View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1314_high_130 (Length: 232)
Name: NF1314_high_130
Description: NF1314
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1314_high_130 |
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Alignment Details
Target: chr8 (Bit Score: 117; Significance: 9e-60; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 2252446 - 2252322
Alignment:
| Q |
1 |
gcgaaagttaattagcatcgccatatggagagacgtgaagtttcataaatggccacaatacatgagtcgttttctcatgccccattagtgttcctttaaa |
100 |
Q |
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| T |
2252446 |
gcgaaagttaattagcatcgccatatggagagacgtgaagtttcataaatggccacaatacatgagtcgttttctcatgcccaattagtgttcctttaaa |
2252347 |
T |
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| Q |
101 |
taatgctatataattccccgttagt |
125 |
Q |
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|||||||||||||| |||||||||| |
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| T |
2252346 |
taatgctatataatgccccgttagt |
2252322 |
T |
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