View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13149_high_17 (Length: 287)

Name: NF13149_high_17
Description: NF13149
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13149_high_17
NF13149_high_17
[»] chr7 (52 HSPs)
chr7 (18-277)||(21278866-21279128)
chr7 (18-277)||(26015663-26015925)
chr7 (18-277)||(25876797-25877059)
chr7 (18-277)||(43246754-43247016)
chr7 (20-277)||(47065737-47065997)
chr7 (18-277)||(47779305-47779568)
chr7 (18-277)||(7900454-7900716)
chr7 (18-277)||(46321843-46322105)
chr7 (20-277)||(40995210-40995470)
chr7 (18-277)||(8203238-8203500)
chr7 (18-277)||(8215715-8215977)
chr7 (18-277)||(32541980-32542242)
chr7 (18-277)||(46923899-46924160)
chr7 (18-277)||(27324976-27325238)
chr7 (18-277)||(34591697-34591959)
chr7 (18-277)||(40705310-40705571)
chr7 (18-254)||(38875874-38876113)
chr7 (18-251)||(38283414-38283650)
chr7 (18-277)||(7790924-7791187)
chr7 (18-277)||(40994610-40994872)
chr7 (18-277)||(32662186-32662427)
chr7 (207-277)||(35924318-35924388)
chr7 (18-85)||(35924251-35924316)
chr7 (20-109)||(39597843-39597930)
chr7 (20-109)||(43775906-43775993)
chr7 (27-125)||(45870127-45870223)
chr7 (20-125)||(20492707-20492809)
chr7 (20-109)||(24980878-24980965)
chr7 (20-109)||(40862382-40862469)
chr7 (20-125)||(42436462-42436565)
chr7 (54-126)||(19021015-19021087)
chr7 (20-109)||(12847148-12847235)
chr7 (18-71)||(42095782-42095833)
chr7 (20-125)||(7883634-7883737)
chr7 (27-125)||(40305431-40305527)
chr7 (20-109)||(10594107-10594194)
chr7 (195-261)||(25765044-25765110)
chr7 (20-125)||(29042167-29042269)
chr7 (20-125)||(36688694-36688796)
chr7 (18-71)||(39074364-39074415)
chr7 (18-71)||(43047094-43047145)
chr7 (197-275)||(48642094-48642172)
chr7 (20-109)||(241705-241791)
chr7 (18-71)||(21874639-21874690)
chr7 (63-109)||(46101868-46101914)
chr7 (62-125)||(47540353-47540417)
chr7 (62-125)||(47546910-47546974)
chr7 (39-125)||(12428641-12428725)
chr7 (27-125)||(48641965-48642060)
chr7 (63-109)||(48874357-48874403)
chr7 (57-106)||(44709873-44709922)
chr7 (20-125)||(30173420-30173523)
[»] chr3 (52 HSPs)
chr3 (18-277)||(20048355-20048618)
chr3 (18-277)||(10999560-10999822)
chr3 (18-277)||(20835396-20835658)
chr3 (18-277)||(22781721-22781983)
chr3 (18-277)||(37971488-37971750)
chr3 (18-277)||(38871141-38871403)
chr3 (18-277)||(4515828-4516090)
chr3 (18-277)||(25710907-25711169)
chr3 (18-277)||(40585985-40586247)
chr3 (18-277)||(33712438-33712699)
chr3 (18-277)||(4044622-4044884)
chr3 (18-277)||(10841247-10841508)
chr3 (18-277)||(53974331-53974592)
chr3 (18-277)||(41069857-41070117)
chr3 (18-277)||(36430288-36430549)
chr3 (30-276)||(6268173-6268422)
chr3 (18-277)||(33966916-33967164)
chr3 (18-238)||(7156541-7156747)
chr3 (20-125)||(36885711-36885814)
chr3 (20-109)||(35039595-35039682)
chr3 (27-125)||(7680974-7681070)
chr3 (20-109)||(49779841-49779928)
chr3 (27-125)||(38145211-38145307)
chr3 (20-125)||(11123881-11123984)
chr3 (20-125)||(36232642-36232745)
chr3 (20-109)||(44354485-44354572)
chr3 (20-108)||(48584857-48584943)
chr3 (54-125)||(47098274-47098345)
chr3 (18-71)||(84409-84460)
chr3 (20-125)||(14279129-14279232)
chr3 (18-71)||(24395116-24395167)
chr3 (20-109)||(30418713-30418800)
chr3 (18-71)||(32236153-32236204)
chr3 (20-109)||(36841092-36841179)
chr3 (197-275)||(47098139-47098217)
chr3 (20-109)||(51662149-51662236)
chr3 (54-119)||(54556402-54556467)
chr3 (38-125)||(52812168-52812253)
chr3 (39-125)||(39627093-39627176)
chr3 (197-275)||(1774218-1774296)
chr3 (20-109)||(2613313-2613400)
chr3 (20-109)||(4596413-4596499)
chr3 (18-71)||(7679722-7679773)
chr3 (20-125)||(11095670-11095773)
chr3 (18-71)||(20657412-20657463)
chr3 (18-71)||(26090222-26090273)
chr3 (62-126)||(1774098-1774162)
chr3 (27-124)||(8947833-8947927)
chr3 (62-109)||(52343145-52343192)
chr3 (18-71)||(672088-672139)
chr3 (20-124)||(33392534-33392635)
chr3 (62-109)||(19941745-19941792)
[»] chr6 (24 HSPs)
chr6 (18-277)||(29630298-29630559)
chr6 (18-277)||(3094609-3094871)
chr6 (18-277)||(18893696-18893958)
chr6 (18-277)||(6625379-6625641)
chr6 (18-277)||(29122155-29122417)
chr6 (18-277)||(7141284-7141546)
chr6 (18-264)||(6167750-6167999)
chr6 (18-213)||(25335003-25335201)
chr6 (20-188)||(13889849-13890019)
chr6 (27-125)||(8811261-8811357)
chr6 (27-125)||(7081002-7081098)
chr6 (20-125)||(6925800-6925903)
chr6 (21-106)||(34085821-34085904)
chr6 (20-109)||(23350377-23350464)
chr6 (198-275)||(7081155-7081232)
chr6 (198-275)||(8811127-8811204)
chr6 (56-125)||(18024436-18024505)
chr6 (20-109)||(11369054-11369141)
chr6 (54-125)||(5714932-5715003)
chr6 (239-277)||(13889811-13889849)
chr6 (20-78)||(31091150-31091206)
chr6 (27-124)||(32173670-32173765)
chr6 (27-87)||(8525555-8525613)
chr6 (20-87)||(29623168-29623233)
[»] chr5 (40 HSPs)
chr5 (18-277)||(43518093-43518356)
chr5 (18-277)||(9065719-9065981)
chr5 (18-277)||(43293460-43293722)
chr5 (18-277)||(4155971-4156233)
chr5 (18-277)||(33280830-33281092)
chr5 (18-277)||(19034523-19034785)
chr5 (18-277)||(24559089-24559351)
chr5 (18-277)||(24600121-24600383)
chr5 (18-264)||(31527393-31527642)
chr5 (20-277)||(37865898-37866158)
chr5 (18-277)||(13145684-13145945)
chr5 (20-125)||(10666096-10666199)
chr5 (27-109)||(31484679-31484759)
chr5 (27-109)||(41881895-41881975)
chr5 (20-125)||(7338643-7338745)
chr5 (20-109)||(8232566-8232653)
chr5 (20-121)||(36294204-36294303)
chr5 (20-125)||(37274574-37274677)
chr5 (20-125)||(40738915-40739018)
chr5 (197-275)||(12189146-12189224)
chr5 (20-125)||(18522184-18522287)
chr5 (20-125)||(18864453-18864556)
chr5 (20-109)||(42437350-42437437)
chr5 (20-123)||(12189267-12189368)
chr5 (18-71)||(6469947-6469998)
chr5 (20-125)||(13210948-13211051)
chr5 (20-125)||(15272728-15272831)
chr5 (18-71)||(25084877-25084928)
chr5 (18-71)||(25142850-25142901)
chr5 (20-108)||(4621169-4621255)
chr5 (18-70)||(38760537-38760587)
chr5 (20-109)||(18978473-18978560)
chr5 (20-125)||(43548543-43548645)
chr5 (29-125)||(31498869-31498963)
chr5 (30-109)||(37340833-37340910)
chr5 (58-125)||(6245246-6245313)
chr5 (18-71)||(19617736-19617787)
chr5 (18-71)||(29920311-29920362)
chr5 (65-109)||(38768315-38768359)
chr5 (58-102)||(35319755-35319799)
[»] chr4 (52 HSPs)
chr4 (18-277)||(42723996-42724258)
chr4 (18-277)||(28406253-28406515)
chr4 (18-277)||(37234020-37234282)
chr4 (18-277)||(39540216-39540478)
chr4 (18-277)||(52913008-52913270)
chr4 (18-277)||(53874925-53875187)
chr4 (20-277)||(19873937-19874197)
chr4 (20-277)||(20434185-20434445)
chr4 (18-277)||(42348681-42348943)
chr4 (18-277)||(55215408-55215670)
chr4 (18-276)||(613844-614105)
chr4 (18-260)||(10541864-10542109)
chr4 (21-277)||(25857564-25857823)
chr4 (18-277)||(55219888-55220150)
chr4 (18-277)||(56362839-56363100)
chr4 (18-278)||(55183341-55183604)
chr4 (18-277)||(52839547-52839809)
chr4 (18-277)||(23895009-23895272)
chr4 (18-277)||(38291670-38291932)
chr4 (18-277)||(52307272-52307534)
chr4 (18-277)||(53035833-53036092)
chr4 (18-149)||(43830165-43830294)
chr4 (20-125)||(43458363-43458466)
chr4 (22-125)||(11682233-11682334)
chr4 (22-125)||(11690512-11690613)
chr4 (20-109)||(35339632-35339719)
chr4 (20-125)||(40430145-40430248)
chr4 (20-125)||(47467379-47467482)
chr4 (20-124)||(49298-49400)
chr4 (27-109)||(24034548-24034628)
chr4 (20-109)||(41202333-41202420)
chr4 (20-109)||(51322672-51322759)
chr4 (30-125)||(3026414-3026507)
chr4 (20-125)||(1522806-1522909)
chr4 (18-71)||(20737711-20737762)
chr4 (18-71)||(56018719-56018770)
chr4 (20-124)||(24897008-24897109)
chr4 (20-107)||(7318450-7318536)
chr4 (39-109)||(30217111-30217179)
chr4 (20-125)||(13962450-13962552)
chr4 (20-125)||(22301719-22301819)
chr4 (20-109)||(43621562-43621649)
chr4 (20-92)||(22847127-22847197)
chr4 (20-87)||(28803978-28804043)
chr4 (39-125)||(34159052-34159136)
chr4 (54-125)||(36851460-36851531)
chr4 (20-121)||(8713247-8713343)
chr4 (20-109)||(50561587-50561673)
chr4 (64-125)||(20293267-20293328)
chr4 (20-125)||(48990368-48990468)
chr4 (27-109)||(32932614-32932694)
chr4 (20-71)||(31709738-31709787)
[»] chr2 (34 HSPs)
chr2 (18-277)||(45505587-45505849)
chr2 (18-277)||(1481832-1482094)
chr2 (18-277)||(25853234-25853496)
chr2 (18-277)||(39697579-39697841)
chr2 (18-277)||(1520197-1520459)
chr2 (18-277)||(43577024-43577286)
chr2 (18-277)||(44143381-44143643)
chr2 (18-277)||(2390489-2390750)
chr2 (18-277)||(34202300-34202562)
chr2 (18-277)||(10638799-10639060)
chr2 (18-277)||(21657948-21658209)
chr2 (18-277)||(40811575-40811836)
chr2 (18-277)||(42342989-42343250)
chr2 (18-271)||(3178247-3178503)
chr2 (18-277)||(13195940-13196201)
chr2 (18-277)||(37094109-37094371)
chr2 (18-277)||(927085-927327)
chr2 (68-277)||(874953-875154)
chr2 (18-178)||(15011840-15012002)
chr2 (20-125)||(13480508-13480611)
chr2 (20-124)||(26170999-26171101)
chr2 (54-109)||(44456787-44456842)
chr2 (20-125)||(4331840-4331943)
chr2 (20-125)||(38629368-38629471)
chr2 (18-70)||(32551681-32551731)
chr2 (33-108)||(31569635-31569708)
chr2 (27-109)||(7722648-7722728)
chr2 (54-124)||(45443516-45443585)
chr2 (18-70)||(35895513-35895563)
chr2 (20-124)||(44798832-44798933)
chr2 (20-71)||(27980924-27980973)
chr2 (20-71)||(28067454-28067503)
chr2 (63-109)||(458584-458630)
chr2 (58-109)||(16313558-16313609)
[»] chr1 (49 HSPs)
chr1 (18-277)||(34270574-34270836)
chr1 (18-277)||(39569256-39569518)
chr1 (18-277)||(52044190-52044452)
chr1 (18-277)||(44721892-44722154)
chr1 (18-277)||(52024746-52025008)
chr1 (18-277)||(42948210-42948473)
chr1 (18-277)||(6653245-6653507)
chr1 (18-277)||(26150966-26151228)
chr1 (18-260)||(40400054-40400299)
chr1 (18-277)||(20581520-20581781)
chr1 (18-261)||(33010603-33010849)
chr1 (18-277)||(18909236-18909498)
chr1 (18-277)||(24317202-24317462)
chr1 (18-277)||(50727818-50728080)
chr1 (18-277)||(2138046-2138308)
chr1 (18-277)||(2482430-2482695)
chr1 (20-277)||(13942166-13942426)
chr1 (18-277)||(51677049-51677311)
chr1 (18-241)||(15932807-15933033)
chr1 (20-238)||(49823227-49823448)
chr1 (18-206)||(28852791-28852982)
chr1 (27-109)||(40498647-40498727)
chr1 (18-95)||(13240207-13240282)
chr1 (20-125)||(29922183-29922286)
chr1 (20-109)||(41712783-41712870)
chr1 (20-109)||(51002006-51002093)
chr1 (20-125)||(51776052-51776155)
chr1 (21-121)||(5672915-5673013)
chr1 (21-125)||(17605751-17605853)
chr1 (20-125)||(14290252-14290355)
chr1 (20-109)||(17474687-17474774)
chr1 (20-109)||(23444319-23444405)
chr1 (20-109)||(26307869-26307956)
chr1 (192-235)||(13240166-13240209)
chr1 (20-109)||(8114879-8114966)
chr1 (18-71)||(11173512-11173563)
chr1 (18-71)||(14247457-14247508)
chr1 (20-109)||(32086505-32086592)
chr1 (18-71)||(39982284-39982335)
chr1 (18-71)||(51290570-51290621)
chr1 (20-108)||(35273849-35273935)
chr1 (22-109)||(9640866-9640951)
chr1 (20-109)||(13146045-13146131)
chr1 (20-109)||(19247752-19247839)
chr1 (18-71)||(40536800-40536851)
chr1 (20-125)||(7009031-7009131)
chr1 (62-109)||(19514111-19514158)
chr1 (37-109)||(12601893-12601963)
chr1 (54-125)||(24527597-24527665)
[»] scaffold0391 (1 HSPs)
scaffold0391 (18-277)||(3896-4158)
[»] chr8 (49 HSPs)
chr8 (18-277)||(8376261-8376523)
chr8 (18-277)||(26122326-26122588)
chr8 (18-277)||(23357057-23357319)
chr8 (18-260)||(3137042-3137287)
chr8 (18-264)||(5988209-5988458)
chr8 (18-277)||(43664126-43664387)
chr8 (18-277)||(24822524-24822786)
chr8 (18-277)||(35605358-35605620)
chr8 (18-277)||(39365267-39365528)
chr8 (18-277)||(42512180-42512442)
chr8 (18-277)||(26290579-26290841)
chr8 (18-277)||(26303836-26304098)
chr8 (18-277)||(34564829-34565091)
chr8 (18-277)||(26337191-26337453)
chr8 (18-260)||(3032715-3032960)
chr8 (18-251)||(17122111-17122347)
chr8 (18-247)||(34917559-34917791)
chr8 (18-255)||(8656575-8656815)
chr8 (18-216)||(22439467-22439668)
chr8 (20-125)||(12722579-12722682)
chr8 (20-109)||(31793823-31793910)
chr8 (197-275)||(2828154-2828232)
chr8 (20-125)||(41942319-41942422)
chr8 (20-109)||(42687915-42688002)
chr8 (27-109)||(36057706-36057786)
chr8 (27-109)||(38168459-38168539)
chr8 (20-125)||(11266156-11266259)
chr8 (20-125)||(38945711-38945811)
chr8 (18-71)||(15839476-15839527)
chr8 (18-71)||(17601355-17601406)
chr8 (18-71)||(28885723-28885774)
chr8 (18-71)||(28909683-28909734)
chr8 (20-71)||(11587921-11587970)
chr8 (18-81)||(12713578-12713639)
chr8 (54-125)||(4005820-4005891)
chr8 (197-263)||(7969872-7969938)
chr8 (18-71)||(8013936-8013987)
chr8 (18-71)||(37578004-37578055)
chr8 (33-125)||(7969992-7970081)
chr8 (39-109)||(5552-5620)
chr8 (20-109)||(4229659-4229746)
chr8 (54-124)||(5347437-5347506)
chr8 (18-71)||(5599872-5599923)
chr8 (18-71)||(5640697-5640748)
chr8 (20-125)||(38234440-38234543)
chr8 (54-108)||(44025627-44025681)
chr8 (54-122)||(16571211-16571278)
chr8 (20-125)||(38460060-38460162)
chr8 (20-87)||(35329723-35329787)
[»] scaffold0368 (1 HSPs)
scaffold0368 (18-277)||(13883-14146)
[»] scaffold0438 (1 HSPs)
scaffold0438 (18-277)||(1916-2178)
[»] scaffold0007 (2 HSPs)
scaffold0007 (18-277)||(156917-157178)
scaffold0007 (20-109)||(200056-200143)
[»] scaffold0276 (2 HSPs)
scaffold0276 (18-277)||(13851-14112)
scaffold0276 (18-244)||(12541-12770)
[»] scaffold0248 (1 HSPs)
scaffold0248 (18-188)||(2915-3087)
[»] scaffold0896 (2 HSPs)
scaffold0896 (27-125)||(3708-3804)
scaffold0896 (198-275)||(3575-3651)
[»] scaffold0003 (1 HSPs)
scaffold0003 (62-125)||(365809-365872)
[»] scaffold0065 (1 HSPs)
scaffold0065 (18-71)||(38424-38475)
[»] scaffold0578 (1 HSPs)
scaffold0578 (62-109)||(8781-8828)


Alignment Details
Target: chr7 (Bit Score: 209; Significance: 1e-114; HSPs: 52)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 18 - 277
Target Start/End: Complemental strand, 21279128 - 21278866
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaac 117  Q
    |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||    
T  21279128 agttaatcatggttgcaccccaaaatgacaagattat--cctttcataaaatttgattttcaaaaagcatattccttcttttttggttacaccccaaaac 21279031  T
Q  118 ccctcttccaaaaccataattctccaatcgat----tgtgttctgcgaagatttttaaatccatactttctcacg-ccattcatgatttcaaagaaaatt 212  Q
    ||||||||||||||||||||||||||||||||    ||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||    
T  21279030 ccctcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaatt 21278931  T
Q  213 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttcttatgggttctc 277  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21278930 cgaagcaaattaggttagcaagtgttgttcttcaatcgattgtgtttttcttcttatgggttctc 21278866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 18 - 277
Target Start/End: Complemental strand, 26015925 - 26015663
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaac 117  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||    
T  26015925 agttaatcatggttgcaccccaaaatgacaagatta--ccctttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaac 26015828  T
Q  118 ccctcttccaaaaccataattctccaatcgat----tgtgttctgcgaagatttttaaatccatactttctcacg-ccattcatgatttcaaagaaaatt 212  Q
    || |||||||||||||||||||||||||||||    ||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  26015827 ccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagatttttaaaaccatactttctcacgtccattcatgatttcaaagaaaatt 26015728  T
Q  213 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttcttatgggttctc 277  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  26015727 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctc 26015663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 18 - 277
Target Start/End: Original strand, 25876797 - 25877059
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaac 117  Q
    ||||||||||||||||||||||||||||||| ||||  |||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  25876797 agttaatcatggttgcaccccaaaatgacaatatta--cccttttataaaatttgattttcaaaaagcatattccttctttcttggttacaccccaaaac 25876894  T
Q  118 ccctcttccaaaaccataattctccaatcgat----tgtgttctgcgaagatttttaaatccatactttctcacg-ccattcatgatttcaaagaaaatt 212  Q
    ||||||||||||| ||||||||||||||||||    ||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||| ||||||    
T  25876895 ccctcttccaaaatcataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaataaaatt 25876994  T
Q  213 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttcttatgggttctc 277  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25876995 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttcttatgggttctc 25877059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 18 - 277
Target Start/End: Complemental strand, 43247016 - 43246754
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaac 117  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||    
T  43247016 agttaatcatggttgcaccccaaaatgacaagatta--ccctttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaac 43246919  T
Q  118 ccctcttccaaaaccataattctccaatcgat----tgtgttctgcgaagatttttaaatccatactttctcacg-ccattcatgatttcaaagaaaatt 212  Q
    || |||||||||||||||||||||||||||||    ||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||    
T  43246918 ccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaatt 43246819  T
Q  213 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttcttatgggttctc 277  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  43246818 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttctttttatgggttctc 43246754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 20 - 277
Target Start/End: Complemental strand, 47065997 - 47065737
Alignment:
Q  20 ttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaaccc 119  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||||    
T  47065997 ttaatcatggttgcaccccaaaatgacaagatta--ccctttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaaccc 47065900  T
Q  120 ctcttccaaaaccataattctccaatcgat----tgtgttctgcgaagatttttaaatccatactttctcacg-ccattcatgatttcaaagaaaattcg 214  Q
     |||||||||||||||||||||||||||||    ||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||    
T  47065899 ttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaattcg 47065800  T
Q  215 aagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttcttatgggttctc 277  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  47065799 aagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctc 47065737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 18 - 277
Target Start/End: Complemental strand, 47779568 - 47779305
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaac 117  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47779568 agttaatcatggttgcaccccaaaatgacaagatta--ccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaac 47779471  T
Q  118 ccctcttccaaaaccataattctcca----atcgattgtgttctgcgaagatttttaaatccatactttctcacg-ccattcatgatttcaaagaaaatt 212  Q
    ||||||||||||||||||||||| ||    ||||||||||||||||||||||||| |||  |||| ||||||||| ||||| ||||||||||||||||||    
T  47779470 ccctcttccaaaaccataattctacaatcgatcgattgtgttctgcgaagattttcaaaatcatattttctcacgtccatttatgatttcaaagaaaatt 47779371  T
Q  213 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtg-tttttcttcttatgggttctc 277  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  47779370 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgttttttcttcttatgggttctc 47779305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 18 - 277
Target Start/End: Original strand, 7900454 - 7900716
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaac 117  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||    
T  7900454 agttaatcatggttgcaccccaaaatgacaagatta--ccctttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaac 7900551  T
Q  118 ccctcttccaaaaccataattctccaatcgat----tgtgttctgcgaagatttttaaatccatactttctcacg-ccattcatgatttcaaagaaaatt 212  Q
    || |||||||||||||||||||||||||||||    ||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||    
T  7900552 ccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaatt 7900651  T
Q  213 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttcttatgggttctc 277  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  7900652 cgaagcaaatcaagttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctc 7900716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 18 - 277
Target Start/End: Complemental strand, 46322105 - 46321843
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaac 117  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||    
T  46322105 agttaatcatggttgcaccccaaaatgacaagatta--ccctttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaac 46322008  T
Q  118 ccctcttccaaaaccataattctccaatcgat----tgtgttctgcgaagatttttaaatccatactttctcacg-ccattcatgatttcaaagaaaatt 212  Q
    || |||||||||||||||||||||||||||||    ||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||    
T  46322007 ccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaatt 46321908  T
Q  213 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttcttatgggttctc 277  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  46321907 cgaagcaaatcaggttagcaagtgttgttcttgaatcgattgtgtttttcttgttatgggttctc 46321843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 20 - 277
Target Start/End: Original strand, 40995210 - 40995470
Alignment:
Q  20 ttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaaccc 119  Q
    |||||||||||||||||||||||||| |||||||  |||||||||||||||||||| |||||||||||||||||||||| |||||||||| |||||||||    
T  40995210 ttaatcatggttgcaccccaaaatgataagatta--ccctttcataaaatttgattatcaaaaagcatattccttcttttttggttacaccccaaaaccc 40995307  T
Q  120 ctcttccaaaaccataattctccaatcgat----tgtgttctgcgaagatttttaaatccatactttctcacg-ccattcatgatttcaaagaaaattcg 214  Q
     |||||||||||||||||||||||||||||    ||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||    
T  40995308 ttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaattcg 40995407  T
Q  215 aagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttcttatgggttctc 277  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  40995408 aagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctc 40995470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 18 - 277
Target Start/End: Complemental strand, 8203500 - 8203238
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaac 117  Q
    |||||||||||||||||| |||||||||||||||||  |||||||||||||||||||||||||||| | |||||||||||| |||||||||| |||||||    
T  8203500 agttaatcatggttgcactccaaaatgacaagatta--ccctttcataaaatttgattttcaaaaaacctattccttcttttttggttacaccccaaaac 8203403  T
Q  118 ccctcttccaaaaccataattctccaatcgat----tgtgttctgcgaagatttttaaatccatactttctcacg-ccattcatgatttcaaagaaaatt 212  Q
    |||| |||||||||||||||||||||||||||    ||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||    
T  8203402 cccttttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaatt 8203303  T
Q  213 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttcttatgggttctc 277  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  8203302 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctc 8203238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 18 - 277
Target Start/End: Complemental strand, 8215977 - 8215715
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaac 117  Q
    |||||||||||||||||| |||||||||||||||||  |||||||||||||||||||||||||||| | |||||||||||| |||||||||| |||||||    
T  8215977 agttaatcatggttgcactccaaaatgacaagatta--ccctttcataaaatttgattttcaaaaaacctattccttcttttttggttacaccccaaaac 8215880  T
Q  118 ccctcttccaaaaccataattctccaatcgat----tgtgttctgcgaagatttttaaatccatactttctcacg-ccattcatgatttcaaagaaaatt 212  Q
    |||| |||||||||||||||||||||||||||    ||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||    
T  8215879 cccttttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaatt 8215780  T
Q  213 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttcttatgggttctc 277  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  8215779 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctc 8215715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 18 - 277
Target Start/End: Complemental strand, 32542242 - 32541980
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaac 117  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||    
T  32542242 agttaatcatggttgcaccccaaaatgacaagatta--ccctttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaac 32542145  T
Q  118 ccctcttccaaaaccataattctccaatcgat----tgtgttctgcgaagatttttaaatccatactttctcacg-ccattcatgatttcaaagaaaatt 212  Q
    || |||||||||||||||||||||||||||||    |||||||| |||||||||| ||| ||||||||| ||||| ||||||||||||||||||||||||    
T  32542144 ccttcttccaaaaccataattctccaatcgatcgattgtgttctacgaagattttcaaaaccatactttttcacgtccattcatgatttcaaagaaaatt 32542045  T
Q  213 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttcttatgggttctc 277  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  32542044 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctc 32541980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 18 - 277
Target Start/End: Original strand, 46923899 - 46924160
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaac 117  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||    
T  46923899 agttaatcatggttgcaccccaaaatgacaagatta--ccctttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaac 46923996  T
Q  118 ccctcttccaaaaccataattctcca----atcgattgtgttctgcgaagatttttaaatccatactttctcacg-ccattcatgatttcaaagaaaatt 212  Q
    || |||||||||||||||||||||||    ||||||||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||    
T  46923997 ccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaatt 46924096  T
Q  213 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttcttatgggttctc 277  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||    
T  46924097 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtg-ttttcttgttatgggttctc 46924160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 18 - 277
Target Start/End: Original strand, 27324976 - 27325238
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaac 117  Q
    ||||||| |||||||||| ||||||||| ||||||||  ||||||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||    
T  27324976 agttaattatggttgcactccaaaatgataagattat--cctttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaac 27325073  T
Q  118 ccctcttccaaaaccataattctccaatcgat----tgtgttctgcgaagatttttaaatccatactttctcacg-ccattcatgatttcaaagaaaatt 212  Q
    || |||| ||||||||||||||||||||||||    ||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||    
T  27325074 ccttctttcaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaatt 27325173  T
Q  213 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttcttatgggttctc 277  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  27325174 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctc 27325238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 18 - 277
Target Start/End: Original strand, 34591697 - 34591959
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaac 117  Q
    ||||||||||||||||||| |||||||||||||||||  ||||||||||||||||||||||||||||| |||||||| ||| || ||||||| |||||||    
T  34591697 agttaatcatggttgcacctcaaaatgacaagattat--cctttcataaaatttgattttcaaaaagcctattccttttttttttgttacaccccaaaac 34591794  T
Q  118 ccctcttccaaaaccataattctccaatcgat----tgtgttctgcgaagatttttaaatccatactttctcacg-ccattcatgatttcaaagaaaatt 212  Q
    || |||||||||||||||||||||||||||||    ||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||    
T  34591795 ccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaatt 34591894  T
Q  213 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttcttatgggttctc 277  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||    
T  34591895 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttgtgggttctc 34591959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 18 - 277
Target Start/End: Complemental strand, 40705571 - 40705310
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaac 117  Q
    |||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||| ||||||||| || |||||||||| |||||||    
T  40705571 agttaatcatggttgcaccccaaaatgacaagattg--ccctttcataaaatttgattttcaaaaagcctattccttcatt-ttggttacaccccaaaac 40705475  T
Q  118 ccctcttccaaaaccataattctccaatcgat----tgtgttctgcgaagatttttaaatccatactttctcacg-ccattcatgatttcaaagaaaatt 212  Q
    || |||||||||||||||||||||||||||||    ||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||    
T  40705474 ccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaatt 40705375  T
Q  213 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttcttatgggttctc 277  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||    
T  40705374 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttgtcttgttatgggttctc 40705310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 18 - 254
Target Start/End: Complemental strand, 38876113 - 38875874
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaac 117  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||    
T  38876113 agttaatcatggttgcaccccaaaatgacaagatta--ccctttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaac 38876016  T
Q  118 ccctcttccaaaaccataattctccaatcg----attgtgttctgcgaagatttttaaatccatactttctcacg-ccattcatgatttcaaagaaaatt 212  Q
    || |||||||||||||||||||||||||||    ||||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||    
T  38876015 ccttcttccaaaaccataattctccaatcgatcaattgtgttctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaatt 38875916  T
Q  213 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 254  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  38875915 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 38875874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 18 - 251
Target Start/End: Complemental strand, 38283650 - 38283414
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaac 117  Q
    ||||||||||||||||||||||||||||||| ||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  38283650 agttaatcatggttgcaccccaaaatgacaatatta--ccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacatcccaaaac 38283553  T
Q  118 ccctcttccaaaaccataattctccaat----cgattgtgttctgcgaagatttttaaatccatactttctcacg-ccattcatgatttcaaagaaaatt 212  Q
    || |||||||||||||||||||||||||    ||||||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||    
T  38283552 ccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaatt 38283453  T
Q  213 cgaagcaaatcaggttagcaagtgttgttcttcaatcga 251  Q
    |||||||||||||||||||||||||||||||||||||||    
T  38283452 cgaagcaaatcaggttagcaagtgttgttcttcaatcga 38283414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 18 - 277
Target Start/End: Original strand, 7790924 - 7791187
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttg-gttacactccaaaa 116  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||| || |||||||||||| ||  ||||||| ||||||    
T  7790924 agttaatcatggttgcaccccaaaatgacaagatta--ccctttcataaaatttgattttcaaaatgcctattccttcttttttttgttacaccccaaaa 7791021  T
Q  117 cccctcttccaaaaccataattctccaatcgat----tgtgttctgcgaagatttttaaatccatactttctcacg-ccattcatgatttcaaagaaaat 211  Q
      |||||||||||||||||||||||||||||||    ||||||||||||||||||| ||| ||||||||||||||| |||||||||||||||||| ||||    
T  7791022 atcctcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagcaaat 7791121  T
Q  212 tcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttcttatgggttctc 277  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  7791122 tcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgagttctc 7791187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 18 - 277
Target Start/End: Complemental strand, 40994872 - 40994610
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaac 117  Q
    |||||||||||||||||||  ||||| || |||||||  ||||| ||||||||||||||||||||||  |||||||||||| |||||||||  |||||||    
T  40994872 agttaatcatggttgcaccataaaataacgagattat--ccttttataaaatttgattttcaaaaagtctattccttcttttttggttacatcccaaaac 40994775  T
Q  118 ccctcttccaaaaccataattctccaatcgat----tgtgttctgcgaagatttttaaatccatactttctcacgc-cattcatgatttcaaagaaaatt 212  Q
    || |||||||||||||||||||||||||||||    ||||||||||||||||||| ||| |||||||||||||||  ||||||||||||| |||||||||    
T  40994774 ccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgttcattcatgatttccaagaaaatt 40994675  T
Q  213 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttcttatgggttctc 277  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  40994674 cgaagcaaaccaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgagttctc 40994610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 18 - 277
Target Start/End: Complemental strand, 32662427 - 32662186
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaac 117  Q
    ||||||||||||||||||||||||||||||||||||  || ||||||||||||||||||||||||||  |||||||||||| |||||||||| |||||||    
T  32662427 agttaatcatggttgcaccccaaaatgacaagatta--ccttttcataaaatttgattttcaaaaagtctattccttcttttttggttacaccccaaaac 32662330  T
Q  118 ccctcttccaaaaccataattctccaatcgattgtgttctgcgaagatttttaaatccatactttctcacg-ccattcatgatttcaaagaaaattcgaa 216  Q
    || ||||||||||||||||||||                 ||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||||    
T  32662329 ccttcttccaaaaccataattct-----------------gcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaattcgaa 32662247  T
Q  217 gcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttcttatgggttctc 277  Q
    |||||||| |||||||||||||||||||||||| |||||||||||| | ||||||||||||    
T  32662246 gcaaatcatgttagcaagtgttgttcttcaatcaattgtgtttttcctgttatgggttctc 32662186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 207 - 277
Target Start/End: Original strand, 35924318 - 35924388
Alignment:
Q  207 aaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttcttatgggttctc 277  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||    
T  35924318 aaaattcgaaacaaatcaggttagcaagtgttgttcttcaatcgattgcgtttttcttgttatgggttctc 35924388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 18 - 85
Target Start/End: Original strand, 35924251 - 35924316
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagc 85  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  35924251 agttaatcatggttgcaccccaaaatgacaagat--taccctttcataaaatttgattttcaaaaagc 35924316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 20 - 109
Target Start/End: Complemental strand, 39597930 - 39597843
Alignment:
Q  20 ttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacac 109  Q
    |||||| |||||||||||||||||||||| |||||  ||| ||||||||||| ||||||||||||||| |||||| ||||||||||||||    
T  39597930 ttaatcctggttgcaccccaaaatgacaaaattat--cctgtcataaaatttaattttcaaaaagcatcttccttttttcttggttacac 39597843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 20 - 109
Target Start/End: Original strand, 43775906 - 43775993
Alignment:
Q  20 ttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacac 109  Q
    |||||| ||||||||||||||||||| || |||||  ||||||||||||||| ||||||||||||||| |||||| ||||||||||||||    
T  43775906 ttaatcctggttgcaccccaaaatgataaaattat--cctttcataaaatttaattttcaaaaagcatcttccttttttcttggttacac 43775993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 27 - 125
Target Start/End: Complemental strand, 45870223 - 45870127
Alignment:
Q  27 tggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaacccctcttc 125  Q
    |||||||||| ||||||||||| |||||  |||| |||||||||| ||||||||||||||| |||||| |||||||||||||| | |||| ||||||||    
T  45870223 tggttgcacctcaaaatgacaaaattat--ccttccataaaatttaattttcaaaaagcatcttccttttttcttggttacaccctaaaatccctcttc 45870127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 20 - 125
Target Start/End: Original strand, 20492707 - 20492809
Alignment:
Q  20 ttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaaccc 119  Q
    |||||| |||||||||||||||||||||| ||  ||||||| |||||||||| |||||| |||||||| |||||| |||||||||||||| | |||| ||    
T  20492707 ttaatcctggttgcaccccaaaatgacaaaat--tacccttccataaaatttaattttc-aaaagcatcttccttttttcttggttacaccctaaaatcc 20492803  T
Q  120 ctcttc 125  Q
    ||||||    
T  20492804 ctcttc 20492809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 20 - 109
Target Start/End: Original strand, 24980878 - 24980965
Alignment:
Q  20 ttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacac 109  Q
    |||||| ||||||||||| |||||||||| |||||  |||| |||||||||| ||||||||||||||| |||||| ||||||||||||||    
T  24980878 ttaatcctggttgcaccctaaaatgacaaaattat--ccttccataaaatttaattttcaaaaagcatcttccttttttcttggttacac 24980965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 20 - 109
Target Start/End: Original strand, 40862382 - 40862469
Alignment:
Q  20 ttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacac 109  Q
    |||||| || |||||||| |||||||||| |||||  ||||||||||||||| ||||||||||||||| |||||| ||||||||||||||    
T  40862382 ttaatcctgattgcaccctaaaatgacaaaattat--cctttcataaaatttaattttcaaaaagcatcttccttttttcttggttacac 40862469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 20 - 125
Target Start/End: Complemental strand, 42436565 - 42436462
Alignment:
Q  20 ttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaaccc 119  Q
    |||||| ||| |||||||||||||||||||||||  ||||| ||||||||||  |||||||||||||| ||| || |||||||||||||| | |||| ||    
T  42436565 ttaatcctggctgcaccccaaaatgacaagatta--cccttccataaaatttagttttcaaaaagcatcttcattttttcttggttacaccctaaaatcc 42436468  T
Q  120 ctcttc 125  Q
    ||||||    
T  42436467 ctcttc 42436462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 54 - 126
Target Start/End: Complemental strand, 19021087 - 19021015
Alignment:
Q  54 taccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaacccctcttcc 126  Q
    |||||||||||||||||||||||||||||||  | |||||| ||| |||||||||| |||||||| |||||||    
T  19021087 taccctttcataaaatttgattttcaaaaagtctcttccttattttttggttacaccccaaaacctctcttcc 19021015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 109
Target Start/End: Complemental strand, 12847235 - 12847148
Alignment:
Q  20 ttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacac 109  Q
    |||||| ||||||||| ||||||||| || ||||  ||||| |||||||||| ||||||||||||||| || ||| ||||||||||||||    
T  12847235 ttaatcctggttgcactccaaaatgataaaatta--cccttccataaaatttaattttcaaaaagcatctttcttttttcttggttacac 12847148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 71
Target Start/End: Complemental strand, 42095833 - 42095782
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaattt 71  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  42095833 agttaatcatggttgcaccccaaaatgacaagat--taccctttcataaaattt 42095782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 125
Target Start/End: Complemental strand, 7883737 - 7883634
Alignment:
Q  20 ttaatcatggttgcacccc-aaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaacc 118  Q
    |||||| |||||||||||| ||||||| || ||||  |||||||||||||||  ||||||||||||||| |||||| |||||||| ||||| | |||| |    
T  7883737 ttaatcctggttgcacccccaaaatgaaaaaatta--ccctttcataaaatta-attttcaaaaagcatcttccttttttcttgggtacaccctaaaatc 7883641  T
Q  119 cctcttc 125  Q
    |||||||    
T  7883640 cctcttc 7883634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 27 - 125
Target Start/End: Complemental strand, 40305527 - 40305431
Alignment:
Q  27 tggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaacccctcttc 125  Q
    ||||||||||  |||||||||| ||||  |||||||| ||||||| |||||||||| |||| | |||| |||||||||||||| | |||| ||||||||    
T  40305527 tggttgcacctaaaaatgacaaaatta--ccctttcaaaaaatttaattttcaaaatgcatctgccttttttcttggttacaccctaaaatccctcttc 40305431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 20 - 109
Target Start/End: Original strand, 10594107 - 10594194
Alignment:
Q  20 ttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacac 109  Q
    |||||| ||||||||||||||||| |||  ||||   |||| |||||||||| ||||| ||||||||| |||||| ||||||||||||||    
T  10594107 ttaatcctggttgcaccccaaaataacagaattaa--ccttccataaaatttaatttttaaaaagcatcttccttttttcttggttacac 10594194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 195 - 261
Target Start/End: Original strand, 25765044 - 25765110
Alignment:
Q  195 atgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgttttt 261  Q
    ||||||||||||||||||||||||| || ||||||||| ||  |||||||||||||| | |||||||    
T  25765044 atgatttcaaagaaaattcgaagcagataaggttagcatgttgtgttcttcaatcgactatgttttt 25765110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 20 - 125
Target Start/End: Original strand, 29042167 - 29042269
Alignment:
Q  20 ttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaaccc 119  Q
    |||||| | |||||||| ||||||||||| |||||  ||||||||||||||  |||||||| |||||| ||| || |||||||||||||| | |||| ||    
T  29042167 ttaatcctagttgcacctcaaaatgacaaaattat--cctttcataaaatta-attttcaacaagcatcttcattttttcttggttacaccctaaaatcc 29042263  T
Q  120 ctcttc 125  Q
    ||||||    
T  29042264 ctcttc 29042269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 20 - 125
Target Start/End: Complemental strand, 36688796 - 36688694
Alignment:
Q  20 ttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaaccc 119  Q
    |||||| | |||||| | ||||||||||| |||||  |||| |||||||||  ||||||||||||||| |||||| |||||||||||||| | |||| ||    
T  36688796 ttaatccttgttgcatctcaaaatgacaaaattat--ccttccataaaatta-attttcaaaaagcatcttccttttttcttggttacaccctaaaatcc 36688700  T
Q  120 ctcttc 125  Q
    ||||||    
T  36688699 ctcttc 36688694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 71
Target Start/End: Complemental strand, 39074415 - 39074364
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaattt 71  Q
    |||||||||||||||||||| |||||||||||||  ||||||||||||||||||    
T  39074415 agttaatcatggttgcaccctaaaatgacaagat--taccctttcataaaattt 39074364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 71
Target Start/End: Complemental strand, 43047145 - 43047094
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaattt 71  Q
    |||||||||||||||||||| |||||||||||||  ||||||||||||||||||    
T  43047145 agttaatcatggttgcaccctaaaatgacaagat--taccctttcataaaattt 43047094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 197 - 275
Target Start/End: Original strand, 48642094 - 48642172
Alignment:
Q  197 gatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttcttatgggttc 275  Q
    |||||||||||||||||||||||  | ||||||| ||||  |||||||||||||||| | |||||||| |||| |||||    
T  48642094 gatttcaaagaaaattcgaagcatgtgaggttagtaagttgtgttcttcaatcgattatatttttcttgttattggttc 48642172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 109
Target Start/End: Original strand, 241705 - 241791
Alignment:
Q  20 ttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacac 109  Q
    ||||||||| |||||||  ||||||| || ||||  ||||| |||||||||  ||||||||||||||| |||||| ||||||||||||||    
T  241705 ttaatcatgcttgcaccttaaaatgataaaatta--cccttccataaaatta-attttcaaaaagcatcttccttttttcttggttacac 241791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 71
Target Start/End: Complemental strand, 21874690 - 21874639
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaattt 71  Q
    |||||||||||||||||||| ||||||||||||||||   ||||||||||||||    
T  21874690 agttaatcatggttgcaccctaaaatgacaagattat--tctttcataaaattt 21874639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 63 - 109
Target Start/End: Original strand, 46101868 - 46101914
Alignment:
Q  63 ataaaatttgattttcaaaaagcatattccttctttcttggttacac 109  Q
    ||||||||| ||||||||||||||| |||||| ||||||||||||||    
T  46101868 ataaaatttaattttcaaaaagcatcttccttttttcttggttacac 46101914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 62 - 125
Target Start/End: Original strand, 47540353 - 47540417
Alignment:
Q  62 cataaaatttgattttcaaaaagcatattcc-ttctttcttggttacactccaaaacccctcttc 125  Q
    |||||||||| ||||||||||||||| |||| || |||||||||||||| | |||| ||||||||    
T  47540353 cataaaatttaattttcaaaaagcatcttcctttttttcttggttacaccctaaaatccctcttc 47540417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 62 - 125
Target Start/End: Original strand, 47546910 - 47546974
Alignment:
Q  62 cataaaatttgattttcaaaaagcatattcc-ttctttcttggttacactccaaaacccctcttc 125  Q
    |||||||||| ||||||||||||||| |||| || |||||||||||||| | |||| ||||||||    
T  47546910 cataaaatttaattttcaaaaagcatcttcctttttttcttggttacaccctaaaatccctcttc 47546974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 39 - 125
Target Start/End: Original strand, 12428641 - 12428725
Alignment:
Q  39 aaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaacccctcttc 125  Q
    |||||||||| |||||  |||| ||| |||||| ||||| ||||| ||| |||||| |||||||||||||| | |||| ||||||||    
T  12428641 aaaatgacaaaattat--ccttccatcaaatttaatttttaaaaaacatcttccttttttcttggttacaccctaaaatccctcttc 12428725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 27 - 125
Target Start/End: Original strand, 48641965 - 48642060
Alignment:
Q  27 tggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaacccctcttc 125  Q
    ||||| |||||||||| ||||| ||||  | |||||||| ||||| ||||| ||||||||| || |||||||||||||||||  | ||||| |||||||    
T  48641965 tggttacaccccaaaacgacaaaatta--ctctttcatagaattt-atttttaaaaagcatttttcttctttcttggttacatcctaaaactcctcttc 48642060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 109
Target Start/End: Complemental strand, 48874403 - 48874357
Alignment:
Q  63 ataaaatttgattttcaaaaagcatattccttctttcttggttacac 109  Q
    ||||||||| ||||||||||||||| ||| || ||||||||||||||    
T  48874403 ataaaatttaattttcaaaaagcatcttcattttttcttggttacac 48874357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 57 - 106
Target Start/End: Complemental strand, 44709922 - 44709873
Alignment:
Q  57 cctttcataaaatttgattttcaaaaagcatattccttctttcttggtta 106  Q
    ||||| ||||||||| ||||||||||||||| ||| || |||||||||||    
T  44709922 ccttttataaaatttaattttcaaaaagcatcttcattttttcttggtta 44709873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 125
Target Start/End: Complemental strand, 30173523 - 30173420
Alignment:
Q  20 ttaatcatggttgcaccccaaaatgacaagattataccctttc-ataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaacc 118  Q
    |||||| ||||||||   ||||||||||| ||||   |||||| ||||||||| ||||||||||| ||| |||||| ||| || ||||||| | |||| |    
T  30173523 ttaatcttggttgcatttcaaaatgacaaaatta---cctttctataaaatttaattttcaaaaaacatcttccttttttttttgttacaccctaaaatc 30173427  T
Q  119 cctcttc 125  Q
    |||||||    
T  30173426 cctcttc 30173420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 206; Significance: 1e-113; HSPs: 52)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 18 - 277
Target Start/End: Original strand, 20048355 - 20048618
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaac 117  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20048355 agttaatcatggttgcaccccaaaatgacaagatta--ccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaac 20048452  T
Q  118 ccctcttccaaaaccataattctcca----atcgattgtgttctgcgaagatttttaaatccatactttctcacg-ccattcatgatttcaaagaaaatt 212  Q
    ||||||||||||||||||||||| ||    ||||||||||||||||||||||||| |||  |||||||||||||| ||||||||||||||||||||||||    
T  20048453 ccctcttccaaaaccataattctacaatcgatcgattgtgttctgcgaagattttcaaaatcatactttctcacgtccattcatgatttcaaagaaaatt 20048552  T
Q  213 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtg-tttttcttcttatgggttctc 277  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  20048553 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgttttttcttcttatgggttctc 20048618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 18 - 277
Target Start/End: Complemental strand, 10999822 - 10999560
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaac 117  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  10999822 agttaatcatggttgcaccccaaaatgacaagatta--ccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacatcccaaaac 10999725  T
Q  118 ccctcttccaaaaccataattctccaat----cgattgtgttctgcgaagatttttaaatccatactttctcacg-ccattcatgatttcaaagaaaatt 212  Q
    ||||||||||||||||||||||| ||||    ||||||||||||||||||| ||| ||| ||||||||||||||| ||||||||||||||||||||||||    
T  10999724 ccctcttccaaaaccataattctgcaatagatcgattgtgttctgcgaagaatttcaaaaccatactttctcacgtccattcatgatttcaaagaaaatt 10999625  T
Q  213 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttcttatgggttctc 277  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  10999624 cgaagcaaatcaggttagcaagtgttgttcttcaatcaattgtgtttttcttcttatgggttctc 10999560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 18 - 277
Target Start/End: Complemental strand, 20835658 - 20835396
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaac 117  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||    
T  20835658 agttaatcatggttgcaccccaaaatgacaagatta--ccctttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaac 20835561  T
Q  118 ccctcttccaaaaccataattctccaatcgat----tgtgttctgcgaagatttttaaatccatactttctcacg-ccattcatgatttcaaagaaaatt 212  Q
    || |||||||||||||||||||||||||||||    ||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||    
T  20835560 ccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaatt 20835461  T
Q  213 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttcttatgggttctc 277  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  20835460 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctc 20835396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 18 - 277
Target Start/End: Complemental strand, 22781983 - 22781721
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaac 117  Q
    ||||||||||||||||||| ||||||||||||||||  |||||||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||    
T  22781983 agttaatcatggttgcaccacaaaatgacaagatta--ccctttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaac 22781886  T
Q  118 ccctcttccaaaaccataattctccaatcgat----tgtgttctgcgaagatttttaaatccatactttctcacg-ccattcatgatttcaaagaaaatt 212  Q
    || |||||||||||||||||||||||||||||    ||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||    
T  22781885 ccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaatt 22781786  T
Q  213 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttcttatgggttctc 277  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  22781785 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctc 22781721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 18 - 277
Target Start/End: Complemental strand, 37971750 - 37971488
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaac 117  Q
    |||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||| ||||| |||||| |||||||||| |||||||    
T  37971750 agttaatcatggttgcaccccaaaatgacaagattat--cctttcataaaatttgattttcaaaaagcctattcattcttttttggttacaccccaaaac 37971653  T
Q  118 ccctcttccaaaaccataattctccaatcgat----tgtgttctgcgaagatttttaaatccatactttctcacg-ccattcatgatttcaaagaaaatt 212  Q
    || |||||||||||||||||||||||||||||    ||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||    
T  37971652 ccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttaaaaaccatactttctcacgtccattcatgatttcaaagaaaatt 37971553  T
Q  213 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttcttatgggttctc 277  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  37971552 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctc 37971488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 18 - 277
Target Start/End: Original strand, 38871141 - 38871403
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaac 117  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||    
T  38871141 agttaatcatggttgcaccccaaaatgacaagatta--ccctttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaac 38871238  T
Q  118 ccctcttccaaaaccataattctccaatcgat----tgtgttctgcgaagatttttaaatccatactttctcacg-ccattcatgatttcaaagaaaatt 212  Q
    |  |||||||||||||||||||||||||||||    ||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||    
T  38871239 cattcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaatt 38871338  T
Q  213 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttcttatgggttctc 277  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  38871339 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttctttttatgggttctc 38871403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 18 - 277
Target Start/End: Complemental strand, 4516090 - 4515828
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaac 117  Q
    |||||||||||||||||||| |||||||||||||||  |||||||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||    
T  4516090 agttaatcatggttgcaccctaaaatgacaagatta--ccctttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaac 4515993  T
Q  118 ccctcttccaaaaccataattctccaatcgatt----gtgttctgcgaagatttttaaatccatactttctcacg-ccattcatgatttcaaagaaaatt 212  Q
    |  ||||||||||||||||||||||||||||||    |||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||    
T  4515992 ctttcttccaaaaccataattctccaatcgattcattgtgttctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaatt 4515893  T
Q  213 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttcttatgggttctc 277  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  4515892 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctc 4515828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 18 - 277
Target Start/End: Original strand, 25710907 - 25711169
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaac 117  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||    
T  25710907 agttaatcatggttgcaccccaaaatgacaagatta--ccctttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaac 25711004  T
Q  118 ccctcttccaaaaccataattctccaatcgattg----tgttctgcgaagatttttaaatccatactttctcacg-ccattcatgatttcaaagaaaatt 212  Q
    || ||||||||||||||||||||||||||||| |    ||||||||||||||||| ||| ||||| ||||||||| ||||||||||||||||||||||||    
T  25711005 ccttcttccaaaaccataattctccaatcgatcgatggtgttctgcgaagattttcaaaaccatattttctcacgtccattcatgatttcaaagaaaatt 25711104  T
Q  213 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttcttatgggttctc 277  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  25711105 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttctttttatgggttctc 25711169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 18 - 277
Target Start/End: Complemental strand, 40586247 - 40585985
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaac 117  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||    
T  40586247 agttaatcatggttgcaccccaaaatgacaagatta--ccctttcataaaatttgattttcaaaaagcatattccttcttttttggttacaccccaaaac 40586150  T
Q  118 ccctcttccaaaaccataattctccaatcgat----tgtgttctgcgaagatttttaaatccatactttctcacg-ccattcatgatttcaaagaaaatt 212  Q
    |  |||||||||||||||||||||||||||||    |||||||| |||||||||| ||| ||||||||||||||| ||||||||||||| ||||||||||    
T  40586149 ctttcttccaaaaccataattctccaatcgatcgattgtgttcttcgaagattttcaaaaccatactttctcacgtccattcatgattttaaagaaaatt 40586050  T
Q  213 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttcttatgggttctc 277  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40586049 cgaagcaaatcaagttagcaagtgttgttcttcaatcgattgtgtttttcttcttatgggttctc 40585985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 18 - 277
Target Start/End: Complemental strand, 33712699 - 33712438
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaac 117  Q
    |||||||||||||||||||| |||||||||||||||  |||||||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||    
T  33712699 agttaatcatggttgcaccctaaaatgacaagatta--ccctttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaac 33712602  T
Q  118 ccctcttccaaaaccataattctccaat----cgattgtgttctgcgaagatttttaaatccatactttctcacg-ccattcatgatttcaaagaaaatt 212  Q
    || |||||||||||||||||||||||||    ||||||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||    
T  33712601 ccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaatt 33712502  T
Q  213 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttcttatgggttctc 277  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||    
T  33712501 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtg-ttttcttgttatgggttctc 33712438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 18 - 277
Target Start/End: Complemental strand, 4044884 - 4044622
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaac 117  Q
    |||||||||||||||||||||||||| |||||||||  |||||||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||    
T  4044884 agttaatcatggttgcaccccaaaataacaagatta--ccctttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaac 4044787  T
Q  118 ccctcttccaaaaccataattctccaatcgat----tgtgttctgcgaagatttttaaatccatactttctcacg-ccattcatgatttcaaagaaaatt 212  Q
    || |||||||||||||||||||| ||||||||    |||||||| |||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||    
T  4044786 ccttcttccaaaaccataattcttcaatcgatcgattgtgttctacgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaatt 4044687  T
Q  213 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttcttatgggttctc 277  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  4044686 caaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttattatgggttctc 4044622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 18 - 277
Target Start/End: Complemental strand, 10841508 - 10841247
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaac 117  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||    
T  10841508 agttaatcatggttgcaccccaaaatgacaagatta--ccctttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaac 10841411  T
Q  118 ccctcttccaaaaccataattctccaat----cgattgtgttctgcgaagatttttaaatccatactttctcacg-ccattcatgatttcaaagaaaatt 212  Q
    || |||||||||||||||||||||||||    |||||||||| |||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||    
T  10841410 ccttcttccaaaaccataattctccaatcgatcgattgtgttttgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaatt 10841311  T
Q  213 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttcttatgggttctc 277  Q
    |||||||||||||||||||||||||||||||||||||||||||| || |||| ||||||||||||    
T  10841310 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtg-ttctcttgttatgggttctc 10841247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 18 - 277
Target Start/End: Original strand, 53974331 - 53974592
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaac 117  Q
    ||||||||||||||||||||||||||||||||||||  ||| |||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||    
T  53974331 agttaatcatggttgcaccccaaaatgacaagatta--cccattcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaac 53974428  T
Q  118 ccctcttccaaaaccataattctcca----atcgattgtgttctgcgaagatttttaaatccatactttctcacg-ccattcatgatttcaaagaaaatt 212  Q
    || |||||||||||||||||||||||    ||||||||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||    
T  53974429 ccttcttccaaaaccataattctccaatccatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaatt 53974528  T
Q  213 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttcttatgggttctc 277  Q
    ||||||||||||||||| |||||||||||||||||||||||||| ||||||| ||||||||||||    
T  53974529 cgaagcaaatcaggttaacaagtgttgttcttcaatcgattgtg-ttttcttgttatgggttctc 53974592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 18 - 277
Target Start/End: Original strand, 41069857 - 41070117
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaac 117  Q
    |||||||||||||||||||  |||||||||||||||  |||||||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||    
T  41069857 agttaatcatggttgcacct-aaaatgacaagatta--ccctttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaac 41069953  T
Q  118 ccctcttccaaaaccataattctcca----atcgattgtgttctgcgaagatttttaaatccatactttctcacg-ccattcatgatttcaaagaaaatt 212  Q
    || |||||||||||||||||||||||    |||||||||||| |||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||    
T  41069954 ccttcttccaaaaccataattctccaatcgatcgattgtgttttgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaatt 41070053  T
Q  213 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttcttatgggttctc 277  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||    
T  41070054 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtg-ttttcttgttatgggttctc 41070117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 173; E-Value: 5e-93
Query Start/End: Original strand, 18 - 277
Target Start/End: Original strand, 36430288 - 36430549
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaac 117  Q
    ||||||||||||||||||||||||||||||||||||  | |||| ||||||||||||||||||||||| |||||||||||| || ||||||| |||||||    
T  36430288 agttaatcatggttgcaccccaaaatgacaagatta--ctctttgataaaatttgattttcaaaaagcctattccttctttttttgttacaccccaaaac 36430385  T
Q  118 ccctcttccaaaaccataattctccaatcgat----tgtgttctgcgaagatttttaaatccatactttctcacg-ccattcatgatttcaaagaaaatt 212  Q
    || |||||||||| ||||||||||||||||||    |||||| |||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||    
T  36430386 ccttcttccaaaatcataattctccaatcgatcgattgtgttttgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaatt 36430485  T
Q  213 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttcttatgggttctc 277  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||    
T  36430486 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtg-ttttcttgttatgggttctc 36430549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 30 - 276
Target Start/End: Complemental strand, 6268422 - 6268173
Alignment:
Q  30 ttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaacccctcttccaaa 129  Q
    ||||||||||||||||||||||||  ||||||| |||||||||||||||||||||| |||||||||||| ||  |||||| ||||||||  |||||||||    
T  6268422 ttgcaccccaaaatgacaagatta--ccctttcctaaaatttgattttcaaaaagcctattccttctttttttattacaccccaaaaccgttcttccaaa 6268325  T
Q  130 accataattctccaatcgat----tgtgttctgcgaagatttttaaatccatactttctcacg-ccattcatgatttcaaagaaaattcgaagcaaatca 224  Q
    ||||||||||||||||||||    |||||||| |||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  6268324 accataattctccaatcgatcgattgtgttctacgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaattcgaagcaaatca 6268225  T
Q  225 ggttagcaagtgttgttcttcaatcgattgtgtttttcttcttatgggttct 276  Q
    |||||||||||||||||||||||||||||||||||||||| || ||||||||    
T  6268224 ggttagcaagtgttgttcttcaatcgattgtgtttttcttgttgtgggttct 6268173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 18 - 277
Target Start/End: Original strand, 33966916 - 33967164
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaac 117  Q
    ||||||||||||||||| ||||||||||||||||||  |||||||||||||||||||||||||||||  |||||||||||| |||||||||| |||||||    
T  33966916 agttaatcatggttgcatcccaaaatgacaagatta--ccctttcataaaatttgattttcaaaaagtctattccttcttttttggttacaccccaaaac 33967013  T
Q  118 ccctcttccaaaaccataattctccaatcgat----tgtgttctgcgaagatttttaaatccatactttctcacg-ccattcatgatttcaaagaaaatt 212  Q
    |              |||||||| ||||||||    ||||||||||||||||||| ||| ||||||||||||||  ||||||||||||||||||||||||    
T  33967014 c--------------ataattcttcaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacatccattcatgatttcaaagaaaatt 33967099  T
Q  213 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttcttatgggttctc 277  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  33967100 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctc 33967164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 18 - 238
Target Start/End: Complemental strand, 7156747 - 7156541
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaac 117  Q
    ||||||||||||||||| |||||||||| |||||||  |||||||||||||||||||||||||| ||  |||||||||||| | |||||||| |||||||    
T  7156747 agttaatcatggttgcatcccaaaatgataagatta--ccctttcataaaatttgattttcaaagagtctattccttctttttaggttacaccccaaaac 7156650  T
Q  118 ccctcttccaaaaccataattctccaatcgattgtgttctgcgaagatttttaaatccatactttctcacg-ccattcatgatttcaaagaaaattcgaa 216  Q
    |||||||||||||||||| |||||||| ||||         |||    ||| ||| ||||||||||||||| || |||||||||||||||||||||||||    
T  7156649 ccctcttccaaaaccatatttctccaaacgat---------cga----tttcaaaaccatactttctcacgtcctttcatgatttcaaagaaaattcgaa 7156563  T
Q  217 gcaaatcaggttagcaagtgtt 238  Q
    ||||||||||||||||||||||    
T  7156562 gcaaatcaggttagcaagtgtt 7156541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 20 - 125
Target Start/End: Complemental strand, 36885814 - 36885711
Alignment:
Q  20 ttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaaccc 119  Q
    |||||| ||||||||||| |||||||||| ||||  |||||||||||||||| ||||||||||||||| |||||| |||||||||||||| | |||| ||    
T  36885814 ttaatcctggttgcaccctaaaatgacaaaatta--ccctttcataaaattttattttcaaaaagcatcttccttttttcttggttacaccctaaaatcc 36885717  T
Q  120 ctcttc 125  Q
    ||||||    
T  36885716 ctcttc 36885711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 20 - 109
Target Start/End: Original strand, 35039595 - 35039682
Alignment:
Q  20 ttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacac 109  Q
    |||||| |||||||||||||||||||||| ||||  ||||| |||||||||| ||||||||||||||| |||||| ||||||||||||||    
T  35039595 ttaatcctggttgcaccccaaaatgacaaaatta--cccttccataaaatttaattttcaaaaagcatcttccttttttcttggttacac 35039682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 27 - 125
Target Start/End: Complemental strand, 7681070 - 7680974
Alignment:
Q  27 tggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaacccctcttc 125  Q
    ||||||||||| |||||||||| ||||  ||||| |||||||||| ||||||||||||||| |||||| |||||||||||||| | |||||| ||||||    
T  7681070 tggttgcaccctaaaatgacaaaatta--cccttccataaaatttaattttcaaaaagcatcttccttttttcttggttacaccctaaaacctctcttc 7680974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 20 - 109
Target Start/End: Complemental strand, 49779928 - 49779841
Alignment:
Q  20 ttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacac 109  Q
    |||||| |||||||| ||||||||||||| |||||  | ||||||||||||| ||||||||||||||| |||||| ||||||||||||||    
T  49779928 ttaatcttggttgcatcccaaaatgacaaaattat--cttttcataaaatttaattttcaaaaagcatcttccttttttcttggttacac 49779841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 27 - 125
Target Start/End: Complemental strand, 38145307 - 38145211
Alignment:
Q  27 tggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaacccctcttc 125  Q
    ||||||||||| |||||||||| ||||  |||||||||||||||| ||||||||||||  | |||||| |||||||||||||| | |||| ||||||||    
T  38145307 tggttgcaccctaaaatgacaaaatta--ccctttcataaaatttaattttcaaaaagactcttccttttttcttggttacaccctaaaatccctcttc 38145211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 20 - 125
Target Start/End: Original strand, 11123881 - 11123984
Alignment:
Q  20 ttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaaccc 119  Q
    |||||| ||||||| |||||||||||||| ||||  ||||| |||||||||| |||||||||||| || || ||| |||||||||||||| | |||| ||    
T  11123881 ttaatcctggttgcgccccaaaatgacaaaatta--cccttccataaaatttaattttcaaaaagtatctttcttttttcttggttacaccctaaaatcc 11123978  T
Q  120 ctcttc 125  Q
    ||||||    
T  11123979 ctcttc 11123984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 20 - 125
Target Start/End: Complemental strand, 36232745 - 36232642
Alignment:
Q  20 ttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaaccc 119  Q
    |||||| ||||||||||| |||||||||| ||||  |||||||||||||||| ||||| ||||||  | |||||| |||||||||||||| | |||| ||    
T  36232745 ttaatcctggttgcaccctaaaatgacaaaatta--ccctttcataaaatttaattttaaaaaagactcttccttttttcttggttacaccctaaaatcc 36232648  T
Q  120 ctcttc 125  Q
    ||||||    
T  36232647 ctcttc 36232642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 20 - 109
Target Start/End: Complemental strand, 44354572 - 44354485
Alignment:
Q  20 ttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacac 109  Q
    |||||| |||||||||||||||||||||  |||||  |||| |||||||||| ||||||||||| |||||||| | ||||||||||||||    
T  44354572 ttaatcctggttgcaccccaaaatgacagaattat--ccttccataaaatttaattttcaaaaaacatattccatttttcttggttacac 44354485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 20 - 108
Target Start/End: Original strand, 48584857 - 48584943
Alignment:
Q  20 ttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttaca 108  Q
    |||||| |||||| || |||||||||||| |||||  ||||||||||||||| ||||||||||||||| || ||| |||||||||||||    
T  48584857 ttaatcctggttgtactccaaaatgacaaaattat--cctttcataaaatttaattttcaaaaagcatctttcttttttcttggttaca 48584943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 54 - 125
Target Start/End: Complemental strand, 47098345 - 47098274
Alignment:
Q  54 taccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaacccctcttc 125  Q
    ||||||| |||||||||| ||||||||||||  | ||||||||||||||||||||| ||||||||| |||||    
T  47098345 tacccttgcataaaatttcattttcaaaaagtctcttccttctttcttggttacaccccaaaacccttcttc 47098274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 71
Target Start/End: Original strand, 84409 - 84460
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaattt 71  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  84409 agttaatcatggttgcaccccaaaatgacaagat--taccctttcataaaattt 84460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 125
Target Start/End: Original strand, 14279129 - 14279232
Alignment:
Q  20 ttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaaccc 119  Q
    |||||| ||||||||||| |||||||||| ||||  |  || |||||||||| ||||||||||||||| ||| || |||||||||||||| | |||| ||    
T  14279129 ttaatcctggttgcaccctaaaatgacaaaatta--cttttccataaaatttaattttcaaaaagcatgttcattttttcttggttacaccctaaaatcc 14279226  T
Q  120 ctcttc 125  Q
    ||||||    
T  14279227 ctcttc 14279232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 71
Target Start/End: Original strand, 24395116 - 24395167
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaattt 71  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  24395116 agttaatcatggttgcaccccaaaatgacaagat--taccctttcataaaattt 24395167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 109
Target Start/End: Original strand, 30418713 - 30418800
Alignment:
Q  20 ttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacac 109  Q
    |||||||||| ||||| |||||||||||  |||||  ||||  ||||||||| ||||||||||||||| |||||| ||||||||||||||    
T  30418713 ttaatcatggctgcactccaaaatgacagaattat--ccttctataaaatttaattttcaaaaagcatcttccttttttcttggttacac 30418800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 71
Target Start/End: Original strand, 32236153 - 32236204
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaattt 71  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  32236153 agttaatcatggttgcaccccaaaatgacaagat--taccctttcataaaattt 32236204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 109
Target Start/End: Complemental strand, 36841179 - 36841092
Alignment:
Q  20 ttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacac 109  Q
    |||||| |||||| ||| |||||||| || ||||  ||||| |||||||||| ||||||||||||||| |||||| ||||||||||||||    
T  36841179 ttaatcctggttgtacctcaaaatgataaaatta--cccttccataaaatttaattttcaaaaagcatcttccttttttcttggttacac 36841092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 197 - 275
Target Start/End: Complemental strand, 47098217 - 47098139
Alignment:
Q  197 gatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttcttatgggttc 275  Q
    |||| ||||||||||| ||||||||| ||||||||||||  |||||||||||| ||| |||||||||| | ||||||||    
T  47098217 gattgcaaagaaaatttgaagcaaataaggttagcaagttgtgttcttcaatcaattatgtttttcttgtcatgggttc 47098139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 109
Target Start/End: Complemental strand, 51662236 - 51662149
Alignment:
Q  20 ttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacac 109  Q
    |||||| |||||||| || ||||||| || |||||  |||| |||||||||| ||||||||||||||| |||||| ||||||||||||||    
T  51662236 ttaatcctggttgcatcctaaaatgataaaattat--ccttccataaaatttaattttcaaaaagcatcttccttttttcttggttacac 51662149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 54 - 119
Target Start/End: Original strand, 54556402 - 54556467
Alignment:
Q  54 taccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaaccc 119  Q
    |||||||||||||||||||||||| ||||||  | |||||||| |||||||||||| |||||||||    
T  54556402 taccctttcataaaatttgatttttaaaaagtttcttccttctctcttggttacaccccaaaaccc 54556467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 38 - 125
Target Start/End: Original strand, 52812168 - 52812253
Alignment:
Q  38 caaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaacccctcttc 125  Q
    ||||||||||| ||||| |  || |||||||||| ||||||||||||||| |||||| |||||||||||||| | |||| ||||||||    
T  52812168 caaaatgacaaaattattc--ttccataaaatttaattttcaaaaagcatcttccttttttcttggttacacactaaaatccctcttc 52812253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 39 - 125
Target Start/End: Complemental strand, 39627176 - 39627093
Alignment:
Q  39 aaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaacccctcttc 125  Q
    |||||||||| |||||  ||||| ||||||||| ||||| |||||| || |||||||||| |||||||||| |||||||||||||||    
T  39627176 aaaatgacaaaattat--ccttttataaaattt-atttttaaaaagtattttccttcttttttggttacaccccaaaacccctcttc 39627093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 197 - 275
Target Start/End: Original strand, 1774218 - 1774296
Alignment:
Q  197 gatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttcttatgggttc 275  Q
    |||||||||||||||| ||||||||| ||||||| |||   |||||||||||||||| |||||| ||| | ||||||||    
T  1774218 gatttcaaagaaaatttgaagcaaataaggttaggaagctatgttcttcaatcgattatgttttacttgtcatgggttc 1774296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 20 - 109
Target Start/End: Complemental strand, 2613400 - 2613313
Alignment:
Q  20 ttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacac 109  Q
    |||||| ||||||||   |||||||| || |||||  ||||||||||||||| ||||||||||| ||| |||||| ||||||||||||||    
T  2613400 ttaatcttggttgcatttcaaaatgataaaattat--cctttcataaaatttaattttcaaaaaacatcttccttttttcttggttacac 2613313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 20 - 109
Target Start/End: Complemental strand, 4596499 - 4596413
Alignment:
Q  20 ttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacac 109  Q
    |||||| | |||||| ||||||||||||| ||||  ||||| |||||||||  ||||||||||||||| |||||| ||||||||||||||    
T  4596499 ttaatcctagttgcatcccaaaatgacaaaatta--cccttccataaaatta-attttcaaaaagcatcttccttttttcttggttacac 4596413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 71
Target Start/End: Complemental strand, 7679773 - 7679722
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaattt 71  Q
    |||||||||||||||||| |||||||||||||||  ||||||||||||||||||    
T  7679773 agttaatcatggttgcactccaaaatgacaagat--taccctttcataaaattt 7679722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 20 - 125
Target Start/End: Original strand, 11095670 - 11095773
Alignment:
Q  20 ttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaaccc 119  Q
    |||||| |||||||| |  |||||||||| |  ||||||||  |||| |||| ||||||||||||||| |||||| |||||||||||||| | |||| ||    
T  11095670 ttaatcctggttgcatcataaaatgacaaaa--atacccttctataatatttaattttcaaaaagcatcttccttttttcttggttacaccctaaaatcc 11095767  T
Q  120 ctcttc 125  Q
    ||||||    
T  11095768 ctcttc 11095773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 71
Target Start/End: Complemental strand, 20657463 - 20657412
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaattt 71  Q
    |||||||||||||||||| |||||||||||||||  ||||||||||||||||||    
T  20657463 agttaatcatggttgcactccaaaatgacaagat--taccctttcataaaattt 20657412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 71
Target Start/End: Original strand, 26090222 - 26090273
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaattt 71  Q
    ||||||||||||||||||| ||||||||||||||  ||||||||||||||||||    
T  26090222 agttaatcatggttgcacctcaaaatgacaagat--taccctttcataaaattt 26090273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 62 - 126
Target Start/End: Original strand, 1774098 - 1774162
Alignment:
Q  62 cataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaacccctcttcc 126  Q
    |||||||||| ||||| ||||||  | ||||||||||||||||||||  ||||||||||||||||    
T  1774098 cataaaatttaatttttaaaaagtttcttccttctttcttggttacatcccaaaacccctcttcc 1774162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 27 - 124
Target Start/End: Complemental strand, 8947927 - 8947833
Alignment:
Q  27 tggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaacccctctt 124  Q
    ||||| ||| || ||||||||| |||||   |||||||| | ||||||||||||||||| | ||||||||| ||| ||||||| | ||||||||||||    
T  8947927 tggttacactccgaaatgacaaaattat---ctttcatatagtttgattttcaaaaagcctcttccttcttcctttgttacaccctaaaacccctctt 8947833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 62 - 109
Target Start/End: Original strand, 52343145 - 52343192
Alignment:
Q  62 cataaaatttgattttcaaaaagcatattccttctttcttggttacac 109  Q
    |||||||||| ||||||||||||||| |||||| ||||||||||||||    
T  52343145 cataaaatttaattttcaaaaagcatcttccttttttcttggttacac 52343192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 71
Target Start/End: Original strand, 672088 - 672139
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaattt 71  Q
    |||||||||||||||||| ||||||||| |||||  ||||||||||||||||||    
T  672088 agttaatcatggttgcactccaaaatgataagat--taccctttcataaaattt 672139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 124
Target Start/End: Original strand, 33392534 - 33392635
Alignment:
Q  20 ttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaaccc 119  Q
    |||||| |||||  ||||||||||||||| ||||  || ||||||||||||| ||||||||||||  | |||||| ||||| |||||||  ||||||| |    
T  33392534 ttaatcctggttataccccaaaatgacaaaatta--ccttttcataaaatttaattttcaaaaagtcttttcctt-tttctcggttacatcccaaaacac 33392630  T
Q  120 ctctt 124  Q
    |||||    
T  33392631 ctctt 33392635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 62 - 109
Target Start/End: Original strand, 19941745 - 19941792
Alignment:
Q  62 cataaaatttgattttcaaaaagcatattccttctttcttggttacac 109  Q
    |||||||||| ||||||||||||||| |||||| |||||| |||||||    
T  19941745 cataaaatttaattttcaaaaagcatcttccttttttctttgttacac 19941792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 205; Significance: 1e-112; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 18 - 277
Target Start/End: Complemental strand, 29630559 - 29630298
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaac 117  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  29630559 agttaatcatggttgcaccccaaaatgacaagatta--ccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacaccccaaaac 29630462  T
Q  118 ccctcttccaaaaccataattctccaat----cgattgtgttctgcgaagatttttaaatccatactttctcacg-ccattcatgatttcaaagaaaatt 212  Q
    ||||||||||||||||||||||||||||    ||||||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||    
T  29630461 ccctcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaatt 29630362  T
Q  213 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttcttatgggttctc 277  Q
    | |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  29630361 caaagcaaatcaggttagcaagtgttgttcttcaatcgattgtg-ttttcttcttatgggttctc 29630298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 18 - 277
Target Start/End: Original strand, 3094609 - 3094871
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaac 117  Q
    ||||||||||||||||||||||||||||||| ||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  3094609 agttaatcatggttgcaccccaaaatgacaatatta--ccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacaccccaaaac 3094706  T
Q  118 ccctcttccaaaaccataattctcca----atcgattgtgttctgcgaagatttttaaatccatactttctcacg-ccattcatgatttcaaagaaaatt 212  Q
    | ||||||||||||||||||||||||    ||||||| ||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||| ||||||    
T  3094707 ctctcttccaaaaccataattctccaatcgatcgattatgttctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaataaaatt 3094806  T
Q  213 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttcttatgggttctc 277  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3094807 cgaagcaaatcatgttagcaagtgttgttcttcaatcgattgtgtttttcttcttatgggttctc 3094871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 18 - 277
Target Start/End: Original strand, 18893696 - 18893958
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaac 117  Q
    |||||||||||||| ||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||    
T  18893696 agttaatcatggttacaccccaaaatgacaagattat--cctttcataaaatttgattttcaaaaagcatattccttcttttttggttacaccccaaaac 18893793  T
Q  118 ccctcttccaaaaccataattctccaatcgattg----tgttctgcgaagatttttaaatccatactttctcacg-ccattcatgatttcaaagaaaatt 212  Q
    || ||||||| |||||||||||||||| ||||||    ||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||    
T  18893794 ccttcttccagaaccataattctccaaccgattgattgtgttctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaatt 18893893  T
Q  213 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttcttatgggttctc 277  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  18893894 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctc 18893958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 18 - 277
Target Start/End: Original strand, 6625379 - 6625641
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaac 117  Q
    |||||||||||||||||||| ||||||||||||||||  ||||||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||    
T  6625379 agttaatcatggttgcaccctaaaatgacaagattat--cctttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaac 6625476  T
Q  118 ccctcttccaaaaccataattctccaa----tcgattgtgttctgcgaagatttttaaatccatactttctcacgc-cattcatgatttcaaagaaaatt 212  Q
    || ||||||||||||||||||||||||    |||||||||||||||||||||||| ||| |||||||||||||||  |||||||||||||||||||||||    
T  6625477 ccttcttccaaaaccataattctccaaccgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgttcattcatgatttcaaagaaaatt 6625576  T
Q  213 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttcttatgggttctc 277  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||    
T  6625577 cgaagcaaatcaggttagcaagtgttgttcttcaatagattgtgtttttcttgttatgggttctc 6625641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 18 - 277
Target Start/End: Complemental strand, 29122417 - 29122155
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaac 117  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| |||||||||||| ||||||||||  ||||||    
T  29122417 agttaatcatggttgcaccccaaaatgacaagatta--ccctttcataaaatttgattttcaaaaagcctattccttcttttttggttacacctcaaaac 29122320  T
Q  118 ccctcttccaaaaccataattctccaatcgat----tgtgttctgcgaagatttttaaatccatactttctcacg-ccattcatgatttcaaagaaaatt 212  Q
    || |||||||||||||||||||| ||||||||    |||||| |||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||    
T  29122319 ccttcttccaaaaccataattcttcaatcgatcgattgtgttatgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaatt 29122220  T
Q  213 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttcttatgggttctc 277  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  29122219 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttattatgggttctc 29122155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 18 - 277
Target Start/End: Original strand, 7141284 - 7141546
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaac 117  Q
    |||||||||| ||||||||||||||| ||||||||||  ||||||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||    
T  7141284 agttaatcatagttgcaccccaaaataacaagattat--cctttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaac 7141381  T
Q  118 ccctcttccaaaaccataattctccaatcgat----tgtgttctgcgaagatttttaaatccatactttctcacg-ccattcatgatttcaaagaaaatt 212  Q
    || | |||||||||||||||||||||||||||    ||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||    
T  7141382 ccttattccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaatt 7141481  T
Q  213 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttcttatgggttctc 277  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||    
T  7141482 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgttttttttgttatgggttctc 7141546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 18 - 264
Target Start/End: Complemental strand, 6167999 - 6167750
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaac 117  Q
    |||||||||||||||||||| |||||||||||||||   ||||||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||    
T  6167999 agttaatcatggttgcaccctaaaatgacaagattaa--cctttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaac 6167902  T
Q  118 ccctcttccaaaaccataattctccaatcgat----tgtgttctgcgaagatttttaaatccatactttctcacg-ccattcatgatttcaaagaaaatt 212  Q
    || ||||||||| |||||||||||||||||||    ||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||    
T  6167901 ccttcttccaaatccataattctccaatcgatcgattgtgttctgcgaagattttcaaacccatactttctcacgtccattcatgatttcaaagaaaatt 6167802  T
Q  213 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttctt 264  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6167801 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttctt 6167750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 18 - 213
Target Start/End: Complemental strand, 25335201 - 25335003
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaac 117  Q
    ||||||||||||||||||| |||||||||||||||||  ||||||||||||||||||||||||||||| |||||||||||| || ||||||| |||||||    
T  25335201 agttaatcatggttgcacctcaaaatgacaagattat--cctttcataaaatttgattttcaaaaagcttattccttctttttttgttacaccccaaaac 25335104  T
Q  118 ccctcttccaaaaccataattctccaat----cgattgtgttctgcgaagatttttaaatccatactttctcacg-ccattcatgatttcaaagaaaatt 212  Q
    || |||||||||||||||||||||||||    ||||||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||    
T  25335103 ccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaatt 25335004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 20 - 188
Target Start/End: Complemental strand, 13890019 - 13889849
Alignment:
Q  20 ttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaaccc 119  Q
    |||||||||||||||||||||||| |||||||||  |||||||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||||    
T  13890019 ttaatcatggttgcaccccaaaataacaagatta--ccctttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaaccc 13889922  T
Q  120 ctcttccaaaaccataattctccaat----cgattgtgttctgcgaagatttttaaatccatactttctcacg 188  Q
     |||||||||||||||||||||||||    |||||||||||| |||||||||| ||| |||||||||||||||    
T  13889921 ttcttccaaaaccataattctccaatcgatcgattgtgttctacgaagattttcaaaaccatactttctcacg 13889849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 27 - 125
Target Start/End: Complemental strand, 8811357 - 8811261
Alignment:
Q  27 tggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaacccctcttc 125  Q
    ||||| ||||||||||||| || |||||  |||| |||||||||||||||| ||||||||| |||||| |||||||||||||||||||||||| |||||    
T  8811357 tggttacaccccaaaatgataaaattat--ccttacataaaatttgattttgaaaaagcatcttccttttttcttggttacactccaaaacccttcttc 8811261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 27 - 125
Target Start/End: Original strand, 7081002 - 7081098
Alignment:
Q  27 tggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaacccctcttc 125  Q
    ||||| ||||||||||||| || |||||  ||||  ||||||||||||||||||||||| | |||||||||| ||||||||||||||||| ||||||||    
T  7081002 tggttacaccccaaaatgataaaattat--ccttagataaaatttgattttcaaaaagcctcttccttcttttttggttacactccaaaatccctcttc 7081098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 20 - 125
Target Start/End: Original strand, 6925800 - 6925903
Alignment:
Q  20 ttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaaccc 119  Q
    |||||| || ||||||||||||||||||| ||||  ||||| |||||||||| ||||||||||||||| |||||| |||||||||||||  | |||| ||    
T  6925800 ttaatcctgattgcaccccaaaatgacaaaatta--cccttccataaaatttaattttcaaaaagcatcttccttttttcttggttacatcctaaaatcc 6925897  T
Q  120 ctcttc 125  Q
    ||||||    
T  6925898 ctcttc 6925903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 21 - 106
Target Start/End: Complemental strand, 34085904 - 34085821
Alignment:
Q  21 taatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggtta 106  Q
    ||||| |||||||||||||||||||||| |||||  |||| |||||||||| ||||||||||||||| |||||| |||||||||||    
T  34085904 taatcctggttgcaccccaaaatgacaaaattat--ccttccataaaatttaattttcaaaaagcatcttccttttttcttggtta 34085821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 109
Target Start/End: Original strand, 23350377 - 23350464
Alignment:
Q  20 ttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacac 109  Q
    |||||| |||||||||||||||||||  | |||||  |||| |||||||||| ||||||||||||||| |||||| ||||||| ||||||    
T  23350377 ttaatcctggttgcaccccaaaatgatcaaattat--ccttccataaaatttaattttcaaaaagcatcttccttttttcttgtttacac 23350464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 198 - 275
Target Start/End: Original strand, 7081155 - 7081232
Alignment:
Q  198 atttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttcttatgggttc 275  Q
    |||||||||||| |||||||||||| |||||| |||||  | |||||||||| ||| |||||||||| ||||||||||    
T  7081155 atttcaaagaaatttcgaagcaaataaggttaacaagttgtattcttcaatcaattatgtttttcttgttatgggttc 7081232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 198 - 275
Target Start/End: Complemental strand, 8811204 - 8811127
Alignment:
Q  198 atttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttcttatgggttc 275  Q
    |||||||||||| ||| |||||||| ||||||||||||  | |||||||||| ||| |||||||||| ||||||||||    
T  8811204 atttcaaagaaatttcaaagcaaataaggttagcaagttgtattcttcaatcaattatgtttttcttgttatgggttc 8811127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 56 - 125
Target Start/End: Original strand, 18024436 - 18024505
Alignment:
Q  56 ccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaacccctcttc 125  Q
    |||||||||||||| | ||||| ||||||| | ||||||||||||||||||||| | |||||||||||||    
T  18024436 ccctttcataaaatctaattttgaaaaagcttcttccttctttcttggttacacccgaaaacccctcttc 18024505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 20 - 109
Target Start/End: Complemental strand, 11369141 - 11369054
Alignment:
Q  20 ttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacac 109  Q
    |||||| |||||||||| ||||||||||| ||||  | |||  ||||||||| |||||||||||| || |||||| ||||||||||||||    
T  11369141 ttaatcttggttgcacctcaaaatgacaaaatta--ctcttctataaaatttaattttcaaaaagaatcttccttttttcttggttacac 11369054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 54 - 125
Target Start/End: Original strand, 5714932 - 5715003
Alignment:
Q  54 taccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaacccctcttc 125  Q
    |||||||||||||||||| ||||||||||||||| ||| || | | |||||||||| | |||| ||||||||    
T  5714932 taccctttcataaaatttaattttcaaaaagcatcttcattttcttttggttacaccctaaaatccctcttc 5715003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 277
Target Start/End: Complemental strand, 13889849 - 13889811
Alignment:
Q  239 gttcttcaatcgattgtgtttttcttcttatgggttctc 277  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  13889849 gttcttcaatcgattgtgtttttcttgttatgggttctc 13889811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 78
Target Start/End: Complemental strand, 31091206 - 31091150
Alignment:
Q  20 ttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttc 78  Q
    |||||| |||||||||||||||||||||| ||  ||||||| |||||||||| ||||||    
T  31091206 ttaatcctggttgcaccccaaaatgacaaaat--tacccttccataaaatttaattttc 31091150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 27 - 124
Target Start/End: Complemental strand, 32173765 - 32173670
Alignment:
Q  27 tggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaa-gcatattccttctttcttggttacactccaaaacccctctt 124  Q
    ||||| || ||||||||||||| ||||  || ||| ||||||||| ||||||||||| || | |||||| ||||| |||||||| ||||||||||||||    
T  32173765 tggttacatcccaaaatgacaaaatta--ccattttataaaatttaattttcaaaaaagcctcttcctt-tttctcggttacaccccaaaacccctctt 32173670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 87
Target Start/End: Original strand, 8525555 - 8525613
Alignment:
Q  27 tggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcat 87  Q
    |||||||| |||||||||| || ||||  ||||| |||||||||| |||||||||||||||    
T  8525555 tggttgcatcccaaaatgataaaatta--cccttccataaaatttaattttcaaaaagcat 8525613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 87
Target Start/End: Complemental strand, 29623233 - 29623168
Alignment:
Q  20 ttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcat 87  Q
    |||||| ||||||||||  |||||||||| |||||  | || |||||||||| |||||||||||||||    
T  29623233 ttaatcctggttgcaccttaaaatgacaaaattat--ctttccataaaatttaattttcaaaaagcat 29623168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 202; Significance: 1e-110; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 18 - 277
Target Start/End: Complemental strand, 43518356 - 43518093
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaac 117  Q
    ||||||||||||||||||||||||||||||||| ||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43518356 agttaatcatggttgcaccccaaaatgacaagagta--ccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaac 43518259  T
Q  118 ccctcttccaaaaccataattctcca----atcgattgtgttctgcgaagatttttaaatccatactttctcacg-ccattcatgatttcaaagaaaatt 212  Q
    ||||||||||||||||||||||| ||    ||||||||||||||||||||||||| ||| ||||||||||||||| ||||| ||||||||||||||||||    
T  43518258 ccctcttccaaaaccataattctacaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccattaatgatttcaaagaaaatt 43518159  T
Q  213 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtg-tttttcttcttatgggttctc 277  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  43518158 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgttttttcttcttatgggttctc 43518093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 18 - 277
Target Start/End: Original strand, 9065719 - 9065981
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaac 117  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||    
T  9065719 agttaatcatggttgcaccccaaaatgacaagatta--ccctttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaac 9065816  T
Q  118 ccctcttccaaaaccataattctccaat----cgattgtgttctgcgaagatttttaaatccatactttctcacg-ccattcatgatttcaaagaaaatt 212  Q
    || |||||||||||||||||||||||||    ||||||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||    
T  9065817 ccttcttccaaaaccataattctccaattgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaatt 9065916  T
Q  213 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttcttatgggttctc 277  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  9065917 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctc 9065981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 18 - 277
Target Start/End: Complemental strand, 43293722 - 43293460
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaac 117  Q
    |||||||||||||||||||||||||||||||||||||  ||||| ||||||||||||||||||||||| |||||||||||| |||||||||| |||||||    
T  43293722 agttaatcatggttgcaccccaaaatgacaagattat--ccttttataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaac 43293625  T
Q  118 ccctcttccaaaaccataattctccaa----tcgattgtgttctgcgaagatttttaaatccatactttctcacg-ccattcatgatttcaaagaaaatt 212  Q
    || ||||||||||||||||||||||||    |||||||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||    
T  43293624 ccttcttccaaaaccataattctccaacagatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaatt 43293525  T
Q  213 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttcttatgggttctc 277  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||    
T  43293524 cgaagcaaatcaggttagcaagtgttgttcttcaatcaattgtgtttttcttgttatgggttctc 43293460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 18 - 277
Target Start/End: Complemental strand, 4156233 - 4155971
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaac 117  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||    
T  4156233 agttaatcatggttgcaccccaaaatgacaagatta--ccctttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaac 4156136  T
Q  118 ccctcttccaaaaccataattctccaatcgat----tgtgttctgcgaagatttttaaatccatactttctcacg-ccattcatgatttcaaagaaaatt 212  Q
    || |||||||||| ||||||||||||||||||    ||||||||||||||||||| |||  |||||||||||||| ||||||||||||||||||||||||    
T  4156135 ccttcttccaaaatcataattctccaatcgatcgattgtgttctgcgaagattttcaaaatcatactttctcacgtccattcatgatttcaaagaaaatt 4156036  T
Q  213 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttcttatgggttctc 277  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||    
T  4156035 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttacgggttctc 4155971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 18 - 277
Target Start/End: Original strand, 33280830 - 33281092
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaac 117  Q
    ||||||||||||||| ||||||||||||||||||||  |||||||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||    
T  33280830 agttaatcatggttgtaccccaaaatgacaagatta--ccctttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaac 33280927  T
Q  118 ccctcttccaaaaccataattctccaa----tcgattgtgttctgcgaagatttttaaatccatactttctcacg-ccattcatgatttcaaagaaaatt 212  Q
    || |||||||||||||||||| |||||    |||||||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||    
T  33280928 ccttcttccaaaaccataattttccaaccgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaatt 33281027  T
Q  213 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttcttatgggttctc 277  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||    
T  33281028 cgaagcaaatcaggttagcaagtgttgttcttcaatcaattgtgtttttcttgttatgggttctc 33281092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 181; E-Value: 8e-98
Query Start/End: Original strand, 18 - 277
Target Start/End: Complemental strand, 19034785 - 19034523
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaac 117  Q
    |||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||||||| |||||||||||| |||||||||  |||||||    
T  19034785 agttaatcatggttgcaccccaaaataacaagattat--cctttcataaaatttgattttcaaaaagcttattccttcttttttggttacatcccaaaac 19034688  T
Q  118 ccctcttccaaaaccataattctccaatcgat----tgtgttctgcgaagatttttaaatccatactttctcacgcc-attcatgatttcaaagaaaatt 212  Q
    || |||||||||||||||||||||||||||||    ||||||||||||||||||| ||| ||||||||||||||| | ||| ||||||||||||||||||    
T  19034687 ccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtctatttatgatttcaaagaaaatt 19034588  T
Q  213 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttcttatgggttctc 277  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||    
T  19034587 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatggattctc 19034523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 181; E-Value: 8e-98
Query Start/End: Original strand, 18 - 277
Target Start/End: Original strand, 24559089 - 24559351
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaac 117  Q
    ||||| ||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||  |||||||||||| |||||||||| |||||||    
T  24559089 agttagtcatggttgcaccccaaaatgacaagatta--ccctttcataaaatttgattttcaaaaagtctattccttcttttttggttacaccccaaaac 24559186  T
Q  118 ccctcttccaaaaccataattctccaatcgat----tgtgttctgcgaagatttttaaatccatactttctcacg-ccattcatgatttcaaagaaaatt 212  Q
    |  |||| |||||||||||||||| |||||||    ||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||    
T  24559187 ctttcttacaaaaccataattctctaatcgatcgactgtgttctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaatt 24559286  T
Q  213 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttcttatgggttctc 277  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  24559287 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctc 24559351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 181; E-Value: 8e-98
Query Start/End: Original strand, 18 - 277
Target Start/End: Original strand, 24600121 - 24600383
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaac 117  Q
    ||||| ||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||  |||||||||||| |||||||||| |||||||    
T  24600121 agttagtcatggttgcaccccaaaatgacaagatta--ccctttcataaaatttgattttcaaaaagtctattccttcttttttggttacaccccaaaac 24600218  T
Q  118 ccctcttccaaaaccataattctccaatcgat----tgtgttctgcgaagatttttaaatccatactttctcacg-ccattcatgatttcaaagaaaatt 212  Q
    |  |||| |||||||||||||||| |||||||    ||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||    
T  24600219 ctttcttacaaaaccataattctctaatcgatcgactgtgttctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaatt 24600318  T
Q  213 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttcttatgggttctc 277  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  24600319 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctc 24600383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 18 - 264
Target Start/End: Complemental strand, 31527642 - 31527393
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaac 117  Q
    |||||||||||||||||| |||||||||||||||||  |||||||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||    
T  31527642 agttaatcatggttgcactccaaaatgacaagatta--ccctttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaac 31527545  T
Q  118 ccctcttccaaaaccataattctcca----atcgattgtgttctgcgaagatttttaaatccatactttctcacg-ccattcatgatttcaaagaaaatt 212  Q
    || |||||||||||||||||||| ||    ||||||||||||||||||||||||| ||| |||||||||||||||  |||||||||||||||||||||||    
T  31527544 ccttcttccaaaaccataattcttcaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgttcattcatgatttcaaagaaaatt 31527445  T
Q  213 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttctt 264  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31527444 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttctt 31527393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 20 - 277
Target Start/End: Original strand, 37865898 - 37866158
Alignment:
Q  20 ttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaaccc 119  Q
    ||||||||| ||||||||||||||||||| |||||  ||||||||||||||||||||||||||||| |||| ||||||| |||||||||| ||||||||     
T  37865898 ttaatcatgattgcaccccaaaatgacaaaattat--cctttcataaaatttgattttcaaaaagcctatttcttcttttttggttacaccccaaaacca 37865995  T
Q  120 ctcttccaaaaccataattctccaatc----gattgtgttctgcgaagatttttaaatccatactttctcacgcc-attcatgatttcaaagaaaattcg 214  Q
     ||||||||||||||||||||||||||    |||||||||||||||||||||| ||| ||||||||||||||| | ||||||||||||||||||||||||    
T  37865996 ttcttccaaaaccataattctccaatcaatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtctattcatgatttcaaagaaaattcg 37866095  T
Q  215 aagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttcttatgggttctc 277  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  37866096 aagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttattatgggttctc 37866158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 18 - 277
Target Start/End: Complemental strand, 13145945 - 13145684
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaac 117  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||| | | |||||||||| ||| |||||| |||||||    
T  13145945 agttaatcatggttgcaccccaaaatgacaagatta--ccctttcataaaatttgattttcaaaaaaccttttccttcttttttgattacaccccaaaac 13145848  T
Q  118 ccctcttccaaaaccataattctccaatcgat----tgtgttctgcgaagatttttaaatccatactttctcacg-ccattcatgatttcaaagaaaatt 212  Q
    || ||||||||||||||||||||| |||||||    |||||||||| |||||||| ||| ||||||||||||||| ||||||||||||||||||||||||    
T  13145847 ccttcttccaaaaccataattctcaaatcgatcgattgtgttctgcaaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaatt 13145748  T
Q  213 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttcttatgggttctc 277  Q
    |||||||||||| ||||||||||||||||||||||||||||||| ||||||| ||||||||||||    
T  13145747 cgaagcaaatcatgttagcaagtgttgttcttcaatcgattgtg-ttttcttgttatgggttctc 13145684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 20 - 125
Target Start/End: Complemental strand, 10666199 - 10666096
Alignment:
Q  20 ttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaaccc 119  Q
    |||||| |||||||||||||||||||||| ||||  ||||| |||||||||| |||||||||||| || |||||| |||||||||||||| | |||| ||    
T  10666199 ttaatcctggttgcaccccaaaatgacaaaatta--cccttccataaaatttaattttcaaaaagtatcttccttttttcttggttacaccctaaaatcc 10666102  T
Q  120 ctcttc 125  Q
    ||||||    
T  10666101 ctcttc 10666096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 27 - 109
Target Start/End: Original strand, 31484679 - 31484759
Alignment:
Q  27 tggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacac 109  Q
    |||||||||||||||||||||| ||||  ||||| |||||||||| ||||||||||||||| |||||| ||||||||||||||    
T  31484679 tggttgcaccccaaaatgacaaaatta--cccttccataaaatttaattttcaaaaagcatcttccttttttcttggttacac 31484759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 27 - 109
Target Start/End: Complemental strand, 41881975 - 41881895
Alignment:
Q  27 tggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacac 109  Q
    |||||||||||||||||||||| ||||  || || |||||||||| |||||||||||||||||||||| ||||||||||||||    
T  41881975 tggttgcaccccaaaatgacaaaatta--cctttccataaaatttaattttcaaaaagcatattccttttttcttggttacac 41881895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 20 - 125
Target Start/End: Original strand, 7338643 - 7338745
Alignment:
Q  20 ttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaaccc 119  Q
    |||||| |||||||||||||||||||||| ||||  || ||||||||||||| ||||||||||||||| |||||| ||||||| |||||| | |||| ||    
T  7338643 ttaatcctggttgcaccccaaaatgacaaaatta--ccttttcataaaatttaattttcaaaaagcatcttcctt-tttcttgattacaccctaaaatcc 7338739  T
Q  120 ctcttc 125  Q
    ||||||    
T  7338740 ctcttc 7338745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 20 - 109
Target Start/End: Original strand, 8232566 - 8232653
Alignment:
Q  20 ttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacac 109  Q
    |||||| ||||||||||||||||||| |||||||  |||||||||||||||| ||||||||||| ||| |||||| |||||| |||||||    
T  8232566 ttaatcctggttgcaccccaaaatgataagatta--ccctttcataaaatttaattttcaaaaaacatcttccttttttcttagttacac 8232653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 20 - 121
Target Start/End: Original strand, 36294204 - 36294303
Alignment:
Q  20 ttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaaccc 119  Q
    |||||||||||| |||||||||||||||| ||||  ||||| |||||||||| |||||||||| || | ||||||||| ||||| ||||| |||||||||    
T  36294204 ttaatcatggttacaccccaaaatgacaaaatta--cccttccataaaatttaattttcaaaaggcctcttccttcttccttggctacaccccaaaaccc 36294301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 20 - 125
Target Start/End: Complemental strand, 37274677 - 37274574
Alignment:
Q  20 ttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaaccc 119  Q
    |||||| || ||||||||||||||||||| ||||  ||||| |||||||||| ||||||||||||||| ||| || |||||||||||||| | |||| ||    
T  37274677 ttaatcctgcttgcaccccaaaatgacaaaatta--cccttccataaaatttaattttcaaaaagcatcttcattttttcttggttacaccctaaaatcc 37274580  T
Q  120 ctcttc 125  Q
    ||||||    
T  37274579 ctcttc 37274574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 20 - 125
Target Start/End: Original strand, 40738915 - 40739018
Alignment:
Q  20 ttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaaccc 119  Q
    |||||| ||||||||||| |||||||||| ||||  |||||||||||||||| ||||||||||||  | |||||| |||||||||||||| | |||| ||    
T  40738915 ttaatcctggttgcaccctaaaatgacaaaatta--ccctttcataaaatttaattttcaaaaagactcttccttttttcttggttacaccctaaaatcc 40739012  T
Q  120 ctcttc 125  Q
    ||||||    
T  40739013 ctcttc 40739018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 197 - 275
Target Start/End: Complemental strand, 12189224 - 12189146
Alignment:
Q  197 gatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttcttatgggttc 275  Q
    ||||||||||||| |||||||||||| ||||||||||||| |||||||| ||| ||| |||||||||| | ||||||||    
T  12189224 gatttcaaagaaagttcgaagcaaatgaggttagcaagtggtgttcttcgatcaattatgtttttcttgtcatgggttc 12189146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 20 - 125
Target Start/End: Original strand, 18522184 - 18522287
Alignment:
Q  20 ttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaaccc 119  Q
    |||||| ||||||||||| ||||| |||| |||||  |||| |||||||||| ||||||||||| ||| |||||| ||||||||||| |||| |||| ||    
T  18522184 ttaatcctggttgcaccctaaaataacaaaattat--ccttccataaaatttaattttcaaaaaacatcttccttttttcttggttatactcaaaaatcc 18522281  T
Q  120 ctcttc 125  Q
    ||||||    
T  18522282 ctcttc 18522287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 20 - 125
Target Start/End: Original strand, 18864453 - 18864556
Alignment:
Q  20 ttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaaccc 119  Q
    |||||| ||||||||||| |||||||||| ||||  |||||||||||||||| ||||| ||||||  | |||||| |||||||||||||| | |||| ||    
T  18864453 ttaatcctggttgcaccctaaaatgacaaaatta--ccctttcataaaatttaattttaaaaaagactcttccttttttcttggttacaccctaaaatcc 18864550  T
Q  120 ctcttc 125  Q
    ||||||    
T  18864551 ctcttc 18864556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 20 - 109
Target Start/End: Complemental strand, 42437437 - 42437350
Alignment:
Q  20 ttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacac 109  Q
    |||||| |||||||||||||||||||||  |||||  |||| |||||||||| ||||||||||||||| ||| || ||||||||||||||    
T  42437437 ttaatcctggttgcaccccaaaatgacagaattat--ccttccataaaatttaattttcaaaaagcatcttcattttttcttggttacac 42437350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 20 - 123
Target Start/End: Complemental strand, 12189368 - 12189267
Alignment:
Q  20 ttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaaccc 119  Q
    |||||| ||||| ||||||||||||| || ||||  ||||| |||||||||| ||||||||||| | | | ||||||||||||||||||| ||||||| |    
T  12189368 ttaatcctggttacaccccaaaatgataaaatta--cccttccataaaatttaattttcaaaaaacctctcccttctttcttggttacaccccaaaactc 12189271  T
Q  120 ctct 123  Q
    ||||    
T  12189270 ctct 12189267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 71
Target Start/End: Complemental strand, 6469998 - 6469947
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaattt 71  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  6469998 agttaatcatggttgcaccccaaaatgacaagat--taccctttcataaaattt 6469947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 125
Target Start/End: Complemental strand, 13211051 - 13210948
Alignment:
Q  20 ttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaaccc 119  Q
    |||||| ||||||||||  |||||||||| ||||  |  || |||||||||| ||||||||||||||| |||||| |||||||||||||| | |||| ||    
T  13211051 ttaatcctggttgcaccttaaaatgacaaaatta--ctgttccataaaatttaattttcaaaaagcatcttccttttttcttggttacaccctaaaatcc 13210954  T
Q  120 ctcttc 125  Q
    ||||||    
T  13210953 ctcttc 13210948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 125
Target Start/End: Complemental strand, 15272831 - 15272728
Alignment:
Q  20 ttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaaccc 119  Q
    |||||| |||||||||  ||||||| ||| |||||  |||| |||||||||| ||||||||||||||| || ||| |||||||||||||| | |||| ||    
T  15272831 ttaatcctggttgcacttcaaaatgtcaaaattat--ccttccataaaatttaattttcaaaaagcatctttcttttttcttggttacaccctaaaatcc 15272734  T
Q  120 ctcttc 125  Q
    ||||||    
T  15272733 ctcttc 15272728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 71
Target Start/End: Original strand, 25084877 - 25084928
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaattt 71  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  25084877 agttaatcatggttgcaccccaaaatgacaagat--taccctttcataaaattt 25084928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 71
Target Start/End: Original strand, 25142850 - 25142901
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaattt 71  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  25142850 agttaatcatggttgcaccccaaaatgacaagat--taccctttcataaaattt 25142901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 20 - 108
Target Start/End: Original strand, 4621169 - 4621255
Alignment:
Q  20 ttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttaca 108  Q
    |||||| |||||||| || |||||||||| ||||  |||||||||||||||| ||||||||||||  | |||||| |||||||||||||    
T  4621169 ttaatcctggttgcatcctaaaatgacaaaatta--ccctttcataaaatttaattttcaaaaagactcttccttttttcttggttaca 4621255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 18 - 70
Target Start/End: Complemental strand, 38760587 - 38760537
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatt 70  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||    
T  38760587 agttaatcatggttgcaccccaaaatgacaagat--taccctttcataaaatt 38760537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 20 - 109
Target Start/End: Original strand, 18978473 - 18978560
Alignment:
Q  20 ttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacac 109  Q
    |||||| |||||||||||||||||||||  |||||  ||||  ||||||||| |||||||||||| || ||| || ||||||||||||||    
T  18978473 ttaatcctggttgcaccccaaaatgacagaattat--ccttctataaaatttaattttcaaaaagtatcttctttttttcttggttacac 18978560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 20 - 125
Target Start/End: Complemental strand, 43548645 - 43548543
Alignment:
Q  20 ttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaaccc 119  Q
    |||||| |||||||||||||||||||||  |||||  |||| |||||||||| ||||||||||||||| |||| | ||| || ||||||||| ||||  |    
T  43548645 ttaatcctggttgcaccccaaaatgacagaattat--ccttccataaaatttaattttcaaaaagcatcttccgt-tttttttgttacactctaaaattc 43548549  T
Q  120 ctcttc 125  Q
    ||||||    
T  43548548 ctcttc 43548543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 29 - 125
Target Start/End: Original strand, 31498869 - 31498963
Alignment:
Q  29 gttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaacccctcttc 125  Q
    ||||||| | |||||||||| ||||  ||||| |||||||||| ||||||||||||||| ||| || ||||||| |||||| | |||| ||||||||    
T  31498869 gttgcactctaaaatgacaaaatta--cccttccataaaatttaattttcaaaaagcatcttcgttttttcttgattacaccctaaaatccctcttc 31498963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 30 - 109
Target Start/End: Original strand, 37340833 - 37340910
Alignment:
Q  30 ttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacac 109  Q
    ||||| ||||||||||||  |||||  |||| |||||||||| ||||||||||||||| |||||| ||| ||||||||||    
T  37340833 ttgcatcccaaaatgacagaattat--ccttccataaaatttaattttcaaaaagcatcttcctttttttttggttacac 37340910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 58 - 125
Target Start/End: Original strand, 6245246 - 6245313
Alignment:
Q  58 ctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaacccctcttc 125  Q
    |||||||||||||| ||||||||||||  | |||||| |||||||||||||| | |||| ||||||||    
T  6245246 ctttcataaaatttaattttcaaaaagactcttccttttttcttggttacaccctaaaatccctcttc 6245313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 71
Target Start/End: Complemental strand, 19617787 - 19617736
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaattt 71  Q
    |||||||||| ||||||||||||||| |||||||  ||||||||||||||||||    
T  19617787 agttaatcatagttgcaccccaaaataacaagat--taccctttcataaaattt 19617736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 71
Target Start/End: Original strand, 29920311 - 29920362
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaattt 71  Q
    ||||||||||||||||||| |||||| |||||||  ||||||||||||||||||    
T  29920311 agttaatcatggttgcacctcaaaataacaagat--taccctttcataaaattt 29920362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 65 - 109
Target Start/End: Original strand, 38768315 - 38768359
Alignment:
Q  65 aaaatttgattttcaaaaagcatattccttctttcttggttacac 109  Q
    ||||||| ||||||||||||||| |||||| ||||||||||||||    
T  38768315 aaaatttaattttcaaaaagcatcttccttttttcttggttacac 38768359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 58 - 102
Target Start/End: Complemental strand, 35319799 - 35319755
Alignment:
Q  58 ctttcataaaatttgattttcaaaaagcatattccttctttcttg 102  Q
    ||||||||||||||||||||||||||   | ||||||||||||||    
T  35319799 ctttcataaaatttgattttcaaaaaatctcttccttctttcttg 35319755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 201; Significance: 1e-110; HSPs: 52)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 18 - 277
Target Start/End: Complemental strand, 42724258 - 42723996
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaac 117  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||    
T  42724258 agttaatcatggttgcaccccaaaatgacaagatta--ccctttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaac 42724161  T
Q  118 ccctcttccaaaaccataattctccaatcgat----tgtgttctgcgaagatttttaaatccatactttctcacg-ccattcatgatttcaaagaaaatt 212  Q
    || |||||||||||||||||||||||||||||    ||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||    
T  42724160 ccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaatt 42724061  T
Q  213 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttcttatgggttctc 277  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  42724060 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctc 42723996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 18 - 277
Target Start/End: Complemental strand, 28406515 - 28406253
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaac 117  Q
    |||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||  |||||||||||| |||||||||| |||||||    
T  28406515 agttaatcatggttgcaccccaaaatgacaagattat--cctttcataaaatttgattttcaaaaagtctattccttcttttttggttacaccccaaaac 28406418  T
Q  118 ccctcttccaaaaccataattctccaatcgat----tgtgttctgcgaagatttttaaatccatactttctcacg-ccattcatgatttcaaagaaaatt 212  Q
    || |||||||||||||||||||||||||||||    ||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||    
T  28406417 ccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaatt 28406318  T
Q  213 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttcttatgggttctc 277  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  28406317 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctc 28406253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 18 - 277
Target Start/End: Complemental strand, 37234282 - 37234020
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaac 117  Q
    ||||||| |||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||    
T  37234282 agttaattatggttgcaccccaaaatgacaagattat--cctttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaac 37234185  T
Q  118 ccctcttccaaaaccataattctccaatcgat----tgtgttctgcgaagatttttaaatccatactttctcacg-ccattcatgatttcaaagaaaatt 212  Q
    || |||||||||||||||||||||||||||||    ||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||    
T  37234184 ccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaatt 37234085  T
Q  213 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttcttatgggttctc 277  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  37234084 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctc 37234020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 18 - 277
Target Start/End: Complemental strand, 39540478 - 39540216
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaac 117  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||    
T  39540478 agttaatcatggttgcaccccaaaatgacaagatta--ccctttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaac 39540381  T
Q  118 ccctcttccaaaaccataattctccaatcgat----tgtgttctgcgaagatttttaaatccatactttctcacg-ccattcatgatttcaaagaaaatt 212  Q
    || |||||||||||||||||||||||||||||    ||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||    
T  39540380 ccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaatt 39540281  T
Q  213 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttcttatgggttctc 277  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  39540280 cgaaacaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctc 39540216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 18 - 277
Target Start/End: Complemental strand, 52913270 - 52913008
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaac 117  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||    
T  52913270 agttaatcatggttgcaccccaaaatgacaagatta--ccctttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaac 52913173  T
Q  118 ccctcttccaaaaccataattctccaa----tcgattgtgttctgcgaagatttttaaatccatactttctcacg-ccattcatgatttcaaagaaaatt 212  Q
    || ||||||||||||||||||||||||    |||||||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||    
T  52913172 ccttcttccaaaaccataattctccaaccgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaatt 52913073  T
Q  213 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttcttatgggttctc 277  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  52913072 cgaagtaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctc 52913008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 18 - 277
Target Start/End: Complemental strand, 53875187 - 53874925
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaac 117  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||  ||||||||||| |||||||||| |||||||    
T  53875187 agttaatcatggttgcaccccaaaatgacaagatta--ccctttcataaaatttgattttcaaaaagcccattccttcttttttggttacaccccaaaac 53875090  T
Q  118 ccctcttccaaaaccataattctccaa----tcgattgtgttctgcgaagatttttaaatccatactttctcacg-ccattcatgatttcaaagaaaatt 212  Q
    || ||||||||||||||||||||||||    |||||||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||    
T  53875089 ccttcttccaaaaccataattctccaaccgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaatt 53874990  T
Q  213 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttcttatgggttctc 277  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  53874989 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctc 53874925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 20 - 277
Target Start/End: Complemental strand, 19874197 - 19873937
Alignment:
Q  20 ttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaaccc 119  Q
    |||||||||||||||||| |||||||||||||||  |||||||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||||    
T  19874197 ttaatcatggttgcaccctaaaatgacaagatta--ccctttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaaccc 19874100  T
Q  120 ctcttccaaaaccataattctccaatcgat----tgtgttctgcgaagatttttaaatccatactttctcacg-ccattcatgatttcaaagaaaattcg 214  Q
     |||||||||||||||||||||||||||||    ||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||    
T  19874099 ttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaattcg 19874000  T
Q  215 aagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttcttatgggttctc 277  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  19873999 aagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctc 19873937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 20 - 277
Target Start/End: Original strand, 20434185 - 20434445
Alignment:
Q  20 ttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaaccc 119  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| |||||||||||| |||||||||| ||||||| |    
T  20434185 ttaatcatggttgcaccccaaaatgacaagatta--ccctttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaactc 20434282  T
Q  120 ctcttccaaaaccataattctccaatcgat----tgtgttctgcgaagatttttaaatccatactttctcacg-ccattcatgatttcaaagaaaattcg 214  Q
     |||||||||||||||||||||||||||||    ||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||    
T  20434283 ttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaattcg 20434382  T
Q  215 aagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttcttatgggttctc 277  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  20434383 aagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctc 20434445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 18 - 277
Target Start/End: Original strand, 42348681 - 42348943
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaac 117  Q
    |||||||||||||||||||| ||||||||||||||||  ||||||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||    
T  42348681 agttaatcatggttgcaccctaaaatgacaagattat--cctttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaac 42348778  T
Q  118 ccctcttccaaaaccataattctccaatcgat----tgtgttctgcgaagatttttaaatccatactttctcacg-ccattcatgatttcaaagaaaatt 212  Q
    || | |||||||||||||||||||||||||||    ||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||    
T  42348779 ccttattccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaatt 42348878  T
Q  213 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttcttatgggttctc 277  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  42348879 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctc 42348943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 18 - 277
Target Start/End: Complemental strand, 55215670 - 55215408
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaac 117  Q
    |||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||    
T  55215670 agttaatcatggttgcaccccaaaatgacaagattat--cctttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaac 55215573  T
Q  118 ccctcttccaaaaccataattctccaatcgat----tgtgttctgcgaagatttttaaatccatactttctcacg-ccattcatgatttcaaagaaaatt 212  Q
    || |||||||||||||||||||||||||||||    ||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||    
T  55215572 ccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaatt 55215473  T
Q  213 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttcttatgggttctc 277  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| ||||||||    
T  55215472 cgaagcaaatcaggttagcaagtgttgttattcaatcgattgtgtttttcttgttacgggttctc 55215408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 18 - 276
Target Start/End: Original strand, 613844 - 614105
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaac 117  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| |||||||||| | |||||||||| |||||||    
T  613844 agttaatcatggttgcaccccaaaatgacaagatta--ccctttcataaaatttgattttcaaaaagcctattccttctcttttggttacaccccaaaac 613941  T
Q  118 ccctcttccaaaaccataattctccaatcgat----tgtgttctgcgaagatttttaaatccatactttctcacg-ccattcatgatttcaaagaaaatt 212  Q
    || |||||||||||||||||||| ||||||||    ||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||    
T  613942 ccttcttccaaaaccataattctgcaatcgatcaattgtgttctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaatt 614041  T
Q  213 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttcttatgggttct 276  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  614042 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttct 614105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 18 - 260
Target Start/End: Complemental strand, 10542109 - 10541864
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaac 117  Q
    ||||||||||||||||||||||||||||||| ||||  |||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||    
T  10542109 agttaatcatggttgcaccccaaaatgacaatatta--ccctttcataaaatttgattttcaaaaagcatattctttctttcttggttacaccccaaaac 10542012  T
Q  118 ccctcttccaaaaccataattctccaat----cgattgtgttctgcgaagatttttaaatccatactttctcacg-ccattcatgatttcaaagaaaatt 212  Q
    ||||||||||||||||||||||||||||    ||||||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||    
T  10542011 ccctcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaatt 10541912  T
Q  213 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttt 260  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  10541911 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttt 10541864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 21 - 277
Target Start/End: Original strand, 25857564 - 25857823
Alignment:
Q  21 taatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaacccc 120  Q
    |||||||||||||||||||||||||||||||||  || ||||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||||     
T  25857564 taatcatggttgcaccccaaaatgacaagatta--ccttttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaaccct 25857661  T
Q  121 tcttccaaaaccataattctccaatcgat----tgtgttctgcgaagatttttaaatccatactttctcacg-ccattcatgatttcaaagaaaattcga 215  Q
    |||||||||||||||||||||||||||||    ||||||||||||||||||| ||| ||||||||| ||||| |||||||||||||||||||||||||||    
T  25857662 tcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttttcacgtccattcatgatttcaaagaaaattcga 25857761  T
Q  216 agcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttcttatgggttctc 277  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  25857762 agcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctc 25857823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 18 - 277
Target Start/End: Original strand, 55219888 - 55220150
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaac 117  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||    
T  55219888 agttaatcatggttgcaccccaaaatgacaagatta--ccctttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaac 55219985  T
Q  118 ccctcttccaaaaccataattctcca----atcgattgtgttctgcgaagatttttaaatccatactttctcac-gccattcatgatttcaaagaaaatt 212  Q
    || |||||||||||||||||||||||    ||||||||||||||||||||||||| ||| ||||||||||||||  ||||||||||||||||| ||||||    
T  55219986 ccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacatccattcatgatttcaaataaaatt 55220085  T
Q  213 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttcttatgggttctc 277  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||    
T  55220086 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttacgggttctc 55220150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 18 - 277
Target Start/End: Original strand, 56362839 - 56363100
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaac 117  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||| | |||||||||||| |||||||||| |||||||    
T  56362839 agttaatcatggttgcaccccaaaatgacaagatta--ccctttcataaaatttgattttcaaaaaacctattccttcttttttggttacaccccaaaac 56362936  T
Q  118 ccctcttccaaaaccataattctcca----atcgattgtgttctgcgaagatttttaaatccatactttctcacg-ccattcatgatttcaaagaaaatt 212  Q
    || |||||||||||||||||||||||    ||||||||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||    
T  56362937 ccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaatt 56363036  T
Q  213 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttcttatgggttctc 277  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||    
T  56363037 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtg-ttttcttgttatgggttctc 56363100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 18 - 278
Target Start/End: Complemental strand, 55183604 - 55183341
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaac 117  Q
    |||||||||||||||||||||||||||| |||||||  | |||||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||    
T  55183604 agttaatcatggttgcaccccaaaatgataagatta--ctctttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaac 55183507  T
Q  118 ccctcttccaaaaccataattctccaatcgat----tgtgttctgcgaagatttttaaatccatactttctcacg-ccattcatgatttcaaagaaaatt 212  Q
    || |||||||||||||||||||||||||||||    ||||||||||||||||||| ||  ||||||||||||||| ||||||||||||||||||||||||    
T  55183506 ccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaataccatactttctcacgtccattcatgatttcaaagaaaatt 55183407  T
Q  213 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttcttatgggttctct 278  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||    
T  55183406 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttacgggttctct 55183341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 18 - 277
Target Start/End: Complemental strand, 52839809 - 52839547
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaac 117  Q
    ||||||||||||||||||||||||| ||||| ||||  |||||||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||    
T  52839809 agttaatcatggttgcaccccaaaacgacaaaatta--ccctttcataaaatttgattttcaaaaagcttattccttcttttttggttacaccccaaaac 52839712  T
Q  118 ccctcttccaaaaccataattctccaatcgat----tgtgttctgcgaagatttttaaatccatactttctcacg-ccattcatgatttcaaagaaaatt 212  Q
    || |||||||||||||| ||||||||||||||    ||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||    
T  52839711 ccttcttccaaaaccatgattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaatt 52839612  T
Q  213 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttcttatgggttctc 277  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||    
T  52839611 cgaagcaaatcaggttatcaagtgttgttcttcaatcgattgtgtttttcttattatgggttctc 52839547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 18 - 277
Target Start/End: Complemental strand, 23895272 - 23895009
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttctt-ggttacactccaaaa 116  Q
    ||||||||||||||||| |||||||||||||||||||  ||||||||||||||||||||||||||||| |||||||||||| || |||||||| ||||||    
T  23895272 agttaatcatggttgcatcccaaaatgacaagattat--cctttcataaaatttgattttcaaaaagcctattccttctttttttggttacaccccaaaa 23895175  T
Q  117 cccctcttccaaaaccataattctccaa----tcgattgtgttctgcgaagatttttaaatccatactttctcacg-ccattcatgatttcaaagaaaat 211  Q
    ||  ||||||||||||||||||||||||    |||||||||||||||||||||||| ||| ||||||||||||||| |||||||||||||| ||||||||    
T  23895174 ccattcttccaaaaccataattctccaaccgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcgaagaaaat 23895075  T
Q  212 tcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttcttatgggttctc 277  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  23895074 tcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctc 23895009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 181; E-Value: 8e-98
Query Start/End: Original strand, 18 - 277
Target Start/End: Complemental strand, 38291932 - 38291670
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaac 117  Q
    |||||||||||||||||||  |||||||||||||||   ||||||||||||||||||||||||||||| |||||||||||| |||||||||| | |||||    
T  38291932 agttaatcatggttgcaccaaaaaatgacaagattaa--cctttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccctaaaac 38291835  T
Q  118 ccctcttccaaaaccataattctccaatcgat----tgtgttctgcgaagatttttaaatccatactttctcacg-ccattcatgatttcaaagaaaatt 212  Q
    || |||||||||||||||||||||||||||||    ||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||    
T  38291834 ccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaatt 38291735  T
Q  213 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttcttatgggttctc 277  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||    
T  38291734 cgaagcaaatcaggttagcaagtgttgttcttcaatccattgtgtttttcttgttatgggttctc 38291670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 181; E-Value: 8e-98
Query Start/End: Original strand, 18 - 277
Target Start/End: Complemental strand, 52307534 - 52307272
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaac 117  Q
    ||||||||||||||||| || ||||||| ||||||||  ||||||||||||||| ||||||||||||| ||||||||||||||||||||||| ||||||     
T  52307534 agttaatcatggttgcatcctaaaatgataagattat--cctttcataaaatttaattttcaaaaagcctattccttctttcttggttacaccccaaaat 52307437  T
Q  118 ccctcttccaaaaccataattctccaatcgat----tgtgttctgcgaagatttttaaatccatactttctcacg-ccattcatgatttcaaagaaaatt 212  Q
     |||||||||||||||||||||||||||||||    |||||||||||| ||||||||||  |||||||||||||| ||||||||||||||||||||||||    
T  52307436 tcctcttccaaaaccataattctccaatcgatcgattgtgttctgcgatgatttttaaaatcatactttctcacgtccattcatgatttcaaagaaaatt 52307337  T
Q  213 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttcttatgggttctc 277  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  52307336 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctc 52307272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 18 - 277
Target Start/End: Complemental strand, 53036092 - 53035833
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaac 117  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||   | |||||||||||| |||||||||| |||||||    
T  53036092 agttaatcatggttgcaccccaaaatgacaagatta--ccctttcataaaatttgattttcaaa---cctattccttcttttttggttacaccccaaaac 53035998  T
Q  118 ccctcttccaaaaccataattctccaatcgat----tgtgttctgcgaagatttttaaatccatactttctcacg-ccattcatgatttcaaagaaaatt 212  Q
    || |||||||||||||||||| ||||||||||    ||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||    
T  53035997 ccttcttccaaaaccataattatccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaatt 53035898  T
Q  213 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttcttatgggttctc 277  Q
    ||||||||||||||||||||| ||||||||||||||||||||| |||||||| ||| || |||||    
T  53035897 cgaagcaaatcaggttagcaaatgttgttcttcaatcgattgtatttttcttgttacggattctc 53035833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 18 - 149
Target Start/End: Complemental strand, 43830294 - 43830165
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaac 117  Q
    ||||||||||||||||||| ||||||||||| ||||  |||||||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||    
T  43830294 agttaatcatggttgcacctcaaaatgacaatatta--ccctttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaac 43830197  T
Q  118 ccctcttccaaaaccataattctccaatcgat 149  Q
    || |||||||||||||||||||||||||||||    
T  43830196 ccttcttccaaaaccataattctccaatcgat 43830165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 20 - 125
Target Start/End: Complemental strand, 43458466 - 43458363
Alignment:
Q  20 ttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaaccc 119  Q
    ||||||||||||||||||||||||||||| ||||  ||||| |||||||||| |||||||||||| || |||||| |||||||||||||| | |||| ||    
T  43458466 ttaatcatggttgcaccccaaaatgacaaaatta--cccttccataaaatttaattttcaaaaagtatcttccttttttcttggttacaccctaaaatcc 43458369  T
Q  120 ctcttc 125  Q
    ||||||    
T  43458368 ctcttc 43458363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 22 - 125
Target Start/End: Original strand, 11682233 - 11682334
Alignment:
Q  22 aatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaacccct 121  Q
    |||| ||||||||||| ||||||| || |||||  ||||||||||||||| ||||||||||||||| |||||| |||||||||||||| | |||| ||||    
T  11682233 aatcctggttgcaccctaaaatgataaaattat--cctttcataaaatttaattttcaaaaagcatcttccttttttcttggttacaccctaaaatccct 11682330  T
Q  122 cttc 125  Q
    ||||    
T  11682331 cttc 11682334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 22 - 125
Target Start/End: Original strand, 11690512 - 11690613
Alignment:
Q  22 aatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaacccct 121  Q
    |||| ||||||||||| ||||||| || |||||  ||||||||||||||| ||||||||||||||| |||||| |||||||||||||| | |||| ||||    
T  11690512 aatcctggttgcaccctaaaatgataaaattat--cctttcataaaatttaattttcaaaaagcatcttccttttttcttggttacaccctaaaatccct 11690609  T
Q  122 cttc 125  Q
    ||||    
T  11690610 cttc 11690613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 20 - 109
Target Start/End: Complemental strand, 35339719 - 35339632
Alignment:
Q  20 ttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacac 109  Q
    |||||| ||||||||||| |||||||||||||||  ||||| |||||||||| ||||||||||||||| ||| || ||||||||||||||    
T  35339719 ttaatcctggttgcaccctaaaatgacaagatta--cccttccataaaatttaattttcaaaaagcatcttcattttttcttggttacac 35339632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 20 - 125
Target Start/End: Original strand, 40430145 - 40430248
Alignment:
Q  20 ttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaaccc 119  Q
    |||||| ||||||||||| |||||||||| ||||  ||||| |||||||||| ||||||||||||||| ||| || |||||||||||||| | |||| ||    
T  40430145 ttaatcctggttgcaccctaaaatgacaaaatta--cccttccataaaatttaattttcaaaaagcatcttctttttttcttggttacaccctaaaatcc 40430242  T
Q  120 ctcttc 125  Q
    ||||||    
T  40430243 ctcttc 40430248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 20 - 125
Target Start/End: Complemental strand, 47467482 - 47467379
Alignment:
Q  20 ttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaaccc 119  Q
    ||||||||||||||| ||||||||||||| ||||  ||||| ||||||||||  |||| ||||||||| |||||| |||||||||||||| | |||| ||    
T  47467482 ttaatcatggttgcatcccaaaatgacaaaatta--cccttccataaaatttagtttttaaaaagcatcttccttttttcttggttacaccctaaaatcc 47467385  T
Q  120 ctcttc 125  Q
    ||||||    
T  47467384 ctcttc 47467379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 20 - 124
Target Start/End: Complemental strand, 49400 - 49298
Alignment:
Q  20 ttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaaccc 119  Q
    |||||| ||||||||| | |||||||||| ||||  |||||||||||||||| ||||| ||||||||| |||||| |||||||||||||| | |||| ||    
T  49400 ttaatcttggttgcactctaaaatgacaaaatta--ccctttcataaaatttaatttttaaaaagcatcttccttttttcttggttacaccctaaaatcc 49303  T
Q  120 ctctt 124  Q
    |||||    
T  49302 ctctt 49298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 27 - 109
Target Start/End: Original strand, 24034548 - 24034628
Alignment:
Q  27 tggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacac 109  Q
    |||||| ||||||||||||||| ||||  ||||| |||||||||| ||||||||||||||| |||||| ||||||||||||||    
T  24034548 tggttgtaccccaaaatgacaaaatta--cccttccataaaatttaattttcaaaaagcatcttccttttttcttggttacac 24034628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 20 - 109
Target Start/End: Complemental strand, 41202420 - 41202333
Alignment:
Q  20 ttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacac 109  Q
    |||||| |||||||||||||||||||||  |||||  |||| |||||||||| |||||||||| |||| |||||| ||||||||||||||    
T  41202420 ttaatcctggttgcaccccaaaatgacagaattat--ccttccataaaatttaattttcaaaatgcatcttccttttttcttggttacac 41202333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 20 - 109
Target Start/End: Original strand, 51322672 - 51322759
Alignment:
Q  20 ttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacac 109  Q
    |||||| |||||||||| |||||||| || |||||  ||||||||||||||| ||||||||||||||| || ||| ||||||||||||||    
T  51322672 ttaatcttggttgcacctcaaaatgataaaattat--cctttcataaaatttaattttcaaaaagcatttttcttttttcttggttacac 51322759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 30 - 125
Target Start/End: Original strand, 3026414 - 3026507
Alignment:
Q  30 ttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaacccctcttc 125  Q
    ||||| || |||||||||| ||||  ||||| |||||||||| ||||||||||||||| |||||| |||||||||||||| | |||| ||||||||    
T  3026414 ttgcatcctaaaatgacaaaatta--cccttccataaaatttaattttcaaaaagcatcttccttttttcttggttacaccctaaaatccctcttc 3026507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 125
Target Start/End: Original strand, 1522806 - 1522909
Alignment:
Q  20 ttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaaccc 119  Q
    |||||| |||||||| || |||||||||| ||||  | ||| |||||||||| ||||||||||||||| || ||| |||||||||||||| | |||| ||    
T  1522806 ttaatcctggttgcatcctaaaatgacaaaatta--ctcttccataaaatttaattttcaaaaagcatctttcttttttcttggttacaccctaaaatcc 1522903  T
Q  120 ctcttc 125  Q
    ||||||    
T  1522904 ctcttc 1522909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 71
Target Start/End: Original strand, 20737711 - 20737762
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaattt 71  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  20737711 agttaatcatggttgcaccccaaaatgacaagat--taccctttcataaaattt 20737762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 71
Target Start/End: Complemental strand, 56018770 - 56018719
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaattt 71  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  56018770 agttaatcatggttgcaccccaaaatgacaagat--taccctttcataaaattt 56018719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 20 - 124
Target Start/End: Original strand, 24897008 - 24897109
Alignment:
Q  20 ttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaaccc 119  Q
    |||||| ||||| |||||||||||||||| ||  ||| |||||||||||||| | ||||||||||| | |||||| ||| | |||||||| |||||||||    
T  24897008 ttaatcctggttacaccccaaaatgacaaaat--tactctttcataaaatttaagtttcaaaaagcctcttcctt-tttgtcggttacaccccaaaaccc 24897104  T
Q  120 ctctt 124  Q
    |||||    
T  24897105 ctctt 24897109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 107
Target Start/End: Original strand, 7318450 - 7318536
Alignment:
Q  20 ttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttac 107  Q
    |||||| || ||||||| |||||| |||| ||||| ||||| |||||||||| ||||||||||||||| || ||| ||||||||||||    
T  7318450 ttaatcctgattgcacctcaaaattacaaaattat-cccttccataaaatttaattttcaaaaagcatctttcttttttcttggttac 7318536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 39 - 109
Target Start/End: Complemental strand, 30217179 - 30217111
Alignment:
Q  39 aaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacac 109  Q
    |||||||||| |||||  |||| |||||||||| ||||||||||||||| |||||| ||||||||||||||    
T  30217179 aaaatgacaaaattat--ccttccataaaatttaattttcaaaaagcatcttccttttttcttggttacac 30217111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 20 - 125
Target Start/End: Complemental strand, 13962552 - 13962450
Alignment:
Q  20 ttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaaccc 119  Q
    |||||| | |||||||||||||||||||| ||||  || || |||||||||  |||||||||||||||  ||||| |||||||||||||| | |||| ||    
T  13962552 ttaatcctagttgcaccccaaaatgacaaaatta--cctttccataaaatta-attttcaaaaagcatcatccttttttcttggttacaccctaaaatcc 13962456  T
Q  120 ctcttc 125  Q
    ||||||    
T  13962455 ctcttc 13962450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 20 - 125
Target Start/End: Complemental strand, 22301819 - 22301719
Alignment:
Q  20 ttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaaccc 119  Q
    |||||| ||||||||||||||||| |||| ||  |||||||||||||||||| ||||| ||||||| | ||||||| |||| || ||||| |||||||||    
T  22301819 ttaatcctggttgcaccccaaaataacaaaat--taccctttcataaaatttaatttt-aaaaagcctcttccttc-ttctcgg-tacaccccaaaaccc 22301725  T
Q  120 ctcttc 125  Q
    ||||||    
T  22301724 ctcttc 22301719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 20 - 109
Target Start/End: Complemental strand, 43621649 - 43621562
Alignment:
Q  20 ttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacac 109  Q
    |||||| || ||||| || |||||||||| |||||  ||||| ||||||||| ||||||||||| ||| |||||| ||||||||||||||    
T  43621649 ttaatcctgattgcatcctaaaatgacaaaattat--ccttttataaaatttaattttcaaaaatcatcttccttttttcttggttacac 43621562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 92
Target Start/End: Original strand, 22847127 - 22847197
Alignment:
Q  20 ttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattcc 92  Q
    |||||| |||||||||||||||||||||  |||||  | ||||||||||||| ||||||||||||||| ||||    
T  22847127 ttaatcctggttgcaccccaaaatgacagaattat--cttttcataaaatttaattttcaaaaagcatcttcc 22847197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 20 - 87
Target Start/End: Complemental strand, 28804043 - 28803978
Alignment:
Q  20 ttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcat 87  Q
    ||||||||||||| |||| |||||||||| ||||  ||||| |||||||||| |||||||||||||||    
T  28804043 ttaatcatggttgtaccctaaaatgacaaaatta--cccttccataaaatttaattttcaaaaagcat 28803978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 39 - 125
Target Start/End: Original strand, 34159052 - 34159136
Alignment:
Q  39 aaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaacccctcttc 125  Q
    |||||||||| |||||  ||||  ||||||||| ||||||||||||||| ||| || |||||||||||||| | |||| ||||||||    
T  34159052 aaaatgacaaaattat--ccttctataaaatttaattttcaaaaagcatcttcattttttcttggttacaccctaaaatccctcttc 34159136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 54 - 125
Target Start/End: Original strand, 36851460 - 36851531
Alignment:
Q  54 taccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaacccctcttc 125  Q
    |||||||||||||||||| ||||||||||||  | |||||| |||||| ||||||| | |||| ||||||||    
T  36851460 taccctttcataaaatttaattttcaaaaagactcttccttttttcttagttacaccctaaaatccctcttc 36851531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 121
Target Start/End: Original strand, 8713247 - 8713343
Alignment:
Q  20 ttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaaccc 119  Q
    |||||| | ||| |||||||||||||||| ||||  |||||||||||||||| ||||| ||||||| | ||||||| |||| |||||||| |||||||||    
T  8713247 ttaatccttgttacaccccaaaatgacaaaatta--ccctttcataaaatttaatttt-aaaaagcctcttccttc-ttctcggttacac-ccaaaaccc 8713341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 109
Target Start/End: Original strand, 50561587 - 50561673
Alignment:
Q  20 ttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacac 109  Q
    |||||| ||||||||| | |||||||||| ||||  ||||| |||||||||  ||||||||||||||| || ||| ||||||||||||||    
T  50561587 ttaatcctggttgcactctaaaatgacaaaatta--cccttccataaaatta-attttcaaaaagcatctttcttttttcttggttacac 50561673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 64 - 125
Target Start/End: Complemental strand, 20293328 - 20293267
Alignment:
Q  64 taaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaacccctcttc 125  Q
    |||||||| |||||||||| |||| |||||| |||||||||||||| | |||| ||||||||    
T  20293328 taaaatttaattttcaaaatgcatcttccttttttcttggttacaccctaaaatccctcttc 20293267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 125
Target Start/End: Original strand, 48990368 - 48990468
Alignment:
Q  20 ttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaaccc 119  Q
    |||||| | ||||||||| ||||||| || ||||  ||||| |||||||||| ||||||||||||||   || || |||||||||||||| | |||| ||    
T  48990368 ttaatcctcgttgcaccctaaaatgataaaatta--cccttccataaaatttaattttcaaaaagca---tctttttttcttggttacaccctaaaatcc 48990462  T
Q  120 ctcttc 125  Q
    ||||||    
T  48990463 ctcttc 48990468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 27 - 109
Target Start/End: Original strand, 32932614 - 32932694
Alignment:
Q  27 tggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacac 109  Q
    |||||||| | ||||||||||| |||| |   ||||||||||||| ||||| ||||||||| ||| || ||||||||||||||    
T  32932614 tggttgcatctcaaaatgacaaaattacat--tttcataaaatttaattttaaaaaagcatcttctttttttcttggttacac 32932694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 71
Target Start/End: Original strand, 31709738 - 31709787
Alignment:
Q  20 ttaatcatggttgcaccccaaaatgacaagattataccctttcataaaattt 71  Q
    |||||||||||||||||  ||||||||||||||||  ||||| |||||||||    
T  31709738 ttaatcatggttgcaccttaaaatgacaagattat--ccttttataaaattt 31709787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 201; Significance: 1e-110; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 18 - 277
Target Start/End: Complemental strand, 45505849 - 45505587
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaac 117  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||| ||||||||||||| |||||||||||| |||||||||| |||||||    
T  45505849 agttaatcatggttgcaccccaaaatgacaagatta--ccctttcataaaatttaattttcaaaaagcctattccttcttttttggttacaccccaaaac 45505752  T
Q  118 ccctcttccaaaaccataattctccaatcgat----tgtgttctgcgaagatttttaaatccatactttctcacg-ccattcatgatttcaaagaaaatt 212  Q
    || |||||||||||||||||||||||||||||    ||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  45505751 ccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagatttttaaaaccatactttctcacgtccattcatgatttcaaagaaaatt 45505652  T
Q  213 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttcttatgggttctc 277  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  45505651 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctc 45505587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 18 - 277
Target Start/End: Original strand, 1481832 - 1482094
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaac 117  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||    
T  1481832 agttaatcatggttgcaccccaaaatgacaagatta--ccctttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaac 1481929  T
Q  118 ccctcttccaaaaccataattctccaatcgat----tgtgttctgcgaagatttttaaatccatactttctcacg-ccattcatgatttcaaagaaaatt 212  Q
    || |||||||||||||||||||||||||||||    ||||||||||||||||||| ||| ||||| ||||||||| ||||||||||||||||||||||||    
T  1481930 ccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatattttctcacgtccattcatgatttcaaagaaaatt 1482029  T
Q  213 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttcttatgggttctc 277  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  1482030 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctc 1482094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 18 - 277
Target Start/End: Complemental strand, 25853496 - 25853234
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaac 117  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||    
T  25853496 agttaatcatggttgcaccccaaaatgacaagatta--ccctttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaac 25853399  T
Q  118 ccctcttccaaaaccataattctccaatcgat----tgtgttctgcgaagatttttaaatccatactttctcacg-ccattcatgatttcaaagaaaatt 212  Q
    || |||||||||||||||||||||||||||||    ||||||||||||||||||| ||| ||||||||| ||||| ||||||||||||||||||||||||    
T  25853398 ccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttttcacgtccattcatgatttcaaagaaaatt 25853299  T
Q  213 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttcttatgggttctc 277  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  25853298 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctc 25853234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 18 - 277
Target Start/End: Complemental strand, 39697841 - 39697579
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaac 117  Q
    |||||||||| |||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||    
T  39697841 agttaatcatagttgcaccccaaaatgacaagatta--ccctttcataaaatttgattttcaaaaagcatattccttcttttttggttacaccccaaaac 39697744  T
Q  118 ccctcttccaaaaccataattctccaat----cgattgtgttctgcgaagatttttaaatccatactttctcacg-ccattcatgatttcaaagaaaatt 212  Q
    || |||||||||||||||||||||||||    ||||||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||    
T  39697743 ccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaatt 39697644  T
Q  213 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttcttatgggttctc 277  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  39697643 agaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctc 39697579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 18 - 277
Target Start/End: Original strand, 1520197 - 1520459
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaac 117  Q
    |||||||||||||||||||||||||||| |||||||  |||||||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||    
T  1520197 agttaatcatggttgcaccccaaaatgataagatta--ccctttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaac 1520294  T
Q  118 ccctcttccaaaaccataattctccaatcgat----tgtgttctgcgaagatttttaaatccatactttctcacg-ccattcatgatttcaaagaaaatt 212  Q
    || |||||||||||||||||||||||||||||    ||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||    
T  1520295 ccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaatt 1520394  T
Q  213 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttcttatgggttctc 277  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||    
T  1520395 cgaagcaaatcaggttagcaagtgttgttcttcaatcaattgtgtttttcttgttatgggttctc 1520459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 18 - 277
Target Start/End: Original strand, 43577024 - 43577286
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaac 117  Q
    |||||||||||||||||||| |||||||||||||||  |||||||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||    
T  43577024 agttaatcatggttgcaccctaaaatgacaagatta--ccctttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaac 43577121  T
Q  118 ccctcttccaaaaccataattctccaatcgat----tgtgttctgcgaagatttttaaatccatactttctcacg-ccattcatgatttcaaagaaaatt 212  Q
    || |||||||||||||||||||||||||||||    ||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||    
T  43577122 ccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaatt 43577221  T
Q  213 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttcttatgggttctc 277  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  43577222 cgaagcaaatcaggttagcaagtgttgttcttgaatcgattgtgtttttcttgttatgggttctc 43577286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 18 - 277
Target Start/End: Original strand, 44143381 - 44143643
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaac 117  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||    
T  44143381 agttaatcatggttgcaccccaaaatgacaagatta--ccctttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaac 44143478  T
Q  118 ccctcttccaaaaccataattctccaatcgat----tgtgttctgcgaagatttttaaatccatactttctcacg-ccattcatgatttcaaagaaaatt 212  Q
    || |||||||||||||||||||||||||||||    |||||| |||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||    
T  44143479 ccttcttccaaaaccataattctccaatcgatcgattgtgttatgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaatt 44143578  T
Q  213 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttcttatgggttctc 277  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  44143579 tgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctc 44143643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 18 - 277
Target Start/End: Complemental strand, 2390750 - 2390489
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaac 117  Q
    |||||||||||||||||||| ||||||||||||||||  ||||||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||    
T  2390750 agttaatcatggttgcaccctaaaatgacaagattat--cctttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaac 2390653  T
Q  118 ccctcttccaaaaccataattctccaat----cgattgtgttctgcgaagatttttaaatccatactttctcacg-ccattcatgatttcaaagaaaatt 212  Q
    || |||||||||||||||||||||||||    ||||||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||    
T  2390652 ccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaatt 2390553  T
Q  213 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttcttatgggttctc 277  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||    
T  2390552 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtg-ttttcttgttatgggttctc 2390489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 18 - 277
Target Start/End: Original strand, 34202300 - 34202562
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaac 117  Q
    |||||||||||||| ||||||||||||||||||||||  ||||||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||    
T  34202300 agttaatcatggttacaccccaaaatgacaagattat--cctttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaac 34202397  T
Q  118 ccctcttccaaaaccataattctccaatcgattg----tgttctgcgaagatttttaaatccatactttctcacg-ccattcatgatttcaaagaaaatt 212  Q
    || ||||| |||||||||||||||||||||||||    ||||||||||||||||| ||| ||||| ||||||||| ||||||||||||||||||||||||    
T  34202398 ccttcttcaaaaaccataattctccaatcgattgattgtgttctgcgaagattttcaaaaccatattttctcacgtccattcatgatttcaaagaaaatt 34202497  T
Q  213 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttcttatgggttctc 277  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  34202498 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctc 34202562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 18 - 277
Target Start/End: Original strand, 10638799 - 10639060
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaac 117  Q
    |||||||||||||||||||| |||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |    
T  10638799 agttaatcatggttgcaccctaaaatgacaagatta--ccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacaccccaaa-c 10638895  T
Q  118 ccctcttccaaaaccataattctccaatcgattg----tgttctgcgaagatttttaaatccatactttctcacg-ccattcatgatttcaaagaaaatt 212  Q
    |||||||||||||||||||||||||||||||| |    |||| |||||||||||| ||| ||||||||||||||| ||||||||| ||| ||||||||||    
T  10638896 ccctcttccaaaaccataattctccaatcgatcgattctgttatgcgaagattttcaaaaccatactttctcacgtccattcatggttttaaagaaaatt 10638995  T
Q  213 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttcttatgggttctc 277  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  10638996 cgaagcaaatcaggttagcaagtgttgttcttcaatcaattgtgtttttcttcttatgggttctc 10639060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 18 - 277
Target Start/End: Original strand, 21657948 - 21658209
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaac 117  Q
    |||||||||||||||||||| ||||||||||||||||  ||||||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||    
T  21657948 agttaatcatggttgcaccctaaaatgacaagattat--cctttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaac 21658045  T
Q  118 ccctcttccaaaaccataattctcca----atcgattgtgttctgcgaagatttttaaatccatactttctcacg-ccattcatgatttcaaagaaaatt 212  Q
    || |||||||||||||||||||||||    ||||||||||||||||||||||||| ||| | ||||||||||||| ||||||||||||||||||||||||    
T  21658046 ccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaactatactttctcacgtccattcatgatttcaaagaaaatt 21658145  T
Q  213 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttcttatgggttctc 277  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||    
T  21658146 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtg-ttttcttgttatgggttctc 21658209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 18 - 277
Target Start/End: Complemental strand, 40811836 - 40811575
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaac 117  Q
    |||||||||||||||||||||||||||| ||||||||  ||||||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||    
T  40811836 agttaatcatggttgcaccccaaaatgaaaagattat--cctttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaac 40811739  T
Q  118 ccctcttccaaaaccataattctccaatc----gattgtgttctgcgaagatttttaaatccatactttctcacg-ccattcatgatttcaaagaaaatt 212  Q
    || ||||||||||||||||||||||||||    |||||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||    
T  40811738 ccttcttccaaaaccataattctccaatcgatagattgtgttctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaatt 40811639  T
Q  213 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttcttatgggttctc 277  Q
     ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||    
T  40811638 tgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtg-ttttcttgttatgggttctc 40811575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 18 - 277
Target Start/End: Original strand, 42342989 - 42343250
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaac 117  Q
    |||||||||||||||||||||||||||| ||||||||  ||||||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||    
T  42342989 agttaatcatggttgcaccccaaaatgataagattat--cctttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaac 42343086  T
Q  118 ccctcttccaaaaccataattctcca----atcgattgtgttctgcgaagatttttaaatccatactttctcacg-ccattcatgatttcaaagaaaatt 212  Q
    || |||| ||||||||||||||||||    ||||||||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||    
T  42343087 ccttctttcaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaatt 42343186  T
Q  213 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttcttatgggttctc 277  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||    
T  42343187 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtg-ttttcttgttatgggttctc 42343250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 18 - 271
Target Start/End: Original strand, 3178247 - 3178503
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaac 117  Q
    |||||||||||||||||||| ||||||| |||||||  |||||||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||    
T  3178247 agttaatcatggttgcaccctaaaatgataagatta--ccctttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaac 3178344  T
Q  118 ccctcttccaaaaccataattctcca----atcgattgtgttctgcgaagatttttaaatccatactttctcacg-ccattcatgatttcaaagaaaatt 212  Q
    || ||||||||| |||||||||||||    ||||||||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||    
T  3178345 ccttcttccaaagccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaatt 3178444  T
Q  213 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttcttatgg 271  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||    
T  3178445 cgaagcaaatcaggttaacaagtgttgttcttcaatcgattgtgtttttcttgttatgg 3178503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 18 - 277
Target Start/End: Complemental strand, 13196201 - 13195940
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaac 117  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| ||||||||||||  ||||||||| |||||||    
T  13196201 agttaatcatggttgcaccccaaaatgacaagatta--ccctttcataaaatttgattttcaaaaagcctattccttcttttgtggttacaccccaaaac 13196104  T
Q  118 ccctcttccaaaaccataattctccaat----cgattgtgttctgcgaagatttttaaatccatactttctcacg-ccattcatgatttcaaagaaaatt 212  Q
    || |||||||||||||||||||||||||    ||||||||||||||||||||||| ||| ||||||||||||||| | ||||||||||||||||||||||    
T  13196103 ccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtctattcatgatttcaaagaaaatt 13196004  T
Q  213 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttcttatgggttctc 277  Q
     ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| ||||||    
T  13196003 tgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtg-ttttcttgttatgagttctc 13195940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 18 - 277
Target Start/End: Original strand, 37094109 - 37094371
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaac 117  Q
    |||||||||||||||||  ||||||||| ||||||||  | ||||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||    
T  37094109 agttaatcatggttgcataccaaaatgataagattat--cttttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaac 37094206  T
Q  118 ccctcttccaaaaccataattctccaatcgat----tgtgttctgcgaagatttttaaatccatactttctcacg-ccattcatgatttcaaagaaaatt 212  Q
    || |||||||||||||||||||||||||||||    |||||||||| |||||||| ||| ||||||||||||||| ||||||||||||||||||||||||    
T  37094207 ccttcttccaaaaccataattctccaatcgatcgattgtgttctgcaaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaatt 37094306  T
Q  213 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttcttatgggttctc 277  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||    
T  37094307 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttgtgggttctc 37094371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 139; E-Value: 9e-73
Query Start/End: Original strand, 18 - 277
Target Start/End: Original strand, 927085 - 927327
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaac 117  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| ||||||||||||      ||||| |||||||    
T  927085 agttaatcatggttgcaccccaaaatgacaagatta--ccctttcataaaatttgattttcaaaaagcctattccttcttt------tacaccccaaaac 927176  T
Q  118 ccctcttccaaaaccataattctccaatcgat----tgtgttctgcgaagatttttaaatccatactttctcacg-ccattcatgatttcaaagaaaatt 212  Q
    |              |||||||||||||||||    ||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||    
T  927177 c--------------ataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaatt 927262  T
Q  213 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttcttatgggttctc 277  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  927263 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctc 927327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 68 - 277
Target Start/End: Original strand, 874953 - 875154
Alignment:
Q  68 atttgattttcaaaaagcatattccttctttcttggttacactccaaaacccctcttccaaaaccataattctccaatc----gattgtgttctgcgaag 163  Q
    |||||||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||    ||| ||||||||||||     
T  874953 atttgattttcaaaaagcctattccttatttcttggttacaccccaaaacccctcttccaaaaccataattctccaatcaatcgatcgtgttctgcgaa- 875051  T
Q  164 atttttaaatccatactttctcacg-ccattcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttc 262  Q
                ||||| ||||||| ||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  875052 ------------atactctctcacgtccattcacgatttcaaagaaaattcaaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttc 875139  T
Q  263 ttcttatgggttctc 277  Q
    || ||||||||||||    
T  875140 ttgttatgggttctc 875154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 18 - 178
Target Start/End: Original strand, 15011840 - 15012002
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaac 117  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||    
T  15011840 agttaatcatggttgcaccccaaaatgacaagatta--ccctttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaac 15011937  T
Q  118 ccctcttccaaaaccataattctcca----atcgattgtgttctgcgaagatttttaaatccata 178  Q
    || |||||||||||||||||||||||    ||||||||||||||||||||||||| ||| |||||    
T  15011938 ccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccata 15012002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 20 - 125
Target Start/End: Complemental strand, 13480611 - 13480508
Alignment:
Q  20 ttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaaccc 119  Q
    |||||| || |||||||  |||||||||| ||||  |||||||||||||||| ||||||||||||||| |||||| |||||||||||||| | |||| ||    
T  13480611 ttaatcctgattgcaccttaaaatgacaaaatta--ccctttcataaaatttaattttcaaaaagcattttccttttttcttggttacaccctaaaatcc 13480514  T
Q  120 ctcttc 125  Q
    ||||||    
T  13480513 ctcttc 13480508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 20 - 124
Target Start/End: Original strand, 26170999 - 26171101
Alignment:
Q  20 ttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaaccc 119  Q
    |||||| ||||||||||||||||| |||| ||||  ||||| |||||||||| ||||||||||||||| ||  || |||||||||||||| | |||| ||    
T  26170999 ttaatcttggttgcaccccaaaataacaaaatta--cccttccataaaatttaattttcaaaaagcatcttttttttttcttggttacaccctaaaatcc 26171096  T
Q  120 ctctt 124  Q
    |||||    
T  26171097 ctctt 26171101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 54 - 109
Target Start/End: Complemental strand, 44456842 - 44456787
Alignment:
Q  54 taccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacac 109  Q
    |||||||||||||||||| ||||||||||||||| |||||| ||||||||||||||    
T  44456842 taccctttcataaaatttaattttcaaaaagcatcttccttttttcttggttacac 44456787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 125
Target Start/End: Complemental strand, 4331943 - 4331840
Alignment:
Q  20 ttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaaccc 119  Q
    |||||| |||||||| || |||||||||| ||||  |||||||||||||||| ||||||||||||    |||||| |||||||||||||| | |||| ||    
T  4331943 ttaatcctggttgcatcctaaaatgacaaaatta--ccctttcataaaatttaattttcaaaaagacacttccttttttcttggttacaccctaaaatcc 4331846  T
Q  120 ctcttc 125  Q
    ||||||    
T  4331845 ctcttc 4331840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 125
Target Start/End: Complemental strand, 38629471 - 38629368
Alignment:
Q  20 ttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaaccc 119  Q
    |||||| |||||||| || ||||||| || |||||  ||||||||||||||| ||||||||||||  | |||||| |||||||||||||| | |||| ||    
T  38629471 ttaatcctggttgcatcctaaaatgataaaattat--cctttcataaaatttaattttcaaaaagactcttccttttttcttggttacaccctaaaatcc 38629374  T
Q  120 ctcttc 125  Q
    ||||||    
T  38629373 ctcttc 38629368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 18 - 70
Target Start/End: Complemental strand, 32551731 - 32551681
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatt 70  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||    
T  32551731 agttaatcatggttgcaccccaaaatgacaagat--taccctttcataaaatt 32551681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 33 - 108
Target Start/End: Complemental strand, 31569708 - 31569635
Alignment:
Q  33 caccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttaca 108  Q
    ||||| |||||||||| |||||  |||| |||||||||| ||||||||||||||| |||||| |||||||||||||    
T  31569708 caccctaaaatgacaaaattat--ccttccataaaatttaattttcaaaaagcatcttccttttttcttggttaca 31569635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 27 - 109
Target Start/End: Complemental strand, 7722728 - 7722648
Alignment:
Q  27 tggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacac 109  Q
    |||||||||| |||||||| || ||||  ||||| |||||||||| |||| |||||||||| |||||| ||||||||||||||    
T  7722728 tggttgcacctcaaaatgataaaatta--cccttccataaaatttaatttacaaaaagcatcttccttttttcttggttacac 7722648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 54 - 124
Target Start/End: Complemental strand, 45443585 - 45443516
Alignment:
Q  54 taccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaacccctctt 124  Q
    |||||||||||||||||| ||||||||||||| | ||| || ||||| |||||||| ||||||||||||||    
T  45443585 taccctttcataaaatttaattttcaaaaagcctcttcatt-tttctcggttacaccccaaaacccctctt 45443516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 70
Target Start/End: Original strand, 35895513 - 35895563
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatt 70  Q
    |||||||||||||||||| |||||||||||||||  |||||||||||||||||    
T  35895513 agttaatcatggttgcactccaaaatgacaagat--taccctttcataaaatt 35895563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 124
Target Start/End: Original strand, 44798832 - 44798933
Alignment:
Q  20 ttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaaccc 119  Q
    |||||| ||||| |||  ||||||||||| ||||  | |||||||||||||| | ||||||||||| | |||||| ||||| |||||||| |||||||||    
T  44798832 ttaatcctggttacacttcaaaatgacaaaatta--ctctttcataaaatttaagtttcaaaaagcctcttcctt-tttctcggttacaccccaaaaccc 44798928  T
Q  120 ctctt 124  Q
    |||||    
T  44798929 ctctt 44798933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 20 - 71
Target Start/End: Complemental strand, 27980973 - 27980924
Alignment:
Q  20 ttaatcatggttgcaccccaaaatgacaagattataccctttcataaaattt 71  Q
    |||||||||||| ||||||||||||||||||||||  |||||||||||||||    
T  27980973 ttaatcatggttacaccccaaaatgacaagattat--cctttcataaaattt 27980924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 20 - 71
Target Start/End: Complemental strand, 28067503 - 28067454
Alignment:
Q  20 ttaatcatggttgcaccccaaaatgacaagattataccctttcataaaattt 71  Q
    |||||||||||| ||||||||||||||||||||||  |||||||||||||||    
T  28067503 ttaatcatggttacaccccaaaatgacaagattat--cctttcataaaattt 28067454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 63 - 109
Target Start/End: Complemental strand, 458630 - 458584
Alignment:
Q  63 ataaaatttgattttcaaaaagcatattccttctttcttggttacac 109  Q
    ||||||||| ||||||||||||||| |||||| ||||||||||||||    
T  458630 ataaaatttaattttcaaaaagcatcttccttttttcttggttacac 458584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 58 - 109
Target Start/End: Complemental strand, 16313609 - 16313558
Alignment:
Q  58 ctttcataaaatttgattttcaaaaagcatattccttctttcttggttacac 109  Q
    |||| ||||||||| ||||||||||||||| |||||| ||||||| ||||||    
T  16313609 cttttataaaatttaattttcaaaaagcatcttccttttttcttgcttacac 16313558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 201; Significance: 1e-110; HSPs: 49)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 18 - 277
Target Start/End: Complemental strand, 34270836 - 34270574
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaac 117  Q
    |||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||    
T  34270836 agttaatcatggttgcaccccaaaatgacaagattat--cctttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaac 34270739  T
Q  118 ccctcttccaaaaccataattctccaatcgat----tgtgttctgcgaagatttttaaatccatactttctcacg-ccattcatgatttcaaagaaaatt 212  Q
    || |||||||||||||||||||||||||||||    ||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||    
T  34270738 ccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttaaaaaccatactttctcacgtccattcatgatttcaaagaaaatt 34270639  T
Q  213 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttcttatgggttctc 277  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  34270638 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctc 34270574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 18 - 277
Target Start/End: Complemental strand, 39569518 - 39569256
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaac 117  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||    
T  39569518 agttaatcatggttgcaccccaaaatgacaagatta--ccctttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaac 39569421  T
Q  118 ccctcttccaaaaccataattctccaatcgattg----tgttctgcgaagatttttaaatccatactttctcacg-ccattcatgatttcaaagaaaatt 212  Q
    || ||||||||||||||||||||||||||||| |    ||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||    
T  39569420 ccttcttccaaaaccataattctccaatcgatcgatcgtgttctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaatt 39569321  T
Q  213 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttcttatgggttctc 277  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  39569320 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctc 39569256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 18 - 277
Target Start/End: Complemental strand, 52044452 - 52044190
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaac 117  Q
    |||||||||||||||||||||||||||| |||||||  |||||||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||    
T  52044452 agttaatcatggttgcaccccaaaatgataagatta--ccctttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaac 52044355  T
Q  118 ccctcttccaaaaccataattctccaatcgat----tgtgttctgcgaagatttttaaatccatactttctcacg-ccattcatgatttcaaagaaaatt 212  Q
    || |||||||||||||||||||||||||||||    ||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||    
T  52044354 ccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaatt 52044255  T
Q  213 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttcttatgggttctc 277  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  52044254 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctc 52044190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 18 - 277
Target Start/End: Original strand, 44721892 - 44722154
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaac 117  Q
    |||||||||||||||||||||||||||| |||||||  |||||||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||    
T  44721892 agttaatcatggttgcaccccaaaatgataagatta--ccctttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaac 44721989  T
Q  118 ccctcttccaaaaccataattctccaatcgat----tgtgttctgcgaagatttttaaatccatactttctcacg-ccattcatgatttcaaagaaaatt 212  Q
    || ||||||||||||||||||||| |||||||    ||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||    
T  44721990 ccttcttccaaaaccataattctctaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaatt 44722089  T
Q  213 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttcttatgggttctc 277  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  44722090 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctc 44722154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 18 - 277
Target Start/End: Original strand, 52024746 - 52025008
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaac 117  Q
    |||||||||||||||||||||||||||||| |||||  |||||||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||    
T  52024746 agttaatcatggttgcaccccaaaatgacaggatta--ccctttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaac 52024843  T
Q  118 ccctcttccaaaaccataattctccaatcgat----tgtgttctgcgaagatttttaaatccatactttctcacg-ccattcatgatttcaaagaaaatt 212  Q
    || |||||||||||||||||||||||||||||    ||||||||||||||||||| ||| ||||||||||||| | ||||||||||||||||||||||||    
T  52024844 ccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcatgtccattcatgatttcaaagaaaatt 52024943  T
Q  213 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttcttatgggttctc 277  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  52024944 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctc 52025008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 18 - 277
Target Start/End: Original strand, 42948210 - 42948473
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaac 117  Q
    |||||||||||||||||||| |||||||||||||||  |||||||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||    
T  42948210 agttaatcatggttgcaccctaaaatgacaagatta--ccctttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaac 42948307  T
Q  118 ccctcttccaaaaccataattctcca----atcgattgtgttctgcgaagatttttaaatccatactttctcacg-ccattcatgatttcaaagaaaatt 212  Q
    || |||||||||||||||||||||||    ||||||||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||    
T  42948308 ccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaatt 42948407  T
Q  213 cgaagcaaatcaggttagcaagtgttgttcttc-aatcgattgtgtttttcttcttatgggttctc 277  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  42948408 cgaagcaaatcaggttagcaagtgttgttcttcaaatcgattgtgtttttcttgttatgggttctc 42948473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 18 - 277
Target Start/End: Original strand, 6653245 - 6653507
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaac 117  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||||| ||||||||||| |||||||||||| |||||||||| |||||||    
T  6653245 agttaatcatggttgcaccccaaaatgacaagatta--ccctttcataaaatttgactttcaaaaagcctattccttcttttttggttacaccccaaaac 6653342  T
Q  118 ccctcttccaaaaccataattctccaatcgat----tgtgttctgcgaagatttttaaatccatactttctcacg-ccattcatgatttcaaagaaaatt 212  Q
     | |||||||||| ||||||||||||||||||    ||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||    
T  6653343 tcttcttccaaaatcataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaatt 6653442  T
Q  213 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttcttatgggttctc 277  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  6653443 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctc 6653507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 18 - 277
Target Start/End: Complemental strand, 26151228 - 26150966
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaac 117  Q
    |||||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||||||||||||||||||| |||||||||| | |||||    
T  26151228 agttaatcatggttgcaccccaaaatgataagattat--cctttcataaaatttgattttcaaaaagcatattccttcttttttggttacaccctaaaac 26151131  T
Q  118 ccctcttccaaaaccataattctccaatcgat----tgtgttctgcgaagatttttaaatccatactttctcacg-ccattcatgatttcaaagaaaatt 212  Q
     | |||| ||||||||||||||||||||||||    ||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||    
T  26151130 tcttctttcaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaatt 26151031  T
Q  213 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttcttatgggttctc 277  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  26151030 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctc 26150966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 18 - 260
Target Start/End: Original strand, 40400054 - 40400299
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaac 117  Q
    ||||||||||||||||||||||||||||||| ||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  40400054 agttaatcatggttgcaccccaaaatgacaatatta--ccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacatcccaaaac 40400151  T
Q  118 ccctcttccaaaaccataattctcca----atcgattgtgttctgcgaagatttttaaatccatactttctcacg-ccattcatgatttcaaagaaaatt 212  Q
    ||||||||||||||||||||||||||    ||||||||||||||||||||||||| ||| ||||||||||||||| ||||||| ||||||||||||||||    
T  40400152 ccctcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccattcaggatttcaaagaaaatt 40400251  T
Q  213 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttt 260  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  40400252 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttt 40400299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 18 - 277
Target Start/End: Original strand, 20581520 - 20581781
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaac 117  Q
    ||||||||||||||||||||||||||||||| ||||  |||||||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||    
T  20581520 agttaatcatggttgcaccccaaaatgacaaaatta--ccctttcataaaatttgattttcaaaaagcctattccttcttttttggttacac-ccaaaac 20581616  T
Q  118 ccctcttccaaaaccataattctccaatcgat----tgtgttctgcgaagatttttaaatccatactttctcacg-ccattcatgatttcaaagaaaatt 212  Q
    ||||||||||||||||||||||||||||||||    |||||||| |||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||    
T  20581617 ccctcttccaaaaccataattctccaatcgatcgattgtgttcttcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaatt 20581716  T
Q  213 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttcttatgggttctc 277  Q
    |||||||||| | ||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  20581717 cgaagcaaattatgttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctc 20581781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 18 - 261
Target Start/End: Complemental strand, 33010849 - 33010603
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaac 117  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||    
T  33010849 agttaatcatggttgcaccccaaaatgacaagatta--ccctttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaac 33010752  T
Q  118 ccctcttccaaaaccataattctccaat----cgattgtgttctgcgaagatttttaaatccatactttctcacg-ccattcatgatttcaaagaaaatt 212  Q
    || |||||||||||||||||||||||||    |||||||||| |||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||    
T  33010751 ccttcttccaaaaccataattctccaatcgatcgattgtgttttgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaatt 33010652  T
Q  213 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgttttt 261  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  33010651 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgttttt 33010603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 181; E-Value: 8e-98
Query Start/End: Original strand, 18 - 277
Target Start/End: Original strand, 18909236 - 18909498
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaac 117  Q
    |||||||||||||||||  |||||||||||| ||||  |||||||||||||||||||||||||||||| ||||| |||||| |||||||||| |||||||    
T  18909236 agttaatcatggttgcattccaaaatgacaatatta--ccctttcataaaatttgattttcaaaaagcctattctttcttttttggttacaccccaaaac 18909333  T
Q  118 ccctcttccaaaaccataattctccaatcgat----tgtgttctgcgaagatttttaaatccatactttctcacg-ccattcatgatttcaaagaaaatt 212  Q
    || |||||||||||||||||||||||||||||    ||||||||||||||||||| ||| ||||| ||||||||| ||||||||||||||||||||||||    
T  18909334 ccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatattttctcacgtccattcatgatttcaaagaaaatt 18909433  T
Q  213 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttcttatgggttctc 277  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  18909434 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctc 18909498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 181; E-Value: 8e-98
Query Start/End: Original strand, 18 - 277
Target Start/End: Original strand, 24317202 - 24317462
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaac 117  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||    
T  24317202 agttaatcatggttgcaccccaaaatgacaagatta--ccctttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaac 24317299  T
Q  118 ccctcttccaaaaccataattctccaatcgat----tgtgttctgcgaagatttttaaatccatactttctcacg-ccattcatgatttcaaagaaaatt 212  Q
    || ||||||||| |||||||||||||||||||    ||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||    
T  24317300 ccttcttccaaa-ccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaatt 24317398  T
Q  213 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttcttatgggttctc 277  Q
    ||||||||||||||||||||||||||||||||||||||||| || ||||||| ||||||||||||    
T  24317399 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattatg-ttttcttgttatgggttctc 24317462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 181; E-Value: 8e-98
Query Start/End: Original strand, 18 - 277
Target Start/End: Original strand, 50727818 - 50728080
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaac 117  Q
    |||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||| |||||||| ||| || ||||||| |||||||    
T  50727818 agttaatcatggttgcaccccaaaatgacaagattat--cctttcataaaatttgattttcaaaaagcctattccttttttttttgttacaccccaaaac 50727915  T
Q  118 ccctcttccaaaaccataattctccaatcgat----tgtgttctgcgaagatttttaaatccatactttctcacg-ccattcatgatttcaaagaaaatt 212  Q
    || |||||||||||||||||||||||||||||    ||||||||||||||||||| |||  |||||||||||||| ||||||||||||||||||||||||    
T  50727916 ccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaatcatactttctcacgtccattcatgatttcaaagaaaatt 50728015  T
Q  213 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttcttatgggttctc 277  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||| || |||||||||    
T  50728016 cgaagcaaatcaggttagcaagtgttgttcttcaattgattgtgtttttcttgttgtgggttctc 50728080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 18 - 277
Target Start/End: Complemental strand, 2138308 - 2138046
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaac 117  Q
    ||||||||||||||||||| |||||||| |||||||  |||||||||||||||||||||||||||| | |||||||||||| |||||||||| |||||||    
T  2138308 agttaatcatggttgcacctcaaaatgataagatta--ccctttcataaaatttgattttcaaaaaacctattccttcttttttggttacaccccaaaac 2138211  T
Q  118 ccctcttccaaaaccataattctccaat----cgattgtgttctgcgaagatttttaaatccatactttctcacgc-cattcatgatttcaaagaaaatt 212  Q
    || ||||||||||| |||||||||||||    ||||||||||||||||||||||| ||| |||||||||||||||  |||||||||||||||||||||||    
T  2138210 ccttcttccaaaactataattctccaattgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgttcattcatgatttcaaagaaaatt 2138111  T
Q  213 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttcttatgggttctc 277  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  2138110 cgaagcaaatcaagttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctc 2138046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 18 - 277
Target Start/End: Complemental strand, 2482695 - 2482430
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaac 117  Q
    ||||||||||||||||||||||||||||||| ||||  |||||||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||    
T  2482695 agttaatcatggttgcaccccaaaatgacaatatta--ccctttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaac 2482598  T
Q  118 ccctcttccaaaaccataattctccaat----cgattgtgttctgcgaagatttttaaatccatactttctcacg-----ccattcatgatttcaaagaa 208  Q
    || |||||||||||||||||||||||||    |||||||||||||| |||||||| ||| |||||||||||||||     |||||||||||||||||| |    
T  2482597 ccttcttccaaaaccataattctccaatcgatcgattgtgttctgcaaagattttcaaaaccatactttctcacgtccgtccattcatgatttcaaag-a 2482499  T
Q  209 aattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttcttatgggttctc 277  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  2482498 aattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctc 2482430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 20 - 277
Target Start/End: Original strand, 13942166 - 13942426
Alignment:
Q  20 ttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaaccc 119  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||| |||||||||||| |||||||||| ||||||| |    
T  13942166 ttaatcatggttgcaccccaaaatgacaagattat--cctttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaactc 13942263  T
Q  120 ctcttccaaaaccataattctcca----atcgattgtgttctgcgaagatttttaaatccatactttctcacg-ccattcatgatttcaaagaaaattcg 214  Q
     |||||||||||||||||||||||    |||||||||||| | |||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||      
T  13942264 ttcttccaaaaccataattctccaatcgatcgattgtgtttttcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaattta 13942363  T
Q  215 aagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttcttatgggttctc 277  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  13942364 aagcaaatcaggttagcaagtgttgttcttcactcgattgtgtttttcttattatgggttctc 13942426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 173; E-Value: 5e-93
Query Start/End: Original strand, 18 - 277
Target Start/End: Complemental strand, 51677311 - 51677049
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaac 117  Q
    |||||||||| ||||||  | ||||||||||||||||  |||||||||||||||||||| |||||||| |||||||||||| |||||||||| |||||||    
T  51677311 agttaatcatagttgcattctaaaatgacaagattat--cctttcataaaatttgatttacaaaaagcctattccttcttttttggttacaccccaaaac 51677214  T
Q  118 ccctcttccaaaaccataattctccaa----tcgattgtgttctgcgaagatttttaaatccatactttctcacg-ccattcatgatttcaaagaaaatt 212  Q
     | ||||||||||||||||||||||||    |||||||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||    
T  51677213 tcttcttccaaaaccataattctccaaccgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaatt 51677114  T
Q  213 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttcttatgggttctc 277  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||    
T  51677113 cgaagcaaatcaggttaacaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctc 51677049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 18 - 241
Target Start/End: Original strand, 15932807 - 15933033
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaac 117  Q
    |||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||    
T  15932807 agttaatcatggttgcaccccaaaatgacaagattat--cctttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaac 15932904  T
Q  118 ccctcttccaaaaccataattctcca----atcgattgtgttctgcgaagatttttaaatccatactttctcacg-ccattcatgatttcaaagaaaatt 212  Q
    || |||||||||||||||||||||||    ||||||||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||    
T  15932905 ccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttaaaaaccatactttctcacgtccattcatgatttcaaagaaaatt 15933004  T
Q  213 cgaagcaaatcaggttagcaagtgttgtt 241  Q
    |||||||||||||||||||||||||||||    
T  15933005 cgaagcaaatcaggttagcaagtgttgtt 15933033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 20 - 238
Target Start/End: Original strand, 49823227 - 49823448
Alignment:
Q  20 ttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaaccc 119  Q
    ||||||||||||||||||||||||||||||||||  |||||| ||||||||||||||||||||||| |||||||||||| |||||||||| |||||||||    
T  49823227 ttaatcatggttgcaccccaaaatgacaagatta--cccttttataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaaccc 49823324  T
Q  120 ctcttccaaaaccataattctcca----atcgattgtgttctgcgaagatttttaaatccatactttctcacg-ccattcatgatttcaaagaaaattcg 214  Q
     |||||| ||||||||||||||||    ||||||||||||||||||||||||| ||| ||||||||| ||||| ||||||||||||||||||||||||||    
T  49823325 ttcttccgaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttttcacgtccattcatgatttcaaagaaaattcg 49823424  T
Q  215 aagcaaatcaggttagcaagtgtt 238  Q
    ||| ||||||||||||||||||||    
T  49823425 aagtaaatcaggttagcaagtgtt 49823448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 18 - 206
Target Start/End: Complemental strand, 28852982 - 28852791
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaac 117  Q
    |||||||||||||||||||| |||||||||||||||  |||||||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||    
T  28852982 agttaatcatggttgcaccctaaaatgacaagatta--ccctttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaac 28852885  T
Q  118 ccctcttccaaaaccataattctccaat----cgattgtgttctgcgaagatttttaaatccatactttctcacg-ccattcatgatttcaaag 206  Q
    || ||||||||||| |||||||||||||    ||||||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||    
T  28852884 ccttcttccaaaactataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaag 28852791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 27 - 109
Target Start/End: Original strand, 40498647 - 40498727
Alignment:
Q  27 tggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacac 109  Q
    |||||||||||||||||||||| ||||  |||||||||||||||| ||||||||||||||| |||||| ||||||||||||||    
T  40498647 tggttgcaccccaaaatgacaaaatta--ccctttcataaaatttaattttcaaaaagcatcttccttttttcttggttacac 40498727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 13240282 - 13240207
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttc 95  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||| ||  |||||||||    
T  13240282 agttaatcatggttgcaccccaaaatgacaagat--taccctttcataaaatttgattttcaaagagtctattccttc 13240207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 20 - 125
Target Start/End: Complemental strand, 29922286 - 29922183
Alignment:
Q  20 ttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaaccc 119  Q
    |||||| ||||||||||| |||||||||| ||||  |||||||||||||||| ||||||||||||  | |||||| |||||||||||||| | |||| ||    
T  29922286 ttaatcctggttgcaccctaaaatgacaaaatta--ccctttcataaaatttaattttcaaaaagactcttccttttttcttggttacaccctaaaatcc 29922189  T
Q  120 ctcttc 125  Q
    ||||||    
T  29922188 ctcttc 29922183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 20 - 109
Target Start/End: Original strand, 41712783 - 41712870
Alignment:
Q  20 ttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacac 109  Q
    |||||| |||||||||||||||||||||  |||||  |||| |||||||||| ||||||||||||||| |||||| ||||||||||||||    
T  41712783 ttaatcctggttgcaccccaaaatgacagaattat--ccttccataaaatttaattttcaaaaagcatcttccttttttcttggttacac 41712870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 20 - 109
Target Start/End: Complemental strand, 51002093 - 51002006
Alignment:
Q  20 ttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacac 109  Q
    |||||| || |||||||| |||||||||| |||||  ||||||||||||||| ||||||||||||||| |||||| ||||||||||||||    
T  51002093 ttaatcctgattgcaccctaaaatgacaaaattat--cctttcataaaatttaattttcaaaaagcatcttccttttttcttggttacac 51002006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 20 - 125
Target Start/End: Original strand, 51776052 - 51776155
Alignment:
Q  20 ttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaaccc 119  Q
    |||||| |||||||| ||||||||||||| ||||  ||||| |||||||||| ||||| ||||||||| |||||| |||||||||||||| | |||| ||    
T  51776052 ttaatcctggttgcatcccaaaatgacaaaatta--cccttccataaaatttaatttttaaaaagcatcttccttttttcttggttacaccctaaaatcc 51776149  T
Q  120 ctcttc 125  Q
    ||||||    
T  51776150 ctcttc 51776155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 21 - 121
Target Start/End: Original strand, 5672915 - 5673013
Alignment:
Q  21 taatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaacccc 120  Q
    ||||| |||||||| || |||||||||| ||||  ||||| |||||||||| ||||||||||||||| |||||| |||||||||||||||| |||| |||    
T  5672915 taatcctggttgcatcctaaaatgacaaaatta--cccttccataaaatttaattttcaaaaagcatcttccttttttcttggttacactctaaaatccc 5673012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 21 - 125
Target Start/End: Original strand, 17605751 - 17605853
Alignment:
Q  21 taatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaacccc 120  Q
    ||||| ||||||||||| |||||||||| ||||  || || |||||||||| ||||||||||||||| |||||| |||||||||||||| | |||| |||    
T  17605751 taatcctggttgcaccctaaaatgacaaaatta--cctttccataaaatttaattttcaaaaagcatcttccttttttcttggttacaccctaaaatccc 17605848  T
Q  121 tcttc 125  Q
    |||||    
T  17605849 tcttc 17605853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 20 - 125
Target Start/End: Complemental strand, 14290355 - 14290252
Alignment:
Q  20 ttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaaccc 119  Q
    |||||| ||||||||||  |||||||||| ||||  ||||| |||||||||| ||||||||||||||| || ||| |||||||||||||| | |||| ||    
T  14290355 ttaatcctggttgcaccttaaaatgacaaaatta--cccttccataaaatttaattttcaaaaagcatctttcttttttcttggttacaccctaaaatcc 14290258  T
Q  120 ctcttc 125  Q
    ||||||    
T  14290257 ctcttc 14290252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 20 - 109
Target Start/End: Original strand, 17474687 - 17474774
Alignment:
Q  20 ttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacac 109  Q
    |||||| |||||||| || |||||||||| |||||  ||||||||||||||| |||||||||||| || |||||| ||||||||||||||    
T  17474687 ttaatcctggttgcatcctaaaatgacaaaattat--cctttcataaaatttaattttcaaaaagaatcttccttttttcttggttacac 17474774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 20 - 109
Target Start/End: Complemental strand, 23444405 - 23444319
Alignment:
Q  20 ttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacac 109  Q
    |||||| ||||||||||||| |||||||| |||||  ||||||||||||||| |||||| |||||||| |||||| ||||||||||||||    
T  23444405 ttaatcttggttgcaccccacaatgacaaaattat--cctttcataaaatttaattttc-aaaagcatcttccttttttcttggttacac 23444319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 20 - 109
Target Start/End: Original strand, 26307869 - 26307956
Alignment:
Q  20 ttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacac 109  Q
    |||||| ||||||||||  |||||||||| |||||  |||| |||||||||| ||||||||||||||| |||||| ||||||||||||||    
T  26307869 ttaatcttggttgcaccttaaaatgacaaaattat--ccttccataaaatttaattttcaaaaagcatcttccttttttcttggttacac 26307956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 192 - 235
Target Start/End: Complemental strand, 13240209 - 13240166
Alignment:
Q  192 ttcatgatttcaaagaaaattcgaagcaaatcaggttagcaagt 235  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  13240209 ttcatgatttcaaagaaaattcgaagcaaatcaggttagcaagt 13240166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 109
Target Start/End: Complemental strand, 8114966 - 8114879
Alignment:
Q  20 ttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacac 109  Q
    |||||| ||||||||||| |||||||||| |||||  |||| || ||||||| ||||||||||||||| ||| || ||||||||||||||    
T  8114966 ttaatcctggttgcaccctaaaatgacaaaattat--ccttccagaaaatttaattttcaaaaagcatcttctttttttcttggttacac 8114879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 71
Target Start/End: Complemental strand, 11173563 - 11173512
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaattt 71  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  11173563 agttaatcatggttgcaccccaaaatgacaagat--taccctttcataaaattt 11173512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 71
Target Start/End: Complemental strand, 14247508 - 14247457
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaattt 71  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  14247508 agttaatcatggttgcaccccaaaatgacaagat--taccctttcataaaattt 14247457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 109
Target Start/End: Original strand, 32086505 - 32086592
Alignment:
Q  20 ttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacac 109  Q
    |||||| || ||||||||||||||||||  |||||  |||| |||||||||| |||||||||| |||| |||||| ||||||||||||||    
T  32086505 ttaatcctgattgcaccccaaaatgacagaattat--ccttccataaaatttaattttcaaaaggcatcttccttttttcttggttacac 32086592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 71
Target Start/End: Original strand, 39982284 - 39982335
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaattt 71  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  39982284 agttaatcatggttgcaccccaaaatgacaagat--taccctttcataaaattt 39982335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 71
Target Start/End: Original strand, 51290570 - 51290621
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaattt 71  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  51290570 agttaatcatggttgcaccccaaaatgacaagat--taccctttcataaaattt 51290621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 20 - 108
Target Start/End: Original strand, 35273849 - 35273935
Alignment:
Q  20 ttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttaca 108  Q
    |||||| |||||||| || |||||||||  |||||  |||| |||||||||| ||||||||||||||| |||||| |||||||||||||    
T  35273849 ttaatcctggttgcatcctaaaatgacagaattat--ccttccataaaatttaattttcaaaaagcatcttccttttttcttggttaca 35273935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 22 - 109
Target Start/End: Complemental strand, 9640951 - 9640866
Alignment:
Q  22 aatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacac 109  Q
    |||| |||||||| || |||||||||| ||||  |||||| ||||||||| ||||||||||||||| ||| || ||||||||||||||    
T  9640951 aatcctggttgcatcctaaaatgacaaaatta--cccttttataaaatttaattttcaaaaagcatcttctttttttcttggttacac 9640866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 20 - 109
Target Start/End: Original strand, 13146045 - 13146131
Alignment:
Q  20 ttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacac 109  Q
    |||||| ||||||||||| |||||||||| ||||  | ||| |||||||||  ||||||||||||||| |||||| ||||||||||||||    
T  13146045 ttaatcctggttgcaccctaaaatgacaaaatta--ctcttccataaaatta-attttcaaaaagcatcttccttttttcttggttacac 13146131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 20 - 109
Target Start/End: Complemental strand, 19247839 - 19247752
Alignment:
Q  20 ttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacac 109  Q
    |||||| |||||||| || ||||||| || ||||  ||||| |||||||||| ||||||||||||||| |||||| ||||||| ||||||    
T  19247839 ttaatcctggttgcatcctaaaatgataaaatta--cccttccataaaattttattttcaaaaagcatcttccttttttcttgattacac 19247752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 71
Target Start/End: Complemental strand, 40536851 - 40536800
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaattt 71  Q
    ||||||||||||||||||| ||||||||||||||  ||||||||||||||||||    
T  40536851 agttaatcatggttgcacctcaaaatgacaagat--taccctttcataaaattt 40536800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 125
Target Start/End: Original strand, 7009031 - 7009131
Alignment:
Q  20 ttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaaccc 119  Q
    |||||| ||||| ||||||||||| |||| ||||  |||||||||||||||| ||||| ||||||| | |||||||||  || | ||||| |||||||||    
T  7009031 ttaatcctggttacaccccaaaataacaaaatta--ccctttcataaaatttaatttt-aaaaagcctcttccttctt--ttcggtacaccccaaaaccc 7009125  T
Q  120 ctcttc 125  Q
    ||||||    
T  7009126 ctcttc 7009131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 62 - 109
Target Start/End: Complemental strand, 19514158 - 19514111
Alignment:
Q  62 cataaaatttgattttcaaaaagcatattccttctttcttggttacac 109  Q
    |||||||||| ||||||||||||||| |||||| ||||||||||||||    
T  19514158 cataaaatttaattttcaaaaagcatcttccttttttcttggttacac 19514111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 37 - 109
Target Start/End: Original strand, 12601893 - 12601963
Alignment:
Q  37 ccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacac 109  Q
    |||||||||||| ||||| |  || |||||||||| ||||||||||||||| |||||| ||| ||||||||||    
T  12601893 ccaaaatgacaaaattattc--ttccataaaatttaattttcaaaaagcatcttcctttttttttggttacac 12601963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 54 - 125
Target Start/End: Complemental strand, 24527665 - 24527597
Alignment:
Q  54 taccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaacccctcttc 125  Q
    |||| ||||||||||||| ||||| ||||||||| |||||||||   | ||||||| |||||||||||||||    
T  24527665 taccatttcataaaatttaatttt-aaaaagcatcttccttcttc--tcgttacaccccaaaacccctcttc 24527597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0391 (Bit Score: 197; Significance: 1e-107; HSPs: 1)
Name: scaffold0391
Description:

Target: scaffold0391; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 18 - 277
Target Start/End: Original strand, 3896 - 4158
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaac 117  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||    
T  3896 agttaatcatggttgcaccccaaaatgacaagatta--ccctttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaac 3993  T
Q  118 ccctcttccaaaaccataattctccaatcgat----tgtgttctgcgaagatttttaaatccatactttctcacg-ccattcatgatttcaaagaaaatt 212  Q
    || | |||||||||||||||||||||||||||    ||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||    
T  3994 ccttattccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaatt 4093  T
Q  213 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttcttatgggttctc 277  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  4094 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctc 4158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 197; Significance: 1e-107; HSPs: 49)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 18 - 277
Target Start/End: Original strand, 8376261 - 8376523
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaac 117  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||  |||||||||||| |||||||||| |||||||    
T  8376261 agttaatcatggttgcaccccaaaatgacaagatta--ccctttcataaaatttgattttcaaaaagtctattccttcttttttggttacaccccaaaac 8376358  T
Q  118 ccctcttccaaaaccataattctccaatcgat----tgtgttctgcgaagatttttaaatccatactttctcacg-ccattcatgatttcaaagaaaatt 212  Q
    || |||||||||||||||||||||||||||||    ||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||    
T  8376359 ccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaatt 8376458  T
Q  213 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttcttatgggttctc 277  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  8376459 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttctttttatgggttctc 8376523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 18 - 277
Target Start/End: Complemental strand, 26122588 - 26122326
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaac 117  Q
    |||||||||||||||||||||||||||| |||||||  ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||    
T  26122588 agttaatcatggttgcaccccaaaatgataagatta--ccctttcataaaatttgattttcaaaaagcatattccttcttttttggttacaccccaaaac 26122491  T
Q  118 ccctcttccaaaaccataattctccaatcgat----tgtgttctgcgaagatttttaaatccatactttctcacg-ccattcatgatttcaaagaaaatt 212  Q
    || |||||||||||||||||||||||||||||    ||||||||||||||||||| ||| ||||| ||||||||| ||||||||||||||||||||||||    
T  26122490 ccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccataatttctcacgtccattcatgatttcaaagaaaatt 26122391  T
Q  213 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttcttatgggttctc 277  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  26122390 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctc 26122326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 18 - 277
Target Start/End: Complemental strand, 23357319 - 23357057
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaac 117  Q
    ||||||||||||||||||||||||||||||||||||  || ||||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||    
T  23357319 agttaatcatggttgcaccccaaaatgacaagatta--ccttttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaac 23357222  T
Q  118 ccctcttccaaaaccataattctccaatcgat----tgtgttctgcgaagatttttaaatccatactttctcacgc-cattcatgatttcaaagaaaatt 212  Q
    || |||||||||||||||||||||||||||||    ||||||||||||||||||| ||| |||||||||||||||  |||||||||||||||||||||||    
T  23357221 ccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgttcattcatgatttcaaagaaaatt 23357122  T
Q  213 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttcttatgggttctc 277  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  23357121 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctc 23357057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 18 - 260
Target Start/End: Complemental strand, 3137287 - 3137042
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaac 117  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  3137287 agttaatcatggttgcaccccaaaatgacaagatta--ccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacaccccaaaac 3137190  T
Q  118 ccctcttccaaaaccataattctcc----aatcgattgtgttctgcgaagatttttaaatccatactttctcacg-ccattcatgatttcaaagaaaatt 212  Q
    |||||||| ||||||||||||||||    |||||||||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||    
T  3137189 ccctcttcgaaaaccataattctccaatcaatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaatt 3137090  T
Q  213 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttt 260  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  3137089 cgaagcaaatcaggttagcaagtcttgttcttcaatcgattgtgtttt 3137042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 18 - 264
Target Start/End: Original strand, 5988209 - 5988458
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaac 117  Q
    ||||||||||||||||||||||||||||||| ||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  5988209 agttaatcatggttgcaccccaaaatgacaatatta--ccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacatcccaaaac 5988306  T
Q  118 ccctcttccaaaaccataattctccaatc----gattgtgttctgcgaagatttttaaatccatactttctcacg-ccattcatgatttcaaagaaaatt 212  Q
    |||||||||||||||||||||||||||||    |||||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||    
T  5988307 ccctcttccaaaaccataattctccaatcgattgattgtgttctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaatt 5988406  T
Q  213 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttctt 264  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  5988407 cgaagcaaatcaggttagcaagtgttgttcttcaatcaattgtgtttttctt 5988458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 18 - 277
Target Start/End: Complemental strand, 43664387 - 43664126
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaac 117  Q
    ||||||||||||||||||| ||||||||||||||||  |||||||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||    
T  43664387 agttaatcatggttgcacctcaaaatgacaagatta--ccctttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaac 43664290  T
Q  118 ccctcttccaaaaccataattctccaatcgat---tgtgttctgcgaagatttttaaatccatactttctcacg-ccattcatgatttcaaagaaaattc 213  Q
    || ||||||||||||||||||||||||| |||   ||||||||||||||||||| ||| ||||||||||||||| |||||||||||||||||||||||||    
T  43664289 ccttcttccaaaaccataattctccaattgatgattgtgttctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaattc 43664190  T
Q  214 gaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttcttatgggttctc 277  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||    
T  43664189 gaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttgtgggttctc 43664126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 18 - 277
Target Start/End: Complemental strand, 24822786 - 24822524
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaac 117  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||    
T  24822786 agttaatcatggttgcaccccaaaatgacaagatta--ccctttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaac 24822689  T
Q  118 ccctcttccaaaaccataattctccaatcgattg----tgttctgcgaagatttttaaatccatactttctcacg-ccattcatgatttcaaagaaaatt 212  Q
    |  ||||||||||||||||||||||||||||| |    ||||||||||||||||| ||| ||||| ||||||||| ||||||||||||||||||||||||    
T  24822688 cattcttccaaaaccataattctccaatcgatcgatggtgttctgcgaagattttcaaaaccataatttctcacgtccattcatgatttcaaagaaaatt 24822589  T
Q  213 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttcttatgggttctc 277  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  24822588 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttctttttatgggttctc 24822524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 18 - 277
Target Start/End: Original strand, 35605358 - 35605620
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaac 117  Q
    ||||||||||||||||||| ||||||||||||||||  |||||||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||    
T  35605358 agttaatcatggttgcacctcaaaatgacaagatta--ccctttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaac 35605455  T
Q  118 ccctcttccaaaaccataattctccaatcgat----tgtgttctgcgaagatttttaaatccatactttctcacg-ccattcatgatttcaaagaaaatt 212  Q
    || |||||||||||||||||||||||||||||    |||| |||||||||||||| ||| ||||||||||||| | ||||||||||||||||||||||||    
T  35605456 ccttcttccaaaaccataattctccaatcgatcgattgtgctctgcgaagattttcaaaaccatactttctcatgtccattcatgatttcaaagaaaatt 35605555  T
Q  213 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttcttatgggttctc 277  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  35605556 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgagttctc 35605620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 18 - 277
Target Start/End: Original strand, 39365267 - 39365528
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaac 117  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||    
T  39365267 agttaatcatggttgcaccccaaaatgacaagatta--ccctttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaac 39365364  T
Q  118 ccctcttccaaaaccataattctcca----atcgattgtgttctgcgaagatttttaaatccatactttctcacg-ccattcatgatttcaaagaaaatt 212  Q
    || |||||||||||||||||||||||    ||||||||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||    
T  39365365 ccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaatt 39365464  T
Q  213 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttcttatgggttctc 277  Q
    |||||||||||||||||||||||||||||||||||| || |||| ||||||| ||||||||||||    
T  39365465 cgaagcaaatcaggttagcaagtgttgttcttcaattgactgtg-ttttcttgttatgggttctc 39365528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 18 - 277
Target Start/End: Original strand, 42512180 - 42512442
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaac 117  Q
    ||||||||||||||||| ||||||||||||||||||  |||||||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||    
T  42512180 agttaatcatggttgcatcccaaaatgacaagatta--ccctttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaac 42512277  T
Q  118 ccctcttccaaaaccataattctccaatcgat----tgtgttctgcgaagatttttaaatccatactttctcacg-ccattcatgatttcaaagaaaatt 212  Q
    |||||||||||||  |||||||||||||||||    |||||||| |||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||    
T  42512278 ccctcttccaaaattataattctccaatcgatcgattgtgttctccgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaatt 42512377  T
Q  213 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttcttatgggttctc 277  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  42512378 cgaagcaaatcaagttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctc 42512442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 181; E-Value: 8e-98
Query Start/End: Original strand, 18 - 277
Target Start/End: Complemental strand, 26290841 - 26290579
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaac 117  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||  ||||||||||| |||||||||| ||||||     
T  26290841 agttaatcatggttgcaccccaaaatgacaagatta--ccctttcataaaatttgattttcaaaaagcccattccttcttttttggttacaccccaaaat 26290744  T
Q  118 ccctcttccaaaaccataattctccaatcgat----tgtgttctgcgaagatttttaaatccatactttctcacg-ccattcatgatttcaaagaaaatt 212  Q
    || |||||||||||||||||||||||||||||    ||||||||||| ||||||| ||| ||||||||||||||| ||||||||||||||||||||||||    
T  26290743 ccttcttccaaaaccataattctccaatcgatcgattgtgttctgcggagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaatt 26290644  T
Q  213 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttcttatgggttctc 277  Q
    |||||||||||||||||| |||||||||||||||||||||||| |||||||| ||||||||||||    
T  26290643 cgaagcaaatcaggttagaaagtgttgttcttcaatcgattgtttttttcttgttatgggttctc 26290579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 181; E-Value: 8e-98
Query Start/End: Original strand, 18 - 277
Target Start/End: Complemental strand, 26304098 - 26303836
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaac 117  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||  ||||||||||| |||||||||| ||||||     
T  26304098 agttaatcatggttgcaccccaaaatgacaagatta--ccctttcataaaatttgattttcaaaaagcccattccttcttttttggttacaccccaaaat 26304001  T
Q  118 ccctcttccaaaaccataattctccaatcgat----tgtgttctgcgaagatttttaaatccatactttctcacg-ccattcatgatttcaaagaaaatt 212  Q
    || |||||||||||||||||||||||||||||    ||||||||||| ||||||| ||| ||||||||||||||| ||||||||||||||||||||||||    
T  26304000 ccttcttccaaaaccataattctccaatcgatcgattgtgttctgcggagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaatt 26303901  T
Q  213 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttcttatgggttctc 277  Q
    |||||||||||||||||| |||||||||||||||||||||||| |||||||| ||||||||||||    
T  26303900 cgaagcaaatcaggttagaaagtgttgttcttcaatcgattgtttttttcttgttatgggttctc 26303836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 181; E-Value: 8e-98
Query Start/End: Original strand, 18 - 277
Target Start/End: Complemental strand, 34565091 - 34564829
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaac 117  Q
    |||||||||||||||||||||||||||||||||||||  ||||| ||||||||||||||||||||||| |||||||||||| || ||||||| |||||||    
T  34565091 agttaatcatggttgcaccccaaaatgacaagattat--ccttttataaaatttgattttcaaaaagcctattccttctttttttgttacaccccaaaac 34564994  T
Q  118 ccctcttccaaaaccataattctccaatcgat----tgtgttctgcgaagatttttaaatccatactttctcacg-ccattcatgatttcaaagaaaatt 212  Q
    || |||||||||| ||||||||||||||||||    ||| ||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||    
T  34564993 ccttcttccaaaatcataattctccaatcgatcgattgtattctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaatt 34564894  T
Q  213 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttcttatgggttctc 277  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||    
T  34564893 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgttttttttgttatgggttctc 34564829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 18 - 277
Target Start/End: Complemental strand, 26337453 - 26337191
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaac 117  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||  ||||||||||| |||||||||| ||||||     
T  26337453 agttaatcatggttgcaccccaaaatgacaagatta--ccctttcataaaatttgattttcaaaaagcccattccttcttttttggttacaccccaaaat 26337356  T
Q  118 ccctcttccaaaaccataattctccaatcgat----tgtgttctgcgaagatttttaaatccatactttctcacg-ccattcatgatttcaaagaaaatt 212  Q
    || |||||||||||||||||||||||||||||    ||||||||||| ||||||| ||| ||||||||||||||| ||||||||||||||||||||||||    
T  26337355 ccttcttccaaaaccataattctccaatcgatcgattgtgttctgcggagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaatt 26337256  T
Q  213 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttcttatgggttctc 277  Q
    |||||||||||||||||| |||||||||||||||||||||||| |||||||| |||||| |||||    
T  26337255 cgaagcaaatcaggttagaaagtgttgttcttcaatcgattgtttttttcttgttatggattctc 26337191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 176; E-Value: 7e-95
Query Start/End: Original strand, 18 - 260
Target Start/End: Complemental strand, 3032960 - 3032715
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaac 117  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||||| |||||||||||||||||| |||| ||||||| |||||||||| |||||||    
T  3032960 agttaatcatggttgcaccccaaaatgacaagatta--ccctttcataacatttgattttcaaaaagcctatttcttcttttttggttacaccccaaaac 3032863  T
Q  118 ccctcttccaaaaccataattctccaat----cgattgtgttctgcgaagatttttaaatccatactttctcacg-ccattcatgatttcaaagaaaatt 212  Q
    || |||||||||||||||||||||||||    ||||||||||||||||||||||| ||| |||||||||||||||  |||||||||||||||||||||||    
T  3032862 ccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgttcattcatgatttcaaagaaaatt 3032763  T
Q  213 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttt 260  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  3032762 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttt 3032715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 18 - 251
Target Start/End: Original strand, 17122111 - 17122347
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaac 117  Q
    |||||||||||||||||||||||||| |||||||||  |||||||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||    
T  17122111 agttaatcatggttgcaccccaaaataacaagatta--ccctttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaac 17122208  T
Q  118 ccctcttccaaaaccataattctcca----atcgattgtgttctgcgaagatttttaaatccatactttctcacg-ccattcatgatttcaaagaaaatt 212  Q
    || |||||||||||||||||||||||    ||||||||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||    
T  17122209 ccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaatt 17122308  T
Q  213 cgaagcaaatcaggttagcaagtgttgttcttcaatcga 251  Q
    |||||||||||||||||||||||||||||||||||||||    
T  17122309 cgaagcaaatcaggttagcaagtgttgttcttcaatcga 17122347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 18 - 247
Target Start/End: Original strand, 34917559 - 34917791
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaac 117  Q
    |||||||||||| |||||||||||||||||||||||  |||||||||||||||||||||||||||||  |||||||||||| |||||||||| |||||||    
T  34917559 agttaatcatggatgcaccccaaaatgacaagatta--ccctttcataaaatttgattttcaaaaagtctattccttcttttttggttacaccccaaaac 34917656  T
Q  118 ccctcttccaaaaccataattctccaatcg----attgtgttctgcgaagatttttaaatccatactttctcacg-ccattcatgatttcaaagaaaatt 212  Q
    || |||||||||||||||||||||||||||    ||||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||    
T  34917657 ccttcttccaaaaccataattctccaatcgatcaattgtgttctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaatt 34917756  T
Q  213 cgaagcaaatcaggttagcaagtgttgttcttcaa 247  Q
    |||||||||||||||||||||||||||||||||||    
T  34917757 cgaagcaaatcaggttagcaagtgttgttcttcaa 34917791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 18 - 255
Target Start/End: Original strand, 8656575 - 8656815
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaac 117  Q
    ||||||||||||||||| || |||||||||||||||   ||||||||||||||||||||||||||||  |||||||||||| |||||||||| |||||||    
T  8656575 agttaatcatggttgcaaccaaaaatgacaagattaa--cctttcataaaatttgattttcaaaaagtctattccttcttttttggttacaccccaaaac 8656672  T
Q  118 ccctcttccaaaaccataattctcca----atcgattgtgttctgcgaagatttttaaatccatactttctcacg-ccattcatgatttcaaagaaaatt 212  Q
    || | |||||||||||||||||||||    ||||||||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||    
T  8656673 ccttattccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaatt 8656772  T
Q  213 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgt 255  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  8656773 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgt 8656815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 18 - 216
Target Start/End: Complemental strand, 22439668 - 22439467
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaac 117  Q
    |||||||||||||| |||| ||||||||||||||||  |||||||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||    
T  22439668 agttaatcatggttacacctcaaaatgacaagatta--ccctttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaac 22439571  T
Q  118 ccctcttccaaaaccataattctccaat----cgattgtgttctgcgaagatttttaaatccatactttctcacg-ccattcatgatttcaaagaaaatt 212  Q
    || |||||||||||||||||||||||||    ||||||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||    
T  22439570 ccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaatt 22439471  T
Q  213 cgaa 216  Q
    ||||    
T  22439470 cgaa 22439467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 20 - 125
Target Start/End: Original strand, 12722579 - 12722682
Alignment:
Q  20 ttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaaccc 119  Q
    |||||| |||||||||||||||||||||| ||||  ||||| |||||||||| ||||||||||||||| ||| || |||||||||||||| | |||| ||    
T  12722579 ttaatcctggttgcaccccaaaatgacaaaatta--cccttccataaaatttaattttcaaaaagcatcttcattttttcttggttacaccctaaaatcc 12722676  T
Q  120 ctcttc 125  Q
    ||||||    
T  12722677 ctcttc 12722682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 20 - 109
Target Start/End: Complemental strand, 31793910 - 31793823
Alignment:
Q  20 ttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacac 109  Q
    |||||| |||||||||||||||||||||| ||||  ||||| |||||||||| ||||||||||||||| |||||| ||||||||||||||    
T  31793910 ttaatcctggttgcaccccaaaatgacaaaatta--cccttccataaaatttaattttcaaaaagcatcttccttttttcttggttacac 31793823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 197 - 275
Target Start/End: Complemental strand, 2828232 - 2828154
Alignment:
Q  197 gatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttcttatgggttc 275  Q
    |||||||||||||||||||||||||| |||||| |||||  |||||||| |||||||||||||||||| | ||||||||    
T  2828232 gatttcaaagaaaattcgaagcaaataaggttaacaagttgtgttcttcgatcgattgtgtttttcttgtcatgggttc 2828154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 20 - 125
Target Start/End: Complemental strand, 41942422 - 41942319
Alignment:
Q  20 ttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaaccc 119  Q
    |||||| |||||||| ||||||||||||| |||||  |||| |||||||||| ||||||||||||||| || ||| |||||||||||||| | |||| ||    
T  41942422 ttaatcctggttgcatcccaaaatgacaaaattat--ccttccataaaatttaattttcaaaaagcatcttacttttttcttggttacaccctaaaatcc 41942325  T
Q  120 ctcttc 125  Q
    ||||||    
T  41942324 ctcttc 41942319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 20 - 109
Target Start/End: Complemental strand, 42688002 - 42687915
Alignment:
Q  20 ttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacac 109  Q
    |||||| |||||||||||||||||||||| ||||  ||||| |||||||||| ||||| ||||||||| |||||| ||||||||||||||    
T  42688002 ttaatcttggttgcaccccaaaatgacaaaatta--cccttccataaaatttaatttttaaaaagcatcttccttttttcttggttacac 42687915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 27 - 109
Target Start/End: Complemental strand, 36057786 - 36057706
Alignment:
Q  27 tggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacac 109  Q
    |||||||||||||||||||||  |||||  |||| |||||||||| ||||||||||||||| |||||| ||||||||||||||    
T  36057786 tggttgcaccccaaaatgacagaattat--ccttccataaaatttaattttcaaaaagcatcttccttttttcttggttacac 36057706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 27 - 109
Target Start/End: Complemental strand, 38168539 - 38168459
Alignment:
Q  27 tggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacac 109  Q
    ||||||||| ||||||||| || ||||  ||||| |||||||||| |||||||||||||||||||||| ||||||||||||||    
T  38168539 tggttgcactccaaaatgataaaatta--cccttccataaaatttaattttcaaaaagcatattccttttttcttggttacac 38168459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 20 - 125
Target Start/End: Original strand, 11266156 - 11266259
Alignment:
Q  20 ttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaaccc 119  Q
    |||||| |||||||||| |||||||| |||||||  | |||  ||||||||| ||||||||||||||| |||||| |||||||||||||| | |||| ||    
T  11266156 ttaatcctggttgcacctcaaaatgataagatta--ctcttctataaaatttaattttcaaaaagcatcttccttttttcttggttacaccctaaaatcc 11266253  T
Q  120 ctcttc 125  Q
    ||||||    
T  11266254 ctcttc 11266259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 20 - 125
Target Start/End: Original strand, 38945711 - 38945811
Alignment:
Q  20 ttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaaccc 119  Q
    |||||| ||||||||||| |||||||||| |||||  |||| |||||||||| ||||||||||||||   ||||| |||||||||||||||| ||||  |    
T  38945711 ttaatcctggttgcaccctaaaatgacaaaattat--ccttccataaaatttaattttcaaaaagca---tccttttttcttggttacactctaaaattc 38945805  T
Q  120 ctcttc 125  Q
    ||||||    
T  38945806 ctcttc 38945811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 71
Target Start/End: Original strand, 15839476 - 15839527
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaattt 71  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  15839476 agttaatcatggttgcaccccaaaatgacaagat--taccctttcataaaattt 15839527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 71
Target Start/End: Original strand, 17601355 - 17601406
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaattt 71  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  17601355 agttaatcatggttgcaccccaaaatgacaagat--taccctttcataaaattt 17601406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 71
Target Start/End: Complemental strand, 28885774 - 28885723
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaattt 71  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  28885774 agttaatcatggttgcaccccaaaatgacaagat--taccctttcataaaattt 28885723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 71
Target Start/End: Original strand, 28909683 - 28909734
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaattt 71  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  28909683 agttaatcatggttgcaccccaaaatgacaagat--taccctttcataaaattt 28909734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 20 - 71
Target Start/End: Original strand, 11587921 - 11587970
Alignment:
Q  20 ttaatcatggttgcaccccaaaatgacaagattataccctttcataaaattt 71  Q
    ||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  11587921 ttaatcatggttgcaccccaaaatgacaagat--taccctttcataaaattt 11587970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 81
Target Start/End: Complemental strand, 12713639 - 12713578
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaa 81  Q
    ||||||||||||||||||||||||||||||| ||  |||| ||| |||||||||||||||||||    
T  12713639 agttaatcatggttgcaccccaaaatgacaatat--tacctttttataaaatttgattttcaaa 12713578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 54 - 125
Target Start/End: Original strand, 4005820 - 4005891
Alignment:
Q  54 taccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaacccctcttc 125  Q
    ||||||| |||||||||| ||||||||||||||| |||||| ||||||||||| || | |||| ||||||||    
T  4005820 tacccttccataaaatttaattttcaaaaagcatcttccttttttcttggttataccctaaaatccctcttc 4005891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 197 - 263
Target Start/End: Complemental strand, 7969938 - 7969872
Alignment:
Q  197 gatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttct 263  Q
    ||||||||||||||||||||| | || ||||||| ||||  |||||||||||||||| |||||||||    
T  7969938 gatttcaaagaaaattcgaaggagatgaggttagtaagttgtgttcttcaatcgattatgtttttct 7969872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 71
Target Start/End: Complemental strand, 8013987 - 8013936
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaattt 71  Q
    |||||||||||||||||| |||||||||||||||  ||||||||||||||||||    
T  8013987 agttaatcatggttgcactccaaaatgacaagat--taccctttcataaaattt 8013936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 71
Target Start/End: Original strand, 37578004 - 37578055
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaattt 71  Q
    |||||||||||||||||| |||||||||||||||  ||||||||||||||||||    
T  37578004 agttaatcatggttgcactccaaaatgacaagat--taccctttcataaaattt 37578055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 33 - 125
Target Start/End: Complemental strand, 7970081 - 7969992
Alignment:
Q  33 caccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaacccctcttc 125  Q
    ||||| |||||||||| ||||  || ||||||||||||| ||||| ||||||  | |||||||||||||||||||||  ||||||||||||||    
T  7970081 caccctaaaatgacaaaatta--ccttttcataaaattt-atttttaaaaagtcttttccttctttcttggttacacctcaaaacccctcttc 7969992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 39 - 109
Target Start/End: Original strand, 5552 - 5620
Alignment:
Q  39 aaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacac 109  Q
    |||||||||| |||||  |||| |||||||||| |||||||||||| || |||||| ||||||||||||||    
T  5552 aaaatgacaaaattat--ccttccataaaatttaattttcaaaaagtatcttccttttttcttggttacac 5620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 109
Target Start/End: Original strand, 4229659 - 4229746
Alignment:
Q  20 ttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacac 109  Q
    |||||| ||||||||   ||||||||||  |||||  |||| |||||||||| ||||||||||| ||| |||||| ||||||||||||||    
T  4229659 ttaatcctggttgcatttcaaaatgacagaattat--ccttccataaaatttaattttcaaaaaacatcttccttttttcttggttacac 4229746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 54 - 124
Target Start/End: Complemental strand, 5347506 - 5347437
Alignment:
Q  54 taccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaacccctctt 124  Q
    |||||||||||||||||| | ||||||||||| | |||||| ||| | |||||||| ||||||||||||||    
T  5347506 taccctttcataaaatttaagtttcaaaaagcctcttcctt-tttatcggttacaccccaaaacccctctt 5347437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 71
Target Start/End: Complemental strand, 5599923 - 5599872
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaattt 71  Q
    |||||||||||||||||  |||||||||||||||  ||||||||||||||||||    
T  5599923 agttaatcatggttgcattccaaaatgacaagat--taccctttcataaaattt 5599872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 71
Target Start/End: Original strand, 5640697 - 5640748
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaattt 71  Q
    |||||||||||||||||  |||||||||||||||  ||||||||||||||||||    
T  5640697 agttaatcatggttgcattccaaaatgacaagat--taccctttcataaaattt 5640748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 125
Target Start/End: Original strand, 38234440 - 38234543
Alignment:
Q  20 ttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaaccc 119  Q
    |||||| || ||||||  ||||||||||| || ||  |||| |||||||||| ||||| ||||||||| || ||| |||||||||||||||  |||| ||    
T  38234440 ttaatcctgtttgcacttcaaaatgacaaaatgat--ccttccataaaatttaatttttaaaaagcatctttcttttttcttggttacactataaaatcc 38234537  T
Q  120 ctcttc 125  Q
    ||||||    
T  38234538 ctcttc 38234543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 54 - 108
Target Start/End: Original strand, 44025627 - 44025681
Alignment:
Q  54 taccctttcataaaatttgattttcaaaaagcatattccttctttcttggttaca 108  Q
    ||||||| |||||||||  ||||||||||||||| |||||| |||||||||||||    
T  44025627 tacccttccataaaattaaattttcaaaaagcattttccttttttcttggttaca 44025681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 122
Target Start/End: Complemental strand, 16571278 - 16571211
Alignment:
Q  54 taccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaacccctc 122  Q
    |||||||||||||| ||| ||||| |||||||   ||||||||||||||||||||| | ||||||||||    
T  16571278 taccctttcataaagttt-atttttaaaaagctgtttccttctttcttggttacacccgaaaacccctc 16571211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 125
Target Start/End: Complemental strand, 38460162 - 38460060
Alignment:
Q  20 ttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaaccc 119  Q
    |||||| |||||||||| ||||||||||| ||  |||||||  |||||| || |||||| |||||||| |||||| ||| || ||||||| | |||| ||    
T  38460162 ttaatcctggttgcacctcaaaatgacaaaat--tacccttctataaaa-ttaattttcgaaaagcatcttccttttttttttgttacaccctaaaatcc 38460066  T
Q  120 ctcttc 125  Q
    ||||||    
T  38460065 ctcttc 38460060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 87
Target Start/End: Complemental strand, 35329787 - 35329723
Alignment:
Q  20 ttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcat 87  Q
    |||||| ||||||||| |||||||||||| |||||  |||| ||||||| || |||||||||||||||    
T  35329787 ttaatcctggttgcactccaaaatgacaaaattat--ccttccataaaa-ttaattttcaaaaagcat 35329723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0368 (Bit Score: 190; Significance: 1e-103; HSPs: 1)
Name: scaffold0368
Description:

Target: scaffold0368; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 18 - 277
Target Start/End: Original strand, 13883 - 14146
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaac 117  Q
    |||||||||||||||||||| |||||||||||||||  |||||||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||    
T  13883 agttaatcatggttgcaccctaaaatgacaagatta--ccctttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaac 13980  T
Q  118 ccctcttccaaaaccataattctcca----atcgattgtgttctgcgaagatttttaaatccatactttctcacg-ccattcatgatttcaaagaaaatt 212  Q
    || |||||||||||||||||||||||    ||||||||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||    
T  13981 ccttcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaatt 14080  T
Q  213 cgaagcaaatcaggttagcaagtgttgttcttc-aatcgattgtgtttttcttcttatgggttctc 277  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  14081 cgaagcaaatcaggttagcaagtgttgttcttcaaatcgattgtgtttttcttgttatgggttctc 14146  T

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Target: scaffold0438 (Bit Score: 181; Significance: 8e-98; HSPs: 1)
Name: scaffold0438
Description:

Target: scaffold0438; HSP #1
Raw Score: 181; E-Value: 8e-98
Query Start/End: Original strand, 18 - 277
Target Start/End: Complemental strand, 2178 - 1916
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaac 117  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||  ||||||||||| |||||||||| ||||||     
T  2178 agttaatcatggttgcaccccaaaatgacaagatta--ccctttcataaaatttgattttcaaaaagcccattccttcttttttggttacaccccaaaat 2081  T
Q  118 ccctcttccaaaaccataattctccaatcgat----tgtgttctgcgaagatttttaaatccatactttctcacg-ccattcatgatttcaaagaaaatt 212  Q
    || |||||||||||||||||||||||||||||    ||||||||||| ||||||| ||| ||||||||||||||| ||||||||||||||||||||||||    
T  2080 ccttcttccaaaaccataattctccaatcgatcgattgtgttctgcggagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaatt 1981  T
Q  213 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttcttatgggttctc 277  Q
    |||||||||||||||||| |||||||||||||||||||||||| |||||||| ||||||||||||    
T  1980 cgaagcaaatcaggttagaaagtgttgttcttcaatcgattgtttttttcttgttatgggttctc 1916  T

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Target: scaffold0007 (Bit Score: 173; Significance: 5e-93; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 173; E-Value: 5e-93
Query Start/End: Original strand, 18 - 277
Target Start/End: Complemental strand, 157178 - 156917
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaac 117  Q
    |||||||||||||||||||  |||||||||||||||  |||||||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||    
T  157178 agttaatcatggttgcaccaaaaaatgacaagatta--ccctttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaac 157081  T
Q  118 ccctcttccaaaaccataattctccaatcg----attgtgttctgcgaagatttttaaatccatactttctcacg-ccattcatgatttcaaagaaaatt 212  Q
    || |||||||||||||||||||||||||||    ||||||||||||||||||||| ||| ||||||||||||||| |||||||||||||  |||||||||    
T  157080 ccttcttccaaaaccataattctccaatcgatcaattgtgttctgcgaagattttcaaaaccatactttctcacgtccattcatgattttcaagaaaatt 156981  T
Q  213 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttcttatgggttctc 277  Q
    |||||||||||||||||||||||||||||||||||||||||| | ||||||| ||||||||||||    
T  156980 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgcg-ttttcttgttatgggttctc 156917  T

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Target: scaffold0007; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 20 - 109
Target Start/End: Original strand, 200056 - 200143
Alignment:
Q  20 ttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacac 109  Q
    |||||| ||| |||| ||||||||||||| ||||  ||||| |||||||||| ||||||||||| ||| |||||| |||||||| |||||    
T  200056 ttaatcctggatgcatcccaaaatgacaaaatta--cccttccataaaatttaattttcaaaaaacatcttccttttttcttggctacac 200143  T

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Target: scaffold0276 (Bit Score: 169; Significance: 1e-90; HSPs: 2)
Name: scaffold0276
Description:

Target: scaffold0276; HSP #1
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 18 - 277
Target Start/End: Complemental strand, 14112 - 13851
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaac 117  Q
    |||||||||||||||||||||||||| | ||||||||  ||||||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||    
T  14112 agttaatcatggttgcaccccaaaattataagattat--cctttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaac 14015  T
Q  118 ccctcttccaaaaccataattctccaatc----gattgtgttctgcgaagatttttaaatccatactttctcacg-ccattcatgatttcaaagaaaatt 212  Q
    || | ||||||||| |||||||| |||||    |||||||||||||||||||||| |||  |||||||||||||| ||||||||||||||||||||||||    
T  14014 cctttttccaaaacgataattcttcaatccatcgattgtgttctgcgaagattttcaaaagcatactttctcacgtccattcatgatttcaaagaaaatt 13915  T
Q  213 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttcttatgggttctc 277  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||    
T  13914 cgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgttttt-ttgttatgggttctc 13851  T

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Target: scaffold0276; HSP #2
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 18 - 244
Target Start/End: Original strand, 12541 - 12770
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaac 117  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| |||||||||||| |||||||||| |||||||    
T  12541 agttaatcatggttgcaccccaaaatgacaagatta--ccctttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaac 12638  T
Q  118 ccctcttccaaaaccataattctcca----atcgattgtgttctgcgaagatttttaaatccatactttctcacg-ccattcatgatttcaaagaaaatt 212  Q
    || |||||||||||||||||||| ||    ||||||||||||||||||||||||| |||  |||||||||||||| ||||||||||||||||||||||||    
T  12639 ccttcttccaaaaccataattcttcaatccatcgattgtgttctgcgaagattttcaaaagcatactttctcacgtccattcatgatttcaaagaaaatt 12738  T
Q  213 cgaagcaaatcaggttagcaagtgttgttctt 244  Q
    ||||||||||||||||||||||||||||||||    
T  12739 cgaagcaaatcaggttagcaagtgttgttctt 12770  T

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Target: scaffold0248 (Bit Score: 119; Significance: 8e-61; HSPs: 1)
Name: scaffold0248
Description:

Target: scaffold0248; HSP #1
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 18 - 188
Target Start/End: Complemental strand, 3087 - 2915
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaac 117  Q
    ||||||||||||||||||||||||||||||| ||||  |||||| ||||||||||||||||||||||||||||||| ||||| ||||||||| |||||||    
T  3087 agttaatcatggttgcaccccaaaatgacaatatta--cccttttataaaatttgattttcaaaaagcatattcctcctttcatggttacaccccaaaac 2990  T
Q  118 ccctcttccaaaaccataattctccaat----cgattgtgttctgcgaagatttttaaatccatactttctcacg 188  Q
    ||||||||||||||||||||||||||||    ||||||||||||||||||||||| ||| |||||||||||||||    
T  2989 ccctcttccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacg 2915  T

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Target: scaffold0896 (Bit Score: 56; Significance: 3e-23; HSPs: 2)
Name: scaffold0896
Description:

Target: scaffold0896; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 27 - 125
Target Start/End: Complemental strand, 3804 - 3708
Alignment:
Q  27 tggttgcaccccaaaatgacaagattataccctttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaacccctcttc 125  Q
    ||||| ||||||||||||| || |||||  |||| |||||||||||||||| ||||||||| |||||| |||||||||||||||||||||||| |||||    
T  3804 tggttacaccccaaaatgataaaattat--ccttacataaaatttgattttgaaaaagcatcttccttttttcttggttacactccaaaacccttcttc 3708  T

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Target: scaffold0896; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 198 - 275
Target Start/End: Complemental strand, 3651 - 3575
Alignment:
Q  198 atttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttcttatgggttc 275  Q
    |||||||||||  ||| |||||||| ||||||||||||  | |||||||||| ||| |||||||||| ||||||||||    
T  3651 atttcaaagaat-ttcaaagcaaataaggttagcaagttgtattcttcaatcaattatgtttttcttgttatgggttc 3575  T

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Target: scaffold0003 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 62 - 125
Target Start/End: Complemental strand, 365872 - 365809
Alignment:
Q  62 cataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaacccctcttc 125  Q
    |||||||||| ||||||||||||||| |||||| |||||||||||||| | |||| ||||||||    
T  365872 cataaaatttaattttcaaaaagcatcttccttttttcttggttacaccctaaaatccctcttc 365809  T

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Target: scaffold0065 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 71
Target Start/End: Complemental strand, 38475 - 38424
Alignment:
Q  18 agttaatcatggttgcaccccaaaatgacaagattataccctttcataaaattt 71  Q
    |||||||||||||||||| |||||||||||||||  ||||||||||||||||||    
T  38475 agttaatcatggttgcactccaaaatgacaagat--taccctttcataaaattt 38424  T

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Target: scaffold0578 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0578
Description:

Target: scaffold0578; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 62 - 109
Target Start/End: Original strand, 8781 - 8828
Alignment:
Q  62 cataaaatttgattttcaaaaagcatattccttctttcttggttacac 109  Q
    |||||||||| ||||||||||||||| |||||| ||||||||||||||    
T  8781 cataaaatttaattttcaaaaagcatcttccttttttcttggttacac 8828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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