ttcgatttccagggggaacaacacttggccagtgcgcatgcctctacgcatgagccagattaatcgtccatcattgatgggtcggaaaccagttcgaaa 20421884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 124 - 250
Target Start/End: Complemental strand, 42722703 - 42722577
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatc 223  Q
    |||||||| ||||| | | |||||||| ||| |||  |||  ||||||||| |||| ||||| |||||||||||| || |||||| ||||||||| || |    
T  42722703 tccaaggacgtacccgggaaataccgggttcaattcccaggaggaacaacgcttggccagtgcgcatgcctctacgcatgagccggattagtcgttcacc 42722604  T
Q  224 tatggtgggtcggaaaccagtgcgaaa 250  Q
    | | |||||||| ||||| ||||||||    
T  42722603 tttagtgggtcgaaaaccggtgcgaaa 42722577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 124 - 250
Target Start/End: Original strand, 43458598 - 43458724
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatc 223  Q
    |||||||| |||  || ||||||| ||||||||||  |||  |||| |||| |||| ||||| ||||||||||||  |||||||| |||||||||||| |    
T  43458598 tccaaggacgtatttggggaatactggattcgattcccaggaggaagaacgcttggccagtgcgcatgcctctacggacgagccggattagtcgtccacc 43458697  T
Q  224 tatggtgggtcggaaaccagtgcgaaa 250  Q
    | || || ||||||||||  |||||||    
T  43458698 tttgatgagtcggaaaccgttgcgaaa 43458724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 124 - 221
Target Start/End: Original strand, 1446811 - 1446908
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtcca 221  Q
    |||||||| ||| | | |||||||||| |||||||  ||| |||||||||  |||| ||||| |||||||||||| || |||||| ||||||||||||    
T  1446811 tccaaggacgtatccggggaataccgggttcgattcccagggggaacaacacttggccagtgcgcatgcctctacgcatgagccggattagtcgtcca 1446908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 141 - 250
Target Start/End: Original strand, 10541018 - 10541126
Alignment:
Q  141 ggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaac 240  Q
    |||||| ||| |||||||| ||| || ||||||| |||| |||||||||||||||||| ||||||||  |||| ||| ||| || || ||| ||||||||    
T  10541018 ggaatatcgggttcgatttccaggggaaacaacgcttggccagtgtgcatgcctctacgcacgagccagattaatcg-ccacctttgatggatcggaaac 10541116  T
Q  241 cagtgcgaaa 250  Q
    | ||||||||    
T  10541117 cggtgcgaaa 10541126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 141 - 250
Target Start/End: Original strand, 33176016 - 33176125
Alignment:
Q  141 ggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaac 240  Q
    |||||| |||||||||||||||| |||||||||| |||  || |||||||| |  | |||| ||| |  |||||||||||| || ||||| || ||||||    
T  33176016 ggaatatcggattcgattttcagggggaacaacgtttgtccaatgtgcatgtcgattcacatgaggcagattagtcgtccacctttggtgagttggaaac 33176115  T
Q  241 cagtgcgaaa 250  Q
    ||||||||||    
T  33176116 cagtgcgaaa 33176125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 141 - 249
Target Start/End: Complemental strand, 295641 - 295534
Alignment:
Q  141 ggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaac 240  Q
    |||||||| |||||||||  |||||| ||||||| |||| ||||| |||||||||||| ||||| ||  |||||||||||| |  ||||||||  |||||    
T  295641 ggaataccagattcgattcccagagg-aacaacgtttggccagtgcgcatgcctctacgcacgaaccagattagtcgtccaccgttggtgggtttgaaac 295543  T
Q  241 cagtgcgaa 249  Q
    | |||||||    
T  295542 cggtgcgaa 295534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 118 - 230
Target Start/End: Original strand, 6779190 - 6779302
Alignment:
Q  118 gcttcatccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcg 217  Q
    ||||| |||||||| |||||||  ||||||||| |||||||  ||| |||||||||   ||| ||||| |||||||||||  || |||||| ||||||||    
T  6779190 gcttcttccaaggacgtacctggagaataccgggttcgattcccagggggaacaacacctggccagtgcgcatgcctctatgcatgagccggattagtcg 6779289  T
Q  218 tccatctatggtg 230  Q
    |||| || |||||    
T  6779290 tccacctttggtg 6779302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 124 - 250
Target Start/End: Complemental strand, 15840060 - 15839935
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatc 223  Q
    |||||||| |||| || |||||||||| |||||||   ||| | || |||| |||| ||||| |||||||||||| || |||||| |||||||| || ||    
T  15840060 tccaaggacgtacttggggaataccgggttcgattcctagaag-aataacgtttggccagtgcgcatgcctctacgcatgagccggattagtcgcccttc 15839962  T
Q  224 tatggtgggtcggaaaccagtgcgaaa 250  Q
    | || | ||| ||||||||||||||||    
T  15839961 tttgataggttggaaaccagtgcgaaa 15839935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 124 - 250
Target Start/End: Original strand, 43468332 - 43468458
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatc 223  Q
    |||||| | ||||| | |||||||||| |||||||  ||| |||||||||| |||| |||||  |||  |||||| || |||||| |||||||| ||| |    
T  43468332 tccaagaacgtacccggggaataccgggttcgattcccagggggaacaacgcttggccagtgcacatttctctacgcatgagccggattagtcgcccacc 43468431  T
Q  224 tatggtgggtcggaaaccagtgcgaaa 250  Q
      |||||||||||| ||| ||||||||    
T  43468432 agtggtgggtcggagaccggtgcgaaa 43468458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 193 - 250
Target Start/End: Complemental strand, 2686512 - 2686455
Alignment:
Q  193 ctctacacacgagccgaattagtcgtccatctatggtgggtcggaaaccagtgcgaaa 250  Q
    ||||||||| ||||||||||||||||||| || | |||||| ||||||| ||||||||    
T  2686512 ctctacacatgagccgaattagtcgtccaccttttgtgggttggaaaccggtgcgaaa 2686455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 239
Target Start/End: Complemental strand, 20532517 - 20532420
Alignment:
Q  142 gaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaa 239  Q
    ||||||||  |||||||| |||  ||||||||| |||| ||||| |||||||||||| || |||||| || ||||| ||| || |||||| |||||||    
T  20532517 gaataccgagttcgatttccaggaggaacaacgcttggccagtgcgcatgcctctacgcatgagccggataagtcgcccacctttggtggatcggaaa 20532420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 165 - 250
Target Start/End: Complemental strand, 47682467 - 47682382
Alignment:
Q  165 gggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaaccagtgcgaaa 250  Q
    ||||| |||| |||| |||||  |||| |||||| |||||||||  ||||||| ||| || |||||||||||||||| ||||||||    
T  47682467 gggaataacgtttggccagtgcacatgtctctacgcacgagccgggttagtcgcccacctttggtgggtcggaaaccggtgcgaaa 47682382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 241
Target Start/End: Original strand, 54946286 - 54946351
Alignment:
Q  176 ttggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaacc 241  Q
    |||||||||  |||||||||||| || |||||| |||||||| |||||  ||||||||||||||||    
T  54946286 ttggtcagtccgcatgcctctacgcatgagccggattagtcgcccatcattggtgggtcggaaacc 54946351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 239
Target Start/End: Complemental strand, 41162989 - 41162893
Alignment:
Q  143 aataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaa 239  Q
    |||||||  |||||||| |||||||||||||  |||| |||||| ||||| ||||  || ||||||||||||||| ||| || || ||| |||||||    
T  41162989 aataccgagttcgatttccagagggaacaacacttggccagtgtacatgcttctatgcatgagccgaattagtcgcccacctttgatggatcggaaa 41162893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 188 - 250
Target Start/End: Complemental strand, 6032705 - 6032643
Alignment:
Q  188 catgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaaccagtgcgaaa 250  Q
    |||||||||||  | |||||| |||||||||| | || |||||||||||||||| ||||||||    
T  6032705 catgcctctacgaatgagccggattagtcgtctacctttggtgggtcggaaaccggtgcgaaa 6032643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 250
Target Start/End: Original strand, 13073523 - 13073649
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatc 223  Q
    |||||||| |||||||  ||||||||  |||||||  ||  |||||||| | |||| ||||| |||| ||||||| || || ||  |||||||||  | |    
T  13073523 tccaaggacgtacctggagaataccgagttcgattcccatggggaacaatgtttggccagtgcgcatacctctacgcatgaaccagattagtcgtttacc 13073622  T
Q  224 tatggtgggtcggaaaccagtgcgaaa 250  Q
    | |||||||||||||||| ||||||||    
T  13073623 tttggtgggtcggaaaccggtgcgaaa 13073649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 250
Target Start/End: Original strand, 14567276 - 14567350
Alignment:
Q  176 ttggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaaccagtgcgaaa 250  Q
    |||| ||||| |||||||||||| ||||||||| ||||||||  |  || |||||||||||||| | ||||||||    
T  14567276 ttggccagtgcgcatgcctctacgcacgagccggattagtcgctcgcctttggtgggtcggaaatcggtgcgaaa 14567350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 250
Target Start/End: Original strand, 14859300 - 14859402
Alignment:
Q  148 cggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaaccagtgcg 247  Q
    ||||||||||||||||  ||||||| | |||  ||||| ||||| |||||| ||||||||  ||||||| |||| || || || |||||||||  |||||    
T  14859300 cggattcgattttcaggaggaacaatgtttgaccagtgcgcatgtctctacgcacgagccagattagtcatccacctttgatgtgtcggaaactggtgcg 14859399  T
Q  248 aaa 250  Q
    |||    
T  14859400 aaa 14859402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 250
Target Start/End: Original strand, 24166479 - 24166561
Alignment:
Q  168 aacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaaccagtgcgaaa 250  Q
    ||||||| |||| ||||| |||||||||||| ||||||||  |||||||  ||| || || ||| ||||||||| ||||||||    
T  24166479 aacaacgtttggccagtgcgcatgcctctacgcacgagccagattagtcacccacctttgatggatcggaaaccggtgcgaaa 24166561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 241
Target Start/End: Original strand, 50485971 - 50486045
Alignment:
Q  167 gaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaacc 241  Q
    ||||||||||||| |||   |||||||||||| ||||||||| |||||||| ||| |  | ||||||||||||||    
T  50485971 gaacaacgattggccagaacgcatgcctctacgcacgagccggattagtcgcccaccattagtgggtcggaaacc 50486045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 165 - 250
Target Start/End: Original strand, 17080069 - 17080154
Alignment:
Q  165 gggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaaccagtgcgaaa 250  Q
    |||||||||| |||| ||||| |||||||||||| || |||||| ||||||||  || || || ||| ||| ||||| ||||||||    
T  17080069 gggaacaacgcttggccagtgcgcatgcctctacgcatgagccggattagtcgcacacctttgatggatcgaaaaccggtgcgaaa 17080154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 165 - 250
Target Start/End: Original strand, 18531545 - 18531630
Alignment:
Q  165 gggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaaccagtgcgaaa 250  Q
    |||||||||  |||||||||| ||||||||| |  ||||| ||  |||| ||||||| || | |||||||||||||| ||||||||    
T  18531545 gggaacaacacttggtcagtgcgcatgcctccatgcacgaaccagattattcgtccaccttttgtgggtcggaaaccggtgcgaaa 18531630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 124 - 241
Target Start/End: Complemental strand, 40272457 - 40272340
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatc 223  Q
    ||||| |||||| | | |||||| ||| |||||||| ||  |||||||||| |||| ||||| |||||||||||| ||  || || ||| ||||| || |    
T  40272457 tccaatgatgtatccggggaatatcgggttcgatttccatggggaacaacgcttggccagtgcgcatgcctctacgcataagtcggatttgtcgttcacc 40272358  T
Q  224 tatggtgggtcggaaacc 241  Q
      ||||||||||||||||    
T  40272357 attggtgggtcggaaacc 40272340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 235
Target Start/End: Original strand, 8424582 - 8424650
Alignment:
Q  167 gaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcg 235  Q
    |||||||| |||| ||||| |||||||||||  |||||||| ||||| |||  ||||| ||||||||||    
T  8424582 gaacaacgtttggccagtgcgcatgcctctatgcacgagccaaattaatcgctcatctttggtgggtcg 8424650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 185
Target Start/End: Original strand, 13436814 - 13436858
Alignment:
Q  141 ggaataccggattcgattttcagagggaacaacgattggtcagtg 185  Q
    |||||||||| |||||||  |||||||||||||| ||||||||||    
T  13436814 ggaataccgggttcgattcccagagggaacaacgcttggtcagtg 13436858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 236
Target Start/End: Original strand, 23788426 - 23788494
Alignment:
Q  168 aacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcgg 236  Q
    ||||||| || ||||||| |||||||||||| ||||||| | ||||||||| ||| | || ||||||||    
T  23788426 aacaacgtttagtcagtgcgcatgcctctacgcacgagctggattagtcgttcatttttgatgggtcgg 23788494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 239
Target Start/End: Original strand, 29588740 - 29588836
Alignment:
Q  143 aataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaa 239  Q
    |||||||| |||||||  ||| || ||||| | ||||  |||| |||||||||||| ||||||||| ||||||  |||| |  ||||||||||||||    
T  29588740 aataccgggttcgattcccaggggaaacaaagcttggctagtgcgcatgcctctacgcacgagccggattagttatccaccattggtgggtcggaaa 29588836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 250
Target Start/End: Original strand, 38168284 - 38168367
Alignment:
Q  166 ggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaaccagtgcgaaa 250  Q
    ||||||||| |||| |||||  ||||||||||| || |||||| ||||||||| || || | |||||| ||||||| ||||||||    
T  38168284 ggaacaacgcttggccagtgc-catgcctctacgcatgagccggattagtcgttcacctttagtgggttggaaaccggtgcgaaa 38168367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 246
Target Start/End: Original strand, 54524935 - 54525038
Alignment:
Q  142 gaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaacc 241  Q
    ||||||| |||||||||  |||||||||||||| ||   |||||| |||||||| ||||| || || |||| |||||||| || || || |||||||| |    
T  54524935 gaataccagattcgattcccagagggaacaacgctttaccagtgtacatgcctc-acacatgatcctaatttgtcgtccacctttgatgagtcggaaatc 54525033  T
Q  242 agtgc 246  Q
    |||||    
T  54525034 agtgc 54525038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 62; Significance: 7e-27; HSPs: 56)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 141 - 246
Target Start/End: Complemental strand, 40288587 - 40288482
Alignment:
Q  141 ggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaac 240  Q
    |||||||||| |||||||| ||| |||||||||| |||| |||| ||||||||||||||||||||||| ||||||||  ||||  |||||||||||||||    
T  40288587 ggaataccgggttcgatttccagggggaacaacggttggccagtatgcatgcctctacacacgagccggattagtcgctcatccttggtgggtcggaaac 40288488  T
Q  241 cagtgc 246  Q
    ||||||    
T  40288487 cagtgc 40288482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 124 - 246
Target Start/End: Complemental strand, 30927854 - 30927732
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatc 223  Q
    |||||||| ||||||| | |||| ||| |||||||| |||||||||||||| |||| || ||||||||||||||| || |||||| ||||||||||||      
T  30927854 tccaaggacgtacctgggaaatatcgggttcgatttccagagggaacaacgcttggccaatgtgcatgcctctacgcatgagccggattagtcgtccact 30927755  T
Q  224 tatggtgggtcggaaaccagtgc 246  Q
    | ||||||||| |||||| ||||    
T  30927754 tttggtgggtcagaaaccggtgc 30927732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 118 - 250
Target Start/End: Original strand, 18915842 - 18915974
Alignment:
Q  118 gcttcatccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcg 217  Q
    ||||| |||||||| ||||| | |||||||||| |||||||  ||| |||||||||  |||| |||||||||||||||||| ||||||||| ||||||||    
T  18915842 gcttcttccaaggacgtacccggggaataccgggttcgattcccagggggaacaacacttggccagtgtgcatgcctctacgcacgagccggattagtcg 18915941  T
Q  218 tccatctatggtgggtcggaaaccagtgcgaaa 250  Q
      || |  |||||||| ||||||| ||||||||    
T  18915942 ctcaccattggtgggttggaaaccggtgcgaaa 18915974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 124 - 250
Target Start/End: Original strand, 8763972 - 8764098
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatc 223  Q
    |||||||| ||||| | |||||| ||| |||| ||  ||| |||||||||  |||| ||||| |||||||||||| ||||||||| |||||||||||| |    
T  8763972 tccaaggacgtacccggggaatatcgggttcgtttcccagggggaacaacacttggccagtgcgcatgcctctacgcacgagccggattagtcgtccacc 8764071  T
Q  224 tatggtgggtcggaaaccagtgcgaaa 250  Q
      |||||||||||||||| ||||||||    
T  8764072 gttggtgggtcggaaaccggtgcgaaa 8764098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 141 - 250
Target Start/End: Original strand, 26325810 - 26325919
Alignment:
Q  141 ggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaac 240  Q
    |||||| ||| |||||||  ||| |||||||||  |||||||||| |||||||||||| || |||||| |||||||||||| |  |||||||||||||||    
T  26325810 ggaatatcgggttcgattcccagcgggaacaacacttggtcagtgcgcatgcctctacgcatgagccggattagtcgtccaccattggtgggtcggaaac 26325909  T
Q  241 cagtgcgaaa 250  Q
    | ||||||||    
T  26325910 cggtgcgaaa 26325919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 141 - 250
Target Start/End: Complemental strand, 41663966 - 41663857
Alignment:
Q  141 ggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaac 240  Q
    |||||||||| |||||||  ||| |||||||||  |||||||||| |||||||||||| || |||| | |||||||||||| |  |||||||||||||||    
T  41663966 ggaataccgggttcgattcccagggggaacaacacttggtcagtgcgcatgcctctacgcatgagctggattagtcgtccaccattggtgggtcggaaac 41663867  T
Q  241 cagtgcgaaa 250  Q
    | ||||||||    
T  41663866 cggtgcgaaa 41663857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 152 - 248
Target Start/End: Complemental strand, 17092576 - 17092480
Alignment:
Q  152 ttcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaaccagtgcga 248  Q
    |||||||||||| || |||||||||||| ||||||| |||||||||| ||||||||| |||||||||||| || |||| | || |||||| ||||||    
T  17092576 ttcgattttcaggggaaacaacgattggccagtgtgtatgcctctacgcacgagccggattagtcgtccacctttggtagatcagaaaccggtgcga 17092480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 143 - 250
Target Start/End: Complemental strand, 17642112 - 17642005
Alignment:
Q  143 aataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaacca 242  Q
    ||||| || |||||||  ||| |||||||||  |||| ||||| |||||||||||| ||||||||| |||||||||||| || |||||||||||||||      
T  17642112 aatactgggttcgattcccagggggaacaacacttggccagtgcgcatgcctctacgcacgagccggattagtcgtccacctttggtgggtcggaaactg 17642013  T
Q  243 gtgcgaaa 250  Q
    ||||||||    
T  17642012 gtgcgaaa 17642005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 124 - 250
Target Start/End: Original strand, 37339800 - 37339927
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttca-gagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccat 222  Q
    |||||||||||||| | |||||||||| |||||||  || | ||| |||||| |||| ||||| ||||||||| || ||||||||| |||||||| |||     
T  37339800 tccaaggatgtacccggggaataccgggttcgattcccagggggggacaacgcttggccagtgcgcatgcctcaacgcacgagccggattagtcgcccac 37339899  T
Q  223 ctatggtgggtcggaaaccagtgcgaaa 250  Q
    || |||||||| ||||||| ||||||||    
T  37339900 ctttggtgggttggaaaccggtgcgaaa 37339927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 124 - 250
Target Start/End: Original strand, 16956447 - 16956573
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatc 223  Q
    |||||||| ||||| | |||||||||  |||| || |||| || ||||||| |||  ||||| |||||||||||| ||||||||| |||||||   || |    
T  16956447 tccaaggacgtacccggggaataccgtgttcggttctcaggggtaacaacgtttgaccagtgcgcatgcctctacgcacgagccggattagtcactcacc 16956546  T
Q  224 tatggtgggtcggaaaccagtgcgaaa 250  Q
    | |||||||||||||||||||||||||    
T  16956547 tttggtgggtcggaaaccagtgcgaaa 16956573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 124 - 230
Target Start/End: Original strand, 31152697 - 31152803
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatc 223  Q
    ||||||||||||||   |||||||||| |||||||| | | ||||| |||| |||||||||| || |||||||||||||||| | ||||||||||||| |    
T  31152697 tccaaggatgtacccagggaataccgggttcgatttcccgggggaataacgcttggtcagtgcgcgtgcctctacacacgagtcaaattagtcgtccacc 31152796  T
Q  224 tatggtg 230  Q
    | |||||    
T  31152797 tttggtg 31152803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 140 - 250
Target Start/End: Complemental strand, 32142957 - 32142847
Alignment:
Q  140 tggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaa 239  Q
    ||||||||||| |||||||||||| |||||||||  |||| ||||| |||||||| ||| || |||||||||||||||  || || || |||||||||||    
T  32142957 tggaataccgggttcgattttcagggggaacaacacttggccagtgcgcatgcctttacgcatgagccgaattagtcgctcacctttgatgggtcggaaa 32142858  T
Q  240 ccagtgcgaaa 250  Q
    ||  |||||||    
T  32142857 ccgatgcgaaa 32142847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 124 - 250
Target Start/End: Complemental strand, 33004142 - 33004016
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatc 223  Q
    |||||||| ||| | | |||||| |||||||||||| ||| || ||||| | |||| ||||| |||||||||||| ||||||||| |||||||  ||| |    
T  33004142 tccaaggacgtatccggggaatatcggattcgatttccaggggaaacaatgcttggccagtgcgcatgcctctacgcacgagccggattagtcacccacc 33004043  T
Q  224 tatggtgggtcggaaaccagtgcgaaa 250  Q
     ||||||||||| ||||| ||||||||    
T  33004042 aatggtgggtcgaaaaccggtgcgaaa 33004016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 141 - 250
Target Start/End: Complemental strand, 2981041 - 2980932
Alignment:
Q  141 ggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaac 240  Q
    ||||||| || |||||||  ||| |||||||||  |||| |||||||||||||||||| |||||| || ||||||||||||| | | ||||||||||||     
T  2981041 ggaatactgggttcgattcccagcgggaacaacacttggccagtgtgcatgcctctacgcacgagtcggattagtcgtccatgtttagtgggtcggaaat 2980942  T
Q  241 cagtgcgaaa 250  Q
    | ||||||||    
T  2980941 cggtgcgaaa 2980932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 141 - 242
Target Start/End: Complemental strand, 14254378 - 14254277
Alignment:
Q  141 ggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaac 240  Q
    |||||||||  |||||||||||| |||||||||| |||| ||||  |||||||| ||| || |||||| |||||||||||| || || ||||||||||||    
T  14254378 ggaataccgagttcgattttcagggggaacaacgcttggccagtacgcatgcctttacgcatgagccggattagtcgtccacctttgatgggtcggaaac 14254279  T
Q  241 ca 242  Q
    ||    
T  14254278 ca 14254277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 142 - 243
Target Start/End: Complemental strand, 33418224 - 33418123
Alignment:
Q  142 gaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaacc 241  Q
    |||||||||||||||||   || ||| |||||| |||| ||||| |||||||||||  ||||||||| |||||||||||| || |||| |||||||||||    
T  33418224 gaataccggattcgattcctaggggggacaacgcttggccagtgcgcatgcctctatgcacgagccggattagtcgtccacctttggtcggtcggaaacc 33418125  T
Q  242 ag 243  Q
    ||    
T  33418124 ag 33418123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 142 - 250
Target Start/End: Original strand, 2567275 - 2567383
Alignment:
Q  142 gaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaacc 241  Q
    ||||||||| |||||||||| | |  ||||||| |||| ||||| |||||||||||| |||||| |  ||||| ||||||||| ||||||||||||||||    
T  2567275 gaataccgggttcgattttcggggaaaacaacgcttggccagtgcgcatgcctctactcacgagtcagattagccgtccatctttggtgggtcggaaacc 2567374  T
Q  242 agtgcgaaa 250  Q
     || |||||    
T  2567375 ggtacgaaa 2567383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 143 - 239
Target Start/End: Original strand, 48761176 - 48761272
Alignment:
Q  143 aataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaa 239  Q
    ||||| ||||||||||||||   ||||||||| ||||||||||  ||||||||||| ||||||| | |||||||||||| || |||| |||||||||    
T  48761176 aatactggattcgattttcaagaggaacaacgtttggtcagtggacatgcctctacgcacgagctggattagtcgtccacctttggtcggtcggaaa 48761272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 176 - 250
Target Start/End: Complemental strand, 4581757 - 4581683
Alignment:
Q  176 ttggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaaccagtgcgaaa 250  Q
    |||| ||||| |||||||||||| ||||||||| | |||||||||| || |||||||||||||||| ||||||||    
T  4581757 ttggccagtgcgcatgcctctacgcacgagccggaatagtcgtccacctttggtgggtcggaaaccggtgcgaaa 4581683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 124 - 250
Target Start/End: Complemental strand, 10173098 - 10172972
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatc 223  Q
    |||||||| ||| ||| |||||||||||||| |||  || |  |||||||| |||| |||||  ||||||||||| || |||||| |||| ||| ||| |    
T  10173098 tccaaggacgtatctggggaataccggattcaattcccataaagaacaacgcttggccagtgcccatgcctctacgcatgagccggattactcgcccacc 10172999  T
Q  224 tatggtgggtcggaaaccagtgcgaaa 250  Q
    | |||||||||||||||| ||||||||    
T  10172998 tttggtgggtcggaaaccggtgcgaaa 10172972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 141 - 246
Target Start/End: Original strand, 35908755 - 35908859
Alignment:
Q  141 ggaataccggattcgattttcagagggaacaacgatt-ggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaa 239  Q
    |||||||||||||||||||| || |||||||||  || |||||||| |||||||||||| || |||||| |||||||||||| | || ||||||||||||    
T  35908755 ggaataccggattcgatttttagggggaacaacactttggtcagtgcgcatgcctctacgcatgagccggattagtcgtcca-ccat-gtgggtcggaaa 35908852  T
Q  240 ccagtgc 246  Q
    || ||||    
T  35908853 ccggtgc 35908859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 124 - 250
Target Start/End: Complemental strand, 43959948 - 43959822
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatc 223  Q
    ||||| || ||||| | |||||| ||| ||| |||  ||| |||||||||| |||| ||||| |||||||||||| ||||||||| |||||||| ||| |    
T  43959948 tccaatgacgtacccggggaatatcgggttcaattcccagggggaacaacgcttggccagtgcgcatgcctctacgcacgagccggattagtcgcccacc 43959849  T
Q  224 tatggtgggtcggaaaccagtgcgaaa 250  Q
    | | |||| ||||||||| ||||||||    
T  43959848 tttagtggatcggaaaccggtgcgaaa 43959822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 124 - 250
Target Start/End: Complemental strand, 45362009 - 45361883
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatc 223  Q
    |||||||| |||||   |||||||||| ||||||| ||||  ||||||||| |||| ||||| ||||||| |||| ||  ||||| ||||||||| || |    
T  45362009 tccaaggacgtaccctgggaataccgggttcgattctcaggaggaacaacgcttggccagtgcgcatgccactacgcataagccggattagtcgttcacc 45361910  T
Q  224 tatggtgggtcggaaaccagtgcgaaa 250  Q
    | | |||||||||||||| ||||||||    
T  45361909 tttagtgggtcggaaaccggtgcgaaa 45361883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 141 - 250
Target Start/End: Original strand, 10422786 - 10422895
Alignment:
Q  141 ggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaac 240  Q
    |||||||||| ||||||||  ||  ||||||||  |||| ||||| |||||||||||| || |||||| |||||||||||| || ||||  |||||||||    
T  10422786 ggaataccgggttcgatttctaggaggaacaacacttggccagtgcgcatgcctctacgcatgagccggattagtcgtccacctttggtaagtcggaaac 10422885  T
Q  241 cagtgcgaaa 250  Q
    | ||||||||    
T  10422886 cggtgcgaaa 10422895  T

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Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 141 - 250
Target Start/End: Original strand, 26660136 - 26660244
Alignment:
Q  141 ggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaac 240  Q
    |||||||||| |||||||| ||  |||||||||  ||| |||||  |||||||||||| || |||||| |||||||| ||| || |||||||||||||||    
T  26660136 ggaataccgggttcgatttccacggggaacaacatttgatcagtacgcatgcctctacgcatgagccggattagtcg-ccacctttggtgggtcggaaac 26660234  T
Q  241 cagtgcgaaa 250  Q
    | ||||||||    
T  26660235 cggtgcgaaa 26660244  T

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Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 124 - 221
Target Start/End: Original strand, 31734270 - 31734366
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtcca 221  Q
    |||||||||||||| | ||||||| |||||||||| | || || |||||||||||| ||||| ||||||||||||  ||||||| ||||| |||||||    
T  31734270 tccaaggatgtacccgaggaatactggattcgattct-aggggaaacaacgattggccagtgcgcatgcctctacgtacgagccaaattaatcgtcca 31734366  T

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Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 166 - 242
Target Start/End: Original strand, 10507721 - 10507797
Alignment:
Q  166 ggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaacca 242  Q
    ||||||||| |||| |||||||||| ||||||| || |||||| |||||||||||| |  |||||||||||||||||    
T  10507721 ggaacaacgtttggccagtgtgcatacctctacgcatgagccggattagtcgtccaccactggtgggtcggaaacca 10507797  T

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Target: chr1; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 167 - 250
Target Start/End: Original strand, 44969688 - 44969771
Alignment:
Q  167 gaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaaccagtgcgaaa 250  Q
    |||||||| |||| ||||||||||||| |||| || |||||| ||||||||||||||  |||||| ||||||||| ||| ||||    
T  44969688 gaacaacgcttggccagtgtgcatgcccctacgcatgagccggattagtcgtccatcattggtggatcggaaaccggtgtgaaa 44969771  T

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Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 127 - 221
Target Start/End: Complemental strand, 33498963 - 33498869
Alignment:
Q  127 aaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtcca 221  Q
    |||||||||||||   |||||||| ||||||| ||||  ||| ||||| |||| ||||| |||||||||||| || |||||| ||||||||||||    
T  33498963 aaggatgtacctggaaaataccgggttcgattctcaggaggagcaacgcttggccagtgcgcatgcctctacgcatgagccggattagtcgtcca 33498869  T

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Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 152 - 250
Target Start/End: Complemental strand, 50371933 - 50371835
Alignment:
Q  152 ttcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaaccagtgcgaaa 250  Q
    ||||||||||||   |||||||| |||| ||||  |||||| ||||| ||| ||||| |||||||| |||||| |||||| ||||||||| ||||||||    
T  50371933 ttcgattttcaggaagaacaacgcttggccagtacgcatgcttctacgcacaagccggattagtcgcccatctttggtggatcggaaaccggtgcgaaa 50371835  T

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Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 141 - 250
Target Start/End: Original strand, 5855520 - 5855629
Alignment:
Q  141 ggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaac 240  Q
    |||||||||| |||||||  |||  ||||||||| |||| ||||| |||||||||||| || ||| || ||||||||| || || | |||||||||||||    
T  5855520 ggaataccgggttcgattcccaggaggaacaacgcttggccagtgcgcatgcctctacgcatgaggcggattagtcgttcacctttagtgggtcggaaac 5855619  T
Q  241 cagtgcgaaa 250  Q
    |  |||||||    
T  5855620 cgatgcgaaa 5855629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 141 - 250
Target Start/End: Complemental strand, 9659288 - 9659180
Alignment:
Q  141 ggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaac 240  Q
    |||||||||| |||||||  ||| |||||||||| |||   |||| |||||||| ||| || |||||| |||||||||||| || |||||||| ||||||    
T  9659288 ggaataccgggttcgattcccag-gggaacaacgtttgactagtgcgcatgcctttacgcatgagccggattagtcgtccacctttggtgggttggaaac 9659190  T
Q  241 cagtgcgaaa 250  Q
    | ||||||||    
T  9659189 cggtgcgaaa 9659180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 124 - 217
Target Start/End: Complemental strand, 12744650 - 12744557
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcg 217  Q
    |||||||| ||| ||| |||||| | |||||||||||||| |||||||||| |||   |||| ||||| |||||| || |||||||||||||||    
T  12744650 tccaaggacgtatctgaggaatatcagattcgattttcagggggaacaacgcttgactagtgcgcatgtctctacgcatgagccgaattagtcg 12744557  T

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Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 124 - 217
Target Start/End: Complemental strand, 12755640 - 12755547
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcg 217  Q
    |||||||| ||| ||| |||||| | |||||||||||||| |||||||||| |||   |||| ||||| |||||| || |||||||||||||||    
T  12755640 tccaaggacgtatctgaggaatatcagattcgattttcagggggaacaacgcttgactagtgcgcatgtctctacgcatgagccgaattagtcg 12755547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 124 - 221
Target Start/End: Original strand, 13262064 - 13262161
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtcca 221  Q
    ||||||||||||  || |||||||||| |||||||| ||| | |||||||| ||||||| |  ||||| |||||| |||||| || ||||||||||||    
T  13262064 tccaaggatgtatatggggaataccgggttcgatttccagggagaacaacgtttggtcaatacgcatgtctctacgcacgagtcggattagtcgtcca 13262161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 124 - 241
Target Start/End: Original strand, 15465946 - 15466063
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatc 223  Q
    |||||||| |||  || |||||||| | |||||||| ||| |||||||||| ||||||||||  ||||||||||| |||||| |  ||| ||||  || |    
T  15465946 tccaaggacgtatttggggaataccaggttcgatttccagggggaacaacgcttggtcagtgcacatgcctctacgcacgagtctgattggtcgctcacc 15466045  T
Q  224 tatggtgggtcggaaacc 241  Q
    | ||||||||||||||||    
T  15466046 tttggtgggtcggaaacc 15466063  T

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Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 141 - 250
Target Start/End: Original strand, 49078112 - 49078221
Alignment:
Q  141 ggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaac 240  Q
    |||||||||| |||||||  ||| || ||||||  |||| ||||| |||||||||||| || |||||| ||||||||| || |  |||| ||||||||||    
T  49078112 ggaataccgggttcgattcccaggggaaacaacacttggccagtgcgcatgcctctacgcatgagccggattagtcgttcaccattggtaggtcggaaac 49078211  T
Q  241 cagtgcgaaa 250  Q
    | ||||||||    
T  49078212 cggtgcgaaa 49078221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 141 - 250
Target Start/End: Complemental strand, 50503471 - 50503362
Alignment:
Q  141 ggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaac 240  Q
    |||||| ||| |||||||  ||| |||||||||  |||  ||||| |||||||||||| ||||||||| ||| |||| ||| | ||||||||||||||||    
T  50503471 ggaatatcgggttcgattcccagggggaacaacacttgaccagtgcgcatgcctctacgcacgagccggatttgtcgcccaccaatggtgggtcggaaac 50503372  T
Q  241 cagtgcgaaa 250  Q
    |  |||||||    
T  50503371 cgatgcgaaa 50503362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 126 - 250
Target Start/End: Original strand, 16263528 - 16263652
Alignment:
Q  126 caaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatcta 225  Q
    |||||| ||| ||| |||||||| | |||||||| |||  ||||||||| |||| ||||| |||||||||||| ||  ||||| | ||||||||||  |     
T  16263528 caaggacgtatctggggaataccaggttcgatttccaggaggaacaacgcttggccagtgcgcatgcctctacgcataagccggaatagtcgtccacttt 16263627  T
Q  226 tggtgggtcggaaaccagtgcgaaa 250  Q
    || ||| ||||||||| ||||||||    
T  16263628 tgatggatcggaaaccggtgcgaaa 16263652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 168 - 224
Target Start/End: Complemental strand, 38791693 - 38791637
Alignment:
Q  168 aacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatct 224  Q
    ||||||||||||  |||| |||||||||||| || ||||||||||||||||||||||    
T  38791693 aacaacgattggcaagtgcgcatgcctctacgcatgagccgaattagtcgtccatct 38791637  T

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Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 124 - 219
Target Start/End: Original strand, 32852 - 32947
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtc 219  Q
    |||||||| ||||| | |||||| ||| | |||||  |||  ||||||||| ||||||||||  ||||||||||| || |||||||||||||||||    
T  32852 tccaaggacgtaccgggggaatatcgggtccgattcccaggaggaacaacgcttggtcagtgcacatgcctctacgcatgagccgaattagtcgtc 32947  T

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Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 221
Target Start/End: Original strand, 10336515 - 10336594
Alignment:
Q  142 gaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtcca 221  Q
    ||||| ||| |||||||||||| |||||||||| |||  ||||| |||||||||||| || |||||| |||| |||||||    
T  10336515 gaatatcgggttcgattttcagggggaacaacgcttgaccagtgcgcatgcctctacgcatgagccggattaatcgtcca 10336594  T

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Target: chr1; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 187 - 250
Target Start/End: Complemental strand, 35211236 - 35211173
Alignment:
Q  187 gcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaaccagtgcgaaa 250  Q
    |||||||||||| || |||| |||||||||||||| || |||||||||||||||| ||| ||||    
T  35211236 gcatgcctctacgcatgagctgaattagtcgtccacctttggtgggtcggaaaccggtgtgaaa 35211173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 124 - 250
Target Start/End: Complemental strand, 11398015 - 11397890
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatc 223  Q
    |||||||||||| | |  ||||||||| |||||||   || |||||||||| |||| || || | |||||||||| || ||| || |||||||||||| |    
T  11398015 tccaaggatgtatccggagaataccgggttcgattccgag-gggaacaacgtttggccaatgcgtatgcctctacgcatgagtcggattagtcgtccacc 11397917  T
Q  224 tatggtgggtcggaaaccagtgcgaaa 250  Q
    | |||||||||||||| | ||||||||    
T  11397916 tttggtgggtcggaaatcggtgcgaaa 11397890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 165 - 250
Target Start/End: Complemental strand, 12036830 - 12036744
Alignment:
Q  165 gggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcgg-aaaccagtgcgaaa 250  Q
    |||||||| | |||| ||||| |||||||||||| ||||||||  |||| ||||||| || |||||| |||| ||||||||||||||    
T  12036830 gggaacaatgcttggccagtgcgcatgcctctacgcacgagccagattaatcgtccacctttggtggatcggaaaaccagtgcgaaa 12036744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 124 - 250
Target Start/End: Complemental strand, 18649479 - 18649353
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatc 223  Q
    |||||||| ||| |||  ||||| ||| |||||||||||| |||||||||| |||  ||||| ||||||||||||  |||||||  |||| ||| ||| |    
T  18649479 tccaaggacgtatctggagaatatcgggttcgattttcagggggaacaacgcttgaccagtgcgcatgcctctacgtacgagccagattaatcgcccacc 18649380  T
Q  224 tatggtgggtcggaaaccagtgcgaaa 250  Q
    | | |||| | ||||||| ||||||||    
T  18649379 tttagtggattggaaaccggtgcgaaa 18649353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 152 - 250
Target Start/End: Complemental strand, 32151021 - 32150923
Alignment:
Q  152 ttcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaaccagtgcgaaa 250  Q
    |||||||| ||| |||||||||  |||||||||| |||||||| ||| || |||||||||||||||  || || || ||||||| |||||  |||||||    
T  32151021 ttcgatttccagggggaacaacatttggtcagtgcgcatgcctttacgcatgagccgaattagtcgctcacctttgatgggtcgaaaaccgatgcgaaa 32150923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 124 - 250
Target Start/End: Original strand, 34719757 - 34719883
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatc 223  Q
    |||||||| ||||||| ||||||| || |||||||  ||  ||||| |||| |||  ||||| |||||||||||| |||||| |  ||||||||  || |    
T  34719757 tccaaggacgtacctggggaatactgggttcgattcccactgggaataacgcttgaccagtgcgcatgcctctacgcacgagtcagattagtcgctcacc 34719856  T
Q  224 tatggtgggtcggaaaccagtgcgaaa 250  Q
    | |||||||||||||||  ||||||||    
T  34719857 tttggtgggtcggaaactggtgcgaaa 34719883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 143 - 250
Target Start/End: Original strand, 17389772 - 17389878
Alignment:
Q  143 aataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaacca 242  Q
    |||| |||||||||||||| | |||||||| | |||  ||||| ||||||||| || || |||| | |||||||||||||   || |||||||||||||     
T  17389772 aatatcggattcgattttcgg-gggaacaatgtttgaccagtgcgcatgcctccacgcatgagctggattagtcgtccattgctgatgggtcggaaaccg 17389870  T
Q  243 gtgcgaaa 250  Q
    ||||||||    
T  17389871 gtgcgaaa 17389878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 151 - 198
Target Start/End: Complemental strand, 40226342 - 40226295
Alignment:
Q  151 attcgattttcagagggaacaacgattggtcagtgtgcatgcctctac 198  Q
    |||||||| ||||||| ||||||| ||||||||| |||||||||||||    
T  40226342 attcgattatcagaggtaacaacgcttggtcagtatgcatgcctctac 40226295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 188 - 250
Target Start/End: Original strand, 5504076 - 5504138
Alignment:
Q  188 catgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaaccagtgcgaaa 250  Q
    ||||||||||| || |||||| |||||||||||| || || ||||||||||||| || |||||    
T  5504076 catgcctctacgcatgagccggattagtcgtccacctttgatgggtcggaaaccggtacgaaa 5504138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 204
Target Start/End: Original strand, 28416946 - 28417007
Alignment:
Q  143 aataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacga 204  Q
    ||||||||||| |||| ||||||||||||||| |||| ||| | |||||| ||||| |||||    
T  28416946 aataccggatttgattctcagagggaacaacgtttggccagggcgcatgcatctacgcacga 28417007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 141 - 250
Target Start/End: Original strand, 34697333 - 34697442
Alignment:
Q  141 ggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaac 240  Q
    |||||||| | ||||||| | || |||||||||  ||||  ||||||||||||||||| || |||||| |||||||| |||  | || ||||| ||||||    
T  34697333 ggaataccaggttcgattcttagggggaacaacacttggctagtgtgcatgcctctacgcatgagccggattagtcgcccacttttgatgggttggaaac 34697432  T
Q  241 cagtgcgaaa 250  Q
    |  |||||||    
T  34697433 cgatgcgaaa 34697442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 171 - 216
Target Start/End: Original strand, 50952261 - 50952306
Alignment:
Q  171 aacgattggtcagtgtgcatgcctctacacacgagccgaattagtc 216  Q
    ||||||||| |||||||||||||||||| |||||| | ||||||||    
T  50952261 aacgattggccagtgtgcatgcctctacgcacgagacaaattagtc 50952306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 217
Target Start/End: Complemental strand, 21849291 - 21849239
Alignment:
Q  165 gggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcg 217  Q
    |||||||||| ||||  |||| |||||||||||| ||||||||| ||||||||    
T  21849291 gggaacaacgcttggctagtgcgcatgcctctacgcacgagccggattagtcg 21849239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 241
Target Start/End: Original strand, 25165391 - 25165498
Alignment:
Q  133 gtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtggg 232  Q
    ||||||| |||||||||||||||||| |||| |||||||||  |  | ||||| |||||||||||  ||| ||||| |||||||   || || |||||||    
T  25165391 gtacctggggaataccggattcgattatcag-gggaacaacactctgccagtgcgcatgcctctaggcacaagccggattagtcactcacctttggtggg 25165489  T
Q  233 tcggaaacc 241  Q
    |||| ||||    
T  25165490 tcggtaacc 25165498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 59; Significance: 4e-25; HSPs: 61)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 124 - 250
Target Start/End: Original strand, 42086308 - 42086434
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatc 223  Q
    |||||||| ||||| | |||||||||| |||||||  ||| |||||||||| |||  ||||| |||||||||||| || |||||| |||||||||||| |    
T  42086308 tccaaggacgtacccgaggaataccgggttcgattcccagggggaacaacgcttgaccagtgcgcatgcctctacgcatgagccggattagtcgtccacc 42086407  T
Q  224 tatggtgggtcggaaaccagtgcgaaa 250  Q
    | |||||||||||||||| ||||||||    
T  42086408 tttggtgggtcggaaaccggtgcgaaa 42086434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 124 - 250
Target Start/End: Complemental strand, 4016381 - 4016255
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatc 223  Q
    |||||||| ||||||| | |||| ||| ||||||| |||| |||||||||  |||| ||||| |||||||||||||||||||||| |||||| |  || |    
T  4016381 tccaaggacgtacctgagaaatatcgggttcgattatcagggggaacaacacttggccagtgcgcatgcctctacacacgagccggattagttgctcacc 4016282  T
Q  224 tatggtgggtcggaaaccagtgcgaaa 250  Q
      |||||||||||||||||||||||||    
T  4016281 attggtgggtcggaaaccagtgcgaaa 4016255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 141 - 250
Target Start/End: Complemental strand, 38897827 - 38897719
Alignment:
Q  141 ggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaac 240  Q
    |||||||||| |||||||| ||| |||||||||| |||| ||||| |||||||||||| ||||||||| |||||| | ||| || |||||| ||||||||    
T  38897827 ggaataccgggttcgatttccag-gggaacaacgcttggccagtgcgcatgcctctacgcacgagccggattagttgcccacctttggtggatcggaaac 38897729  T
Q  241 cagtgcgaaa 250  Q
    ||||||||||    
T  38897728 cagtgcgaaa 38897719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 142 - 250
Target Start/End: Original strand, 9805003 - 9805111
Alignment:
Q  142 gaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaacc 241  Q
    ||||||||| |||||||  ||| |||||||||| |||| ||||| |||||||||||| || |||||| |||||||||||| || |||||||||||||||     
T  9805003 gaataccgggttcgattcccagggggaacaacgcttggccagtgcgcatgcctctacgcatgagccggattagtcgtccacctttggtgggtcggaaaca 9805102  T
Q  242 agtgcgaaa 250  Q
     ||||||||    
T  9805103 ggtgcgaaa 9805111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 124 - 250
Target Start/End: Original strand, 7866562 - 7866688
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatc 223  Q
    |||||||| ||||| | |||||||||| |||||||   ||  ||||||||| |||| |||||||||||||||||| ||||| ||| |||||||| ||| |    
T  7866562 tccaaggacgtacccgaggaataccgggttcgattccgaggaggaacaacgcttggccagtgtgcatgcctctacgcacgaaccggattagtcgcccacc 7866661  T
Q  224 tatggtgggtcggaaaccagtgcgaaa 250  Q
    | ||||||||  |||||||||||||||    
T  7866662 tttggtgggttagaaaccagtgcgaaa 7866688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 141 - 239
Target Start/End: Original strand, 12081906 - 12082004
Alignment:
Q  141 ggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaa 239  Q
    ||||||| || ||||||| |||| |||||||||| |||| ||||| |||||| ||||| |||||||||||||||||||||| || ||||| ||||||||    
T  12081906 ggaatactgggttcgattctcagggggaacaacgcttggccagtgcgcatgcatctacgcacgagccgaattagtcgtccacctttggtgagtcggaaa 12082004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 142 - 246
Target Start/End: Complemental strand, 18136388 - 18136280
Alignment:
Q  142 gaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccg----aattagtcgtccatctatggtgggtcgga 237  Q
    ||||||||| |||||||  ||| |||||||||  |||||||||||||||||||||||||| ||||||    ||||||||||||| |  ||||||||||||    
T  18136388 gaataccgggttcgattcccagggggaacaacacttggtcagtgtgcatgcctctacacatgagccggattaattagtcgtccaccattggtgggtcgga 18136289  T
Q  238 aaccagtgc 246  Q
    |||| ||||    
T  18136288 aaccggtgc 18136280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 124 - 250
Target Start/End: Original strand, 8513500 - 8513626
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatc 223  Q
    |||||||| ||||| | |||||||||| |||||||   || || ||||| | |||| |||||  ||||||||||| ||||||||  |||||||||||| |    
T  8513500 tccaaggacgtacccggggaataccgggttcgattcctaggggaaacaatgcttggccagtgcacatgcctctacgcacgagccagattagtcgtccacc 8513599  T
Q  224 tatggtgggtcggaaaccagtgcgaaa 250  Q
    | |||||||||||||||| ||||||||    
T  8513600 tttggtgggtcggaaaccggtgcgaaa 8513626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 141 - 250
Target Start/End: Original strand, 1538429 - 1538538
Alignment:
Q  141 ggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaac 240  Q
    |||||||||| |||||||  ||| |||||||||  |||| ||||| |||||||||||| || |||||| |||| ||||||| |  |||||||||||||||    
T  1538429 ggaataccgggttcgattcccagggggaacaacacttggccagtgcgcatgcctctacgcatgagccggattaatcgtccaccattggtgggtcggaaac 1538528  T
Q  241 cagtgcgaaa 250  Q
    | ||||||||    
T  1538529 cggtgcgaaa 1538538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 124 - 221
Target Start/End: Original strand, 14152031 - 14152128
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtcca 221  Q
    ||||| |||||||||| |||||||||| ||||||| ||| ||||||||||| |||| |||||||||||| ||||  || |||||| |||| |||||||    
T  14152031 tccaatgatgtacctggggaataccgggttcgattctcatagggaacaacgcttggccagtgtgcatgcttctatccatgagccggattaatcgtcca 14152128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 141 - 250
Target Start/End: Original strand, 23383655 - 23383764
Alignment:
Q  141 ggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaac 240  Q
    |||||||||| |||||||  ||| |||||||||| |||| ||||| || ||||||||| || |||| | |||||||||||| || |||||||||||||||    
T  23383655 ggaataccgggttcgattcccagggggaacaacgcttggccagtgcgcttgcctctacgcatgagctggattagtcgtccacctttggtgggtcggaaac 23383754  T
Q  241 cagtgcgaaa 250  Q
      ||||||||    
T  23383755 tggtgcgaaa 23383764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 143 - 250
Target Start/End: Original strand, 14728082 - 14728190
Alignment:
Q  143 aataccggattcgattttcagaggga-acaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaacc 241  Q
    ||||||||||||||||||||| |||  |||||| |||||||||| |||||||||||| || |||||| |||||| |  || || || |||||||||||||    
T  14728082 aataccggattcgattttcagggggggacaacgcttggtcagtgcgcatgcctctacgcatgagccggattagttgctcacctttgatgggtcggaaacc 14728181  T
Q  242 agtgcgaaa 250  Q
     ||||||||    
T  14728182 ggtgcgaaa 14728190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 127 - 250
Target Start/End: Original strand, 37263225 - 37263347
Alignment:
Q  127 aaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctat 226  Q
    ||||| ||||| | |||||| ||| ||||||| |||| |||||||||| |||| || || |||||||||||| ||||||||| |||||||||||| || |    
T  37263225 aaggacgtacccggggaatatcgggttcgattctcag-gggaacaacgcttggccaatgcgcatgcctctacgcacgagccggattagtcgtccaccttt 37263323  T
Q  227 ggtgggtcggaaaccagtgcgaaa 250  Q
      ||| ||||||||| ||||||||    
T  37263324 attggatcggaaaccggtgcgaaa 37263347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 124 - 250
Target Start/End: Complemental strand, 5732046 - 5731920
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatc 223  Q
    |||||||| ||||| | |||||||||| |||||||  |||  ||||||||| |||| ||||| ||||||||||||  | |||||  ||||||||| || |    
T  5732046 tccaaggacgtacccggggaataccgggttcgattcccaggaggaacaacgcttggccagtgcgcatgcctctacgtatgagccagattagtcgttcacc 5731947  T
Q  224 tatggtgggtcggaaaccagtgcgaaa 250  Q
    | | |||||||||||||| ||||||||    
T  5731946 tttagtgggtcggaaaccggtgcgaaa 5731920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 124 - 250
Target Start/End: Original strand, 9812853 - 9812979
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatc 223  Q
    |||||||| ||||| | |||||||||| |||||||   ||  ||||||||| |||| |||||||||||| ||||| || || ||| |||||||| ||| |    
T  9812853 tccaaggacgtacccggggaataccgggttcgattccgaggaggaacaacgcttggccagtgtgcatgcttctacgcatgaaccggattagtcgcccacc 9812952  T
Q  224 tatggtgggtcggaaaccagtgcgaaa 250  Q
    | ||||||||| |||||| ||||||||    
T  9812953 tttggtgggtcagaaaccggtgcgaaa 9812979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 124 - 250
Target Start/End: Original strand, 12766112 - 12766238
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatc 223  Q
    |||||||| ||||| | |||||||||| ||||||| | ||  ||||||| | |||| |||||||||||||||||| || || ||  |||||||| ||| |    
T  12766112 tccaaggacgtacccggggaataccgggttcgattctgaggaggaacaatgcttggccagtgtgcatgcctctacgcatgaaccagattagtcgcccacc 12766211  T
Q  224 tatggtgggtcggaaaccagtgcgaaa 250  Q
    | ||||||||| |||||| ||||||||    
T  12766212 tttggtgggtcagaaaccggtgcgaaa 12766238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 124 - 250
Target Start/End: Original strand, 13664241 - 13664367
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatc 223  Q
    |||||||| ||| ||  |||||||||||||||||| |||| |||||||||  |||| ||||| |||||||||||| || |||||  |||| |||  || |    
T  13664241 tccaaggacgtatctagggaataccggattcgattatcagggggaacaacacttggccagtgcgcatgcctctacgcatgagccagattaatcgatcacc 13664340  T
Q  224 tatggtgggtcggaaaccagtgcgaaa 250  Q
    | ||||| |||||||||| ||||||||    
T  13664341 tttggtgtgtcggaaaccggtgcgaaa 13664367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 124 - 250
Target Start/End: Original strand, 19572705 - 19572831
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatc 223  Q
    |||||||| ||| | | |||||||||| || ||||  ||| |||||||||  |||| ||||| |||||||||||| || |||||| ||||||||| || |    
T  19572705 tccaaggacgtatccggggaataccgggttagattcccagggggaacaacacttggccagtgcgcatgcctctacgcatgagccggattagtcgttcacc 19572804  T
Q  224 tatggtgggtcggaaaccagtgcgaaa 250  Q
      |||||||| ||||||||||||||||    
T  19572805 attggtgggttggaaaccagtgcgaaa 19572831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 124 - 250
Target Start/End: Complemental strand, 23247477 - 23247352
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatc 223  Q
    |||||||| ||||||| |||||| ||| |||||||  |||  ||||||||| ||| ||||| ||||||||||||| ||||||||  |||||||||||| |    
T  23247477 tccaaggacgtacctggggaatatcgggttcgattcccaggaggaacaacgcttgatcagtatgcatgcctctacgcacgagccagattagtcgtccacc 23247378  T
Q  224 tatggtgggtcggaaaccagtgcgaaa 250  Q
    | || | ||||| ||||| ||||||||    
T  23247377 tttgat-ggtcgaaaaccggtgcgaaa 23247352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 124 - 250
Target Start/End: Original strand, 30349560 - 30349686
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatc 223  Q
    |||||||| ||| | | |||||||||| || |||||  || |||||||| |||||| ||||| |||||||||||  || |||| |||||||||||||| |    
T  30349560 tccaaggacgtatccggggaataccgggtttgatttctagggggaacaatgattggccagtgcgcatgcctctatgcatgagctgaattagtcgtccacc 30349659  T
Q  224 tatggtgggtcggaaaccagtgcgaaa 250  Q
    |  |||||| |||||||| ||||||||    
T  30349660 ttaggtgggccggaaaccggtgcgaaa 30349686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 124 - 241
Target Start/End: Original strand, 15034056 - 15034173
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatc 223  Q
    |||||||||||||| | |||||||||| ||| |||| ||  || ||||||  ||||||||||||||||||||||| || |||||  |||||| ||||| |    
T  15034056 tccaaggatgtacccggggaataccgggttcaatttccatgggaaacaacacttggtcagtgtgcatgcctctacgcatgagcctgattagttgtccacc 15034155  T
Q  224 tatggtgggtcggaaacc 241  Q
    | || ||| |||||||||    
T  15034156 tttgatggatcggaaacc 15034173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 141 - 250
Target Start/End: Complemental strand, 18262727 - 18262618
Alignment:
Q  141 ggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaac 240  Q
    |||||||||| ||| |||||||| |||||||||| |||  ||||| |||| ||||||||||||||||| |||||||| ||| || || ||| ||| |||     
T  18262727 ggaataccgggttctattttcagggggaacaacgcttgaccagtgcgcatacctctacacacgagccggattagtcgcccacctctgatggatcgaaaat 18262628  T
Q  241 cagtgcgaaa 250  Q
    | ||||||||    
T  18262627 cggtgcgaaa 18262618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 165 - 242
Target Start/End: Complemental strand, 18294569 - 18294492
Alignment:
Q  165 gggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaacca 242  Q
    |||||||||| |||||||||| |||| |||||||||| || ||| |||| ||| |||||| |||||||||||||||||    
T  18294569 gggaacaacgcttggtcagtgcgcatacctctacacatgaaccggattaatcgcccatctttggtgggtcggaaacca 18294492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 141 - 250
Target Start/End: Original strand, 40117413 - 40117522
Alignment:
Q  141 ggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaac 240  Q
    |||||| || ||||||||| ||| |||||||||| |||| ||||| |||||||||||| || |||||| |||| |||| || || |||||| ||| ||||    
T  40117413 ggaatatcgaattcgatttccagggggaacaacgcttggccagtgcgcatgcctctacgcatgagccggattaatcgttcacctttggtggatcgaaaac 40117512  T
Q  241 cagtgcgaaa 250  Q
    | ||||||||    
T  40117513 cggtgcgaaa 40117522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 157 - 250
Target Start/End: Original strand, 43399142 - 43399235
Alignment:
Q  157 ttttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaaccagtgcgaaa 250  Q
    ||||||| ||||| |||| |||| ||||| |||||||||||| ||||||| | ||||||||||||  | |||| ||||||||||| ||||||||    
T  43399142 ttttcagggggaataacgcttggccagtgcgcatgcctctacgcacgagcaggattagtcgtccacatttggttggtcggaaaccggtgcgaaa 43399235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 126 - 250
Target Start/End: Complemental strand, 14588741 - 14588617
Alignment:
Q  126 caaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatcta 225  Q
    |||||| ||| ||| |||||| ||| ||||||||||||  |||| |||| |||  ||||| |||||||||||| || |||||| |||||||||||| ||     
T  14588741 caaggacgtatctggggaatatcgggttcgattttcaggaggaataacgcttgaccagtgcgcatgcctctacgcatgagccggattagtcgtccacctt 14588642  T
Q  226 tggtgggtcggaaaccagtgcgaaa 250  Q
    ||||| | || ||||| ||||||||    
T  14588641 tggtgagccgaaaaccggtgcgaaa 14588617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 142 - 250
Target Start/End: Complemental strand, 42291613 - 42291505
Alignment:
Q  142 gaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaacc 241  Q
    ||||||||| || ||||  ||| | |||||||| |||| |||||  ||||||||||| ||||||||| |||||||||||| || || ||| |||||||||    
T  42291613 gaataccgggtttgattcccagggtgaacaacgcttggccagtgcacatgcctctacgcacgagccggattagtcgtccacctttgatggatcggaaacc 42291514  T
Q  242 agtgcgaaa 250  Q
     ||||||||    
T  42291513 ggtgcgaaa 42291505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 155 - 250
Target Start/End: Complemental strand, 20682712 - 20682617
Alignment:
Q  155 gattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaaccagtgcgaaa 250  Q
    ||||| ||| |||||||||| |||| ||||| |||||||||||| ||||||||| |||| ||| ||| || | |||||| ||||||| ||||||||    
T  20682712 gatttccagggggaacaacgcttggccagtgcgcatgcctctacgcacgagccggattaatcgaccacctttagtgggttggaaaccggtgcgaaa 20682617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 124 - 250
Target Start/End: Original strand, 12704995 - 12705121
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatc 223  Q
    |||||||| ||||| | |||||||||| |||||||   ||  ||||||||| |||  |||||||||||| ||||| || || ||| |||||||| ||| |    
T  12704995 tccaaggacgtacccggggaataccgggttcgattccgaggaggaacaacgcttgaccagtgtgcatgcttctacgcatgaaccggattagtcgcccacc 12705094  T
Q  224 tatggtgggtcggaaaccagtgcgaaa 250  Q
    | ||||||||| |||||| ||||||||    
T  12705095 tttggtgggtcagaaaccggtgcgaaa 12705121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 124 - 250
Target Start/End: Complemental strand, 25417309 - 25417183
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatc 223  Q
    |||||||| ||||  | |||||||||| |||||||  ||| |||||||||| |||| ||||| ||||||||||||  |||||||| ||||||| |  | |    
T  25417309 tccaaggacgtactcggggaataccgggttcgattcccagggggaacaacgcttggccagtgcgcatgcctctacgaacgagccggattagtcatttacc 25417210  T
Q  224 tatggtgggtcggaaaccagtgcgaaa 250  Q
      ||||||||| |||||| ||||||||    
T  25417209 attggtgggtcagaaaccggtgcgaaa 25417183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 162 - 216
Target Start/End: Complemental strand, 35006823 - 35006769
Alignment:
Q  162 agagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtc 216  Q
    ||||||||||||| ||||||||||||||||||||||| ||||||||  |||||||    
T  35006823 agagggaacaacgcttggtcagtgtgcatgcctctacgcacgagccagattagtc 35006769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 151 - 221
Target Start/End: Complemental strand, 35638132 - 35638062
Alignment:
Q  151 attcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtcca 221  Q
    |||||||||||||  ||||||||| ||||||||||||||| ||||||| |||||| |  ||||||||||||    
T  35638132 attcgattttcaggaggaacaacgtttggtcagtgtgcatacctctacgcacgagtcagattagtcgtcca 35638062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 124 - 217
Target Start/End: Original strand, 39728368 - 39728461
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcg 217  Q
    |||||| | ||||| | |||||||| | ||||||| ||||||| ||||||  |||| |||||||||||||||||| | |||| |||||||||||    
T  39728368 tccaagaacgtacccggggaataccaggttcgattatcagaggaaacaacacttggccagtgtgcatgcctctacgctcgagtcgaattagtcg 39728461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 126 - 250
Target Start/End: Original strand, 20525821 - 20525945
Alignment:
Q  126 caaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatcta 225  Q
    |||||||||| | | |||||| ||| |||||||  |||  ||||||||  || | ||||| |||||||||||| || |||||| |||||||||||| |      
T  20525821 caaggatgtatccggggaatatcgggttcgattcccaggtggaacaacacttcgccagtgcgcatgcctctacgcatgagccggattagtcgtccaccat 20525920  T
Q  226 tggtgggtcggaaaccagtgcgaaa 250  Q
    |||||| ||||||||| ||||||||    
T  20525921 tggtggatcggaaaccggtgcgaaa 20525945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 139 - 250
Target Start/End: Original strand, 5079327 - 5079437
Alignment:
Q  139 gtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaa 238  Q
    ||||||||||||  | ||||| ||| ||||||| || ||||||| || |||||| ||||| ||||||||| |||||||| ||| || |||| ||||| ||    
T  5079327 gtggaataccggggttgatttccagggggaacagcgcttggtcaatgcgcatgcttctacgcacgagccggattagtcgcccacctttggt-ggtcgaaa 5079425  T
Q  239 accagtgcgaaa 250  Q
    ||| ||||||||    
T  5079426 accggtgcgaaa 5079437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 124 - 231
Target Start/End: Original strand, 30995102 - 30995209
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatc 223  Q
    |||||||| |||| || |||||||| | |||||||  ||| |||||||||  |||| ||| | |||||||||||| ||||||||| ||||||||  ||||    
T  30995102 tccaaggacgtacatggggaataccaggttcgattcccagggggaacaacacttggccagggcgcatgcctctacgcacgagccggattagtcgctcatc 30995201  T
Q  224 tatggtgg 231  Q
    | ||||||    
T  30995202 tttggtgg 30995209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 187 - 250
Target Start/End: Original strand, 40773317 - 40773380
Alignment:
Q  187 gcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaaccagtgcgaaa 250  Q
    ||||||||||||| ||||| || ||||||||| ||||| ||||| |||||||||| ||||||||    
T  40773317 gcatgcctctacatacgagtcggattagtcgttcatctttggtgcgtcggaaaccggtgcgaaa 40773380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 124 - 250
Target Start/End: Complemental strand, 11845927 - 11845801
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatc 223  Q
    |||||||| ||||| | | |||| ||| ||||||||  || |||||||||| |||| ||||| ||||||||||||  | ||||||||||| ||| ||| |    
T  11845927 tccaaggacgtacccgagaaatatcgggttcgatttcgagggggaacaacgtttggccagtgcgcatgcctctacgtatgagccgaattaatcgcccacc 11845828  T
Q  224 tatggtgggtcggaaaccagtgcgaaa 250  Q
    | || ||||| ||||||| ||| ||||    
T  11845827 tttgatgggttggaaaccggtgtgaaa 11845801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 143 - 205
Target Start/End: Original strand, 19839327 - 19839389
Alignment:
Q  143 aataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgag 205  Q
    |||||||||||| ||||||||  ||||||||| ||| |||||| ||||||||||||| |||||    
T  19839327 aataccggattcaattttcaggaggaacaacgcttgatcagtgcgcatgcctctacatacgag 19839389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 164 - 250
Target Start/End: Original strand, 21375372 - 21375458
Alignment:
Q  164 agggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaaccagtgcgaaa 250  Q
    ||||||||||  |||  ||||| |||||| ||||| || ||| || ||||||||||||||| || ||| ||||||||||||||||||    
T  21375372 agggaacaacatttgaccagtgcgcatgcttctacgcatgagtcggattagtcgtccatctttgatggatcggaaaccagtgcgaaa 21375458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 152 - 246
Target Start/End: Complemental strand, 24463984 - 24463890
Alignment:
Q  152 ttcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaaccagtgc 246  Q
    |||||||||||  | ||||||||||||| ||||| |||||||||||  ||||||||| |||||||| ||| || |  ||||||| ||||| ||||    
T  24463984 ttcgattttcaaggcgaacaacgattggccagtgcgcatgcctctatgcacgagccggattagtcgcccacctttactgggtcgaaaaccggtgc 24463890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 124 - 250
Target Start/End: Complemental strand, 41163585 - 41163460
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatc 223  Q
    |||||| | ||||| | |||||||||| |||||||  ||| |||||||||| |||| |||||  |||| |||||| || |||| | |||||||||||| |    
T  41163585 tccaagaacgtacccggggaataccgggttcgattcccag-gggaacaacgtttggccagtgcacatgtctctacgcatgagctggattagtcgtccacc 41163487  T
Q  224 tatggtgggtcggaaaccagtgcgaaa 250  Q
    | | |||||||||||||  ||||||||    
T  41163486 ttttgtgggtcggaaactggtgcgaaa 41163460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 141 - 239
Target Start/End: Original strand, 41800975 - 41801073
Alignment:
Q  141 ggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaa 239  Q
    |||||| ||| ||||||| |||  |||||||||| |||  || || ||||| |||||| ||||||||| ||||||||| ||||| || |||||||||||    
T  41800975 ggaatatcgggttcgattctcaaggggaacaacgcttgaccaatgcgcatgtctctacgcacgagccggattagtcgttcatctttgatgggtcggaaa 41801073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 141 - 198
Target Start/End: Original strand, 20705561 - 20705618
Alignment:
Q  141 ggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctac 198  Q
    |||||| ||||||| |||||||| | |||||||| |||||||||| ||||||||||||    
T  20705561 ggaatatcggattcaattttcagggagaacaacgtttggtcagtgcgcatgcctctac 20705618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 141 - 206
Target Start/End: Original strand, 25467408 - 25467473
Alignment:
Q  141 ggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagc 206  Q
    |||||||  ||||||||||||||  |||||||||||||| ||||  |||||||||||| |||||||    
T  25467408 ggaatactagattcgattttcaggaggaacaacgattggccagtacgcatgcctctacgcacgagc 25467473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 165 - 246
Target Start/End: Complemental strand, 39099864 - 39099783
Alignment:
Q  165 gggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaaccagtgc 246  Q
    |||||||||  |||| |||||  ||||||||||| || |||||| |||||||| ||| || |||||||||||||||| ||||    
T  39099864 gggaacaacacttggccagtgcacatgcctctacgcatgagccggattagtcgcccacctttggtgggtcggaaaccggtgc 39099783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 192
Target Start/End: Original strand, 1898982 - 1899050
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgc 192  Q
    |||||||||||||| | |||||||||| |||||||  ||| |||||||||| |||| ||||| ||||||    
T  1898982 tccaaggatgtacccggggaataccgggttcgattcccagggggaacaacgcttggccagtgcgcatgc 1899050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 246
Target Start/End: Complemental strand, 3653997 - 3653918
Alignment:
Q  167 gaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaaccagtgc 246  Q
    |||||||| |||  ||||| |||||||||||| |||||| || |||||||||||| || |||||| ||| ||||| ||||    
T  3653997 gaacaacgcttgaccagtgcgcatgcctctacgcacgaggcggattagtcgtccacctttggtggatcgaaaaccggtgc 3653918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 250
Target Start/End: Original strand, 24875369 - 24875452
Alignment:
Q  167 gaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaaccagtgcgaaa 250  Q
    |||||||| |||  ||||| ||||| |||||| ||||||||| |||| ||||||| || || ||||||||||| || |||||||    
T  24875369 gaacaacgtttgaccagtgcgcatgtctctacgcacgagccggattaatcgtccacctttgatgggtcggaaatcaatgcgaaa 24875452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 187 - 250
Target Start/End: Complemental strand, 27648488 - 27648425
Alignment:
Q  187 gcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaaccagtgcgaaa 250  Q
    ||||||||||||  | |||||| ||||||||||||||| |||||| |||||||||  |||||||    
T  27648488 gcatgcctctacgtatgagccggattagtcgtccatctttggtggatcggaaaccgatgcgaaa 27648425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 240
Target Start/End: Complemental strand, 6764525 - 6764467
Alignment:
Q  182 agtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaac 240  Q
    |||| |||||||||||| ||||||||| |||||||| | |||| || ||||||||||||    
T  6764525 agtgcgcatgcctctacgcacgagccggattagtcgcctatctttgttgggtcggaaac 6764467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 240
Target Start/End: Original strand, 32874798 - 32874884
Alignment:
Q  154 cgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaac 240  Q
    |||||||||  |||||||||| |||   |||| |||| ||| ||| |||||||||||||| ||||||| |  |||||||||||||||    
T  32874798 cgattttcaaggggaacaacgcttgactagtgcgcatacctttacgcacgagccgaattaatcgtccaccattggtgggtcggaaac 32874884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 250
Target Start/End: Complemental strand, 42861292 - 42861218
Alignment:
Q  176 ttggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaaccagtgcgaaa 250  Q
    |||| ||||| |||||||||||| || |||||| |||| ||||||| |  |||||||||||| ||| ||||||||    
T  42861292 ttggccagtgcgcatgcctctacgcatgagccggattaatcgtccaccattggtgggtcggagaccggtgcgaaa 42861218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 124 - 217
Target Start/End: Complemental strand, 7308490 - 7308397
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcg 217  Q
    |||||||| |||  || |||||| ||| |||||||  ||| |||||||||| |||| |||||  ||||||||||| || |||||| ||||||||    
T  7308490 tccaaggacgtatttgaggaatatcgggttcgattcccagggggaacaacgcttgggcagtgcacatgcctctacgcatgagccggattagtcg 7308397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 166 - 235
Target Start/End: Complemental strand, 9168337 - 9168268
Alignment:
Q  166 ggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcg 235  Q
    ||||||||| |||| ||||| |||| ||||||| || |||||| |||||||||||| || | ||||||||    
T  9168337 ggaacaacgcttggccagtgcgcatacctctacgcatgagccggattagtcgtccacctttagtgggtcg 9168268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 181 - 250
Target Start/End: Original strand, 20255407 - 20255476
Alignment:
Q  181 cagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaaccagtgcgaaa 250  Q
    ||||| |||||||||||| || ||| || |||||||||||| || ||||| |||||||||  ||||||||    
T  20255407 cagtgcgcatgcctctacgcatgagtcggattagtcgtccacctttggtgagtcggaaactggtgcgaaa 20255476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 156 - 217
Target Start/End: Original strand, 25452939 - 25452999
Alignment:
Q  156 attttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcg 217  Q
    |||||||| |||||||| | |||  |||||||||||||||||| ||||||||| ||||||||    
T  25452939 attttcag-gggaacaatgtttgaccagtgtgcatgcctctacgcacgagccggattagtcg 25452999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 205
Target Start/End: Original strand, 21149732 - 21149796
Alignment:
Q  141 ggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgag 205  Q
    |||||||| | |||||||||||| |||||||||| |||  ||||| ||||| |||||| ||||||    
T  21149732 ggaataccaggttcgattttcagggggaacaacgtttgaccagtgcgcatgactctacgcacgag 21149796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 250
Target Start/End: Original strand, 21487626 - 21487721
Alignment:
Q  152 ttcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaaccagtgcgaaa 250  Q
    ||||||||||||  ||||||||| ||||  |||| ||||||||||   ||||||||| |||||||| ||| || |  ||||||| ||||| ||||||||    
T  21487626 ttcgattttcaggaggaacaacgtttggctagtgcgcatgcctct---cacgagccggattagtcgcccacctttaatgggtcgaaaaccggtgcgaaa 21487721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 239
Target Start/End: Original strand, 24499010 - 24499078
Alignment:
Q  171 aacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaa 239  Q
    |||| ||| |||||| ||||||||||||  |||||||| |||| | |||||||| |||||||| |||||    
T  24499010 aacgcttgatcagtgcgcatgcctctacgtacgagccggattaatagtccatctttggtgggttggaaa 24499078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 208
Target Start/End: Original strand, 28857109 - 28857193
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccg 208  Q
    |||||||| | ||| | |||||||||| |||||||  ||| |||||||||  |||| ||||| |||||||||||| || ||||||    
T  28857109 tccaaggacgcacccggggaataccgggttcgattcccagggggaacaacacttggccagtgcgcatgcctctacgcatgagccg 28857193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 59; Significance: 4e-25; HSPs: 56)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 124 - 250
Target Start/End: Complemental strand, 25540530 - 25540404
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatc 223  Q
    |||||||| ||| ||| ||||||| || |||||||   || |||||||||| |||| ||||| |||||||||||| ||||||||| |||||||||||| |    
T  25540530 tccaaggacgtatctggggaatactgggttcgattcctagggggaacaacgcttggccagtgcgcatgcctctacgcacgagccggattagtcgtccacc 25540431  T
Q  224 tatggtgggtcggaaaccagtgcgaaa 250  Q
    | |||||||||||||||| ||||||||    
T  25540430 tttggtgggtcggaaaccggtgcgaaa 25540404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 124 - 250
Target Start/End: Original strand, 44139464 - 44139590
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatc 223  Q
    |||||||||| | ||| |||||||||| |||||||  ||| |||||||||| |||| ||||| || ||||||||| ||||||||| |||||||| ||| |    
T  44139464 tccaaggatgcatctggggaataccgggttcgattcccagggggaacaacgcttggccagtgcgcgtgcctctacgcacgagccggattagtcgcccacc 44139563  T
Q  224 tatggtgggtcggaaaccagtgcgaaa 250  Q
     ||||||||||||||||| ||||||||    
T  44139564 aatggtgggtcggaaaccggtgcgaaa 44139590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 124 - 250
Target Start/End: Complemental strand, 41032031 - 41031906
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatc 223  Q
    |||||||| ||||| | |||| ||||| |||||||  ||| |||||||||  |||| |||||||||||||||||| ||||||||| |||||||  ||| |    
T  41032031 tccaaggacgtaccag-ggaacaccgggttcgattcccagggggaacaacacttggccagtgtgcatgcctctacgcacgagccggattagtcacccacc 41031933  T
Q  224 tatggtgggtcggaaaccagtgcgaaa 250  Q
    | |||||||||||||||||||||||||    
T  41031932 tttggtgggtcggaaaccagtgcgaaa 41031906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 124 - 250
Target Start/End: Original strand, 41220615 - 41220741
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatc 223  Q
    |||||||| ||||| | |||||||||| |||||||  |||  ||||||||| |||| ||||| |||||||||||| || |||||||||||||||| || |    
T  41220615 tccaaggacgtacccggggaataccgggttcgattcccaggaggaacaacgcttggccagtgcgcatgcctctacgcatgagccgaattagtcgttcacc 41220714  T
Q  224 tatggtgggtcggaaaccagtgcgaaa 250  Q
    | | |||||||||||||| ||||||||    
T  41220715 tttagtgggtcggaaaccggtgcgaaa 41220741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 141 - 250
Target Start/End: Original strand, 12864221 - 12864330
Alignment:
Q  141 ggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaac 240  Q
    ||||||||||||||||||| ||| |||||||||  |||||||||| |||||||||| | || |||||  |||||||||||| |  |||||||||||||||    
T  12864221 ggaataccggattcgatttccagggggaacaacacttggtcagtgcgcatgcctctgcgcatgagccagattagtcgtccaccattggtgggtcggaaac 12864320  T
Q  241 cagtgcgaaa 250  Q
    | ||||||||    
T  12864321 cggtgcgaaa 12864330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 124 - 241
Target Start/End: Complemental strand, 39201634 - 39201517
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatc 223  Q
    |||||||| ||||  | ||||||||| |||||||| |||| |||||||| | |||| |||||||||||||||||| || |||||| ||||||||| || |    
T  39201634 tccaaggacgtactcgaggaataccgaattcgattctcagggggaacaatgtttggccagtgtgcatgcctctacgcatgagccggattagtcgttcacc 39201535  T
Q  224 tatggtgggtcggaaacc 241  Q
    | ||||||||||||||||    
T  39201534 tttggtgggtcggaaacc 39201517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 143 - 250
Target Start/End: Complemental strand, 10026723 - 10026616
Alignment:
Q  143 aataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaacca 242  Q
    |||||||| ||||||| |||| |||||||||| |||| ||||| |||||||||||| || |||||| |||||||| ||| || ||||||||||||||| |    
T  10026723 aataccgggttcgattctcagggggaacaacgtttggccagtgcgcatgcctctacgcatgagccggattagtcgaccacctttggtgggtcggaaacta 10026624  T
Q  243 gtgcgaaa 250  Q
    ||| ||||    
T  10026623 gtgtgaaa 10026616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 124 - 250
Target Start/End: Complemental strand, 9360874 - 9360748
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatc 223  Q
    |||||||| ||||| | |||||||| | |||||||   ||||| ||||||| |||| ||||| |||||||||||| |||||||||||||||||| ||| |    
T  9360874 tccaaggacgtacccggggaataccaggttcgattactagaggaaacaacgtttggccagtgcgcatgcctctacgcacgagccgaattagtcgcccacc 9360775  T
Q  224 tatggtgggtcggaaaccagtgcgaaa 250  Q
    | | ||||| |||||||| ||||||||    
T  9360774 tttagtgggccggaaaccggtgcgaaa 9360748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 124 - 250
Target Start/End: Original strand, 10823040 - 10823166
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatc 223  Q
    |||||||| ||||| | |||||||||| || ||||  |||  ||||||||| |||| ||||| |||||||||||| ||||||||| |||||||| ||| |    
T  10823040 tccaaggacgtacccggggaataccgggtttgattcccaggaggaacaacgcttggccagtgcgcatgcctctacgcacgagccggattagtcgcccacc 10823139  T
Q  224 tatggtgggtcggaaaccagtgcgaaa 250  Q
    | | |||||||||||||| ||||||||    
T  10823140 ttttgtgggtcggaaaccggtgcgaaa 10823166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 124 - 250
Target Start/End: Original strand, 37560153 - 37560279
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatc 223  Q
    |||||||| ||||| | |||||||| | ||||||| |||  |||||||||| |||||||||| |||||||||||| ||||||||| |||| ||||||| |    
T  37560153 tccaaggacgtacccgaggaataccaggttcgattctcaaggggaacaacgtttggtcagtgcgcatgcctctacgcacgagccggattaatcgtccacc 37560252  T
Q  224 tatggtgggtcggaaaccagtgcgaaa 250  Q
    | || ||||||| ||||| ||| ||||    
T  37560253 tttgatgggtcgaaaaccggtgtgaaa 37560279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 141 - 250
Target Start/End: Original strand, 38962760 - 38962869
Alignment:
Q  141 ggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaac 240  Q
    |||||||||| ||||||||||||  ||||||||| |||| ||||| |||||||||||| || || ||| |||||||||||| || ||||||||| |||||    
T  38962760 ggaataccgggttcgattttcaggaggaacaacgcttggccagtgcgcatgcctctacgcatgaaccggattagtcgtccacctttggtgggtcagaaac 38962859  T
Q  241 cagtgcgaaa 250  Q
      ||||||||    
T  38962860 tggtgcgaaa 38962869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 124 - 250
Target Start/End: Complemental strand, 2528467 - 2528341
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatc 223  Q
    |||||||| ||||  | |||| ||||| |||||||  ||| |||||||||| ||||||||||||||||||||||||||  ||||| ||||||||  ||||    
T  2528467 tccaaggacgtactcgaggaacaccgggttcgattcccagggggaacaacgcttggtcagtgtgcatgcctctacacataagccggattagtcgctcatc 2528368  T
Q  224 tatggtgggtcggaaaccagtgcgaaa 250  Q
    | | ||| |||||||||  ||||||||    
T  2528367 tttagtgagtcggaaactggtgcgaaa 2528341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 124 - 250
Target Start/End: Original strand, 7747254 - 7747380
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatc 223  Q
    |||||||| ||| | | |||||||||| |||||||   ||  ||||||||| |||| |||||||||||||||||| || |||||| ||||||||| || |    
T  7747254 tccaaggacgtatccggggaataccgggttcgattcctaggaggaacaacgtttggccagtgtgcatgcctctacgcatgagccggattagtcgttcacc 7747353  T
Q  224 tatggtgggtcggaaaccagtgcgaaa 250  Q
    | | |||||||||||||| ||||||||    
T  7747354 tttagtgggtcggaaaccggtgcgaaa 7747380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 124 - 250
Target Start/End: Original strand, 11069858 - 11069984
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatc 223  Q
    |||||||| ||||| | |||||||| | |||||||   || |||||||||| |||| ||||| |||| ||||||| ||||||| |||||||||||||| |    
T  11069858 tccaaggacgtacccggggaataccaggttcgattccgagggggaacaacgtttggccagtgcgcatacctctacgcacgagctgaattagtcgtccacc 11069957  T
Q  224 tatggtgggtcggaaaccagtgcgaaa 250  Q
      ||||||||||||||||  |||||||    
T  11069958 gttggtgggtcggaaaccgatgcgaaa 11069984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 124 - 250
Target Start/End: Original strand, 38005382 - 38005508
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatc 223  Q
    |||||||| ||||| | ||||||| || |||||||  ||  |||||||||| |||| ||||| ||||||||||||||| |||||| |||||||| ||| |    
T  38005382 tccaaggacgtacccggggaatactgggttcgattcccaaggggaacaacgcttggccagtgcgcatgcctctacacatgagccggattagtcgcccacc 38005481  T
Q  224 tatggtgggtcggaaaccagtgcgaaa 250  Q
    | |||||| ||||||||  ||||||||    
T  38005482 tttggtggatcggaaactggtgcgaaa 38005508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 141 - 235
Target Start/End: Complemental strand, 45263776 - 45263682
Alignment:
Q  141 ggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcg 235  Q
    |||||||||| |||||||  |||||||||||||| |||| ||||| |||||||||||| ||||||||| |||| |||  ||||| ||||||||||    
T  45263776 ggaataccgggttcgattcccagagggaacaacgcttggccagtgcgcatgcctctacgcacgagccggattaatcgctcatctttggtgggtcg 45263682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 141 - 250
Target Start/End: Complemental strand, 6358260 - 6358151
Alignment:
Q  141 ggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaac 240  Q
    |||||||| |||||||||| ||| |||||||||  |||| ||||| |||||||||||| || |||||| |||||||||||| |  |||||||||| ||||    
T  6358260 ggaataccagattcgatttccagggggaacaacacttggccagtgcgcatgcctctacgcatgagccggattagtcgtccaccattggtgggtcgaaaac 6358161  T
Q  241 cagtgcgaaa 250  Q
    | ||| ||||    
T  6358160 cggtgtgaaa 6358151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 141 - 250
Target Start/End: Original strand, 12455307 - 12455416
Alignment:
Q  141 ggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaac 240  Q
    |||||||||| |||||||| ||| || ||||||| || | ||||| |||||||||||| ||||||||| ||||||||  || |  |||||||||||||||    
T  12455307 ggaataccgggttcgatttccaggggaaacaacgcttagccagtgcgcatgcctctacgcacgagccggattagtcgctcaccattggtgggtcggaaac 12455406  T
Q  241 cagtgcgaaa 250  Q
    | ||||||||    
T  12455407 cggtgcgaaa 12455416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 141 - 250
Target Start/End: Complemental strand, 28616488 - 28616379
Alignment:
Q  141 ggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaac 240  Q
    |||||| ||| |||||||||||| ||||| |||  |||| ||||| |||||||||||| ||||||||  |||||||| |||||| | ||||||| |||||    
T  28616488 ggaatatcgggttcgattttcagggggaataacacttgggcagtgcgcatgcctctacgcacgagccagattagtcgcccatctttagtgggtcagaaac 28616389  T
Q  241 cagtgcgaaa 250  Q
    | ||||||||    
T  28616388 cggtgcgaaa 28616379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 124 - 249
Target Start/End: Original strand, 34356186 - 34356311
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatc 223  Q
    |||||||| ||| ||| |||||||||| |||||||| ||| |||||||||  |||||||||| |||||||||||  || |||||| |||| |||| || |    
T  34356186 tccaaggacgtatctggggaataccgggttcgatttccagggggaacaacacttggtcagtgcgcatgcctctatgcatgagccggattaatcgtgcacc 34356285  T
Q  224 tatggtgggtcggaaaccagtgcgaa 249  Q
      || |||||||||||| ||||||||    
T  34356286 attgatgggtcggaaacgagtgcgaa 34356311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 165 - 250
Target Start/End: Original strand, 35946759 - 35946844
Alignment:
Q  165 gggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaaccagtgcgaaa 250  Q
    |||||||||| |||| || ||||||||||||||| ||||||||| |||||||||||| |  |||||||||||||||  ||||||||    
T  35946759 gggaacaacgcttggccattgtgcatgcctctacgcacgagccggattagtcgtccaccattggtgggtcggaaactggtgcgaaa 35946844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 128 - 246
Target Start/End: Original strand, 7787040 - 7787158
Alignment:
Q  128 aggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatg 227  Q
    |||| ||||| | |||||||||| |||||||| ||| ||||||||   |||| ||||  |||||||||||| ||||||||| |||||||| |||||| ||    
T  7787040 aggacgtacccggggaataccgggttcgatttccagggggaacaatacttggccagtacgcatgcctctacgcacgagccggattagtcgcccatctttg 7787139  T
Q  228 gtgggtcggaaaccagtgc 246  Q
    |||| ||| ||||| ||||    
T  7787140 gtggatcgaaaaccggtgc 7787158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 124 - 250
Target Start/End: Original strand, 8410111 - 8410237
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatc 223  Q
    |||||||| ||||| |  ||||| ||| |||||||  ||| |||||||||  |||| ||||| |||||||||||| ||||||||| |||||||| |||      
T  8410111 tccaaggacgtacccggagaatatcgggttcgattcccagggggaacaacacttggccagtgcgcatgcctctacgcacgagccggattagtcgcccact 8410210  T
Q  224 tatggtgggtcggaaaccagtgcgaaa 250  Q
    | ||| |||||||||||| ||||||||    
T  8410211 tttggggggtcggaaaccggtgcgaaa 8410237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 152 - 250
Target Start/End: Original strand, 16325603 - 16325701
Alignment:
Q  152 ttcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaaccagtgcgaaa 250  Q
    |||||||  ||| |||||||||  |||| |||||||||||||||||| || |||||  |||||||||||| |  |||||||||||||||| ||||||||    
T  16325603 ttcgattcccagggggaacaacacttggccagtgtgcatgcctctacgcatgagccagattagtcgtccaccattggtgggtcggaaaccggtgcgaaa 16325701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 124 - 238
Target Start/End: Original strand, 22593115 - 22593228
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatc 223  Q
    |||||||| ||||| | ||||||| |  |||||||  ||| |||||||||| |||| ||||| |||||||||||| || |||||| |||||||||||| |    
T  22593115 tccaaggacgtacccggggaatactgagttcgattcccagggggaacaacg-ttggccagtgcgcatgcctctacgcatgagccggattagtcgtccacc 22593213  T
Q  224 tatggtgggtcggaa 238  Q
    | |||||||||||||    
T  22593214 tttggtgggtcggaa 22593228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 143 - 217
Target Start/End: Original strand, 29653626 - 29653700
Alignment:
Q  143 aataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcg 217  Q
    ||||||||||||||||| ||| |  ||||||| |||| ||||| |||||||||||| ||||||||||||||||||    
T  29653626 aataccggattcgatttccagggaaaacaacgcttgggcagtgcgcatgcctctacgcacgagccgaattagtcg 29653700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 124 - 250
Target Start/End: Complemental strand, 34346413 - 34346287
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatc 223  Q
    |||||||| ||||||| ||||||| || || |||| |||| |||||||||  |||| |||||||||||||||||| || ||| |  |||| |||  || |    
T  34346413 tccaaggacgtacctggggaatactgggtttgattatcagggggaacaacacttggccagtgtgcatgcctctacgcatgagtcagattaatcgctcacc 34346314  T
Q  224 tatggtgggtcggaaaccagtgcgaaa 250  Q
    | |||||||||||||||| ||||||||    
T  34346313 tttggtgggtcggaaaccggtgcgaaa 34346287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 124 - 217
Target Start/End: Original strand, 15079463 - 15079556
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcg 217  Q
    |||||||| ||||| | ||||||| || |||||||| ||| |||||||||| |||  ||||||||||| |||||| |||||||| |||||||||    
T  15079463 tccaaggacgtacccggggaatacagggttcgatttccagggggaacaacgcttgaccagtgtgcatgactctacgcacgagccaaattagtcg 15079556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 126 - 250
Target Start/End: Original strand, 29422197 - 29422321
Alignment:
Q  126 caaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatcta 225  Q
    |||||| ||||| | ||||||| || |||||||| |||||||||||||  |||| || || |||| ||| ||| ||||||||| |||||||||||| ||     
T  29422197 caaggacgtacccggggaatactgggttcgatttccagagggaacaacacttggccaatgagcatacctttacgcacgagccggattagtcgtccacctt 29422296  T
Q  226 tggtgggtcggaaaccagtgcgaaa 250  Q
    || ||| ||||||| | ||||||||    
T  29422297 tgatggatcggaaatcggtgcgaaa 29422321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 141 - 250
Target Start/End: Complemental strand, 20612645 - 20612534
Alignment:
Q  141 ggaataccggattcgattttcag-agggaacaacgattggtcagtgtgcatgcctctacacacgagccga-attagtcgtccatctatggtgggtcggaa 238  Q
    |||||||||| ||||||| |||| ||||||||||  |||| ||||| |||||||||||  || ||||||  |||||||||||| |  |||||||||||||    
T  20612645 ggaataccgggttcgattctcaggagggaacaacacttggccagtgcgcatgcctctatgcatgagccgggattagtcgtccaccattggtgggtcggaa 20612546  T
Q  239 accagtgcgaaa 250  Q
    ||| ||||||||    
T  20612545 accggtgcgaaa 20612534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 142 - 233
Target Start/End: Original strand, 24179568 - 24179657
Alignment:
Q  142 gaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggt 233  Q
    ||||||||| ||||||| |||| |||||||||| |||| |||||  ||||||||||| || |||||| ||||||||||||||| ||||||||    
T  24179568 gaataccgg-ttcgattctcag-gggaacaacgtttggccagtgcacatgcctctacgcatgagccggattagtcgtccatctttggtgggt 24179657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 124 - 250
Target Start/End: Complemental strand, 3811817 - 3811691
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatc 223  Q
    |||||||| ||||  | |||||| ||| |||||||  |||||||||||||  ||||||| || |||||||||||| || |||||| |||| ||| ||| |    
T  3811817 tccaaggacgtactcgaggaatatcgggttcgattcccagagggaacaacacttggtcaatgcgcatgcctctacgcatgagccggattactcgcccacc 3811718  T
Q  224 tatggtgggtcggaaaccagtgcgaaa 250  Q
    | ||||||||| ||||||  |||||||    
T  3811717 tttggtgggtcagaaaccgatgcgaaa 3811691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 124 - 250
Target Start/End: Original strand, 16034917 - 16035043
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatc 223  Q
    |||||||| ||| | | |||||||||| ||||||||||||  ||||||||| |||  |||||||||||||| |||  |||||||| ||||||||  || |    
T  16034917 tccaaggacgtatccgaggaataccgggttcgattttcaggcggaacaacgcttgaccagtgtgcatgcctatacgtacgagccggattagtcgctcacc 16035016  T
Q  224 tatggtgggtcggaaaccagtgcgaaa 250  Q
      || || |||||||||| ||||||||    
T  16035017 attgatgagtcggaaaccggtgcgaaa 16035043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 124 - 250
Target Start/End: Complemental strand, 18902656 - 18902530
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatc 223  Q
    |||||||| ||||  | |||||||||| |||||||  ||  |||||||||| |||  ||||| || || |||||| ||||||||  |||||||| ||| |    
T  18902656 tccaaggacgtactcggggaataccgggttcgattcccacggggaacaacgcttgaccagtgcgcgtgtctctacgcacgagccagattagtcgcccacc 18902557  T
Q  224 tatggtgggtcggaaaccagtgcgaaa 250  Q
    | |||||||||||||||| ||||||||    
T  18902556 tttggtgggtcggaaaccggtgcgaaa 18902530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 124 - 250
Target Start/End: Complemental strand, 19976933 - 19976807
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatc 223  Q
    |||||||| ||| | | |||||||||| |||||||||||| ||||| |||| |||||||||| ||||| |||||| ||  || ||||||||||| ||| |    
T  19976933 tccaaggacgtatccggggaataccgggttcgattttcagggggaataacgtttggtcagtgcgcatgtctctacgcataagtcgaattagtcgcccacc 19976834  T
Q  224 tatggtgggtcggaaaccagtgcgaaa 250  Q
    | || ||  ||||||| | ||||||||    
T  19976833 tttgatgaatcggaaatcggtgcgaaa 19976807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 165 - 250
Target Start/End: Complemental strand, 16813250 - 16813165
Alignment:
Q  165 gggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaaccagtgcgaaa 250  Q
    |||||||||| |||  ||||  |||||||||||  ||||||||| ||||||||||||||| |||| ||| ||||| ||||||||||    
T  16813250 gggaacaacgtttgaccagtacgcatgcctctatgcacgagccggattagtcgtccatctttggtaggttggaaatcagtgcgaaa 16813165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 165 - 250
Target Start/End: Complemental strand, 16852529 - 16852444
Alignment:
Q  165 gggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaaccagtgcgaaa 250  Q
    |||||||||| |||  ||||  |||||||||||  ||||||||| ||||||||||||||| |||| ||| ||||| ||||||||||    
T  16852529 gggaacaacgtttgaccagtacgcatgcctctatgcacgagccggattagtcgtccatctttggtaggttggaaatcagtgcgaaa 16852444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 166 - 250
Target Start/End: Complemental strand, 3643971 - 3643887
Alignment:
Q  166 ggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaaccagtgcgaaa 250  Q
    ||||||||| |||| ||||| |||||||||||| || |||| | |||||||||||| || ||||||| ||||||||  |||||||    
T  3643971 ggaacaacgcttggccagtgcgcatgcctctacgcatgagctggattagtcgtccacctttggtgggccggaaaccgttgcgaaa 3643887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 142 - 250
Target Start/End: Complemental strand, 10046584 - 10046477
Alignment:
Q  142 gaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaacc 241  Q
    ||||||||| ||||||| |||  || ||||||| |||  ||||| |||||||||||| || |||||| |||||||| ||| || |||||||||||||||     
T  10046584 gaataccgggttcgattctcaagggaaacaacgtttga-cagtgcgcatgcctctacgcatgagccggattagtcgaccacctttggtgggtcggaaact 10046486  T
Q  242 agtgcgaaa 250  Q
    |||| ||||    
T  10046485 agtgtgaaa 10046477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 166 - 250
Target Start/End: Original strand, 27725962 - 27726046
Alignment:
Q  166 ggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaaccagtgcgaaa 250  Q
    ||||||| | |||| ||||| |||||||||||| ||| ||||| |||||||| ||| | ||||||||||||||||| ||| ||||    
T  27725962 ggaacaatgcttggccagtgcgcatgcctctacgcactagccggattagtcgcccaccaatggtgggtcggaaaccggtgtgaaa 27726046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 126 - 250
Target Start/End: Complemental strand, 39807009 - 39806885
Alignment:
Q  126 caaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatcta 225  Q
    |||||| ||||| | |||||||||| |||||||  ||   | ||||||| |||| ||||| ||||||||||||||||||| || ||||||| |||| ||     
T  39807009 caaggacgtacccggggaataccgggttcgattcccaagagaaacaacgtttggccagtgcgcatgcctctacacacgagtcggattagtcatccacctt 39806910  T
Q  226 tggtgggtcggaaaccagtgcgaaa 250  Q
    |||||| ||  ||||| ||||||||    
T  39806909 tggtggttcataaaccggtgcgaaa 39806885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 166 - 250
Target Start/End: Original strand, 44945615 - 44945699
Alignment:
Q  166 ggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaaccagtgcgaaa 250  Q
    ||||||||| ||||  |||| |||||||||||| ||||||||| |||||||| ||| || | |||| ||||||||| ||||||||    
T  44945615 ggaacaacgcttggatagtgcgcatgcctctacgcacgagccggattagtcgcccacctttagtggatcggaaaccggtgcgaaa 44945699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 124 - 246
Target Start/End: Original strand, 10669572 - 10669694
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatc 223  Q
    |||||||| ||||||| ||  |||||| || ||||  ||| | |||||||| |||| ||||| ||||| |||||| |||||| || |||| |||| || |    
T  10669572 tccaaggacgtacctgggggctaccgggtttgattcccagggagaacaacgcttggccagtgcgcatgtctctacgcacgagtcggattaatcgttcacc 10669671  T
Q  224 tatggtgggtcggaaaccagtgc 246  Q
    | |||||||||||||||| ||||    
T  10669672 tttggtgggtcggaaaccggtgc 10669694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 141 - 250
Target Start/End: Original strand, 2784930 - 2785038
Alignment:
Q  141 ggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaac 240  Q
    |||||||||  |||||||||||| || |||||   |||||||||| |||||||||||| || ||| |  ||||||||||||||  || || |||||||||    
T  2784930 ggaataccgagttcgattttcag-ggaaacaagatttggtcagtgcgcatgcctctacgcatgagtcagattagtcgtccatcattgatgagtcggaaac 2785028  T
Q  241 cagtgcgaaa 250  Q
    | ||||||||    
T  2785029 cggtgcgaaa 2785038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 141 - 250
Target Start/End: Complemental strand, 14169718 - 14169609
Alignment:
Q  141 ggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaac 240  Q
    |||||| ||| ||||||| || | |||||||||  |||  ||||| ||||| |||||| || |||||| |||||||||| | |  |||||||||||||||    
T  14169718 ggaatatcgggttcgattctccgggggaacaacacttgaccagtgcgcatgtctctacgcatgagccggattagtcgtctaccattggtgggtcggaaac 14169619  T
Q  241 cagtgcgaaa 250  Q
    | ||||||||    
T  14169618 cggtgcgaaa 14169609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 126 - 224
Target Start/End: Complemental strand, 14853491 - 14853391
Alignment:
Q  126 caaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgc--ctctacacacgagccgaattagtcgtccatc 223  Q
    |||||||||| | | |||||||| |||||||||||||| |||||||||  |||| ||||| | ||||  |||||| || ||| || ||||||||||||||    
T  14853491 caaggatgtatccggggaataccagattcgattttcagggggaacaacttttggccagtgcgtatgcctctctactcatgagtcggattagtcgtccatc 14853392  T
Q  224 t 224  Q
    |    
T  14853391 t 14853391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 165 - 250
Target Start/End: Original strand, 29421303 - 29421388
Alignment:
Q  165 gggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaaccagtgcgaaa 250  Q
    |||||||||| |||| ||||| |||||||||||| || ||| |||| |||||||| |  | |||| | ||||||||||||||||||    
T  29421303 gggaacaacgcttgggcagtgagcatgcctctacgcatgagtcgaagtagtcgtctacatttggtagatcggaaaccagtgcgaaa 29421388  T

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Target: chr2; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 250
Target Start/End: Complemental strand, 20116696 - 20116612
Alignment:
Q  166 ggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaaccagtgcgaaa 250  Q
    |||||||||  ||| || || |||||||||||| || |||||| ||||| |||||| || || ||||||||||||| ||||||||    
T  20116696 ggaacaacgcatggccaatgcgcatgcctctacgcatgagccggattagccgtccacctttgatgggtcggaaaccggtgcgaaa 20116612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 141 - 216
Target Start/End: Complemental strand, 13026520 - 13026445
Alignment:
Q  141 ggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtc 216  Q
    |||||| ||| ||||||| ||||  ||||||| |||||| ||||| |||||||||||| || |||||| |||||||    
T  13026520 ggaatatcgggttcgattatcaggaggaacaatgattggccagtgcgcatgcctctacgcatgagccggattagtc 13026445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 207 - 250
Target Start/End: Original strand, 44023358 - 44023401
Alignment:
Q  207 cgaattagtcgtccatctatggtgggtcggaaaccagtgcgaaa 250  Q
    |||||||||||||||||| |||||||| ||||||| ||||||||    
T  44023358 cgaattagtcgtccatctttggtgggttggaaaccggtgcgaaa 44023401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 141 - 250
Target Start/End: Complemental strand, 18649135 - 18649026
Alignment:
Q  141 ggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaac 240  Q
    |||||||||||||||||| ||||  |||||||   |||| ||||| |||||||||||| || ||| || ||||||||  ||  | |||||||| ||||||    
T  18649135 ggaataccggattcgattctcaggaggaacaatatttgggcagtgcgcatgcctctacgcatgagtcggattagtcgctcacttttggtgggttggaaac 18649036  T
Q  241 cagtgcgaaa 250  Q
    |  |||||||    
T  18649035 cgttgcgaaa 18649026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 124 - 217
Target Start/End: Complemental strand, 21180440 - 21180347
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcg 217  Q
    |||||||| ||||| |  |||||||||||||||||  ||  | |||||||  |||| |||||  ||||||||||| ||||||||| ||||||||    
T  21180440 tccaaggacgtacccgaagaataccggattcgattcccatggagaacaacacttggccagtgcacatgcctctacgcacgagccggattagtcg 21180347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 152 - 240
Target Start/End: Complemental strand, 28525554 - 28525465
Alignment:
Q  152 ttcgattttcagagggaa-caacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaac 240  Q
    |||||||| ||| ||||| ||||  |||| ||||| |||||||||||| ||||||||| ||||||| |||| || |  ||||||||||||    
T  28525554 ttcgatttccagggggaaacaacacttggccagtgcgcatgcctctacgcacgagccggattagtcatccacctttaatgggtcggaaac 28525465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 141 - 242
Target Start/End: Complemental strand, 33634548 - 33634447
Alignment:
Q  141 ggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaac 240  Q
    |||||||||| |||||||  |||||| || |||| || | ||||| ||||||| || | ||||||||||||||||| || | || |||||| ||| ||||    
T  33634548 ggaataccgggttcgattcccagaggaaataacgtttagccagtgcgcatgccgctgcgcacgagccgaattagtcatctacctttggtggatcgaaaac 33634449  T
Q  241 ca 242  Q
    ||    
T  33634448 ca 33634447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 189 - 246
Target Start/End: Complemental strand, 34738394 - 34738337
Alignment:
Q  189 atgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaaccagtgc 246  Q
    |||||||||| |||||| || |||||||||||| | ||||| ||||||||||| ||||    
T  34738394 atgcctctacgcacgagtcggattagtcgtccaccaatggtaggtcggaaaccggtgc 34738337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 188 - 224
Target Start/End: Original strand, 25549772 - 25549808
Alignment:
Q  188 catgcctctacacacgagccgaattagtcgtccatct 224  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  25549772 catgcctctacgcacgagccggattagtcgtccatct 25549808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 134 - 250
Target Start/End: Original strand, 26176 - 26292
Alignment:
Q  134 tacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggt 233  Q
    |||||| ||||||| || |||||||| ||| |||||||||| |||| |||||||||||||||||| ||||||||| ||||||||||||    || || ||    
T  26176 tacctggggaatactgggttcgatttccagggggaacaacgcttggccagtgtgcatgcctctacgcacgagccggattagtcgtccacaattgatgagt 26275  T
Q  234 cggaaaccagtgcgaaa 250  Q
    |||||||||||||||||    
T  26276 cggaaaccagtgcgaaa 26292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 124 - 250
Target Start/End: Complemental strand, 42958 - 42832
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatc 223  Q
    |||||| ||||||||| |||||| ||| |||||||   || | |||||| | |||||||||| ||||||||||||||| |||||| |||||||| ||| |    
T  42958 tccaagaatgtacctggggaatatcgggttcgattcctagggagaacaatgcttggtcagtgcgcatgcctctacacatgagccggattagtcgcccacc 42859  T
Q  224 tatggtgggtcggaaaccagtgcgaaa 250  Q
    | |||||||||||||||| ||||||||    
T  42858 tttggtgggtcggaaaccggtgcgaaa 42832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 194 - 250
Target Start/End: Original strand, 9495 - 9551
Alignment:
Q  194 tctacacacgagccgaattagtcgtccatctatggtgggtcggaaaccagtgcgaaa 250  Q
    ||||| || ||||| ||||||||||||| || ||||||||| |||||| ||||||||    
T  9495 tctacgcatgagccaaattagtcgtccacctttggtgggtcagaaaccggtgcgaaa 9551  T

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Target: scaffold0029 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 141 - 250
Target Start/End: Original strand, 41044 - 41153
Alignment:
Q  141 ggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaac 240  Q
    |||||| ||| ||||||| |||  |||||||||  ||||||||||||||||||||||| ||||||||| |||||||| |||||| ||||| |||||||||    
T  41044 ggaatatcgggttcgattctcaaggggaacaacacttggtcagtgtgcatgcctctacgcacgagccggattagtcgcccatctttggtgagtcggaaac 41143  T
Q  241 cagtgcgaaa 250  Q
    | || |||||    
T  41144 cggttcgaaa 41153  T

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Target: scaffold0316 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 136 - 250
Target Start/End: Complemental strand, 1728 - 1614
Alignment:
Q  136 cctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcg 235  Q
    |||| |||||||| | |||||||| ||| ||||||||||||| | ||||| |||||||||||| || ||||| ||||||||| ||| || ||||||||||    
T  1728 cctggggaataccaggttcgatttccagggggaacaacgattagccagtgcgcatgcctctacgcatgagccaaattagtcgcccacctttggtgggtcg 1629  T
Q  236 gaaaccagtgcgaaa 250  Q
     ||||| ||||||||    
T  1628 aaaaccggtgcgaaa 1614  T

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Target: scaffold0002 (Bit Score: 47; Significance: 6e-18; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 124 - 250
Target Start/End: Original strand, 553 - 679
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatc 223  Q
    |||||||| ||||| | |||||||||| |||||||  ||| |||||||||  ||| |||||||||||||||||||  | |||||  ||||||||  || |    
T  553 tccaaggacgtacccggggaataccgggttcgattcgcagggggaacaacacttgatcagtgtgcatgcctctacgtatgagccagattagtcgctcacc 652  T
Q  224 tatggtgggtcggaaaccagtgcgaaa 250  Q
    | |||||||||||||||| ||||||||    
T  653 tttggtgggtcggaaaccggtgcgaaa 679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 124 - 250
Target Start/End: Original strand, 319405 - 319531
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatc 223  Q
    |||||||| ||| | | |||||||||| || |||||  || |||||||||| |||| ||||| |||| ||||||  || |||| | |||||||||||| |    
T  319405 tccaaggacgtatccggggaataccgggtttgatttctagggggaacaacgcttggccagtgcgcatccctctatgcatgagctggattagtcgtccacc 319504  T
Q  224 tatggtgggtcggaaaccagtgcgaaa 250  Q
    | ||||||| |||||||| ||||||||    
T  319505 tttggtggggcggaaaccggtgcgaaa 319531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 141 - 250
Target Start/End: Original strand, 6855 - 6964
Alignment:
Q  141 ggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaac 240  Q
    |||||||||| |||||||  ||| |||||||||  |||| ||||| |||||||||||| || |||||| ||||||||  || || |||||||||||||||    
T  6855 ggaataccgggttcgattcccagggggaacaacacttggccagtgcgcatgcctctacgcatgagccggattagtcgctcacctttggtgggtcggaaac 6954  T
Q  241 cagtgcgaaa 250  Q
    | ||||||||    
T  6955 cggtgcgaaa 6964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 141 - 250
Target Start/End: Complemental strand, 8810 - 8701
Alignment:
Q  141 ggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaac 240  Q
    |||||||||| |||||||  ||| |||||||||| |||| ||||| || ||||||||| || |||| | |||||||||||| || |||||||||||||||    
T  8810 ggaataccgggttcgattcccagggggaacaacgcttggccagtgcgcttgcctctacgcatgagctggattagtcgtccacctttggtgggtcggaaac 8711  T
Q  241 cagtgcgaaa 250  Q
      ||||||||    
T  8710 tggtgcgaaa 8701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 45; Significance: 9e-17; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 142 - 250
Target Start/End: Original strand, 224318 - 224426
Alignment:
Q  142 gaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaacc 241  Q
    ||||| ||| ||||| | |||| | ||| |||| ||| ||||||  ||| ||||||| ||||||||| ||||||||||||||| ||||||||||||||||    
T  224318 gaatatcgggttcgaatctcagggagaataacgtttgatcagtgcacatacctctacgcacgagccggattagtcgtccatctttggtgggtcggaaacc 224417  T
Q  242 agtgcgaaa 250  Q
     ||||||||    
T  224418 ggtgcgaaa 224426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 176 - 250
Target Start/End: Original strand, 186552 - 186626
Alignment:
Q  176 ttggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaaccagtgcgaaa 250  Q
    ||||||||||  ||||||||||| ||||||||| ||||||||| ||||| | |||||||||||||| ||| ||||    
T  186552 ttggtcagtgcacatgcctctacgcacgagccggattagtcgttcatctttagtgggtcggaaaccggtgtgaaa 186626  T

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Target: scaffold0376 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 124 - 250
Target Start/End: Original strand, 12653 - 12779
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatc 223  Q
    |||||||| || || | |||||||||| |||||||   ||  ||||||||| |||| |||||||||||||||||| ||||| ||| |||||||| ||| |    
T  12653 tccaaggacgtgcccggggaataccgggttcgattcagaggaggaacaacgcttggccagtgtgcatgcctctacgcacgaaccggattagtcgcccacc 12752  T
Q  224 tatggtgggtcggaaaccagtgcgaaa 250  Q
    | || |||||| |||||| ||||||||    
T  12753 tttgatgggtcagaaaccggtgcgaaa 12779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 152 - 250
Target Start/End: Complemental strand, 155809 - 155711
Alignment:
Q  152 ttcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaaccagtgcgaaa 250  Q
    |||||||  ||| |||||||||| ||||  |||| |||||||||||| ||||||||| |||||||| ||| || ||||||||||||| || ||||||||    
T  155809 ttcgattcccagggggaacaacgcttggctagtgcgcatgcctctacgcacgagccggattagtcgcccacctttggtgggtcggaagccggtgcgaaa 155711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 124 - 248
Target Start/End: Original strand, 68500 - 68621
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatc 223  Q
    |||||||| ||||| | | |||| ||| |||||||  ||| |||||||||| ||||   ||| |||||||||||| ||||||||| |||||||| ||| |    
T  68500 tccaaggacgtacccgggaaatatcgggttcgattcccagggggaacaacgcttgg---gtgcgcatgcctctacgcacgagccggattagtcgcccacc 68596  T
Q  224 tatggtgggtcggaaaccagtgcga 248  Q
    | |||||||||| ||||| ||||||    
T  68597 tttggtgggtcgaaaaccggtgcga 68621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0384 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 141 - 241
Target Start/End: Original strand, 5973 - 6072
Alignment:
Q  141 ggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaac 240  Q
    ||||||| || |||||||| ||| |||| ||||| |||| |||||  ||||||||||| || ||| ||||||||||||||| |  |||||||||||||||    
T  5973 ggaatactgggttcgatttccaggggga-caacgcttggccagtgcacatgcctctacgcatgagacgaattagtcgtccaccattggtgggtcggaaac 6071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 124 - 199
Target Start/End: Original strand, 8158 - 8232
Alignment:
Q  124 tccaaggatgtacctgtggaataccggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctaca 199  Q
    |||||||| ||||| | |||||||||| |||||||  || ||||||||||| |||| ||||| |||||||||||||    
T  8158 tccaaggacgtacccggggaataccgggttcgattccca-agggaacaacgcttggccagtgcgcatgcctctaca 8232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 246
Target Start/End: Original strand, 149396 - 149490
Alignment:
Q  152 ttcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaaccagtgc 246  Q
    ||||||| |||| |||||||||| |||  ||||||||||||||||||  |||||    |||||||| ||| | |||||||||| |||||| ||||    
T  149396 ttcgattctcagggggaacaacgcttgaccagtgtgcatgcctctacgtacgaggtagattagtcgcccaccaatggtgggtcagaaaccggtgc 149490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 250
Target Start/End: Complemental strand, 250099 - 250025
Alignment:
Q  176 ttggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaaccagtgcgaaa 250  Q
    |||| ||||| |||||||||||| ||||||||| ||||||||  |  || |||||||||||||| | ||||||||    
T  250099 ttggccagtgcgcatgcctctacgcacgagccggattagtcgctcgcctttggtgggtcggaaatcggtgcgaaa 250025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 148 - 241
Target Start/End: Original strand, 17397 - 17490
Alignment:
Q  148 cggattcgattttcagagggaacaacgattggtcagtgtgcatgcctctacacacgagccgaattagtcgtccatctatggtgggtcggaaacc 241  Q
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T  17397 cggattcgattctcaggggaaaaaatgcttgaccagtgcgcatgcttctacacacgagccggattagtcgcccaccattgatgggtcggaaacc 17490  T

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