View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13149_low_16 (Length: 323)
Name: NF13149_low_16
Description: NF13149
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13149_low_16 |
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Alignment Details
Target: chr3 (Bit Score: 280; Significance: 1e-157; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 280; E-Value: 1e-157
Query Start/End: Original strand, 12 - 307
Target Start/End: Original strand, 3604878 - 3605173
Alignment:
| Q |
12 |
atcatcaaccatctctttttctcctaaatattccattgaatttggtgtcattttcaaccaatgatggcagctaatctcattaccacatatattggatcca |
111 |
Q |
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| T |
3604878 |
atcatcaaccatctctttttctcctaaatattccattgaatttggtgtcattttcaaccaatgatagcagctaatcccattaccacatatattggatcca |
3604977 |
T |
|
| Q |
112 |
gtgatcagacttgttcaactgacaatgatacaagattcaattgaaaatgatttgaacttgctggaataaaagcaccttcatcattgttatgttttaagaa |
211 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3604978 |
gtgatcagacttgttcaactgacaatgatacaagattcaattgaaaatgatttgaacttgctggaataaaagcaccttcatcattgttatgttttaagaa |
3605077 |
T |
|
| Q |
212 |
actaaaatttagattatggtagattagagattttcgagtttaaactcaagtcacattgaggggaagatcataccatatgtgtctatggattttttg |
307 |
Q |
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||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
3605078 |
actaaaatttagattatggtagattagagatcttcgagtttaaactcaagtcacattgaggggaagatcataccatatgtgtctatggaatttttg |
3605173 |
T |
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